Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL606676,2630T→G24.7% 13.073788yleAisopentenyl‑adenosine A37 tRNA methylthiolase
Reads supporting (aligned to +/- strand):  new base (18/0):  ref base (20/35):  total (38/35)

TCAGAATGCGATCGGAACCACTCTGTACCGGCAGGTG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCGGTAC  >  REL606/676228‑676298
                                   |                                    
tCAGAATGCGATCGGAACCACTCTGTACCGGCAGGt                                      <  1:3040550/36‑1 (MQ=255)
 cAGAATGCGATCGGAACCACTCTGTACCGGCAGGTg                                     <  2:1399925/36‑1 (MQ=255)
 cAGAATGCGATCGGAACCACTCTGTACCGGCAGGTg                                     <  1:3633262/36‑1 (MQ=255)
  aGAATGCGATCGGAACCACTCTGTACCGGCAGGTG.c                                   <  2:1978905/36‑1 (MQ=255)
  aGAATGCGATCGGAACCACTCTGTACCGGCAGGTG.c                                   <  2:3080119/36‑1 (MQ=255)
   gAATGCGATCGGAACCACTCTGTACCGGCAGGTG.Ca                                  <  2:1728746/36‑1 (MQ=255)
   gAATGCGATAGTACCCACTCTGTACCGGCAGGTG.Ca                                  <  1:3685632/36‑1 (MQ=37)
    aaTGCGAACGGAACCACTCTGTACCGGCAGGTG.CAg                                 <  2:2138259/36‑1 (MQ=255)
     aTGCGATCGGAACCACTCTGTACCGGCAGGGG.CAgg                                >  1:479897/1‑36 (MQ=255)
      tGCGATCGGAACCACTCTGTACCGGCAGGGG.CGggg                               >  1:3363465/1‑35 (MQ=37)
      tGCGATCGGAACCACTCTGTACCGGCAGGGG.CAGGa                               >  2:3221054/1‑36 (MQ=255)
       gCGATCGGAACCACTCTGTACCGGCAGGTG.CAGGaa                              >  1:2928992/1‑36 (MQ=255)
       gCGATCGGAACCACTCTGCACCGGCAGGGG.CACGaa                              >  2:189605/1‑36 (MQ=25)
        cGATCGGAACCACTCTGTACCGGCAGGGG.CCGGAAg                             >  2:1324853/1‑36 (MQ=37)
         gATCGGAACCACTCTGTACCGGCAGGGG.CAGGAAgg                            >  1:3236018/1‑35 (MQ=255)
         gATCCGAACCACTCTGTACCGGCAGGGG.CAAGAAGc                            >  2:1264356/1‑36 (MQ=25)
         aaTCGGAACCACTCTGTACCGGCAGGTG.CAGGAAGc                            <  1:604604/35‑1 (MQ=255)
           tCGGAACCACTCTGTACCCGCAGGGG.CAGGGAGGTc                          >  2:2216457/1‑36 (MQ=19)
           ccGGAACCACTCTGTACCGGCAGGTG.CAGGAAGCTc                          <  2:2685628/35‑1 (MQ=255)
            cGGAACCACTCTGTACCGGCAGGGG.CAGGGAGGTCa                         >  2:3498946/1‑36 (MQ=37)
              gAATCACTCTGTACCGGCAGGTG.CAGGAAGGTCAcc                       <  2:1868285/36‑1 (MQ=37)
              gAACCGCTCTGTACCGGCAGGTG.CAGGAAGCTCAcc                       <  2:1889528/36‑1 (MQ=255)
              gAACCACTCTGGACCGGCAGGTG.CAGGAAGCTCAcc                       <  1:108053/36‑1 (MQ=255)
              gAACCACGCTGTACCGGCAGGTG.CAGGAAGCTCAcc                       <  2:1660001/36‑1 (MQ=255)
               aaCCACTCTGTACCGGCAGGTG.CGGGGAGATCACCa                      >  1:3067777/1‑36 (MQ=25)
               aaCCACTCTGTACCGGCAGGTG.CAGGAAGCTCACCa                      <  2:2590664/36‑1 (MQ=255)
               aaCCACTCTGTACCGGCAGGTG.CAGGAAGCTCACCa                      <  1:3009205/36‑1 (MQ=255)
               aaCCACTCTGTACCGGCAGGGGCCGGGAAGCTCCcc                       >  1:3056045/1‑36 (MQ=16)
               aaCCACGGTGTACCGGCAGGTG.CAGGAAGCTCACCa                      <  2:3386836/36‑1 (MQ=37)
                aCCACTCTGTACCGGCAGGTG.CAGGAAGCTCACCAg                     <  2:789227/36‑1 (MQ=255)
                aCCACTCTGTACCGGCAGGGG.GAGGAAGCTCACCat                     >  1:1026121/1‑35 (MQ=255)
                 ccACTCTGTACCGGCAGGTG.CAGGAAGCTCACCAGc                    <  2:1669090/36‑1 (MQ=255)
                 ccACTCTGTACCGGCAGGGG.GAGGAAGGTTAcccgg                    >  1:543668/1‑33 (MQ=255)
                 ccACTCTGTACCGGCAGGGG.GAGGAAGCTCACCacg                    >  1:2748583/1‑34 (MQ=255)
                 ccACTCTGTACCGGCAGGGG.CCGGAAGGTCCCCAGc                    >  2:1496879/1‑36 (MQ=19)
                 ccACTCTGTACCGGCAGGGG.CAGGGAGGTGACCCGc                    >  2:1631715/1‑36 (MQ=16)
                  cACTCTGTACCGGCAGGTG.CCGGAAGCTCACCAGCt                   >  1:3593507/1‑36 (MQ=255)
                   aCTCTGTACCGGCAGGGG.CAGGAAGCTCACCAGCTc                  >  1:2773837/1‑36 (MQ=255)
                    ctctGTACCGGCAGGTG.CAGGGAGCTCACCAGCTcc                 <  1:2332402/36‑1 (MQ=255)
                    ctctGTACCGGCAGGTG.CAGGAAGCTCCCCCGCTcc                 >  1:2983355/1‑36 (MQ=37)
                    ctctGTACCGGCAGGTG.CAGGAAGCTCACCCGCTcc                 >  1:1870783/1‑36 (MQ=255)
                    ctctGTACCGGCAGGTG.CAGGAAGCTCACCAGCTcc                 <  2:1160969/36‑1 (MQ=255)
                    ctctGTACCGGCAGGGG.CACGAAGCTCACCCGCCcc                 >  1:398971/1‑36 (MQ=19)
                     tctGTACCGGCAGGTG.CAGGAAGCTCCCCACCCCCg                >  2:1193675/1‑36 (MQ=21)
                      ctGTACCGGCAGGTG.CAGGAAGCTCACCAGCTCCgg               <  1:325537/36‑1 (MQ=255)
                       tGTACCGGCAGGTG.CAAGAAGCTCACCAGCTCCgcg              >  1:2228388/1‑34 (MQ=38)
                       tGTACCGGCAGGGG.CAGGAAGCTCACCAGCTCCGGc              >  2:1409160/1‑36 (MQ=255)
                        gTAGCGGCAGGTG.CAGGAAGCTCACCAGCTCCGGCg             <  2:836015/36‑1 (MQ=255)
                         tACCGGCGGGTG.CAGGAGGCTCACCAGCTCCGGCgt            <  1:2352375/36‑1 (MQ=37)
                         tACCGGCAGGTG.GAGGAAGGTCACCAGCTGCGCCgg            >  2:983692/1‑35 (MQ=16)
                         tACCGGCAGGTG.CAGGAAGCTCACCAGCTCCGGTgt            <  2:261604/36‑1 (MQ=255)
                         tACCGGCAGGTG.CAGGAAGCTCACCAGCTCCGGCgt            <  1:3192228/36‑1 (MQ=255)
                          aCCGGCAGGTG.GAGGAAGGTTACCAGCTTCGGCggg           >  2:2674539/1‑34 (MQ=16)
                           ccGGCAGGTG.CAGGAAGCTCACCAGCTCCGGCgtgt          <  2:3486332/36‑1 (MQ=255)
                           ccGGCAGGTG.CAGGAAGCTCACCAGCTCCGGCgtgt          <  1:1065205/36‑1 (MQ=255)
                            cGGCAGGTG.CAGGAAGCTCACCAGCTCCGGCgtgtt         >  1:1170797/1‑35 (MQ=255)
                            cGGCAGGTG.CAGGAAGCTCACCAGCTCCGGCgtgtt         >  1:1240459/1‑35 (MQ=255)
                            cGGCAGGTG.CAGGAAGCTCACCAGCTCCGGCGTGTc         <  2:312331/36‑1 (MQ=255)
                            cGGCAGGTG.CAGGAAGCTCACCAGCTCCGCGGTGTc         >  1:2963898/1‑36 (MQ=37)
                             ggCAGGTG.CAGGAAGCTCACCAGCTCCGGCGTGTcg        >  2:3455707/1‑36 (MQ=255)
                              gCAGGTG.CAGGAAGCTCACCAGCTCCGGCGTGTcgc       <  1:995392/36‑1 (MQ=255)
                               cAGGTG.CAGGAAGCTCACCAGCTCCGGCGTGTcgcg      >  2:824252/1‑36 (MQ=255)
                               cAGGTG.CAGGAAGCTCACCAGCTCCGGCGTGTcgcg      >  2:580413/1‑36 (MQ=255)
                               cAGGTG.CAGGAAGCTCACCAGCTCCAGCGTGTcgcg      >  2:1072216/1‑36 (MQ=255)
                                aGGTG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCgg     <  1:1861597/36‑1 (MQ=255)
                                aGGTG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCgg     >  1:2981078/1‑36 (MQ=255)
                                 ggTG.CAGGAAGCTCACCAGCTCCGGCGTGTCGGGGt    >  2:2469835/1‑36 (MQ=255)
                                 ggTG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCGGt    <  2:3362945/36‑1 (MQ=255)
                                 ggTG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCGGt    >  1:3017057/1‑36 (MQ=255)
                                 ggTG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCGGt    <  2:1213487/36‑1 (MQ=255)
                                  gTG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCNGNa   >  2:2304708/1‑36 (MQ=255)
                                  gTG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCGGTa   <  2:1020773/36‑1 (MQ=255)
                                  gTG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCGGTa   <  2:2166843/36‑1 (MQ=255)
                                  gTG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCGGTa   <  1:929892/36‑1 (MQ=255)
                                   tG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCGGTac  <  1:1864135/36‑1 (MQ=255)
                                   tG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCGGTac  >  2:2718759/1‑36 (MQ=255)
                                   |                                    
TCAGAATGCGATCGGAACCACTCTGTACCGGCAGGTG.CAGGAAGCTCACCAGCTCCGGCGTGTCGCGGTAC  >  REL606/676228‑676298

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 11 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG