Predicted mutation
evidence seq id position mutation annotation gene description
MC JC ADP1‑WT 321,574 Δ1,237 bp ACIAD0320[ACIAD0323] ACIAD0320, ACIAD0321, [ACIAD0323]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ ADP1‑WT 321574 322810 1237 44 [0] [0] 44 ACIAD0320–[ACIAD0323] ACIAD0320,ACIAD0321,[ACIAD0323]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? ADP1‑WT = 3215730 (0.000)44 (1.290) 40/246 0.0 100% noncoding (2/1237 nt) IS1236 repeat region
?ADP1‑WT 322811 = 0 (0.000)coding (892/897 nt) ACIAD0323 LysR family transcriptional regulator

GAAACGAATATGGAAGACGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ADP1‑WT/321449‑321573
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTTTAACGGAATAATCATCAA  >  ADP1‑WT/322811‑322931
                                                                                                                                                                                                                                                      
GAAACGAATATGGAAGACGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGT                                                                                                                          <  1:237259/126‑1
     GAATATGGAAGACGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGT                                                                                                                     >  1:78006/1‑126
       ATATGGAAGACGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCA                                                                                                                   <  1:154001/126‑1
           GGAAGACGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTG                                                                                                               >  2:213122/1‑126
            GAAGACGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGC                                                                                                              >  2:177533/1‑126
            GAAGACGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGC                                                                                                              >  2:327401/1‑126
             AAGACGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCT                                                                                                             <  1:152992/126‑1
               GACGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTT                                                                                                           >  2:456578/1‑126
               GACGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTT                                                                                                           <  2:195983/126‑1
                ACGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTA                                                                                                          <  1:174159/126‑1
                 CGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAA                                                                                                         <  1:464410/126‑1
                    TCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGA                                                                                                      <  2:22255/126‑1
                     CAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAA                                                                                                     >  1:246119/1‑126
                               TGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGA                                                                                           <  2:441436/126‑1
                                GAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGAC                                                                                          <  2:77921/126‑1
                                          CAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGC                                                                                >  2:272713/1‑126
                                                 GTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTC                                                                         <  1:332269/126‑1
                                                          TCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAG                                                                >  1:456537/1‑126
                                                              TTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTAC                                                            >  2:427628/1‑126
                                                               TTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACT                                                           >  1:348342/1‑126
                                                               TTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGATGCATTCACTCTTGAGCTACT                                                           >  1:197988/1‑126
                                                                TTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTT                                                          <  1:440553/126‑1
                                                                TTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTT                                                          >  2:496401/1‑126
                                                                TTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTT                                                          >  1:14560/1‑126
                                                                  TAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCT                                                        >  1:424024/1‑126
                                                                   AACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTA                                                       >  1:155031/1‑126
                                                                     CTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATA                                                     <  2:347863/126‑1
                                                                        GGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAA                                                  <  1:343442/126‑1
                                                                             AAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGA                                             >  1:245377/1‑126
                                                                              AAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGAT                                            >  1:48244/1‑126
                                                                               AGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATA                                           <  2:245741/126‑1
                                                                                  AAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCA                                        >  2:177438/1‑126
                                                                                   ccgatCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAA                                       <  2:30530/121‑1
                                                                                      AGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGG                                    <  1:327852/126‑1
                                                                                      AGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGG                                    <  1:177798/126‑1
                                                                                        CTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGAT                                  >  1:173482/1‑126
                                                                                          TAGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAAagatcgg                                >  1:30570/1‑119
                                                                                           AGTTGGAGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAA                               >  1:263812/1‑126
                                                                                                 AGTTACTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAA                         <  2:14544/126‑1
                                                                                                      CTTTCATTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTT                    >  2:476378/1‑126
                                                                                                            TTTTTATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTTTAACGG              >  1:33447/1‑126
                                                                                                                 ATGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTTTAACGGAATAA         <  1:273123/126‑1
                                                                                                                  TGCAATTGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTTTAACGGAATAAT        <  2:245000/126‑1
                                                                                                                        TGTTGTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAAGCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTTTAACGGAATAATCATCAA  <  2:197686/126‑1
                                                                                                                                                                                                                                                      
GAAACGAATATGGAAGACGTTCAACAGATGGTGAACACTTCGCAACAAAGTGCCTAACTCAGTTTTTAACTAGGACAAAAGAAAGTAGCTTAGTTGGAGTTACTTTCATTTTTATGCAATTGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ADP1‑WT/321449‑321573
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgTCCAGTCAATTGCTTTAATGAAGTTCCATAGACCTTCTGATGCTGCATTCAATCTTGAGCTACTTCTATATAAGTAGATATCAACGGATAAAACAGAATCTTTTAACGGAATAATCATCAA  >  ADP1‑WT/322811‑322931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.