Predicted mutation
evidence seq id position mutation annotation gene description
MC JC ADP1‑WT 1,248,192 Δ1,237 bp ACIAD1249[csrA] ACIAD1249, ACIAD1250, [csrA]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ ADP1‑WT 1248192 1249428 1237 36 [0] [0] 37 ACIAD1249–[csrA] ACIAD1249,ACIAD1250,[csrA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? ADP1‑WT = 12481910 (0.000)36 (1.040) 32/250 0.2 100% intergenic (+164/+6) rnhB/ACIAD1249 ribonuclease HII/IS1236 transposase protein 2
?ADP1‑WT 1249429 = 0 (0.000)coding (175/213 nt) csrA carbon storage regulator

ATTAGCCGCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ADP1‑WT/1248069‑1248191
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGAACCTGATTACCTTTAACACCAAGCACAGTA  >  ADP1‑WT/1249429‑1249544
                                                                                                                                                                                                                                               
ATTAGCCGCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCAT                                                                                                                   >  2:458991/1‑126
   AGCCGCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCA                                                                                                                <  1:28000/126‑1
   AGCCGCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCA                                                                                                                <  1:44462/126‑1
   AGCCGCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCA                                                                                                                <  2:250738/126‑1
       GCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGC                                                                                                            <  2:240074/126‑1
        CTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCA                                                                                                           <  1:385077/126‑1
                 GGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGT                                                                                                  <  1:231326/126‑1
                   GAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTAATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTG                                                                                                >  2:194717/1‑126
                         AATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACG                                                                                          <  2:244429/126‑1
                            TAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTG                                                                                       <  2:305876/126‑1
                                      CTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTAATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCT                                                                             <  1:195011/126‑1
                                          AACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCAC                                                                         >  1:265959/1‑126
                                           ACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACG                                                                        >  1:152616/1‑126
                                               TTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGA                                                                    <  1:459653/126‑1
                                                TAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAA                                                                   <  2:311478/126‑1
                                                 AAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAAC                                                                  <  2:260387/126‑1
                                                  AAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACA                                                                 >  1:152626/1‑126
                                                    ATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGA                                                               <  2:464884/126‑1
                                                    ATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGA                                                               <  2:183021/126‑1
                                                       ATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGAC                                                            <  1:33818/126‑1
                                                        TTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACT                                                           >  1:29684/1‑126
                                                         TTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTT                                                          >  2:370217/1‑126
                                                         TTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTT                                                          >  2:68604/1‑126
                                                           TGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCT                                                        <  2:265559/126‑1
                                                              GAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTC                                                     <  2:457895/126‑1
                                                               AGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCG                                                    <  2:76822/126‑1
                                                                GTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGG                                                   <  1:84163/126‑1
                                                                 TAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGACAAATCTCTTCACGATGAACAGAGACTTCTTTCGGA                                                  >  2:98973/1‑126
                                                                     TATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCAT                                              >  1:252747/1‑126
                                                                                AAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATA                                   <  1:219937/126‑1
                                                                                   GAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGA                                <  1:441539/126‑1
                                                                                       GCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATGCGAACCT                            >  1:160842/1‑126
                                                                                        CTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGAACCTG                           <  2:29644/126‑1
                                                                                               TCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGAACCTGATTACCT                    >  1:245931/1‑126
                                                                                                           TGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGAACCTGATTACCTTTAACACCAAGC        >  2:278608/1‑126
                                                                                                                 AGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGAACCTGATTACCTTTAACACCAAGCACAGTA  <  2:346991/126‑1
                                                                                                                                                                                                                                               
ATTAGCCGCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ADP1‑WT/1248069‑1248191
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGAACCTGATTACCTTTAACACCAAGCACAGTA  >  ADP1‑WT/1249429‑1249544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.