| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 3,841,192 | IS150 (+) +3 bp | 100% | coding (389‑391/1074 nt) | recF ← | recombination protein F |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590471 | NA (NA) | 41 (1.540) | 29/278 | NT | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
| ? | REL606 | 3841192 = | 0 (0.000) | coding (391/1074 nt) | recF | recombination protein F | |||||
| * | ? | REL606 | = 3841194 | 0 (0.000) | 31 (1.180) | 25/274 | NT | 100% | coding (389/1074 nt) | recF | recombination protein F |
| ? | REL606 | 3893554 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
TCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3841050‑3841194‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGGT > REL606/3893554‑3893699 TCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTAC < 1:550927/150‑1TCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCACATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTAC < 2:221549/150‑1 gGGGCGTGGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTGGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCAC < 1:454141/149‑1 ctGGCGTAGCTGTTCGTAACGTGTCACCTTGCGCAGCGCCGCATTGCGCTGCTCTAGCAATCGGTTGAGATTGCTCCAGGCGGTGCAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCAC < 1:276536/148‑1 GGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCC < 1:421433/150‑1 GGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCC > 1:112702/1‑150 GCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCA > 2:97516/1‑150 GCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTG < 1:196955/150‑1 CTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTCAGCAATCGCATGAGATTGCTCCAGGCGGTGAAAAAGCCGGGTTCGTTGTCAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGT < 1:111584/150‑1 GTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTG > 2:101987/1‑150 ACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATG > 2:618494/1‑150 CCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGGGATTGCTCCAGGCGGTGAAAAGTCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCGGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA < 1:530639/150‑1 CTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 1:616686/150‑1 GCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT < 2:436276/150‑1 GCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT < 2:532548/150‑1 CCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGCTGAAATGGAATAGCCCCTAATA < 2:430692/150‑1 CCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < 2:438866/150‑1 CCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < 2:386920/150‑1 AATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCT < 2:404035/150‑1 TGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAA < 1:391369/150‑1 GAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCAATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGCAAA > 1:196832/1‑150 AGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG < 2:113036/150‑1 AAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAAT < 1:95480/150‑1 AAAATCCGGGTTCGGTGTGAATGCATCCCCATTCCAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGAGGATGAAATGGAATAGCCACTAATATGTCAAAGACAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATC < 1:122722/150‑1 AAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA < 2:323301/150‑1 AAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA > 2:524852/1‑150 CCGGGTGCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTAC < 1:489210/150‑1 GTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATATCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAAC < 2:393080/150‑1 CCAGTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAG < 1:101689/150‑1 GTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGAT > 2:172876/1‑150 GTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGAT > 2:267464/1‑150 GTCGAGGAATGCTCTTCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGAT > 2:294654/1‑150 TCTGTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTCCACAACTGATGATGGTTCCCGGATCTGCTCGTAACGTTT > 1:284028/1‑150 GTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGG > 2:361824/1‑150 GTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGG > 1:143721/1‑150 GTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGG > 2:190173/1‑150 GTATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGG > 2:64424/1‑150 TATTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTGGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGGT < 1:523348/150‑1 TCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3841050‑3841194‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGGT > REL606/3893554‑3893699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |