Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL606642,5170T→G25.0% 10.556283lipAlipoyl synthase
Reads supporting (aligned to +/- strand):  new base (13/1):  ref base (12/30):  total (25/31)

ACCGTGGGCAACGTCACAGAACGGACAACGGCGGGTACAAATAGCGCCGAGGATCATAAACGTTGCTGTGC  >  REL606/642482‑642552
                                   |                                   
gccGGGGGCAACGTCACAGAACGGACAACGGCGGGt                                     <  1:1181658/35‑1 (MQ=255)
 ccGTGGGCAACGTCACAGAACGGACAACGGCGGGTa                                    <  2:1415974/36‑1 (MQ=255)
   gTGGGCAACGTCACAGAACGGACAACGACGCGGACa                                  >  1:2990990/1‑36 (MQ=37)
    tGGGCAACGTCACAGAACGGACAACGGCGGGTACaa                                 <  2:793936/36‑1 (MQ=255)
    tGGGCAACGTCACAGAACGGACAACGGCGGGGACaa                                 >  1:2016419/1‑36 (MQ=255)
     gggCAACGTCACAGAACGGACAACGGCGGGTACaaa                                <  1:1129104/36‑1 (MQ=255)
     gggCAACGTCACAGAACGGACAACGGCGGGGACcaa                                >  2:972545/1‑36 (MQ=37)
      ggCAACGTCACAGAACGGACAACGGCGGGGACAAAt                               >  2:105603/1‑36 (MQ=255)
       gCAACGACACAGAACGGACAACGGCGGGTACAAATa                              <  2:727871/36‑1 (MQ=255)
        cAACGTCACAGAACGGACAACGGCGGGTACAAATAg                             <  1:3235624/36‑1 (MQ=255)
        cAACGTCACAGAACGGACAACGGCGGGGAGAAAAAg                             >  1:2177286/1‑36 (MQ=25)
         aaCGTCACAGAACGGACAACGGCGGGGGCAAAAAgc                            >  1:2452129/1‑36 (MQ=25)
         aaCGTAACAGAACGGACAACGGCGGGTACAAATAgc                            <  1:791087/36‑1 (MQ=255)
         aaCGTAAAAGAACGGACAACGGCGGGTACAAATAgc                            <  1:277046/36‑1 (MQ=37)
          aCGTCACAGAACGGACAACGGCGGGGACAAATatgg                           >  1:861450/1‑33 (MQ=37)
           cGTCACAGAACGGACAACGGCGGGTACAAATAgcgc                          <  2:720609/36‑1 (MQ=255)
           cGTCACAGAACGGACAACGGCGGGGGCAAATAgcgc                          >  2:1557663/1‑36 (MQ=37)
              cacaGAACGGACAACGGCGGGTACAAATAGCGGCgg                       >  2:506015/1‑35 (MQ=255)
               acaGAACGGACAACGGCGGGTACAAATAGCGCCGAg                      <  2:502670/36‑1 (MQ=255)
                caGAACGGACAACGGCGGGGACAAAAAGCGCCGGgg                     >  2:2512284/1‑36 (MQ=25)
                caGAACGAACAACGGCGGGTACAAATAGCGCCGAgg                     <  1:3290027/36‑1 (MQ=255)
                aaGAACGGACAACGGCGGGTACAAATAGCGCCGAgg                     <  1:1364459/35‑1 (MQ=255)
                    aCGGACAACGGCGGGTACAAATAGCGCCGAGGATCa                 <  1:1766698/36‑1 (MQ=255)
                    aCGGACAACGGCGGGGACAAATAGCGCCGAGGATCa                 <  2:3337973/36‑1 (MQ=255)
                     cGGACAACGGCGGGTACAAATAGCGCCGAGGATCAt                <  1:2266966/36‑1 (MQ=255)
                     cGGACAACGGCGGGGAGAAATAGGGCCGAGGATCAt                >  2:3697582/1‑36 (MQ=25)
                       gACAACGGCGGGGACAAATAGCGCCGAGGGTTATaa              >  1:1121986/1‑36 (MQ=37)
                        aCAACGGCGGGTACAAATAGCGCCGAGGATCATaaa             <  2:1420584/36‑1 (MQ=255)
                        aCAACGGCGGGTACAAATAGCGCCGAGGATCATaaa             <  1:676698/36‑1 (MQ=255)
                         cAACGGCGGGTACAAATAGCGCCGAGGAGCATAAAc            <  2:3083829/36‑1 (MQ=255)
