New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 590471 | NA (NA) | 21 (0.800) | 19/274 | NT | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
? | REL606 | 2655781 = | 0 (0.000) | coding (662/732 nt) | yfiH | hypothetical protein |
TCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGCCCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGTACTCGCTTTGGCGTCTGC > REL606/2655636‑2655920 | aactgaaggatgctgttacggaatatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTc < 1:624839‑M2/5‑1 (MQ=255) gaaggatgctgttacggaatatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacattttcaggg > 2:256687‑M2/142‑146 (MQ=255) gtataagagacagattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACaa < 1:527681‑M2/18‑1 (MQ=255) gttacggaatatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAAc > 2:68619‑M2/132‑150 (MQ=255) gttacggaatatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAAc < 2:172083‑M2/19‑1 (MQ=255) tacggaatatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACgg < 2:68867‑M2/21‑1 (MQ=255) atattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgccccgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCgccgcc > 1:372035‑M2/122‑150 (MQ=255) attgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTacaactgtctcttatac > 2:529201‑M2/120‑142 (MQ=255) ctacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctctatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGt > 1:451329‑M2/112‑150 (MQ=255) gcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACAcc > 2:669193‑M2/104‑150 (MQ=255) aagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACg < 2:671102‑M2/51‑1 (MQ=255) agaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGc < 1:401909‑M2/52‑1 (MQ=255) attaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGc < 2:433111‑M2/66‑1 (MQ=255) gtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACTCTGCCGGGCAAg > 1:362176‑M2/77‑150 (MQ=255) ctccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATa > 1:318311‑M2/71‑150 (MQ=255) attgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAatat < 2:292545‑M2/85‑1 (MQ=255) agacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTATc < 2:319213‑M2/101‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCTTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTATCAcc < 1:667224‑M2/104‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTATCAcc < 2:79755‑M2/104‑1 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTATCACCATGCtgaatgaa > 2:193983‑M2/35‑150 (MQ=255) gtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAg > 2:318539‑M2/33‑150 (MQ=255) caactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGTACTCGCt < 2:647324‑M2/129‑1 (MQ=255) ggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCAAGATACTTATCACCATGCTGAATGAAAGCTGTACTCGCTTTGGCGTctgc > 2:396811‑M2/11‑150 (MQ=255) | TCAATTATTCAAGGTTATTGACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGCCCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGTACTCGCTTTGGCGTCTGC > REL606/2655636‑2655920 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |