Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6061,029,2410T→C20.7% 11.558150pqiAparaquat‑inducible membrane protein A
Reads supporting (aligned to +/- strand):  new base (1/11):  ref base (32/14):  total (33/25)

ACGTTAACCGTGGCGTGGGATGCCCCTCGGCAGCGTCCCACCGCCTATGCGTTGGCTGCACTGTTCATGCT  >  REL606/1029206‑1029276
                                   |                                   
aCGTTAACCGTGGCGTGGGATGCCCCTCGGCAGCGt                                     <  1:1342009/36‑1 (MQ=255)
aCGTTAACCGTGGCGTGGGATGCCCCTCGGCAGCGt                                     <  1:2159042/36‑1 (MQ=255)
 cGTTAACCGTGGCGTGGGATGCCCCTCGGCAGCGTc                                    <  2:899759/36‑1 (MQ=255)
 cGTTAACCGTGGCGTGGGATGCCCCTCGGCAGCGTc                                    <  2:1263106/36‑1 (MQ=255)
  gTTATCCGGGGCGGGGGATGCCCCTCGGCAGCGTcc                                   <  2:3680314/36‑1 (MQ=25)
  gTTAACCGTGGCGTGGGATGCCCCTCGGCAGCGTcc                                   >  1:517838/1‑36 (MQ=255)
  gTTAACCGTGGCGTGGGATGCCCCTCGGCAGCGTcc                                   >  1:3296752/1‑36 (MQ=255)
  gTTAACCGTGGCGTGGGATGCCCCTCGGCAGCGTcc                                   >  1:2524636/1‑36 (MQ=255)
  gTTAACCGTGGCGTGGGATGCCCCTCGGCAGCGTcc                                   <  1:2086402/36‑1 (MQ=255)
  gTTAACCGTGGCGTGGGATGCCCCTCGGCACCCTcc                                   >  2:1062869/1‑36 (MQ=37)
   ttATCCGTGGCGTGGGATGCCCCTCGGCAGCGTccc                                  <  1:2454085/36‑1 (MQ=255)
   ttAACCGTGGCGTGGGATGCCCCTCGGCAGCGTccc                                  >  2:3736739/1‑36 (MQ=255)
    tAACCGTGGCGTGGGATGCCCCTCGGCAGCGTCCCa                                 <  1:3147178/36‑1 (MQ=255)
     aaCCGTGGCGTGGGATGCCCCTCGGCAGCGTccccc                                >  1:2049819/1‑34 (MQ=255)
     aaCCGTGGCGTGGGATGCCCCTCGGCAGCGTCCCAc                                >  1:778033/1‑36 (MQ=255)
     aaCCGTGGCGTGGGATGCCCCTCGGCAGCGTCCCAc                                >  1:1224224/1‑36 (MQ=255)
      aCCGTGGCGTGGGATGCCCCTCGGCAGCGTCCCAcc                               >  2:636306/1‑36 (MQ=255)
      aCCGTGGCGTGGGATGCCCCTCGGCAGCGTCCCAcc                               >  2:2583859/1‑36 (MQ=255)
       ccGTGGCGTGGGATGCCCCTCGGCAGCGTCCCACCg                              <  2:2276621/36‑1 (MQ=255)
        cgtggcgtggGATGCCCCTCGGCAGGGTCCCACCGc                             >  1:562852/1‑36 (MQ=255)
        cgtggcgtggGATGCCCCTCGGCAGCGTCTCACCGc                             >  1:250922/1‑36 (MQ=255)
        cgtggcgtggGATGCCCCTCGGCAGCGTCCCACCGc                             >  1:2630575/1‑36 (MQ=255)
         gtggcgtggGATGCCCCTCGGCAGCGTCCCACCGcc                            >  1:903831/1‑36 (MQ=255)
          tggcgtggGATGCCCCTCGGCAGCGTCCCACCGCCt                           <  1:788149/36‑1 (MQ=255)
          tggcgtggGATGCCCCTCGGCAGCGTCCCACCGCCt                           <  2:2722989/36‑1 (MQ=255)
          tggcgtggAATGCCCCCCGGCAGCGTCCCACCGCCt                           <  1:2263065/36‑1 (MQ=37)
           ggcgtggGATGCCCCTCGGCAGCGTCCCACCGCCTa                          <  2:625994/36‑1 (MQ=255)
           gacgtgaGATCCCCCTCGGCAGCGTCCCACCGCCTa                          <  1:1069723/34‑1 (MQ=37)
            gcgtggGATGCCCCTCGGCAGCGTCCCACCGCCCAt                         >  1:2391260/1‑36 (MQ=255)
             ggtggGTTCCCCCCCGGCGGCGCCCCCCCGCCTATg                        <  2:3052532/35‑1 (MQ=9)
             ggtggGACGCCCCGCGGGGGCCCCCCCCCGCCTATg                        <  2:146791/35‑1 (MQ=255)
