Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 4,462,655 IS1 (+) +9 bp 100% intergenic (‑85/‑100) yjgM ← / → yjgN predicted acetyltransferase/conserved inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 4462655 =0 (0.000)40 (1.500) 20/278 NT 100% intergenic (‑85/‑108) yjgM/yjgN predicted acetyltransferase/conserved inner membrane protein
?REL606 4521571 = NA (NA)noncoding (768/768 nt) IS1 repeat region
* ? REL606 = 44626630 (0.000)40 (1.510) 25/276 NT 100% intergenic (‑93/‑100) yjgM/yjgN predicted acetyltransferase/conserved inner membrane protein
?REL606 = 4506109 NA (NA)noncoding (1/768 nt) IS1 repeat region

CCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/4462519‑4462663
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTC  <  REL606/4506109‑4505962
                                                                                                                                                                                                                                                                                                       
CCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGA                                                                                                                                                   <  2:30506/150‑1
      GCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCCCTTCTTACGTGCTCAAGCATCTTATAAAGCAATAACGTTTTAGGTGAAGCTGa                                                                                                                                             >  1:522384/1‑149
                   CATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATT                                                                                                                                >  1:473790/1‑150
                     TTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA                                                                                                                              >  1:126245/1‑150
                     TTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA                                                                                                                              >  1:142644/1‑150
                        CAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTG                                                                                                                         <  2:347747/150‑1
                        CAGGTGATTGCGGCGCAATGGTATTCATAGTTTAACCCAATAAAAATAAACTAATTATACATTTGTTTAATAACACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTG                                                                                                                         <  2:434566/150‑1
                                      GCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTT                                                                                                           >  2:323874/1‑150
                                           GTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGG                                                                                                      <  2:669468/150‑1
                                                     GTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTG                                                                                            >  1:331458/1‑150
                                                     GTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTG                                                                                            >  2:110229/1‑150
                                                     GTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTG                                                                                            >  1:449762/1‑150
                                                      TTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG                                                                                           <  2:143052/150‑1
                                                      TTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG                                                                                           <  2:519087/150‑1
                                                      TTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG                                                                                           <  2:333731/150‑1
                                                        TAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT                                                                                         <  1:109907/150‑1
                                                                      TAAAGTAATTTTTCATTTGTTTAATACCACTCTCCTCTTACGTGCGCACGCATCTTATAAAGCAATCAAGTATTTGGTGATGCTGCCAACTTTCTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCCCCAGTGGCTTCTGTTTCTAGCAG                                                                           <  1:414722/150‑1
                                                                                ATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC                                                                 <  2:514474/150‑1
                                                                                     caTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC                                                            <  1:73420/148‑1
                                                                                     TTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC                                                            <  1:277760/150‑1
                                                                                        GTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCctg                                                         >  2:73636/1‑147
                                                                                        GTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGC                                                         >  2:254042/1‑150
                                                                                        GTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGC                                                         >  2:544360/1‑150
                                                                                             ATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGAAATAAAGTAATTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGGGTTTTTGAGGTGCGCCAGTGGCTTCTGTTTCTATCAGATGTCGCTCCTGTTCAGCTACTG                                                    >  1:140232/1‑150
                                                                                               agacagCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAC                                                  <  1:169541/144‑1
                                                                                               ACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAC                                                  <  2:126615/150‑1
                                                                                                   CTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGG                                              <  2:414885/150‑1
                                                                                                    TCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGT                                             <  2:94653/150‑1
                                                                                                     CTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACctgtct                                            >  2:170022/1‑144
                                                                                                     CTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTG                                            >  2:550440/1‑150
                                                                                                     CTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTG                                            >  2:589022/1‑150
                                                                                                       CTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGT                                          >  1:266814/1‑150
                                                                                                       CTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGT                                          >  2:421894/1‑150
                                                                                                       CTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGT                                          >  2:105418/1‑150
                                                                                                         TCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGC                                        >  1:336284/1‑150
                                                                                                           TTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGT                                      <  2:332398/150‑1
                                                                                                              CGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAAC                                   <  2:304907/150‑1
                                                                                                                          TCTTATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACC                       >  2:126869/1‑150
                                                                                                                             TATAAAGCAATAAAGTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCC                    >  1:141052/1‑150
                                                                                                                                           gttcaTGGTGATTCTCCCCACTTCCTGATTTAGTGTGTATGATGGTCTTTTTTAGGTGCTCCAGTGGCTTCTGTTTCTATCATCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCTTAACGGCAAAAGCACCGCCGGACATCAGCGC        <  1:388825/145‑1
                                                                                                                                           GTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTA      >  2:593477/1‑150
                                                                                                                                           GTTTTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTA      >  2:173069/1‑150
                                                                                                                                              TTTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATGAGCGCTATCT   <  2:469363/150‑1
                                                                                                                                               TTGGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTC  <  1:105113/150‑1
                                                                                                                                                                                                                                                                                                       
CCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTGCGCAAGCATCTTATAAAGCAATAAAGTTTTTg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/4462519‑4462663
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTA‑‑GTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTC  <  REL606/4506109‑4505962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.