Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6064,463,0140C→T38.4% 104.0130252yjgNconserved inner membrane protein
Reads supporting (aligned to +/- strand):  new base (2/46):  ref base (26/51):  total (29/101)

Only 100 of 135 total aligned reads displayed.

AATGTTTTTTTTA.GTTG.TCTTG.T.TT.TTGTTTTTTTCTATTTCGCAATATTAATGACAGTGTCAGCAGATA  >  REL606/4462979‑4463048
                                        |                                  
tttGTTTTTTTTT.TTTC.TCTT..T.TT.TTCTTTTCTTCt                                   <  2:3690020/34‑1 (MQ=0)
tctGTTTTTTCTT.TTTT.TTTTT.T.TT.TTGTTTTTTTc                                    <  1:2720065/34‑1 (MQ=0)
tcggTTTTTTTGT.GTTT.TTTGT.T.TT.TTGTTTTTTTc                                    <  1:3561262/33‑1 (MQ=2)
gaTGTTTTTTTTA.GTTG.TCTTG.T.TT.TTGTTTTTTTc                                    <  1:834183/35‑1 (MQ=255)
cttGTTTTTTTTT.TTTC.TTTTT.T.TT.TTTTTTTTTTc                                    <  2:2801217/34‑1 (MQ=2)
aaTGTTTTTTTTA.GTTG.TCTTG.T.TT.TTGTTTTTTTc                                    <  2:68791/36‑1 (MQ=255)
 tttttttttttT.TTTG.TCTTC.T.TT.TTTTTTTTTTCt                                   <  1:3035830/33‑1 (MQ=12)
 aTGTTTTTTTTA.GTTG.TCTTG.T.TT.TTGTTTTTTTCt                                   >  1:1883715/1‑36 (MQ=255)
 aTGTTTTTTTTA.GTTG.TCTTG.T.TT.TTGTTTTTTTCt                                   <  2:3421301/36‑1 (MQ=255)
  tGTTTTTTTTT.GTT..TTTTG.T.TT.TTTTTTTTTTCttt                                 <  2:3048620/36‑3 (MQ=0)
  tGTTTTTTTTG.TTTT.TTTTG.T.TT.TTTTTTTTTTCtt                                  <  2:3561214/36‑2 (MQ=2)
  tGTTTTGTTTT.GTT..TTTTG.T.TT.TT.TTTTTTTCTTtt                                <  2:3634458/36‑1 (MQ=16)
   tttttttttT.GTTG.T.TT..T.TT.GTGTTTTTTTTTTttt                               <  2:2959544/35‑1 (MQ=2)
   tttttttttA.GTTG.TCTTG.T.TT.TTGTTTTTTTCttt                                 >  2:3728621/2‑34 (MQ=255)
   ttttttttgT.GTTGTTGTTT.T.TT.TTGTTTTTTTCtt                                  <  2:3580975/35‑2 (MQ=2)
   tttttttctT.TTTT.TCTTT.T.TT.TTCTTTTTTTCttt                                 <  2:3525606/35‑3 (MQ=2)
   tttttttctT.TTTG.TTTTGTT.TT.TTGTTTTTTTCtt                                  <  2:3290979/35‑2 (MQ=12)
   tttttttctC.GTT..TCTTC.T.TT.TT.TTTTTTTCTTttt                               <  1:3479325/35‑1 (MQ=0)
   gTTTTTTTTATCTTT.TTTTT.T.TT.TTTTTTTTTTCtt                                  <  1:3141462/36‑2 (MQ=9)
   gTTTTTTTTA.GTTG.TCTTG.T.TT.TTGTTTTTTTCTAt                                 <  2:2498419/36‑1 (MQ=255)
   gTTTTTTGTT.GTTT.TTTTG.T.GT.CCGTTTTTTTCttt                                 <  2:2781155/36‑3 (MQ=2)
    ttttttttT.TTTG.T.TTG.T.TT.TT.TTTTTTTCTCtttt                              <  2:2831095/36‑2 (MQ=2)
    ttttttttG.TTTG.T.TTG.T.TT.TT.TTTTTTTCTTtttt                              <  2:2730337/36‑2 (MQ=0)
    ttttttttC.GTT..TTTTG.T.TC.TTTTTTTTTTCTTttt                               <  2:3580670/36‑1 (MQ=2)
    tttgttttA.GTT..TGTTG.T.TT.TTTTTTTTTTTTTttt                               <  2:3705812/36‑1 (MQ=2)
    tgttttttT.TTTG.T.TTC.T.TT.TTTTTTTTTTCTTttt                               <  2:2950219/34‑1 (MQ=2)
    gcttttttT.GTT..TTTTG.T.TT.TTTTTTTTTTTTTttt                               <  2:3328129/34‑1 (MQ=0)
     tttttttT.TTTG..CTTT.T.TT.TTTTTTTTTTCTAtttt                              <  2:3233796/36‑2 (MQ=2)
     tttttttT.GTTT.TGTTT.G.TT.TTGTTTTTTTTTTttt                               <  2:3268381/36‑1 (MQ=0)
     tttttttT.GTT..TTTTG.T.TT.TT.TTTTTTTGTAttttt                             <  2:2741429/36‑3 (MQ=9)
     tttttttG.TTTA.TTTTG.T.TT.TTGTTTTTTTTTTttt                               <  2:2730322/36‑1 (MQ=9)
     tttttttC.TTTT.TCTCT.T.TT.TTTTTTTTTTCTTttt                               <  2:3608443/36‑1 (MQ=0)
     tttttttA.GTTG.TCTTG.T.TT.TTGTTTTTTTTTAttt                               >  2:3395849/1‑36 (MQ=255)
     tttttttA.GTTG.TCTTG.T.TT.TTGTTTTTTTCTAttt                               >  2:840184/1‑36 (MQ=255)
     tgtttttT.GTTT.TTTTG.T.TT.TTTATTTTTTTTTttt                               <  2:3576177/34‑1 (MQ=0)
     tgtttttT.GTTG.TTTTT.T.TT.TTGTTTTTTTTTTttt                               <  1:3570334/34‑1 (MQ=2)
     tggttttT.GTTG.TTTTG.T.TT.TTTTTTTTTTTTTttt                               <  2:3366436/33‑1 (MQ=0)
     gttttttT.TTTG.TTGTT.T.TT.TTGTTTTTTTTTTttt                               <  2:2719734/35‑1 (MQ=0)
     gttttttG.TTTT.TGTTG.T.TT.TTTTTTTTTTTTTttt                               <  2:3233770/35‑1 (MQ=0)
     gttttttG.GTTT.TTTTT.T.TT.TTGTTTTTTTTTTttt                               <  2:3589004/35‑1 (MQ=2)
     gttttctA.GTTG...TTG.T.TT.TTGTTTTTTTTTTttttt                             <  2:3185326/35‑3 (MQ=2)
     cttttttT.GTTT.TTTTT.T.TT.TTGTTTTTTT.TAtttt                              <  2:3590183/35‑2 (MQ=0)
      ttttttT.TTTC.TGTTC.T.TT.TTGTTTTTTTTTCtttt                              <  2:3156278/36‑2 (MQ=2)
      ttttttT.GTTT.TGTGT.T.TT.TTGTTTTTTTTTTtttt                              <  2:3442072/36‑2 (MQ=0)
      ttttttT.GTCT.TTTTG.T.TG.TTTTTTTTTTTTAtttt                              <  2:3442224/36‑2 (MQ=2)
      ttttttT.CTTG.TCTT..T.TT.TTGTTTTTTTTTTttttt                             <  2:3059264/36‑3 (MQ=0)
      ttttttG.TTTG.TGTTG.T.TT.TTTTTTTTTTTTGtttt                              <  2:3156306/36‑2 (MQ=9)
      ttttttG.GTTT.TTTTG.T.TT.TTCTTTTTTTTTTtttt                              <  2:3290965/36‑2 (MQ=2)
      ttttttA.TTTT.TATTG.TGTT.TTTTTTTTTTCTCttt                               <  2:3376025/36‑1 (MQ=2)
      ttttttA.GTGC.TTTTG.T.TT.TTATTTATTTATTtttt                              <  2:2821279/36‑2 (MQ=0)
      tttttcT.GTTT.TTTTG.T.TT.TTTTTTCTTTTTAttgt                              <  2:3029695/36‑3 (MQ=0)
      tttttcT.GTAG.TTTTG.T.TT.TTTTTTTTTTTTTtttt                              <  2:3544286/36‑2 (MQ=0)
      tttgttT.GTTT.TCTTG.T.GT.TTGTTTTTTTTTTtttt                              <  2:3743520/36‑2 (MQ=2)
      ttgtttA.G.TG.TGTTG.T.TTGTTGTTTTTTTTTTTTTc                              <  2:3752070/33‑1 (MQ=0)
      gtttttT.GTTT.TGTTG.T.TT.TTTTTTTTTTTTTtttt                              <  2:3239265/35‑2 (MQ=2)
      gattttT.GTTT.TTTTG.T.TT.TTTTTTTTTTTTTtttt                              <  2:3717069/34‑2 (MQ=0)
       tttttT.GTTT.TCTT..T.TT.TGTTTTTTTTTTAtttttt                            <  2:3635151/36‑4 (MQ=12)
       tttttT.GTTG.TTTGT.T.TT.TTGTGTTTTTGTTttttt                             <  2:2960704/36‑3 (MQ=2)
       tttttT.CTTG.TCTTT.T.TG.TTTTTTTTTTTTTttttt                             <  2:2940924/36‑3 (MQ=9)
       tttttG.GTTG.TTTTA.T.TT.TTATTTGTTTTTTttttt                             <  2:3117471/36‑3 (MQ=2)
       tttttG.CTTG.TTTTT.T.TG.TTGTTTTTTTCTTttgtg                             <  2:3328790/36‑4 (MQ=0)
       tttttA.TTTG.TTGTT.T.TT.TTGTTTTTTTTTTttttt                             <  2:3300394/36‑3 (MQ=2)
       tttttA.GTTG.TTCTT.T.TT.TTGTCTTTTGTTAttttt                             <  2:3137025/36‑3 (MQ=0)
       tttttA.GTTG.TCTTG.T.TT.TTGTTTTTTTCTATTTct                             >  1:2475464/1‑35 (MQ=255)
        ttttT.GTTT.CCTTT.T.TT.TTGTTTTTTTTTTtttttt                            <  2:3580883/36‑4 (MQ=2)
        ttttT.GTTG.TCTGT.T.TT.TTTTTTTTTTTTTtttttt                            <  2:2911147/36‑4 (MQ=0)
        ttttAGGTTG.TTTTT.C.TT.TTGTTTTTTTTTTttttt                             <  2:2945409/36‑3 (MQ=2)
        ttttA.GTTG.TCTTG.T.TT.TTGTTTTTTTCTATTTCGc                            <  1:257317/36‑1 (MQ=255)
         tttA.GTTG.TCTTG.T.TT.TTGTTTTTTTCTATTTCGCa                           <  1:974633/36‑1 (MQ=255)
          ttA.GTTG.TCTTG.T.TT.TTGTTTTTTTCTATTTCTCaa                          >  2:3645837/1‑36 (MQ=255)
           tA.GTTG.TCTTG.T.TT.TTGTTTTTTTCTATTTCGCAat                         <  2:360651/36‑1 (MQ=255)
           tA.GTTG.TCTTG.T.TT.TTGTTTTTTTCTATTTCGCAat                         >  2:1133594/1‑36 (MQ=255)
            a.GTTG.TCTTG.T.TT.TTGTTTTTTTCTATTTCTCAata                        >  2:3439238/1‑36 (MQ=255)
            a.GTTG.TCTTG.T.TT.TTGTTTTTTTCTATTTCGCAata                        <  2:162197/36‑1 (MQ=255)
              gTTG.TCTTG.T.TT.TTGTTTTTTTCTATTTCGCAatat                       <  1:2821673/36‑1 (MQ=255)
               ttG.TCTTG.T.TT.TTGTTTGTTTCTATTTCGCAATAtt                      <  2:2683406/36‑1 (MQ=255)
                tG.TCTTG.T.TT.TTGTTTTTTTCTATTTCGCAATATTa                     <  2:3101595/36‑1 (MQ=255)
                tG.TCTTG.T.TT.TTGTTTTTTTCTATTTCGCAATATTa                     <  1:154748/36‑1 (MQ=255)
                tG.TCTTG.T.TT.TTGTTTTTTTCTATTTCGCAATATTa                     <  1:610406/36‑1 (MQ=255)
                tG.TCTTG.T.TT.TTGTTTTTTTCTATTTCGCAATATTa                     >  1:347989/1‑36 (MQ=255)
                 g.TCTTG.T.TT.TTGTTTTTTTCTATTTCGCAATATTaa                    >  2:670225/1‑36 (MQ=255)
                   tCTTG.T.TT.TTGTTTTTTTCTATTTCGCAATATTAAt                   >  2:55150/1‑36 (MQ=255)
                   tCTTG.T.TT.TTGTTTTTTTCTATTTCGCAATATTAAt                   >  1:3607742/1‑36 (MQ=255)
                    cTTG.T.TT.TTGTTTTTTTCTATTTCGCAATATTAATg                  >  2:926368/1‑36 (MQ=255)
                    cTTG.T.TT.TTGTTTTTTTCTATTTCGCAATATTAATg                  <  2:1556391/36‑1 (MQ=255)
                    cTTG.T.TT.TTGTTTTTTTCTATTTCGCAATATTAATg                  >  1:3386959/1‑36 (MQ=255)
                    cTTG.T.TT.TTGTTTTTTTATATTTAGAAATATTTATg                  >  1:3385393/1‑36 (MQ=19)
                      tg.t.tt.ttgttttTTTCTATTTCGCAATATTAATGAc                <  1:328005/36‑1 (MQ=255)
                         t.tt.ttttttttTTTTATTTCGCAATATTAATGACAg              >  2:3253840/1‑36 (MQ=37)
                         t.tt.ttgtttttTTCTATTTCGCAATATTAATGACAg              >  1:80790/1‑36 (MQ=255)
                           tt.ttgtttttTTCTATTTCGCAATATTAATGACAgt             <  1:1571200/36‑1 (MQ=255)
                            t.ttgtttttTTCTATTTCGCAATATTAATGACTgtg            >  2:1740765/1‑36 (MQ=255)
                            t.ttgtttttTTCTATTTCGCAATATTAATGACAgtg            >  1:2967728/1‑36 (MQ=255)
                              ttgtttttTTCTATTTCGTAATATTAATGACAgtgt           >  1:2442516/1‑36 (MQ=255)
                               tgtttttTTCTATTTCGCAATATTAATGACAGTGTc          <  1:2933530/36‑1 (MQ=255)
                                   tttttCTATTTCGCAATATTAATGACAGTGTcagca      >  1:3396687/1‑36 (MQ=255)
                                   tttttCTATTTCGCAATATTAATGACAGTGTcagca      <  1:2265981/36‑1 (MQ=255)
                                     tttCTATTTCGCAATATTAATGACAGTGACAGCAGa    >  2:2565425/1‑36 (MQ=255)
                                      ttCTATTTCGCATTATTAATGACAGTGTCAGCAGat   <  1:3147568/36‑1 (MQ=255)
                                       tCTATGTCGAAAGATTAATGACAGTGTCAGCAGata  <  2:1172074/36‑1 (MQ=37)
                                        |                                  
AATGTTTTTTTTA.GTTG.TCTTG.T.TT.TTGTTTTTTTCTATTTCGCAATATTAATGACAGTGTCAGCAGATA  >  REL606/4462979‑4463048

Base quality scores:  ATCG  < 3 ≤  ATCG  < 6 ≤  ATCG  < 11 ≤  ATCG  < 24 ≤  ATCG  < 32 ≤  ATCG