New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	2774966 =	NA (NA)	40 (1.500)	26/278	NT	NA	noncoding (912/1443 nt)	IS150	repeat region
	?	REL606	= 2775877	NA (NA)					noncoding (1/1443 nt)	IS150	repeat region

ATGTTCATCACTGGTCTTTCCGAAAGGCTGTAAGAAATAACTTCGTTGTTGAAGAGATCT‑ATTACTGGAGACAAAT‑ACAGCTTGCGCCCATTGACTGCAAATTCAGTAACATCGGTAACCCAC‑TTCTCGTTTGGCCGCGTAGCCTTGAAATCTCTTTGGAGAACATTAGGGGCGGTTTGCCCTACCTCTCCTCTGTAAGAGCGGTATCGCTTGACCTTAATCGCTGCTTTAAGTGAGAGGGTTCCCATCAGGCGCTGAACAGCTTTATGGTTAATCTGTTTC  >  REL606/2774819‑2775100                                                                                                                                                       |                                                                                                                                       attttaatcaCTGGTCTTTCCGAAATGCTGTAACAAATAACTTCGTTGTTGAAGAGATCT‑ATTACTGGCGACAAAT‑ACAGCTTGCGCCCATTGACTGCAAATTCAGTAACATCGGTAACCCAC‑TTCTCGTTTGGCCGCGTAGCCTTGaaa                                                                                                                                      <  1:661258/144‑1 (MQ=1) attttCATCACTGGTCTTTCCGAAAGGCTGTAAGAAATAACTTCGTTGTTGAAGAGATCT‑ATTACTGGAGACAAAT‑ACAGCTTGCGCCCATTGACTGCAAATTCAGTAACATCGGTAACCCAC‑TTCTCGTTTGGCCGCGTAGCCTTGaaa                                                                                                                                      <  1:486561/147‑1 (MQ=1) atcttCATCACTGGACTTTCCGGAAGGCTTGAAGAAATAAATTCGTTGTTGTAGAGATCT‑ATTACTGGAGAAAAAT‑ACAGCTTGCGCCCATTGACTTCAAATTCAGTAACATCGGGAACCCAC‑TTCACGTTTGGCCGCGTAGCCTTGaaa                                                                                                                                      <  1:322956/147‑1 (MQ=1)                                     aataccttgttgttTAAGAGAACTAATTACT‑GAGAAAAATAACACTTTGCCCCCATT‑ACCTCCAATTCCATAACAACCGTTACCCCCTTTCTGGTTTGGCCGCG‑AACCTTTAAAACTCCTTTGAGAACATTAGGGGCGGTTTGCCCTAcc                                                                                                  <  1:353380/142‑1 (MQ=0)                                                 taagagacagcT‑ATTACTGGAGACAAAT‑ACAGCTTGCGCCCATTGACTGCAAATTCAGTAACATCGGTAACCCAC‑TTCTCGTTTGGCCGCGTAGCCTTGAAATCTCTTTGGAGAACATTAGGGGCGGTTTGCCCTACCTCTCCTCTGTaa                                                                                      <  1:173897/140‑1 (MQ=0)                                                    aatagaTCT‑ATTACTGGAGACAAAT‑ACCGCTTGCGCCCATTGACTGCAAATTCAGTAACATCGGTAACCCAC‑TTCTCGTTTGGCCGCGTAGCCTTGAAATCTCTTTGGCGAACATTAGGGGCGGTTTGCCCTCCCTCTCCTCTGTAagag                                                                                   <  1:483820/147‑1 (MQ=0)                                                    aatagaTCT‑ATTACTGCAGACAAAT‑ACAGCTTTCGCCCATTTACTGCAAATTCAGTAACATCTGTAACCCAC‑TTCTCGTTTGGCCTCCTAGCCTTGAAATCTCTTTGGAGAACATTATGGGCGGTTTGCCCTACCTCTCCTCTGTAagag                                                                                   <  1:413119/147‑1 (MQ=1)                                                    aatagaTCT‑ATTACGGGAGACAAAT‑ACAGCTTGCTCCCATTGACTGCAAATTCAGTAACATCGGTAACCCAC‑TTCTCGTTTGGCCGCGTAGCCTTGAAATCTCTTTGGAGAACATTAGGGGCGGTTTGCCCTACCTCTCCTCTGTAagag                                                                                   <  1:610185/147‑1 (MQ=0)                                                         attt‑ATTACTGGAGACAAAT‑ACAGCTTTCGCCCATTGACTGCAAATTCTGTAACATCGGTAACCCAC‑TTCTCGTTTGGCCGCGTAGCCTTGAAATCTCTTTGGAGAACATTAGGGGCGGTTTGCCCTACCTCTGCTCTGTAAGAGCGGTa                                                                              >  1:507283/4‑150 (MQ=0)                                                                   tgaagaCAAAT‑ACTGCGTGCGCCCCTTGACTGCAAATTCAGTAACATCGGTACCCCAC‑TTCTCGTTTGGCCGTGTAGCCTTGAAATCTCTTTGGAGAACATTAGGGGCGGTTTGCCATACCTCTCCTCTGTAAGAGCGGTATCGCTTGAc                                                                     <  1:676068/147‑1 (MQ=1)                                                                    ggtgaCATAT‑ACAGCTTGCGCCCATTGACTGCAAATTCAGTAACATCTGTAACCCAC‑TTCTCGTTTGGCCGCGTAGCCTTGAAATCTCTTTGGAGAACATTAGGGGCGGTTTGCCCTACCTCTCCTCTGTAAGAGCGGTATCGCTTGAcc                                                                    <  1:8755/147‑1 (MQ=0)                                                                    ggggaCAACT‑ACAGCTTGCGCCCATTGACTGCAAATTCAGTAACATCGGTAACCCAC‑TTCTCGTTTGGCCGCGTAGCCTTGAAATCTCTTTGGAGAACATTAGGGGCGGTTTGCCCTAACTCTCCTCTGTAAGAGCGGTATCGCTTGAcc                                                                    <  1:257445/147‑1 (MQ=0)                                                                                            atggaatGCAAATTTAGTAACATCGGTAACCCAC‑TTCTCGTTTGGCCGCGTAGCCTTGAAATCTCTTTGGAGAACATTAGGGGCGGTTTGCCCTACCTCTCCTCTGTAAGAGCGGTATCGCTTGACCTTAATCGCTGCTTTAAGTGagag                                             <  1:187269/144‑1 (MQ=0)                                                                                                                                        ggactcgtcaccatGAAAGCTATTTTGTGAACATTCGGTGCGGTTTGCGTTACCTCTCCTCTGTAAGATGGGTATCTCTTTACCTTATTCGCTGCTTTAAGTGAGAGTGTTCCCATCAGGCGCTGAACAGCTTTATGGTTAATCTGTTTc  <  1:680593/137‑1 (MQ=1)                                                                                                                                                       |                                                                                                                                       ATGTTCATCACTGGTCTTTCCGAAAGGCTGTAAGAAATAACTTCGTTGTTGAAGAGATCT‑ATTACTGGAGACAAAT‑ACAGCTTGCGCCCATTGACTGCAAATTCAGTAACATCGGTAACCCAC‑TTCTCGTTTGGCCGCGTAGCCTTGAAATCTCTTTGGAGAACATTAGGGGCGGTTTGCCCTACCTCTCCTCTGTAAGAGCGGTATCGCTTGACCTTAATCGCTGCTTTAAGTGAGAGGGTTCCCATCAGGCGCTGAACAGCTTTATGGTTAATCTGTTTC  >  REL606/2774819‑2775100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.