Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 1,270,660 | IS150 (–) +4 bp | 100% | intergenic (‑167/+235) | ldrC ← / ← chaA | toxic polypeptide, small/calcium/sodium:proton antiporter |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 664688 = | NA (NA) | 33 (1.250) | 24/274 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 1270660 = | 0 (0.000) | intergenic (‑167/+238) | ldrC/chaA | toxic polypeptide, small/calcium/sodium:proton antiporter | |||||
* | ? | REL606 | = 666130 | NA (NA) | 29 (1.090) | 21/278 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 1270663 | 0 (0.000) | intergenic (‑170/+235) | ldrC/chaA | toxic polypeptide, small/calcium/sodium:proton antiporter |
CACCAAAACGTGCCGAGATGATCCTGTAACCATCATCAGTTGTGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/664834‑664688 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGTACAGGCTCGCAATTCT > REL606/1270660‑1270804 CACCAAAACGTGCCGAGATGATCCTGTAACCCTCATCAGTTGTGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGGATTTTGGCTATGACATATTAGGGGCTATTCAATTTCATCGTCCAACAAAATGGGTGCAGTACACCG > 1:451404/1‑150 CCAAAACGTGCCTAGATGATCCTGTAACCATCATCAGTTGGGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGg < 1:636121/150‑2 CGTGCCTAGAGGATCCTGTAACCATCATCAGTTGTGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGTGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTC < 1:93219/150‑1 CGTGCCGAGATGATCCTGTAACCATCATCAGTTGTGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTC < 2:657103/150‑1 TCCTGTAACCATCATCAGTTGTGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCCACAACATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGG > 1:241213/1‑150 gccttctTCAGTTGTGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAATAGGTTATTTTGGCTTTGACATTTTAGGGGCTATTCCATTTCATCGTCCAACTCGATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGAGACTAC < 1:250434/143‑1 ACCATCATCAGTTGTGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTAC < 2:90823/150‑1 ACCATCATCAGTTGTGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTAC > 2:387284/1‑150 ACCATCATCAGTTGTGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTAC < 2:378808/150‑1 CATCAGTTGTGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTC < 2:134046/150‑1 GTTGTGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTC > 2:164763/1‑150 ACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAA > 1:513574/1‑150 CTTCAAGGCTCTTTTCAAGAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACGACTTCTCAATTCATCTTCACTGCATCCCTGAAAT > 1:361510/1‑150 CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATA > 2:234952/1‑150 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGTTGCAGTACGCCGTATAATTCGGGCTTGGTGAGGTTTCTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGCTTGCAATAAg > 1:257936/1‑149 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAG < 2:362553/150‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTG > 2:366599/1‑150 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATATTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTG > 1:633226/1‑150 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACCTTCCGTCTTTTCAACAGCTGTTGCAG > 1:549005/1‑150 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAG > 2:179837/1‑150 CCATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCG > 1:367388/1‑150 CCATTTCATCGTCCAACAAAATGGGTGAAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAACTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCG > 2:409596/1‑150 ATTTCATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTG < 2:368451/150‑1 ATCGTCCAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGT < 2:241893/150‑1 CAACAAAATGTGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGGTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGT < 1:569554/150‑1 CAACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGT < 2:203313/150‑1 ACAACATGGGTGCAGTACACCGGATAAGTCCGGCTTGGTGTGGATAATACTTCTCAATTCACCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGTAC < 1:532794/150‑1 ACAAAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGTAC < 1:365541/150‑1 aagagacagGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGTACAG < 1:610104/141‑1 AAATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGTACAGG < 2:515047/150‑1 AATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGTACAGGC > 2:11525/1‑150 ATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGTACAGGCT < 2:539393/150‑1 GTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTAGTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCACGTTGCGGTACAGGTTCGCA > 1:431865/1‑150 GTGCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGTACAGGCTCGCA > 2:447251/1‑150 GCAGTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGTACAGctgtctctt > 2:611894/1‑141 GTACACCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGTACAGGCTCGCAATTCT > 2:48910/1‑150 CACCAAAACGTGCCGAGATGATCCTGTAACCATCATCAGTTGTGAAGTAGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/664834‑664688 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCCGGATAATTCCGGCTTGGTGTGGATACTACTTCTCAATTCATCTTCACTTCATCCCTGAAATGTTTGCAATAAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGTTGTGGTACAGGCTCGCAATTCT > REL606/1270660‑1270804 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |