Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_007779 1,301,041 Δ1,336 bp insCinsD insC, insD

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_007779 1301041–1302370 1302376 7–1336 24 [0] [0] 24 insC–insD insC,insD

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 13010400 (0.000)21 (0.490) 19/186 1.1 100% intergenic (+218/‑90) ychE/insC inner membrane protein/IS2 element protein
?NC_007779 1302377 = 0 (0.000)intergenic (+19/‑519) insD/oppA IS2 element protein/oligopeptide transporter subunit

TGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACA  >  NC_007779/1302279‑1302476
                                                                                                  |                                                                                                   
tagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattatta                                                                                                   <  3:152009‑M2/3‑1 (MQ=255)
  gttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAAt                                                                                                 >  3:560434‑M2/97‑101 (MQ=255)
      taaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCa                                                                                             >  3:1172001‑M2/93‑101 (MQ=255)
             ttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCtt                                                                                      >  1:384393‑M2/86‑101 (MQ=255)
                       gcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGa                                                                            <  3:1537690‑M2/26‑1 (MQ=255)
                           ctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGt                                                                        >  1:445652‑M2/72‑101 (MQ=255)
                                 accatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTaaa                                                                  >  3:329671‑M2/66‑101 (MQ=255)
                                      catgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAaataata                                                             >  1:777627‑M2/61‑101 (MQ=255)
                                          ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCa                                                         >  1:1026354‑M2/57‑101 (MQ=255)
                                              tttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTg                                                     <  3:352048‑M2/49‑1 (MQ=255)
                                                         cataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATtg                                          >  3:376769‑M2/42‑101 (MQ=255)
                                                            aatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAGAGTGCTAAATAATAATCAATTGTTAAATTATTGTGc                                       >  1:1583841‑M2/39‑101 (MQ=255)
                                                            aatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGc                                       >  1:621184‑M2/39‑101 (MQ=255)
                                                              tcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCAt                                     >  1:1237620‑M2/37‑101 (MQ=255)
                                                                     cttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCacta                              <  3:387361‑M2/72‑1 (MQ=255)
                                                                      ttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCactac                             <  1:193012‑M2/73‑1 (MQ=255)
                                                                       tgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCactact                            <  3:627191‑M2/74‑1 (MQ=255)
                                                                       tgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCactact                            <  3:1600309‑M2/74‑1 (MQ=255)
                                                                       tgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCactact                            >  1:1076227‑M2/28‑101 (MQ=255)
                                                                             agaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                      <  3:148183‑M2/80‑1 (MQ=255)
                                                                                        aatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaa           >  1:951458‑M2/11‑101 (MQ=255)
                                                                                               ttaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa    <  3:1388159‑M2/98‑1 (MQ=255)
                                                                                                 aTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACa  >  1:1131305‑M2/2‑101 (MQ=255)
                                                                                                 aTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACa  >  1:122265‑M2/2‑101 (MQ=255)
                                                                                                  |                                                                                                   
TGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACA  >  NC_007779/1302279‑1302476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.