New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	2774434 =	NA (NA)	22 (0.840) +TG	16/274	NT	NA	intergenic (+411/+27)	insL‑5/insK‑3	putative transposase insL for insertion sequence IS186/IS150 putative transposase
	?	REL606	= 2775877	NA (NA)					noncoding (1/1443 nt)	IS150	repeat region

ACGAGTCGCCTACCATCAGCGTGAATCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCTTCTGCTGTTGTAGTATTCAATATATTCCGTAACAGCATCCTTCAGTTC  >  REL606/2774287‑2774580                                                                                                                                                    |                                                                                                                                                   aCGAGTCGCCTACCATCAGCGTGAATCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTg                                                                                                                                                  <  1:146570/150‑1 (MQ=255)    aGTCGCCTACCATCAGCGTGAATCCCAGTACTGTTAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTAc                                                                                                                                               <  1:158296/150‑1 (MQ=255)    aGTCGCCTACCATCAGCGTGAATCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTAc                                                                                                                                               <  2:681878/150‑1 (MQ=255)    aGTCGCCTACCATCAGCGTGAATCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTAc                                                                                                                                               <  2:649707/150‑1 (MQ=255)    aGTCGCCTACCATCAGCGTGAATCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTAc                                                                                                                                               <  2:62442/150‑1 (MQ=255)    aGTCGCCTACCATCAGCGTGAATCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTAc                                                                                                                                               <  2:254949/150‑1 (MQ=255)         ccTACCATCAGCGTGAATCCCAGTCCTGTAATACACATCACTAAGATTGCCACAAGGGCATATTTTGTCATCATGCCTTCCCTCCCTGCATAGATGAAACTAACATTCGACTTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGAcc                                                                                                                                          >  1:56849/1‑150 (MQ=255)         ccTACCATCAGCGTGAATCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGAcc                                                                                                                                          >  2:424933/1‑150 (MQ=255)         ccTACCATCAGCGTGAATCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGAcc                                                                                                                                          >  2:214067/1‑150 (MQ=255)         ccTACCATAAGCGTGAATCCCAGTACTGTAAAACACAGCACTATGATTGCCAAAAGGGCATATTTTGTGAGCATGTCTTGCCTCCGTGCAATGAAGAGACTAACATTCGAATTGTTGGGGTTCGAACGTAAGCCTCAGGTTGTACTCAcc                                                                                                                                          >  1:168968/1‑150 (MQ=255)                   gCGTGAATCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGtt                                                                                                                                >  2:189921/1‑150 (MQ=255)                       agagacaggTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGAc                                                                                                                            <  1:197216/142‑1 (MQ=255)                          tCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGt                                                                                                                         >  2:264378/1‑150 (MQ=255)                          tCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGt                                                                                                                         >  1:365692/1‑150 (MQ=255)                          tCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGt                                                                                                                         >  1:455812/1‑150 (MQ=255)                          tCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGt                                                                                                                         >  1:101186/1‑150 (MQ=255)                          tCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGt                                                                                                                         >  2:39626/1‑150 (MQ=255)                               gTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGAcctgtctct                                                                                                                    >  2:197788/1‑142 (MQ=255)                                 aCTGTAAAACACAGCACTATGATTGCCACAAGGGTATATCTTTTCCGCATGTCTTGCCTCCCTGCATAGAAGAGACTAACATTCGAATTTTTCGGGTACGAACGTAAACCTCAGGTTGTACTGACCCCATAGAGTTGGACAGTTaactac                                                                                                                  >  1:523503/1‑146 (MQ=255)                                    gaaaaaCACAGCACTATGATTGCCACAATGTCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGCGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGat                                                                                                               >  1:289224/3‑149 (MQ=255)                                    gTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATATCTTGCCTCCCTGCAAAGAAGAGAATAACATTCGAATTGTGTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAg                                                                                                               >  1:212368/1‑150 (MQ=255)                                           acaGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGCGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAtata                                                                                                        <  1:423727/150‑1 (MQ=255)                                             agaaCTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAgg                                                                                                      <  1:213306/147‑1 (MQ=255)                                             aGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAgg                                                                                                      <  1:39505/150‑1 (MQ=255)                                             aGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAgg                                                                                                      <  1:272779/150‑1 (MQ=255)                                              gCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGTCATATAGGt                                                                                                     >  1:421702/1‑150 (MQ=255)                                              gCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGt                                                                                                     >  2:573391/1‑150 (MQ=255)                                              gCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGt                                                                                                     >  2:644025/1‑150 (MQ=255)                                               cACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTc                                                                                                    <  1:213454/150‑1 (MQ=255)                                               cACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTc                                                                                                    <  2:457107/150‑1 (MQ=255)                                               cACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTc                                                                                                    <  1:642139/150‑1 (MQ=255)                                                                            tCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGAcc                                                                       <  2:551989/150‑1 (MQ=255)                                                                                  tGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTaa                                                                 >  2:449311/1‑150 (MQ=255)                                                                                   gTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAAt                                                                >  2:432934/1‑150 (MQ=255)                                                                                    tCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACATTTTAAtt                                                               >  1:626239/1‑150 (MQ=255)                                                                                                gCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAAttc                                                   <  1:385926/150‑1 (MQ=255)                                                                                                gCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAAttc                                                   >  2:387052/1‑150 (MQ=255)                                                                                                      aagaGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGGCCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCTTctgc                                             <  2:212979/150‑1 (MQ=255)                                                                                                      aagaGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGATGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCTTctgc                                             <  2:433038/150‑1 (MQ=255)                                                                                                        gagaCTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCTATATTCAATTGGAGTCAGACCTCTTAATTTCAGGCTAATTCTTctgctg                                           >  1:448933/1‑150 (MQ=255)                                                                                                                cATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCTTCTGCTGTTgtagta                                   <  1:189379/150‑1 (MQ=255)                                                                                                                 aTTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCTTCTGCTGTTGTAGTAt                                  <  2:619463/150‑1 (MQ=255)                                                                                                                        ttGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACTGTTAAAGACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCTTCTGCTGTTGTAGTATTCAatat                           <  2:169448/150‑1 (MQ=255)                                                                                                                          gTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCTTCTGCTGTTGTAGTATTCAatatat                         >  1:310378/1‑150 (MQ=255)                                                                                                                            ttGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCTTCTGCTGTTGTAGTATTCAATATATTc                       <  2:366752/150‑1 (MQ=255)                                                                                                                                          gcagtacAGATTGAACTTACCCCAGAACGTTAGACAGTTAAAAATGAGGCATATAGGACTGATTCCGATACTCAACTGGAGTCAGACCTTATATTCTCAGGGTAATTCTTCTGCTGTTGTAGTATTTAATATATCCCAGAACATCATCCt         >  1:504026/7‑150 (MQ=2)                                                                                                                                            gCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCTTCTGCTGTTGTAGTATTCAATATATTCCGTAACAGCATCCTTc       >  1:547266/1‑150 (MQ=35)                                                                                                                                            gCCTCAGGTTGTACTGACCCCAAAAACTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCTTCTGCTGTTGTAGTATTCAATATATTCCGTAACAGCATCCTTc       <  1:448037/150‑1 (MQ=21)                                                                                                                                                cAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCTTCTGCTGTTGTAGTATTCAATATATTCCGTAACAGCATCCTTCAGtt   >  1:553839/1‑150 (MQ=32)                                                                                                                                                 aGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGGGTCAGACCTTTTAATTTCAGGCTAATTCTTCTGCTGTTGTAGTATTCAATATATTCCGTAACAGCATCCTTCAGTTc  >  1:103144/1‑150 (MQ=17)                                                                                                                                                    |                                                                                                                                                   ACGAGTCGCCTACCATCAGCGTGAATCCCAGTACTGTAAAACACAGCACTATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCTTCTGCTGTTGTAGTATTCAATATATTCCGTAACAGCATCCTTCAGTTC  >  REL606/2774287‑2774580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.