| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2775877 | NA (NA) | 25 (0.940) | 18/278 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3048489 = | 0 (0.000) | intergenic (‑318/+37) | yghK/glcB | glycolate transporter/malate synthase | |||||
ACACGCAGACGCAGAGTATCGTTAAGATGTCCATATTGTTGTTTTAGGCCCGCTAGTAATGCGCTACGGGTATTTAATATTGTTAAACCCTGATAATCGCTCCGGTTATTTCCGGGATAAATGTACTACCGCAGTTACTATCATAGCCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAATCGCTGGCAGCTTTAAAAGCAC > REL606/3048342‑3048635 | caccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaccc > 2:163935‑M2/148‑150 (MQ=255) gccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAAc < 2:10378‑M2/14‑1 (MQ=255) aagagacagatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAAc < 1:118860‑M2/14‑1 (MQ=255) atcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGacaataaaacctgtctctt > 2:119208‑M2/128‑141 (MQ=255) gttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTaa > 2:234548‑M2/110‑150 (MQ=255) tgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATg < 2:306559‑M2/43‑1 (MQ=255) gtagtgattcacgacttcaaggcgcttttcaacggggtattttggctttggcatattaggggctattccatttgatcgtcctacacaatgggtgcagcacaACCGACAATAAAACTTGTCGGGGCTTTTTTGACGTTATTAACAActttc > 1:427617‑M2/102‑150 (MQ=255) tgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCtttt > 2:434445‑M2/98‑150 (MQ=255) tttcaaaagggtattttggctttgacatattaggggctattccctttcatcgtccaacaatatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTGTTGCCGCTATTCATGCCTTTCTTTTTCGCGTAAACGCCAGGCGTGta > 1:575653‑M2/76‑150 (MQ=255) ttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGtat < 2:137580‑M2/90‑1 (MQ=255) ttggctttgacatagtaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAACACTTGCCGGGGCGTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGTCGTGTAATAACGGTTCGGtat < 1:301711‑M2/90‑1 (MQ=255) gtgggtttgacgtatttggggctattccatttcatcgtccaaccaaatgggtgcagtacaCCCTACAATAAAGCTTGCCGGGGCTTGTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAAGAACGGTTCGGtat < 1:386373‑M2/90‑1 (MQ=255) tttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATTgcct > 1:347930‑M2/56‑149 (MQ=255) gagacagtattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCg < 2:411051‑M2/95‑1 (MQ=255) tgaaatattagtggctattccagttcatcttacaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGtt < 1:286819‑M2/97‑1 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGtatagccgctgtctc > 1:409873‑M2/49‑143 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCt > 2:571871‑M2/49‑150 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCt > 2:633911‑M2/49‑150 (MQ=255) attagggtctattccatttcatcgtcaaacaaaatgtgtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTGTTGACGCGATTAACTACTTTCTTTTTCGCGTAAACGCCAGGCCTGTCATAACGGTTCAGTATAGCCGTCTAGCTg > 1:232413‑M2/48‑150 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTg > 1:41076‑M2/48‑150 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTcat > 1:493274‑M2/42‑149 (MQ=255) gtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAAt > 1:249398‑M2/25‑150 (MQ=255) gtccaacaaaatgggtgcagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAAt < 2:250109‑M2/126‑1 (MQ=255) gtgcagtacaCCCGACAATAAAACTTGCCGGGGC‑TTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAATCGCTGGCAGCTTTaa > 2:555698‑M2/11‑150 (MQ=255) cagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAATCGCTGGCAGCTTTaaaa > 1:166203‑M2/8‑150 (MQ=255) cagtacaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAATCGCTGGCAGCTTTaaaa > 2:67783‑M2/8‑150 (MQ=255) acaCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAATCGCTGGCAGCTTTAAAAGcac > 2:301579‑M2/4‑150 (MQ=255) | ACACGCAGACGCAGAGTATCGTTAAGATGTCCATATTGTTGTTTTAGGCCCGCTAGTAATGCGCTACGGGTATTTAATATTGTTAAACCCTGATAATCGCTCCGGTTATTTCCGGGATAAATGTACTACCGCAGTTACTATCATAGCCCCGACAATAAAACTTGCCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAATCGCTGGCAGCTTTAAAAGCAC > REL606/3048342‑3048635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |