Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 4,462,655 | IS1 (+) +9 bp | 100% | intergenic (‑85/‑100) | yjgM ← / → yjgN | predicted acetyltransferase/conserved inner membrane protein |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 4462655 = | 0 (0.000) | 40 (1.500) | 20/278 | NT | 100% | intergenic (‑85/‑108) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
? | REL606 | 4521571 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
* | ? | REL606 | = 4462663 | 0 (0.000) | 40 (1.510) | 25/276 | NT | 100% | intergenic (‑93/‑100) | yjgM/yjgN | predicted acetyltransferase/conserved inner membrane protein |
? | REL606 | = 4506109 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region |
CCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4462519‑4462663 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTC < REL606/4506109‑4505962 CCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGA < 2:30506/150‑1 GCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCCCTTCTTACGTGCTCAAGCATCTTATAAAGCAATAACGTTTTAGGTGAAGCTGa > 1:522384/1‑149 CATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATT > 1:473790/1‑150 TTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA > 1:126245/1‑150 TTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA > 1:142644/1‑150 CAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTG < 2:347747/150‑1 CAGGTGATTGCGGCGCAATGGTATTCATAGTTTAACCCAATAAAAATAAACTAATTATACATTTGTTTAATAACACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTG < 2:434566/150‑1 GCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTT > 2:323874/1‑150 GTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGG < 2:669468/150‑1 GTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTG > 1:331458/1‑150 GTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTG > 2:110229/1‑150 GTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTG > 1:449762/1‑150 TTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG < 2:143052/150‑1 TTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG < 2:519087/150‑1 TTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG < 2:333731/150‑1 TAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT < 1:109907/150‑1 TAAAGTAATTTTTCATTTGTTTAATACCACTCTCCTCTTACGTGCGCACGCATCTTATAAAGCAATCAAGTATTTGGTGATGCTGCCAACTTTCTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCCCCAGTGGCTTCTGTTTCTAGCAG < 1:414722/150‑1 ATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC < 2:514474/150‑1 caTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC < 1:73420/148‑1 TTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC < 1:277760/150‑1 GTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCctg > 2:73636/1‑147 GTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGC > 2:254042/1‑150 GTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGC > 2:544360/1‑150 ATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGAAATAAAGTAATTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGGGTTTTTGAGGTGCGCCAGTGGCTTCTGTTTCTATCAGATGTCGCTCCTGTTCAGCTACTG > 1:140232/1‑150 agacagCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAC < 1:169541/144‑1 ACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAC < 2:126615/150‑1 CTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGG < 2:414885/150‑1 TCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGT < 2:94653/150‑1 CTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACctgtct > 2:170022/1‑144 CTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTG > 2:550440/1‑150 CTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTG > 2:589022/1‑150 CTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGT > 1:266814/1‑150 CTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGT > 2:421894/1‑150 CTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGT > 2:105418/1‑150 TCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGC > 1:336284/1‑150 TTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGT < 2:332398/150‑1 CGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAAC < 2:304907/150‑1 TCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACC > 2:126869/1‑150 TATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCC > 1:141052/1‑150 gttcaTGGTGATTCTCCCCACTTCCTGATTTAGTGTGTATGATGGTCTTTTTTAGGTGCTCCAGTGGCTTCTGTTTCTATCATCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCTTAACGGCAAAAGCACCGCCGGACATCAGCGC < 1:388825/145‑1 GTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTA > 2:593477/1‑150 GTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTA > 2:173069/1‑150 TTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATGAGCGCTATCT < 2:469363/150‑1 TTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTC < 1:105113/150‑1 CCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4462519‑4462663 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTC < REL606/4506109‑4505962 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |