Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6061,714,6340T→A19.5% 13.142intergenic (‑77/+89)ydhP/ECB_01628putative transport protein (MFS family); b1657_2/predicted transporter
Reads supporting (aligned to +/- strand):  new base (8/0):  ref base (13/20):  total (22/20)

AAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATA.ACAA.A..AAG.AGAAAACACTTTTGCCATTT  >  REL606/1714599‑1714669
                                   |                                        
aaaGTGGCGAAAGCATGACAGCAATCACAAAAAAAt                                          <  2:813474/36‑1 (MQ=255)
aaaGTGGCGAAAGCATGACAGCAATCACAAAAAAAt                                          <  2:3182082/36‑1 (MQ=255)
 aaGTGGCGAAAGCATGACAGCAATCACAAAAAAATg                                         <  1:2467451/36‑1 (MQ=255)
 aaGTGGCGAAAGCATGACAGCAATCACAAAAAAATg                                         >  2:1933954/1‑36 (MQ=255)
  aGTGGCGAAAGCATGACAGCAATCACAAAAAAATGa                                        <  1:3236354/36‑1 (MQ=255)
   gTGGCGAAAGCATGACAGCAATCACAAAAAAATGaa                                       <  1:1573828/36‑1 (MQ=255)
   gTGGCGAAAGCATGACAGCAATCACAAAAAAATGaa                                       <  2:342627/36‑1 (MQ=255)
   gTGGCGAAAGCATGACAGCAATCACAAAAAAATGaa                                       <  2:1360018/36‑1 (MQ=255)
    tGGCGAAAGCATGACAGCAATCACAAAAAAATGaaa                                      <  2:1526387/36‑1 (MQ=255)
     ggCGAAAGCATGACAGCAATCACAAAAAAATGaaaa                                     >  2:1805305/1‑36 (MQ=255)
     ggCAAAAGCATGACAGCAATCACAAAAAAATGaaaa                                     <  2:483131/36‑1 (MQ=255)
      gCGAAAGCATGACAGCAATCACAAAAAAATCAAAAt                                    >  2:3141871/1‑36 (MQ=255)
       cGAAAGCATGACAGCAATCACAAAAAAATGAAAATa                                   >  1:3063174/1‑36 (MQ=255)
         aaaGCATGACAGCAATCACAAAAAAATGAAAATA.Ac                                <  2:1773176/36‑1 (MQ=255)
          aaGCATGACAGCAATCACAAAAAAATGAAAATA.ACa                               >  1:3056805/1‑36 (MQ=255)
          aaGCATGACAGCAATCACAAAAAAATGAAAATA.ACa                               >  2:1708770/1‑36 (MQ=255)
           aGCATGACAGCAATCACAAAAAAATGAAAATA.ACaa                              <  2:3268685/36‑1 (MQ=255)
            gCATGACAGCAATCACAAAAAAATGAAAATA.ACaa.a                            <  1:1927899/36‑1 (MQ=255)
            gCATGACAGCAATCACAAAAAAATGAAAATA.ACaa.a                            <  1:685961/36‑1 (MQ=255)
            gCATGACAGCAATCACAAAAAAATGAAAATA.ACaa.a                            <  2:3045980/36‑1 (MQ=255)
                gACAGCAATCACAAAAAAATGAAAATA.ACAA.A..Aag.a                     >  1:913977/1‑36 (MQ=255)
                 aCAGCAATCACAAAAAAATGAAAATA.ACAA.A..Aag.ag                    <  1:3067787/36‑1 (MQ=255)
                   aGCAATCACAAAAAAATGAAAATA.ACAA.A..AAG.AGaa                  <  2:2039777/36‑1 (MQ=255)
                   aGCAAACACAAAAAAATGAAAATA.ACAA.A..AAG.AGaa                  <  2:1001216/36‑1 (MQ=255)
                       ataacaAAAAAATGAAAATA.ACAA.A..AAG.AGAAAaca              <  1:1362568/33‑1 (MQ=255)
                        aaacaAAAAAAAGAATAGA.A.AA.A..AAG.AAAAAagaca            >  2:3300540/3‑35 (MQ=2)
                        aaacaAAAAAAACAAAACA.AAAA.A..AAA.AAAAAacaa             >  2:3698980/3‑35 (MQ=2)
                         aaaaaaaaaaAAAAAAAA.ACAACA..AAG.AGAAAaaac             >  2:3233485/4‑36 (MQ=9)
                          acaAAATAATGATAATA.ACAA.A..AAG.AGAAAACACtt           <  1:320926/36‑1 (MQ=37)
                          acaAAAAAATGAAAATA.ACAA.A..AAG.AGAAAATACtt           >  1:646812/1‑36 (MQ=255)
                          acaAAAAAATGAAAATA.ACAA.A..AAG.AGAAAACACtt           >  1:27437/1‑36 (MQ=255)
                          acaAAAAAAAGAAAA.G.ACAA.A..AAG.AACAAacacaca          >  2:3300481/1‑33 (MQ=2)
                          acaAAAAAAAAAAAAAA.ACAA.A..AAA.AAAAAacacaa           >  2:3375812/1‑34 (MQ=2)
                          aaaaaaaaaAAAAAAAA.ACAA.AAGAAG.AGAAAacaa             >  2:3291057/3‑35 (MQ=2)
                          aaaaaaaaaAAAAAAAA.AAAA.A..AAGAAGAAAacaca            >  1:2720042/3‑35 (MQ=2)
                           caAAAAAATGAAAATA.ACAA.A..AAG.AGAAAACACttt          <  2:1920766/36‑1 (MQ=255)
                           caAAAAAATGAAAATA.ACAA.A..AAG.AGAAAACACttt          <  2:730646/36‑1 (MQ=255)
                           caAAAAAATGAAAAAA.AAAA.G..AAG.CAAAAaaacaag          >  2:2805016/1‑33 (MQ=0)
                           aaaaaaaaGGAAAAAAGAGAA.A..AAG.ATAAAacacaa           >  2:3224322/2‑34 (MQ=0)
                            aaaaaaaAAAAAAAA.AAAA.A..AAA.AGAAAACACtaga         >  2:3223561/1‑33 (MQ=9)
                                aaaTGAAAATA.ACAA.A..AAG.AGAAAACACTTTTGCCa     >  1:673315/1‑36 (MQ=255)
                                  aTGAAAATA.ACAA.A..AAG.AGAAAACACTTTTGCCAtt   <  1:583272/36‑1 (MQ=255)
                                  aTGAAAATA.ACAA.A..AAG.AGAAAACACTTTTGCCAtt   >  1:3628012/1‑36 (MQ=255)
                                  aTGAAAATA.ACAA.A..AAG.AGAAAACACTTTAGCCAtt   >  2:3105309/1‑36 (MQ=255)
                                   tGAAAATA.ACAA.A..AAG.AGAAAACACTTTTGCCAttt  >  2:1001481/1‑36 (MQ=255)
                                   tGAAAATA.ACAA.A..AAG.AGAAAACACTTTTGCCAttt  >  2:2555167/1‑36 (MQ=255)
                                   tGAAAATA.ACAA.A..AAG.AGAAAACACTTTTGCCAttt  <  1:46708/36‑1 (MQ=255)
                                   |                                        
AAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATA.ACAA.A..AAG.AGAAAACACTTTTGCCATTT  >  REL606/1714599‑1714669

Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 16 ≤  ATCG  < 27 ≤  ATCG  < 32 ≤  ATCG