              gtggGATGCCCCTCGGCCGCGCGCCCCCGCCTATGc                       >  2:1480722/1‑36 (MQ=19)
              gtggGATGCCCCTCGGCAGCGTCCCACCGCCTATGc                       >  2:2841551/1‑36 (MQ=255)
               tggGATGCCCCTCGGCAGCGTCCCACCGCCTATTCg                      >  2:3377299/1‑36 (MQ=255)
               tggGATGCCCCTCGGCAGCGTCCCACCGCCTATGCg                      >  2:2062804/1‑36 (MQ=255)
                gggACGCCCCTCGGCTGCGTCCCCCCGCCTATGCGt                     <  2:2886857/36‑1 (MQ=25)
                 ggATGCCCCTCGGCAGCGTCCCACCGCCTATGCgct                    >  1:2195718/1‑34 (MQ=255)
                 ggACGCCCCCCGCCAGCCCCCCACCGCCTATGCGtt                    <  2:418723/36‑1 (MQ=16)
                  gATGCCCCTCGGCAGCGTCCCCCCGCCTCTGCGTTg                   >  1:3312994/1‑36 (MQ=37)
                  gATGCCCCTCGGCAGCGTCCCACCGCCTATGCGTTg                   >  1:1542674/1‑36 (MQ=255)
                   cccccccCCGGCACCCCCCCCCCGCCTATGCGTTgg                  <  2:3352693/33‑1 (MQ=12)
                   accccccCCGCCAGCCCCCCCCCGCCTATGCGTTgg                  <  2:1115408/33‑1 (MQ=12)
                   accccccCCGCCACCGCCCCCCCGCCTATGCGTTgg                  <  2:2980712/33‑1 (MQ=12)
                    tcccccCCGCCAGCGCCCCCCCGCCTATGCGTTGGc                 <  2:1326233/34‑1 (MQ=12)
                     cccccTCGCCACCCCCCCCCCGCCTATGCGTTGGCt                <  2:2485577/35‑1 (MQ=16)
                      ccccTGGGCAGCGCCCCCCCGCCTATGCGTTGGCTg               <  2:1643442/36‑1 (MQ=25)
                        ccTCGGCAGCGTCCCACCGCCTATGCGTTGGCCGCa             >  2:1703385/1‑36 (MQ=255)
                         cTCGGCAGCGTCCCACCGCCTATGCGTTGGCTGCAc            >  1:1339821/1‑36 (MQ=255)
                         cTCGGCAGCGTCCCACCGCCTATGCGTTGGCTGCAc            >  1:2450287/1‑36 (MQ=255)
                         cTCGGCAGCGTCCCACCCCCTATGCGTTGGCTggat            >  1:204654/1‑33 (MQ=37)
                         cTCGGCAGCGTCCCACCCCCTATGCCTTGGCCGCAc            >  1:632415/1‑36 (MQ=25)
                          tCGGCGGCGTCTCACCGCCTATGCGTTGGCTGCACt           <  2:2533038/36‑1 (MQ=37)
                          tCGGCAGCGTCCCACCGCCTATGCGTTGGCTGCCCt           >  2:2763698/1‑36 (MQ=255)
                            ggCAGCGTCCCACCGCCTATGCGTTGGCTGCACTGt         >  2:1317795/1‑36 (MQ=255)
                            gccAGCGCCCCCCCGCCTATGCGTTGGCTGCACTGt         <  1:1017103/34‑1 (MQ=25)
                               aGCGTCCCACCGCCTATGCGTTGGCTGCATTGTTCa      >  2:792092/1‑36 (MQ=255)
                               aGCGTCCCACCGCCTATGCGTTGGCTGCACTGTTCa      >  2:1448911/1‑36 (MQ=255)
                               aGCGTCCCACCGCCTATGCGTTGGCTGCACTGTTCa      >  1:1076344/1‑36 (MQ=255)
                                gCGCCCCCCCGCCTATGCGTTGGCTGCACTGTTCAt     <  2:3147252/36‑1 (MQ=37)
                                ccctCCCCCCGCCTATGCGTTGGCTGCACTGTTCAt     <  1:1134767/33‑1 (MQ=37)
                                  gTCCCACCGCCTATGCGTTGGCTGCACTGTTCAtgc   >  1:2677676/1‑36 (MQ=255)
                                  ctCCCCCCGCCTGTGCGTTGGCTGCACTGTTCAtgc   <  1:2626317/35‑1 (MQ=25)
                                   tCCCACCGCCTATGCGTTGGCTGCACTGTTCAtgct  >  2:2317942/1‑36 (MQ=255)
                                   tCCCACCGCCTATGCGTTGGCTGCACTGTTCAtgct  >  1:2448728/1‑36 (MQ=255)
                                   |                                   
ACGTTAACCGTGGCGTGGGATGCCCCTCGGCAGCGTCCCACCGCCTATGCGTTGGCTGCACTGTTCATGCT  >  REL606/1029206‑1029276

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 11 ≤  ATCG  < 25 ≤  ATCG  < 32 ≤  ATCG