Predicted mutation
evidence seq id position mutation annotation gene description
MC JC ADP1‑WT 2,726,455 Δ1,268 bp ACIAD2779ACIAD2782 ACIAD2779, ACIAD2780, ACIAD2781, ACIAD2782

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ ADP1‑WT 2726455 2727722 1268 30 [0] [0] 30 ACIAD2779–ACIAD2782 ACIAD2779,ACIAD2780,ACIAD2781,ACIAD2782

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? ADP1‑WT = 27264540 (0.000)30 (0.860) 28/250 0.3 100% intergenic (‑741/+6) ACIAD2778/ACIAD2779 AraC family transcriptional regulator/hypothetical protein
?ADP1‑WT 2727723 = 0 (0.000)intergenic (‑186/+93) ACIAD2782/ACIAD2783 hypothetical protein/hypothetical protein

TGCTATTTAAATTCTGGACTTGAGCAGCACTGCTGCGCAAGATAGCCTTTCCCTACATCTCCAAAGTTAACGTTACGTTATCTTTAGAGGGACCATGTGTCCATTATTTTGTCTAGGACCAGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCTTATTTATCACTTAATGATTAAACTATTTAGCAGTTAAAGATAAAAAAATTG  >  ADP1‑WT/2727602‑2727844
                                                                                                                         |                                                                                                                         
tttgatgcgctacattaaaatcatcatcgatcattttactgtcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCa                                                                                                                       >  1:140128‑M2/122‑126 (MQ=255)
  tgatgcgctacattaaaatcatcatcgatcattttactgtcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAg                                                                                                                     <  2:353368‑M2/7‑1 (MQ=255)
    atgcgctacattaaaatcatcatcgatcattttactgtcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTg                                                                                                                   <  2:208873‑M2/9‑1 (MQ=255)
    atgcgctacattaaaatcatcatcgatcattttactgtcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTg                                                                                                                   >  1:72176‑M2/118‑126 (MQ=255)
         ctacattaaaatcatcatcgatcattttactgtcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGtt                                                                                                              >  2:480623‑M2/113‑126 (MQ=255)
            cattaaaatcatcatcgatcattttactgtcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTAc                                                                                                           <  1:355820‑M2/17‑1 (MQ=255)
             attaaaatcatcatcgatcattttactgtcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACt                                                                                                          <  1:192772‑M2/18‑1 (MQ=255)
             attaaaatcatcatcgatcattttactgtcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACt                                                                                                          >  1:322528‑M2/109‑126 (MQ=255)
                aaaatcatcatcgatcattttactgtcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGa                                                                                                       <  1:400353‑M2/21‑1 (MQ=255)
                        catcgatcattttactgtcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACa                                                                                               >  2:495117‑M2/98‑126 (MQ=255)
                               cattttactgtcatagttatcgcactattttatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATg                                                                                        >  1:48202‑M2/91‑126 (MQ=255)
                               cattttactgtcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATg                                                                                        >  1:425396‑M2/91‑126 (MQ=255)
                                 ttttactgtcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAg                                                                                      >  2:19771‑M2/89‑126 (MQ=255)
                                         tcatagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTc                                                                              <  2:142207‑M2/46‑1 (MQ=255)
                                            tagttatcgcactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCaat                                                                           <  1:481312‑M2/49‑1 (MQ=255)
                                                     cactatttgatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTaaa                                                                  <  2:322080‑M2/58‑1 (MQ=255)
                                                             gatcagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATAttagtt                                                          >  2:281448‑M2/61‑126 (MQ=255)
                                                             gataagattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATAttagtt                                                          <  1:292675‑M2/66‑1 (MQ=255)
                                                                  gattacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCt                                                     <  1:231117‑M2/71‑1 (MQ=255)
                                                                   attacctcaccatttaatatctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCtt                                                    >  1:457658‑M2/55‑126 (MQ=255)
                                                                                       ctgttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCTTATTTATCACTTAATGATTaa                                >  1:43040‑M2/35‑126 (MQ=255)
                                                                                         gttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCTTATTTATCACTTAATGATTAAAc                              <  1:436686‑M2/94‑1 (MQ=255)
                                                                                          ttgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCTTATTTATCACTTAATGATTAAACt                             <  2:238129‑M2/95‑1 (MQ=255)
                                                                                          tctaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCTTATTTATCACTTAATGATTAAACt                             <  2:45518‑M2/95‑1 (MQ=255)
                                                                                           tgaggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCTTATTTATCACTTAATGATTAAACTa                            <  2:72094‑M2/96‑1 (MQ=255)
                                                                                             aggatgatactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCTTATTTATCACTTAATGATTAAActaga                          >  1:45574‑M2/29‑124 (MQ=255)
                                                                                                    tactttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCTTATTTATCACTTAATGATTAAACTATTTAGCAGt                   <  1:281872‑M2/105‑1 (MQ=255)
                                                                                                       tttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCTTATTTATCACTTAATGATTAAACTATTTAGCAGTTaa                <  2:457001‑M2/108‑1 (MQ=255)
                                                                                                       tttcgactaactgagtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCTTATTTATCACTTAATGATTAAACTATTTAGCAGTTaa                >  1:224286‑M2/19‑126 (MQ=255)
                                                                                                                     gtagGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCTTATTTATCACTTAATGATTAAACTATTTAGCAGTTAAAGATAAAAAAATTg  <  2:491706‑M2/122‑1 (MQ=255)
                                                                                                                         |                                                                                                                         
TGCTATTTAAATTCTGGACTTGAGCAGCACTGCTGCGCAAGATAGCCTTTCCCTACATCTCCAAAGTTAACGTTACGTTATCTTTAGAGGGACCATGTGTCCATTATTTTGTCTAGGACCAGTTCAAGTGGGGTTTACTGGATGCTTACAAAATATGAGCCTAACTCAATAATTTTAAATATTAGTTAGGCTTATTTATCACTTAATGATTAAACTATTTAGCAGTTAAAGATAAAAAAATTG  >  ADP1‑WT/2727602‑2727844

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: