Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
JC JC | REL606 | 3,015,771 | IS150 (–) +4 bp | coding (1192‑1195/1677 nt) | ECB_02816 → | KpsD protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2775877 | NA (NA) | 49 (0.940) | 33/66 | 0.2 | 98.0% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 3015771 = | 1 (0.200) | coding (1192/1677 nt) | ECB_02816 | KpsD protein | |||||
* | ? | REL606 | = 3015774 | 1 (0.150) | 55 (1.000) | 32/70 | 0.3 | 98.2% | coding (1195/1677 nt) | ECB_02816 | KpsD protein |
? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGACGCC > REL606/3894962‑3895002
|
cGTGTTTGGCTGTCCGACTTTTTGGGGTCAGTACAg < 1:3590656/36‑1 (MQ=11)
tgtTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 2:1872788/36‑1 (MQ=38)
ttATCTGTCCAACTTTTTGGGGTCAGTACAGActgt < 2:154055/36‑4 (MQ=11)
|
CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGACGCC > REL606/3894962‑3895002
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 8 ≤
ATCG
< 16 ≤
ATCG
< 29 ≤
ATCG
< 32 ≤
ATCG
|