Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | ADP1‑WT | 321,574 | Δ1,237 bp | ACIAD0320–[ACIAD0323] | ACIAD0320, ACIAD0321, [ACIAD0323] |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | ADP1‑WT | 321574 | 322810 | 1237 | 44 [0] | [0] 44 | ACIAD0320–[ACIAD0323] | ACIAD0320,ACIAD0321,[ACIAD0323] |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | ADP1‑WT | = 321573 | 0 (0.000) | 44 (1.290) | 40/246 | 0.0 | 100% | noncoding (2/1237 nt) | IS1236 | repeat region |
? | ADP1‑WT | 322811 = | 0 (0.000) | coding (892/897 nt) | ACIAD0323 | LysR family transcriptional regulator |
TGAGATTTATTACAATCGAATCAGACGACATTCTACAAACGGCTGGTTAAGCCCAGAAGCCTTTGAACAGAAATATTTCAAGAATTTAGAGGGATTTGTTGTCCACGATACTGTCTAGGATCATGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTTTAACGGAATAATCATCAA > ADP1‑WT/322686‑322931 | gaaacgaatatggaagacgttcaacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgt < 1:237259‑M2/1‑1 (MQ=255) gaatatggaagacgttcaacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGt > 1:78006‑M2/121‑126 (MQ=255) atatggaagacgttcaacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCa < 1:154001‑M2/8‑1 (MQ=255) ggaagacgttcaacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTg > 2:213122‑M2/115‑126 (MQ=255) gaagacgttcaacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGc > 2:177533‑M2/114‑126 (MQ=255) gaagacgttcaacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGc > 2:327401‑M2/114‑126 (MQ=255) aagacgttcaacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCt < 1:152992‑M2/14‑1 (MQ=255) gacgttcaacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCttt > 2:456578‑M2/111‑126 (MQ=255) gacgttcaacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCttt < 2:195983‑M2/16‑1 (MQ=255) acgttcaacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTa < 1:174159‑M2/17‑1 (MQ=255) cgttcaacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTaa < 1:464410‑M2/18‑1 (MQ=255) tcaacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGa < 2:22255‑M2/21‑1 (MQ=255) caacagatggtgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGaa > 1:246119‑M2/105‑126 (MQ=255) tgaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGa < 2:441436‑M2/32‑1 (MQ=255) gaacacttcgcaacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGAc < 2:77921‑M2/33‑1 (MQ=255) caacaaagtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGAtgc > 2:272713‑M2/84‑126 (MQ=255) gtgcctaactcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTc < 1:332269‑M2/50‑1 (MQ=255) tcagtttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAg > 1:456537‑M2/68‑126 (MQ=255) tttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTAc > 2:427628‑M2/64‑126 (MQ=255) ttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACt > 1:348342‑M2/63‑126 (MQ=255) ttttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGATGCATTCACTCTTGAGCTACt > 1:197988‑M2/63‑126 (MQ=255) tttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACtt < 1:440553‑M2/65‑1 (MQ=255) tttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACtt > 2:496401‑M2/62‑126 (MQ=255) tttaactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACtt > 1:14560‑M2/62‑126 (MQ=255) taactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCt > 1:424024‑M2/60‑126 (MQ=255) aactaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCta > 1:155031‑M2/59‑126 (MQ=255) ctaggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCtata < 2:347863‑M2/70‑1 (MQ=255) ggacaaaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATaa < 1:343442‑M2/73‑1 (MQ=255) aaagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGa > 1:245377‑M2/49‑126 (MQ=255) aagaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGat > 1:48244‑M2/48‑126 (MQ=255) agaaagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGata < 2:245741‑M2/80‑1 (MQ=255) aagtagcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCa > 2:177438‑M2/44‑126 (MQ=255) ccgatcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCaa < 2:30530‑M2/84‑1 (MQ=255) agcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACgg < 1:327852‑M2/87‑1 (MQ=255) agcttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACgg < 1:177798‑M2/87‑1 (MQ=255) cttagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGAt > 1:173482‑M2/38‑126 (MQ=255) tagttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTagatatcaaagatcgg > 1:30570‑M2/36‑119 (MQ=255) agttggagttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATaaa > 1:263812‑M2/35‑126 (MQ=255) agttactttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGaa < 2:14544‑M2/98‑1 (MQ=255) ctttcatttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCttt > 2:476378‑M2/24‑126 (MQ=255) tttttatgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTTTAACgg > 1:33447‑M2/18‑126 (MQ=255) atgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTTTAACGGaataa < 1:273123‑M2/114‑1 (MQ=255) tgcaattgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTTTAACGGaataat < 2:245000‑M2/115‑1 (MQ=255) tgttgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAAGCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTTTAACGGAATAATCATCaa < 2:197686‑M2/121‑1 (MQ=255) | TGAGATTTATTACAATCGAATCAGACGACATTCTACAAACGGCTGGTTAAGCCCAGAAGCCTTTGAACAGAAATATTTCAAGAATTTAGAGGGATTTGTTGTCCACGATACTGTCTAGGATCATGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTTTAACGGAATAATCATCAA > ADP1‑WT/322686‑322931 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |