New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 3630716NA (NA)31 (0.560) 22/70 1.2 NA intergenic (‑171/‑305) ldrD/yhjV toxic polypeptide, small/predicted transporter
?REL606 = 3652533 NA (NA)noncoding (1443/1443 nt) IS150 repeat region

GGGATAAAGCCCCCGCAACATTGCGCCTCACCGG.............................  >  REL606/3630683‑3630716
..................................TGTACTGACCCCAAAAAGTTGGACAGTTA  <  REL606/3652533‑3652505
                                                               
GGGATAAAGCCCCCGCAACATTGCGCCTCACCGGTG                             >  2:736525/1‑36 (MQ=1)
GGGATAAAGCCCCCGCAACATTGCGCCTCACCGGTG                             <  2:616154/36‑1 (MQ=1)
GGGATAAAGCCCCCGCAACATTGCGCCTCACCGGTG                             >  2:1823770/1‑36 (MQ=1)
   ATAAAGCCCCCGCAACATTGCGCCTCACCGGTGTAC                          >  2:3047914/1‑36 (MQ=38)
   ATAAAGCCCCCGCAACATTGCGCCTCACCGGTGTAC                          <  1:960335/36‑1 (MQ=38)
     AAAGCCCCCGCAACATTGCGCCTCACCGGTGTACTG                        >  1:1764078/1‑36 (MQ=32)
     AAAGCCCCCGCAACATTGCGCCTCACCGGTGTACTG                        <  2:221765/36‑1 (MQ=32)
         CCCCCGCAACATTGCGCCTCACCGGTGTACTGACac                    >  2:2823243/1‑34 (MQ=1)
         CCCCCGCAACATTGCGCCTCACCGGTGTACTGACCC                    >  2:1200971/1‑36 (MQ=1)
          CCCCGCAAGATTGCGCCTCACCGGTGTACTGACCCC                   <  1:1106860/36‑1 (MQ=0)
          CCCCGCAACATTGCGCCTCACCGGTGTACTGACCCC                   >  1:309842/1‑36 (MQ=1)
          CCCCGCAACATTGCGCCTCACCGGTGTACTGACCCC                   <  1:1096659/36‑1 (MQ=1)
            CCGCAACATTGCGCCTCACCGGTGTACTGACCCCAA                 <  1:214556/36‑1 (MQ=1)
            CCGCAACATTGCGCCTCACCGGTGTACTGACCCCAA                 <  1:2208583/36‑1 (MQ=1)
               CAACATTGCGCCTCACCGGTGTACTGACCCCAAAAA              >  2:2060548/1‑36 (MQ=1)
                 ACATTGCGCCTCACCGGTGTACTGACCCCAAAAAGT            >  2:942818/1‑36 (MQ=1)
                 ACATTGCGCCTCACCGGTGTACTGACCCCAAAAAGT            >  2:1699538/1‑36 (MQ=1)
                   ATTGCGCCTCACCGGTGTACTGACCCCAAAAAGTTG          <  1:901504/36‑1 (MQ=1)
                    TTGCGCCTCACCGGTGTACTGACCCCAAAAAGTTGG         >  2:942286/1‑36 (MQ=1)
                    TTGCGCCTCACCGGTGTACTGACCCCAAAAAGTTGG         >  2:1330540/1‑36 (MQ=1)
                    TTGCGCCTCACCGGTGTACTGACCCCAAAAAGTTGG         >  1:716413/1‑36 (MQ=1)
                     TGCGCCTCACCGGTGTACTGACCCCAAAAAGTTGGA        >  2:2636348/1‑36 (MQ=1)
                     TGCGCCTCACCGGTGTACTGACCCCAAAAAGTTGGA        >  1:2614902/1‑36 (MQ=1)
                       CGCCTCACCGGTGTACTGACCCCGAAAAGTTGGACA      >  2:338778/1‑36 (MQ=0)
                       CGCCTCACCGGTGTACTGACCCCAAAAAGTTGGACA      >  2:526839/1‑36 (MQ=1)
                        GCCTCACCGGTGTACTGACCCCAAAAAGTTGGACAG     <  1:1466789/36‑1 (MQ=1)
                         CCTCACCGGTGTACTGACCCCAAAAAGTTGGACAGT    <  1:2564109/36‑1 (MQ=1)
                         CCTCACCGGTGTACTGACCCCAAAAAGTTGGACAGT    >  1:981675/1‑36 (MQ=1)
                          CTCACCGGTGTACTGACCCCAAAAAGTTGGACAGTT   <  2:2136941/36‑1 (MQ=1)
                          CTCACCGGTGTACTGACCCCAAAAAGTTGGACAGTT   >  1:90138/1‑36 (MQ=1)
                           TCACCGGTGTACTGACCCCAAAAAGTTGGACAGTTA  >  1:2132306/1‑36 (MQ=1)
                                                               
GGGATAAAGCCCCCGCAACATTGCGCCTCACCGG.............................  >  REL606/3630683‑3630716
..................................TGTACTGACCCCAAAAAGTTGGACAGTTA  <  REL606/3652533‑3652505

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 24 ≤  ATCG  < 30 ≤  ATCG  < 32 ≤  ATCG