| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2100285 = | 30 (1.120) | 11 (0.490) | 8/232 | NT | 22.4% | intergenic (+149/+124) | yegQ/ogrK | predicted peptidase/phage DNA‑binding transcriptional regulator |
| ? | REL606 | = 2122430 | 51 (2.290) | coding (196/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein | |||||
AGACCGCACCCGTTGCCGTCAGGGCAGCAAATTATGTGGATGTAATTACAAACAGGAAGCCCCTCAGTCGAGGGGCTTTTTTGTCGATGTGGTCAATGTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2100453‑2100285‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaataagcccgtgtaagggaTATTTAGGGTGTCACCAGTAGGGGCTTTCAACGGTACAATGCGGGTTTGAGCGGCATAAATTACCACTGAAAGCCCTTAAACGTTACTCTACTGTGGACACTGTGTGGACACTCTCGGCCTCAGTACCACCTCTTAGCGGATTA < REL606/2122430‑2122287 AGACCGCACCCGTTGCCGTCAGGGCAGCAAATTATGTGGATGTAATTACAAACAGGAAGCCCCTCAGTCGAGGGGCTTTTTTGTCGATGTGGTCAATGTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAA > 1:498340/1‑150 CCCGTTGCCGTCAGGGCAGCAAATTATGTGGATGTAATTACAAACAGGAAGCCCCTCAGTCGAGGGGCTTTTTTGTCGATGTGGTCAATGTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCC < 1:210979/150‑1 CCCGTTGCCGTAAGAGGAGCAAATTATGTGGATGTAATTACAAACAGGAAGGCCCTCAGTCGAGGGGCTTTTTTGTCGATGTGGTCAATGTGTGGACGTGACCAGAAATAAATCCGTTTATTTCATTGTATTACGCGTAAAAAAGAAGCC < 1:161008/150‑1 CCCGTGGCCGTAAGGGCAGCAAATTATGTGGATGTAATTACAAACAGGAAGCCCCTCAGTCGAGGGGCTTTCTTGTCGATGTGGTCAATGTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCC < 1:652880/150‑1 TCAGGGCAGCAAATTATGTGGATGTAATTACAAACAGGAAGCCCCTCAGTCGAGGGGCTTTTTTGTCGATGTGGTCAATGTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGG < 2:75177/150‑1 TCAGGGCAGCAAATTATGTGGATGTAATTACAAACAGGAAGCCCCTCAGTCGAGGGGCTTTTTTGTCGATGTGGTCAATGTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGG < 2:119625/150‑1 TCAGGGCAGCAAATTATGTGGATGTAATTACAAACAGGAAGCCCCTCAGTCGAGGGGCTTTTTTGTCGATGTGGTCAATGTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGG < 2:600182/150‑1 AAATTATGTGGATGTAATTACAAACAGGAAGCCCCTCAGTCGAGGGGCTTTTTTGTCGATGTGGTCAATGTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGGATATTTAGGG < 2:139543/150‑1 GATGTAATTACAAACAGGAAGCCCCTCAGTCGAGGGGCTTTTTTGTCGATGTGGTCAATGTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGGATATTTAGGGTGTCACCAGT < 2:146816/150‑1 CCTCAGTCGAGGGGCTTTTTTGTCGATGTGGTCAATGTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGGATATTTAGGGTGTCACCAGTAGGGGCTTTCAACGGTACAATGC > 1:102583/1‑150 GTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGGATATTTAGGGTGTCACCAGTAGGGGCTTTCAAGGGTACAATGCGGGTTTGAGCGGCATAAATTACCACTGAAAGCCATT > 1:168528/1‑150 GTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGGATATTTAGGGTGTCACCAGTAGGGGCTTTCAACGGTACAATGCGGGTTTGAGCGGCATAAATTACCACTGAAAGCCCTT > 1:10056/1‑150 GTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGGATATTTAGGGTGTCACCAGTAGGGGCTTTCAACGGTACAATGCGGGTTTGAGCGGCATAAATTACCACTGAAAGCCCTT > 2:46986/1‑150 GTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGGATATTTAGGGTGTCACCAGTAGGGGCTTTCAACGGTACAATGCGGGTTTGAGCGGCATAAATTACCACTGAAAGCCCTT > 2:358007/1‑150 ACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGGATATTTAGGGTGTCACCAGTAGGGGCTTTCAACGGTACAATGCGGGTTTGAGCGGCATAAATTACCACTGAAAGCCCTTAAACGT < 2:499756/150‑1 AATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGGATATTTAGGGTGTCACCAGTAGGGGCTTTCAACGGTACAATGCGGGTTTGAGCGGCATAAATTACCACTGAAAGCCCTTAAACGTTACTCTACTGTGGAC < 2:102884/150‑1 TTCAATGTATTACGCGTATAAAATAAGCCAGTTTAAGGGATATTTAGGGTGTGACCAGTAGGGGCTTTCAACGGTACAATGCGGGTTTGAGCGGCATAAATTACCACGGAAAGCACTTAAACGTTACTCTACTGTGGACACTGTGTGGAC < 1:356979/150‑1 TTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGGATATTTAGGGTGTCACCAGTAGGGGCTTTCAACGGTACAATGCGGGTTTGAGCGGCATAAATTACCACTGAAAGCCCTTAAACGTTACTCTACTGTGGACACTGTGTGGACACTC < 2:288534/150‑1 AAAAAATAAGCCCGTGTAAGGGATATTTAGGGTGTCACCAGTAGGGGCTTTCAACGGTACAATGCGGGTTTGAGCGGCATAAATTACCACTGAAAGCCCTTAAACGTTACTCTACTGTGGACACTGTGTGGACACTCTCGGCCTCAGTAC < 2:10089/150‑1 AAGGGATATTTAGGGTGTCACCAGTAGGGGCTTTCAACGGTACAATGCGGGTTTGAGCGGCATAAATTACCACTGAAAGCCCTTAAACGTTACTCTACTGTGGACACTGTGTGGACACTCTCGGCCTCAGTACCACCTCTTAGCGGATTA > 2:244594/1‑150 AGACCGCACCCGTTGCCGTCAGGGCAGCAAATTATGTGGATGTAATTACAAACAGGAAGCCCCTCAGTCGAGGGGCTTTTTTGTCGATGTGGTCAATGTGTGGACGTGACCAGAAATAAATCCTTTTATTTCATTGTATTACGCGTAAAAAATAAGCCCGTGTAAGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2100453‑2100285‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaataagcccgtgtaagggaTATTTAGGGTGTCACCAGTAGGGGCTTTCAACGGTACAATGCGGGTTTGAGCGGCATAAATTACCACTGAAAGCCCTTAAACGTTACTCTACTGTGGACACTGTGTGGACACTCTCGGCCTCAGTACCACCTCTTAGCGGATTA < REL606/2122430‑2122287 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |