New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 547699NA (NA)52 (0.940) 27/70 0.7 NA noncoding (1/768 nt) IS1 repeat region
?REL606 555924 = NA (NA)coding (1209/2346 nt) ECB_00513 conserved hypothetical protein

ACACTAAATCAGTAAGTTGGCAGCATCACCACCGAA  >  REL606/547670‑547705
                             |      
acacTAAATCAGTAAGTTGGCAGCATCaccaccaac  >  2:3082397/1‑33 (MQ=255)
                             |      
ACACTAAATCAGTAAGTTGGCAGCATCACCACCGAA  >  REL606/547670‑547705

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 6 ≤  ATCG  < 22 ≤  ATCG  < 32 ≤  ATCG