                         cAACGGCGGGGACAAAAAACGCCGAGGACCATAAAc            >  2:1388834/1‑36 (MQ=16)
                         cAACGACGGGTACAAATAGCGCCGAGGATCATAAAc            >  2:2240986/1‑36 (MQ=255)
                         aaaCGGCGGGTACAAATAGCGCCGAGGATCATAAAc            <  1:627054/35‑1 (MQ=255)
                          accggctgATAAAAATAGAGCCGAGGATCATAAACg           <  2:2810451/34‑1 (MQ=12)
                          aaCGGCGGGTACAAATAGCGCCGAGGATCATAAACg           <  2:1641944/36‑1 (MQ=255)
                          aaCGGCGGGTACAAATAGCGCCGAGGATCATAAACg           <  2:2180478/36‑1 (MQ=255)
                          aaCGGCGGGGACAAAAAGCGCCGCGGATCAAAAACg           >  2:1029109/1‑36 (MQ=16)
                           aCGGCGGGTACAAATAGCGCCGAGGGTCATACACGt          >  2:691320/1‑36 (MQ=37)
                            cggcggGTACAAATAGCGCCGAGGATCATAAACGtt         <  2:3427884/36‑1 (MQ=255)
                            cggcggGTACAAATAGCGCCGAGGATCATAAACGtt         <  1:1973685/36‑1 (MQ=255)
                             ggcggGTACAAATAGCGCCGAGGATCATAAACGTTg        >  2:3570749/1‑36 (MQ=255)
                             ggcggGTACAAATAGCGCCGAGGATCATAAACGTTg        >  1:1784272/1‑36 (MQ=255)
                             ggcggGTACAAATAGCGCCGAGGATCATAAACGTTg        >  2:1129716/1‑36 (MQ=255)
                              gcggGTACAAATAGCGCCGAGGATCATAAACGTTGc       <  1:3190391/36‑1 (MQ=255)
                              gcggGTACAAATAGCGCCGAGGATCATAAACGTTGc       >  2:1651868/1‑36 (MQ=255)
                               cggGTACAAATAGCGCCGAGGATCATAAACGTTGCt      >  1:2269154/1‑36 (MQ=255)
                               cggGTACAAATAGCGCCGAGGATCATAAACGTTGCt      <  2:1615302/36‑1 (MQ=255)
                                gggTACAAATAGCGCCGAGGATCATAAACGTTGCtg     >  1:1253478/1‑36 (MQ=255)
                                gggTACAAATAGCGCCGAGGATCATAAACGTTGCtg     >  2:338464/1‑36 (MQ=255)
                                 ggTACAAATAGCGCCGAGGATCATAAACGTTGCtgt    <  1:1069455/36‑1 (MQ=255)
                                 ggTACAAATAGCGCCGAGGATCATAAACGTTGCtgt    <  1:154905/36‑1 (MQ=255)
                                 ggTACAAATAGCGCCGAGGATCATAAACGTTGCtgt    <  1:1700007/36‑1 (MQ=255)
                                 ggTACAAATAGCGCCGAGGATCATAAACGTTGCtgt    <  2:403478/36‑1 (MQ=255)
                                  gTACAAATAGCGCCGAGGATCATAAACGTTGCtgtg   >  2:3639919/1‑36 (MQ=255)
                                  gTACAAATAGCGCCGAGGATCATAAACGTTGCtgtg   <  1:492137/36‑1 (MQ=255)
                                  gTACAAATAGCGCCGAGGATCATAAACGTTGCtgtg   <  2:774604/36‑1 (MQ=255)
                                  gTACAAATAGCGCCGAGGATCATAAACGTTGCtgtg   >  2:1395306/1‑36 (MQ=255)
                                   tACAAATCGCGCCGAGGATCATAAACGTTGCTCTGc  >  2:1432540/1‑36 (MQ=37)
                                   tACAAATAGCGCCGAGGATCATAAACGTTGCTGTGc  >  1:3717052/1‑36 (MQ=255)
                                   tACAAATAGCGCCGAGGATCATAAACGTTGCTGTGc  >  2:2537908/1‑36 (MQ=255)
                                   tACAAATAGCGCCGAGGATAATAAACGTTGCTGTGc  >  1:1262331/1‑36 (MQ=255)
                                   |                                   
ACCGTGGGCAACGTCACAGAACGGACAACGGCGGGTACAAATAGCGCCGAGGATCATAAACGTTGCTGTGC  >  REL606/642482‑642552

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 12 ≤  ATCG  < 27 ≤  ATCG  < 32 ≤  ATCG