| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 363579 | 0 (0.000) | 14 (0.510) +CGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATT |
12/118 | 1.0 | 100% | coding (1951/3075 nt) | lacZ | beta‑D‑galactosidase |
| ? | NC_007779 | 3464760 = | NA (NA) | intergenic (‑136/+165) | murB/rrfB | UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding/5S ribosomal RNA | |||||
GGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCGTTATCGCTATGACGGAACAGGTATTCGCTGGTCACTTCGATGGTTTGCCCGGATAAACGGAACTGGAAAAACTGCTGCTGGTGTTTTGCTTCCGTCAG > NC_007779/363479‑363678 | ggCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTc < 1:463253/101‑1 (MQ=255) gCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCc < 3:247232‑M1/101‑2 (MQ=255) aGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcga > 3:282848‑M1/1‑98 (MQ=255) atcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataa < 3:85263‑M1/101‑10 (MQ=255) tcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataag < 3:1070229‑M1/101‑11 (MQ=255) tcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataag < 3:1224312‑M1/101‑11 (MQ=255) tcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataag < 3:1059085‑M1/101‑11 (MQ=255) ttACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaa < 1:1481204‑M1/101‑19 (MQ=255) tgGAGCGACATCCAGAGGCACTTCACCGCTTGCAAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaa < 3:523696‑M1/101‑27 (MQ=255) gAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaatt < 3:555979‑M1/101‑29 (MQ=255) aTCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatcc < 1:1512806‑M1/101‑36 (MQ=255) ccAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatcccc > 3:527033‑M1/1‑64 (MQ=255) ggCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattc < 3:1366522‑M1/101‑43 (MQ=255) aCTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctg < 3:693005‑M1/101‑46 (MQ=255) tCACCGCTTGCCAGGTGCTTACCATCCAGCGCCGCCATCCAGTGCGGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggca < 1:238052‑M1/101‑49 (MQ=255) tCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggca < 1:511834‑M1/101‑49 (MQ=255) tCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggca < 1:788679‑M1/101‑49 (MQ=255) cTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaagtcctggcagtgtat < 4:141821‑M1/101‑55 (MQ=255) ttGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatg < 1:237090‑M1/101‑56 (MQ=255) tGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatgg < 3:1376294‑M1/101‑57 (MQ=255) aCCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgggcgtcctgc < 3:627390‑M1/101‑69 (MQ=255) ccATCCAGCGCGTCCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgggcgtcctgcc < 3:226074‑M1/101‑70 (MQ=255) aTCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgggcggcccgcccccccccccccccgc > 3:837533‑M1/1‑17 (MQ=255) cTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaac < 1:571240‑M1/101‑99 (MQ=255) cTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgggcgtcccgccccccccccccccggccgctgcttcgccac > 3:1016346‑M1/1‑3 (MQ=255) tCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacg < 1:1337970‑M1/101‑100 (MQ=255) | GGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCGTTATCGCTATGACGGAACAGGTATTCGCTGGTCACTTCGATGGTTTGCCCGGATAAACGGAACTGGAAAAACTGCTGCTGGTGTTTTGCTTCCGTCAG > NC_007779/363479‑363678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |