Predicted mutation
evidence seq id position mutation annotation gene description
RA REL606 3,248,957 A→T D764E (GAT→GAA infB ← translation initiation factor IF‑2

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6063,248,9570A→T100.0% 180.6 602292infBtranslation initiation factor IF‑2
Reads supporting (aligned to +/- strand):  new base (31/28):  ref base (1/0):  total (32/28)

AATCAGGTTATAGATGACGGAGTAGTAACGCAGATCCAGGCTTTCCGCTTCAATCACTTTACGTGC  >  REL606/3248924‑3248989
                                 |                                
aaTCAGGTTATAGATGACGGAGTAGTAACGCAGTTc                                >  1:1463210/1‑36 (MQ=255)
 aTCAGGTTATAGATGACGGAGTAGTAACGCAGTTcc                               >  1:1091858/1‑36 (MQ=255)
 aTCAGGTTATAGATGACGGAGTAGTAACGCAGTTcc                               >  2:1796891/1‑36 (MQ=255)
 aTCAGGTTATAGATGACGGAGTAGTAACGCAGTTcc                               <  1:163156/36‑1 (MQ=255)
 aTCAGGTTATAGATGACGGAGTAGTAACGCAGTTcc                               >  1:1347273/1‑36 (MQ=255)
 aTCAGGTTATAGATGACGGAGTAGTAACGCAGTTcc                               >  1:1506822/1‑36 (MQ=255)
  tCAGGTTATAGATGACGGAGTAGTAACGCAGTTCCa                              <  2:3679977/36‑1 (MQ=255)
  tCAGGTTATAGATGACGGAGTAGTAACGCAGATCCa                              >  1:1546425/1‑36 (MQ=255)
   cAGGTTATAGATGACGGAGTAGTAACGCAGTTTCAg                             >  2:945711/1‑36 (MQ=38)
   cAGGTTATAGATGACGGAGTAGTAACGCAGTTCCac                             >  1:1069693/1‑35 (MQ=255)
   cAGGTTATAGATGACGGAGTAGTAACGCAGTTCCAg                             >  2:1619626/1‑36 (MQ=255)
   cAGGTTATAGATGACGGAGTAGTAACGCAGTTCCAg                             <  2:2193298/36‑1 (MQ=255)
    aGGTTATAGATGTCGGAGTAGTAACGCAGTTCCAgg                            <  1:3310802/36‑1 (MQ=37)
    aGGTTATAGATGACGGAGTAGTAACGCAGTTCCAgg                            >  1:3213119/1‑36 (MQ=255)
    aGGTAAAAGAAGACGGAGTAGTAACGCAGTTCCAgg                            <  1:524410/36‑1 (MQ=19)
     ggTTATAGATGACGGAGTAGTAACGCAGTTCCAGGc                           >  1:2271294/1‑36 (MQ=255)
     ggTTATAGATGACGGAGTAGTAACGCAGTTCCAGGc                           <  1:1153052/36‑1 (MQ=255)
      gTTATAGATGACGGAGTAGTAGCGCAGTTCCAGGCt                          <  1:1482652/36‑1 (MQ=37)
      gTTATAGATGACGGAGTAGTAACGCAGTTCCAGGCt                          <  1:266355/36‑1 (MQ=255)
       ttATAGATGACGGAGTAGTCACGCCGTTCCAGGcct                         >  1:124373/1‑34 (MQ=18)
       ttATAGATGACGGAGTAGTAACGCAGTTCCAGGCtt                         <  2:316520/36‑1 (MQ=255)
       ttATAGATGACGGAGTAGTAACGCAGTTCCAGGCtt                         <  2:778750/36‑1 (MQ=255)
        tataGATGACGGAGTAGTAACGCAGTTCCAGGCttt                        >  1:514290/1‑36 (MQ=255)
         ataGATGACGGAGTAGTAACGCAGTTCCAGGGTTTc                       >  2:3459307/1‑36 (MQ=37)
         ataGATGACGGAGTAGTAACGCAGTTCCACGCCTTc                       >  2:2395009/1‑36 (MQ=37)
          taGATGACGGAGTAGTAACGCAGTTCCAGGCTTTcc                      <  1:1721017/36‑1 (MQ=255)
          taGATGACGGAGTAGTAACGCAGTTCCAGGCTTTcc                      <  2:1971208/36‑1 (MQ=255)
          taGATGACGGAGTAGTAACGCAGTTCCAGGCTTTcc                      <  1:1130055/36‑1 (MQ=255)
          taGATGACGGAGTAGTAACGCAGTTCCAGGCTTTcc                      <  1:775410/36‑1 (MQ=255)
           aGATGACGGAGTAGTAACGCAGTTCCAGGCTTTCCg                     >  1:1957473/1‑36 (MQ=255)
            gATGACGGAGTAGTAACGCAGTTCCAGGGTTTCCGc                    >  2:2512585/1‑36 (MQ=37)
             aTGACGGAGTAGTAACGCAGTTCCAGGCTTTTCggt                   >  1:495059/1‑34 (MQ=25)
              tGACGGAGTAGTAACGCAGTTCCAGGCTTTCCGCtt                  <  2:1109263/36‑1 (MQ=255)
              tGACGGAGTAGTAACGCAGTTCCAGGCTTTCCGCtt                  <  2:1129838/36‑1 (MQ=255)
               gACGGGGTAGTAACGCAGTTCCAGGCTTTCCGCTTc                 <  2:1406825/36‑1 (MQ=37)
               gACGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTc                 >  1:1129977/1‑36 (MQ=255)
               gACGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTc                 <  2:385514/36‑1 (MQ=255)
                aCGGAGTAGTAATGCAGTTCCAGGCTTTCCGCTTCa                >  2:282991/1‑36 (MQ=37)
                aCGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTCa                >  1:2555069/1‑36 (MQ=255)
                aCGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTCa                <  2:697637/36‑1 (MQ=255)
                aCGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTCa                <  1:2953276/36‑1 (MQ=255)
                   gAGTAGTAACGCAGTTCCAGGCTTTCCGCTTCaacc             >  1:53240/1‑34 (MQ=37)
                    agtagtAACGCAGTTCCAGGCTTTCCGCTTCAATCa            <  2:1790669/36‑1 (MQ=255)
                    agtagcAACGCAGTTCCAGGCTTCACGCTTAAATCa            >  2:1089073/1‑36 (MQ=12)
                     gtagtaACTCAGTTCCAGGCTTTCCGCTTCAATCAc           <  2:229619/36‑1 (MQ=37)
                      tagtaGCGCAGTTCCGGGCTTTCCGCTTCAATCACt          <  2:2894848/36‑1 (MQ=25)
                      tagtaACGCAGTTCCAGGCTTTCCGCTTCATTTACt          >  2:1079787/1‑36 (MQ=25)
                       agtaACGCAGTTCCAGGCTTTCCGCTTCAATCACtt         >  1:3491399/1‑36 (MQ=255)
                        gtaACGCAGTTCCAGGCTTTCCGCTTCAATCACttt        >  2:1935715/1‑36 (MQ=255)
                         taACGCAGTTCCAGGCTTTCCGCTTCAATCACTTTa       <  2:2554871/36‑1 (MQ=255)
                          aaCGCAGTTCCAGGCTTTCCGCTTCAATCACTTTAc      <  2:1613546/36‑1 (MQ=255)
                          aaCGCAGTTCCAGGCTTTCCGCTTCAATCACTTTAc      <  1:2154822/36‑1 (MQ=255)
                          aaCGCAGTTCCAGGCTTTCCGCTTCAATCACTTTAc      >  2:888112/1‑36 (MQ=255)
                            cGCAGTTCCAGGCTTTCCGCTTCAATCACTTTACGt    <  1:3172413/36‑1 (MQ=255)
                             gCAGTTCCAGGCTTTCCGCTTCAATCACTTTACGTg   >  1:18828/1‑36 (MQ=255)
                             gCAGTTCCAGGCTCTCCGCTTCAATCACTCTACGt  >  1:1044670/1‑35 (MQ=25)
                              cAGTTCCAGGCTTTCCGCTTCAATCACTTTACGttc  >  1:3367672/1‑34 (MQ=37)
                              cAGTTCCAGGCTTTCCGCTTCAATCACTTTACGTGc  >  1:1357485/1‑36 (MQ=255)
                              cAGTTCCAGGCTTTCCGCTTCAATCACTTTACGTGc  <  1:1355433/36‑1 (MQ=255)
                              cAGTTCCAGGCTTTCCGCTTCAATCACTTTACGTGc  >  1:2597024/1‑36 (MQ=255)
                                 |                                
AATCAGGTTATAGATGACGGAGTAGTAACGCAGATCCAGGCTTTCCGCTTCAATCACTTTACGTGC  >  REL606/3248924‑3248989

Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 18 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG