New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 72407 =27 (0.610)4 (0.090) 4/56 5.1 9.1% coding (446/1701 nt) araB ribulokinase
?REL606 3650765 = 53 (0.960)intergenic (+46/+141) cspA/hokA major cold shock protein/toxic polypeptide, small
Rejected: Position hash score below cutoff.

CCACGCGCCGGGCAATGTTGACTACTCCCGCTATATTGGCGG...................................  <  REL606/72448‑72407
...................................TTGGCGGGGATTTTTTTATTTGTTTTCAGGAAATAAATAATC  >  REL606/3650765‑3650799
                                                                             
        CGGGCAATGTTGACTACTCCCGCTATATTGGCGGGG                                   >  1:444221/1‑36 (MQ=255)
             AATGTTGACTACTCCCGCTATATTGGCGGGGTTTTT                              >  1:3187424/1‑36 (MQ=255)
              ATGTTGACTACTCCCGCTATATTGGCGGGGTTTTTT                             >  2:2775125/1‑36 (MQ=255)
               TGTTGACTACTCCCGCTATATTGGCGGGGTTTTTTT                            >  1:1097612/1‑36 (MQ=255)
                                                                             
CCACGCGCCGGGCAATGTTGACTACTCCCGCTATATTGGCGG...................................  <  REL606/72448‑72407
...................................TTGGCGGGGATTTTTTTATTTGTTTTCAGGAAATAAATAATC  >  REL606/3650765‑3650799

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 14 ≤  ATCG  < 27 ≤  ATCG  < 32 ≤  ATCG