Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_007779 1,105,622 Δ1,336 bp insDinsC insD, insC

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_007779 1105622–1106953 1106957 5–1336 23 [0] [0] 26 insD–insC insD,insC

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 11056210 (0.000)21 (0.480) 17/188 1.3 100% intergenic (+87/+12) csgC/insD curli production protein/IS2 element protein
?NC_007779 1106958 = 0 (0.000)intergenic (‑97/‑33) insC/ymdA IS2 element protein/hypothetical protein

CTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCA  >  NC_007779/1105530‑1105717
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cTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTcaaggatga                                                                                         <  3:514275‑M1/101‑10 (MQ=255)
          tgcaatatCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGAATGGATAACACAACCCTcaaggatgactaatcattg                                                                               >  1:1537997‑M1/4‑82 (MQ=255)
                      cATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaat                                                                   >  1:274132‑M1/1‑70 (MQ=255)
                         aaGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaa                                                                <  3:318473‑M1/101‑35 (MQ=255)
                               aaTCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttca                                                          <  3:324380‑M1/101‑41 (MQ=255)
                                aTCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttcag                                                         >  3:767117‑M1/1‑60 (MQ=255)
                                         gaATGGTCTGCTGCGAATCAGCCATCCTGAAAGTATGGATAACACACCCCTcaaggatgactaatcattgaggaaatagaataaatgttcagacctttttt                                                <  1:817342‑M1/101‑51 (MQ=255)
                                          aaTGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttcagacctttttta                                               >  1:819193‑M1/1‑50 (MQ=255)
                                            tGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaa                                             <  1:1140947‑M1/101‑54 (MQ=255)
                                                         aTCAGCCAACCTGAAAGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctc                                >  3:492922‑M1/1‑35 (MQ=255)
                                                              ccAACCTGAAAGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctcggcag                           <  1:32729‑M1/101‑72 (MQ=255)
                                                               cAACCTGAAAGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctcggcagt                          >  1:495890‑M1/1‑29 (MQ=255)
                                                                aaCCTGAAAGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctcggcagtt                         <  4:89961‑M1/101‑74 (MQ=255)
                                                                aaCCTGAAAGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctcggcagtt                         <  4:7231‑M1/101‑74 (MQ=255)
                                                                 aCCTGAAAGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctcggcagttt                        >  1:1413017‑M1/1‑27 (MQ=255)
                                                                       aaGTATGGATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctcggcagtttgttttt                  <  1:498537‑M1/101‑81 (MQ=255)
                                                                        tccgatcttaacacaacCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttattctcggcagtttgtttttt                 <  4:105223‑M1/93‑82 (MQ=255)
                                                                         gTATGGATCACCCCACCCTcccggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctcggcagtttgttttttc                >  4:20583‑M1/1‑19 (MQ=255)
                                                                             ggATAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctcggcagtttgttttttccttt            <  1:135177‑M1/101‑87 (MQ=255)
                                                                                tAACACAACCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctcggcagtttgttttttagatcgga         >  2:105331‑M1/1‑12 (MQ=255)
                                                                                     caACCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctcggcagtttgttttttccttttattgcca    >  1:52350‑M1/1‑7 (MQ=255)
                                                                                      aaCCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctcggcagtttgttttttccttttattgccat   <  1:262994‑M1/101‑96 (MQ=255)
                                                                                       aCCCTcaaggatgactaatcattgaggaaatagaataaatgttcagaccttttttaaactctcttatgctcggcagtttgttttttccttttattgccatt  <  1:150235‑M1/101‑97 (MQ=255)
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CTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCA  >  NC_007779/1105530‑1105717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: