Predicted mutation
evidence seq id position mutation annotation gene description
MC JC ADP1‑WT 941,306 Δ3,549 bp IS1236‑mediated ACIAD0952[ACIAD0959] ACIAD0952, ACIAD0953, ACIAD0955, ACIAD0956, ACIAD0957, ACIAD0958, [ACIAD0959]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ ADP1‑WT 941306 944854 3549 39 [0] [0] 39 ACIAD0952–[ACIAD0959] ACIAD0952,ACIAD0953,ACIAD0955,ACIAD0956,ACIAD0957,ACIAD0958,[ACIAD0959]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? ADP1‑WT = 9413050 (0.000)38 (1.100) 31/248 0.2 100% noncoding (1237/1237 nt) IS1236 repeat region
?ADP1‑WT 944855 = 0 (0.000)noncoding (2/1237 nt) IS1236 repeat region

TATTGAGAAAATGAAAATCAAATTTTACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTGATCCTAGACAGTATCGTGGACAACAAATCCCTCTAAATTCTTGAAATATTTCTGTTCAAAGGCTTCTGGGCTTAACCAGCCGTTTGTAGAATGTCGTCTGATTCGATTGTAATAAATCT  >  ADP1‑WT/941180‑941425
                                                                                                                             |                                                                                                                        
tatTGAGAAAATGAAAATCAAATTTTACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGT                                                                                                                          >  1:140617‑M1/1‑126 (MQ=255)
 atTGAGAAAATGAAAATCAAATTTTACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTc                                                                                                                         >  2:101650‑M1/1‑125 (MQ=255)
 atTGAGAAAATGAAAATCAAATTTTACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTc                                                                                                                         >  2:493542‑M1/1‑125 (MQ=255)
       aaaatgaaaatCAAATTTTACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattga                                                                                                                   <  1:459946‑M1/126‑8 (MQ=255)
       aaaatgaaaatCAAATTTTACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattga                                                                                                                   >  2:389527‑M1/1‑119 (MQ=255)
         aatgaaaatCAAATTTTACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgacc                                                                                                                 >  1:443509‑M1/1‑117 (MQ=255)
          atgaaaatCAAATTTTACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccg                                                                                                                >  1:205498‑M1/1‑116 (MQ=255)
          atgaaaatCAAATTTTACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccg                                                                                                                <  2:443541‑M1/126‑11 (MQ=255)
                 tCAAATTTTACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatc                                                                                                         <  2:200785‑M1/126‑18 (MQ=255)
                  cAAATTTTACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatca                                                                                                        <  2:456566‑M1/126‑19 (MQ=255)
                         tACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctctt                                                                                                 >  1:24887‑M1/1‑101 (MQ=255)
                                   gAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaa                                                                                       <  1:390089‑M1/126‑36 (MQ=255)
                                    aGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaa                                                                                      >  2:104234‑M1/1‑90 (MQ=255)
                                           tgATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtat                                                                               <  1:264654‑M1/126‑44 (MQ=255)
                                           tgATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtat                                                                               <  1:273531‑M1/126‑44 (MQ=255)
                                            gATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatt                                                                              <  1:375075‑M1/126‑45 (MQ=255)
                                              tatTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttt                                                                            <  2:379351‑M1/126‑47 (MQ=255)
                                              tatTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttt                                                                            >  2:25214‑M1/1‑80 (MQ=255)
                                                ttAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtattttta                                                                          <  1:276045‑M1/126‑49 (MQ=255)
                                                ttAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtattttta                                                                          <  1:197047‑M1/126‑49 (MQ=255)
                                                 tAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttag                                                                         <  2:447955‑M1/126‑50 (MQ=255)
                                                        aGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagc                                                                  >  1:167257‑M1/1‑70 (MQ=255)
                                                          tATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcct                                                                <  1:189633‑M1/126‑59 (MQ=255)
                                                                            ggTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctat                                              <  2:119077‑M1/126‑77 (MQ=255)
                                                                            ggTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtacttttagccagagcctgactcacttcatttctat                                              <  2:73085‑M1/126‑77 (MQ=255)
                                                                              tAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctatcg                                            <  1:321476‑M1/126‑79 (MQ=255)
                                                                              tAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctatcg                                            <  2:442874‑M1/126‑79 (MQ=255)
                                                                                            tAAAGATGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctatcgatagagttggtcac                              >  1:389545‑M1/1‑34 (MQ=255)
                                                                                                 aTGAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcgaagaggtatttttagccagagcctgactcacttcatttctatcgatagagttggtcactgttt                         <  2:180662‑M1/126‑98 (MQ=255)
                                                                                                   gAAAATTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctatcgatagagttggtcactgtttgt                       >  1:158907‑M1/1‑27 (MQ=255)
                                                                                                      aaTTGATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctatcgatagagttggtcactgtttgtgca                    <  2:205182‑M1/126‑103 (MQ=255)
                                                                                                          gATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctatcgatagagttggtcactgtttgtgcacgtg                >  2:2977‑M1/1‑20 (MQ=255)
                                                                                                          gATTATTTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctatcgatagagttggtcactgtttgtgcacgtg                <  1:25247‑M1/126‑107 (MQ=255)
                                                                                                           attattTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctatcgatagagttggtcactgtttgtgcacgtgt               >  2:70672‑M1/1‑19 (MQ=255)
                                                                                                           attattTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcccgactcacttcatttctatcgatagagttggtcactgtttgtgcacgtgt               >  2:67589‑M1/1‑19 (MQ=255)
                                                                                                            ttattTAATCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctatcgatagagttggtcactgtttgtgcacgtgtt              >  2:373808‑M1/1‑18 (MQ=255)
                                                                                                                  aaTCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctatcgatagagttggtcactgtttgtgcacgtgtttttaac        >  1:381013‑M1/1‑12 (MQ=255)
                                                                                                                  aaTCATTAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctatcgatagagttggtcactgtttgtgcacgtgtttttaac        >  2:441972‑M1/1‑12 (MQ=255)
                                                                                                                        tAAAGTcaattgaccgcttgatcagcctcttgtggtgtcaaagaggtatttttagccagagcctgactcacttcatttctatcgatagagttggtcactgtttgtgcacgtgtttttaacgtattt  <  1:104359‑M1/126‑121 (MQ=255)
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TATTGAGAAAATGAAAATCAAATTTTACAACTAGTGAGTCATGTGATATTAGGTTCAGTATTGATACATAAGTAATGGTAATCTAAATTGGCTAAAGATGAAAATTGATTATTTAATCATTAAAGTGATCCTAGACAGTATCGTGGACAACAAATCCCTCTAAATTCTTGAAATATTTCTGTTCAAAGGCTTCTGGGCTTAACCAGCCGTTTGTAGAATGTCGTCTGATTCGATTGTAATAAATCT  >  ADP1‑WT/941180‑941425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: