Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL60687,8120T→G38.5% 21.752641leuOleucine transcriptional activator
Reads supporting (aligned to +/- strand):  new base (20/0):  ref base (9/23):  total (29/23)

GAAACATGATGTTTATAACGAACAACATGCGGCGGTTTCGCTCGATCGTTTCGCGTCATTTAGTCAACCTT  >  REL606/87777‑87847
                                   |                                   
gtaaCATGATGTTTATAACGAACAACATGCGGCGGt                                     <  1:2338051/34‑1 (MQ=255)
gAAACATGATGTTTATAACGAACAACATGCGGCGGt                                     <  1:1107522/36‑1 (MQ=255)
 aaaCATGATGTTTATAACGAACAACATGCGGCGGtt                                    <  2:1589010/36‑1 (MQ=255)
  aaCATGATGTTTATAACGAACAACATGCGGCGGttt                                   <  2:3730040/36‑1 (MQ=255)
  aaCATGATGTTTATAACGAACAACATGCGGCGGttt                                   >  1:3397972/1‑36 (MQ=255)
   aCATGATGTTTATAACGAACAACATGCGGCGGgttt                                  >  1:432014/1‑35 (MQ=255)
   aCATGATGTTTATAACGAACAACATGCGGCGGgttg                                  >  2:3218795/1‑35 (MQ=255)
   aCATGATGTTTATAACGAACAACATGCGGCGGTTTc                                  <  2:2231025/36‑1 (MQ=255)
     atgatgTTTATAACGAACAACATGCGGCGGgtttgt                                >  2:2080086/1‑33 (MQ=25)
     atgatgTTTATAACGAACAACATGCGGCGGTTTTGc                                >  2:2485566/1‑36 (MQ=255)
     atgatgTTTATAACGAACAACATGCGGCGGTTTCGc                                <  2:650402/36‑1 (MQ=255)
      tgatgTTTATAACGAACAACATGCGGCGGTTTCGCt                               <  1:2568066/36‑1 (MQ=255)
       gatgTTTATAACGAACAACATGCGGCGGTTTCGCTc                              <  2:768970/36‑1 (MQ=255)
       gatgTTTATAACGAACAACATGCGGCGGTTTCGCTc                              <  1:3238881/36‑1 (MQ=255)
       gatgTTTATAACGAACAACATGCGGCGGTTTCCCTc                              >  2:1145689/1‑36 (MQ=255)
         tgTTTATAACGAACAACATGCGGCGGGTTTGCTCgt                            >  2:1548426/1‑35 (MQ=21)
          gTTTATAACGAACAACATGCGGCGGTTTCGCTCGAt                           <  1:686128/36‑1 (MQ=255)
          gTTTATAACGAACAACATACGGCGGTTTCGCTCGAt                           <  1:2870384/36‑1 (MQ=255)
           tttATAGCGAACAACATGCGGCGGTTTCGCTCGATc                          <  1:1681342/36‑1 (MQ=255)
           tttATAACGAACAACATGCGGCGGTTTCGCTCGATc                          <  2:2230744/36‑1 (MQ=255)
            ttATAACGAACAACATGCGGCGGGTTCGCTCGGTCg                         >  2:2086512/1‑36 (MQ=25)
             tataACGAACAACATGCGGCGGGTTCGCTCGCTcct                        >  1:970030/1‑34 (MQ=21)
             tataACGAACAACATGCGGCGGGTTCGCTCGATcct                        >  2:1709244/1‑34 (MQ=37)
               taACGAACAACATGCGGCGGTTTCGCTCGATCGttt                      <  2:1544272/36‑1 (MQ=255)
               taACGAACAACATGCGGCGGGTTCGCTCGATCGttt                      >  2:2316950/1‑36 (MQ=255)
                aaCGAACAACATGCGGCGGGTTTGCTTGCTCGTTTc                     >  1:1890047/1‑36 (MQ=12)
                aaCGAACAACATGCGGCGGGTTTGCTCGATCGtttt                     >  1:3411719/1‑35 (MQ=21)
                aaCGAACAACATGCGGCGGGTTCGGTCGTTTGtttt                     >  1:3193138/1‑35 (MQ=12)
                  cGAACGACATGCGGCGGTTTCGCTCGATCGTTTcgc                   <  2:2657363/36‑1 (MQ=255)
                  cGAACAACATGCGGCGGTTTCGCTCGCTCGttttgt                   >  1:1424491/1‑33 (MQ=25)
                  cGAACAACATGCGGCGGGTTTGCTCGATCCTTTcgc                   >  2:742666/1‑36 (MQ=18)
                    aacaacATGCGGCGGGTTTGGTCGGTCGTTTCGCGt                 >  2:3305297/1‑36 (MQ=12)
                    aacaacATGCGGCGGGTTTGGTCGGTCCTTTCGCGt                 >  2:1151433/1‑36 (MQ=9)
                    aacaacATGCGGCGGGTTCGCTCCCTCGTTTcccgc                 >  2:13479/1‑35 (MQ=16)
                     acaacaTGCGGCGGGTTTGCTCGATTGTTTCTCGTc                >  1:382669/1‑36 (MQ=16)
                     acaacaTGCGGCGGGTTCGCTCGTTCGTTTCGCGTc                >  1:2596306/1‑36 (MQ=37)
                     acaacaTGCGGCGGGTTCGCTCCATCGTTTCGCGTc                >  2:2555133/1‑36 (MQ=37)
                      caacaTGCGGCGGTTTCGCTCGATCGTTTCGCGTCa               <  2:517838/36‑1 (MQ=255)
                      caacaTGCGGCGGGTTCGCTCGGGCGGTTCGTGTcc               >  2:3279912/1‑35 (MQ=12)
                      caacaTACGGCGGTTTCGCTCGATCGTTTCGCGTCa               <  2:2893009/36‑1 (MQ=255)
                        acaTGCGGCGGTTTCGCTCGATCGTTTCGCGTCAtt             <  1:1548556/36‑1 (MQ=255)
                        acaTGCGGCGGGTTTGGTCGGTCGTTTTGCGTCAtt             >  2:3706405/1‑36 (MQ=16)
                        acaTGCGGCGGGTTTGCTCGCTCGTTTTGCGTCCtt             >  2:2876503/1‑36 (MQ=12)
                         caTGCGGCGGTTTCGCTCCATCGTTTCGCGTCCttt            >  2:587743/1‑36 (MQ=37)
                         caTGCGGCGGGTTTGCGCCGCCGTTTCGCGTCCttt            >  1:2401835/1‑36 (MQ=2)
                          aTGCGGCGGTTTCGCTCGATCGTTTCGCGTCATTTa           <  1:3141746/36‑1 (MQ=255)
                           tGCGGCGGTTTCGCTCGATCGTTTCGCGTCATTTAg          <  2:3700336/36‑1 (MQ=255)
                            gcggcgGGTTCGCTCGATCGTTTTGCGTCCTTTatt         >  2:595318/1‑34 (MQ=21)
                             cggcggTTTTGCTCGATTCTTTTGCGCCATTTATTc        >  2:1370947/1‑36 (MQ=9)
                             cggcggTTTCGCTCGGTGGTTTCGCGTCATTTAGTc        <  2:3721494/36‑1 (MQ=38)
                             cggcggTTTCGCTCGATCGTTTCGCGTCATTTAGTc        <  2:3703269/36‑1 (MQ=255)
                               gcggTTTCGCTTGATCGTTTCGCGTCATTTAGTCaa      <  1:2998878/36‑1 (MQ=255)
                               gcggTTTCGCTCGATCGTTTCGCGTCATTTAGTCaa      >  1:734978/1‑36 (MQ=255)
                                cggTTTCGCTCGATCGTTTCGCGTCATTTATTCAAc     >  2:111133/1‑36 (MQ=255)
                                cggTTTCGCTCGATCGTTTCGCGTCATTTAGTCAAc     <  1:2842226/36‑1 (MQ=255)
                                cggTTTCGCTCGATCGTTTCGCGTCATTTAGTCAAc     >  1:2854957/1‑36 (MQ=255)
                                cggTTTCGCTCGATCGTTTCGCGTCATTTAGTCAAc     <  1:1531304/36‑1 (MQ=255)
                                 ggTTTCGCTCGATCGTTTCGCGTCATTTAGTCAAcc    >  1:814174/1‑36 (MQ=255)
                                 ggTTTCGCTCGATCGTTTCGCGTCATTTAGTCAAcc    <  1:41125/36‑1 (MQ=255)
                                  gTTTCGCTCGATCGTTTCGCGTCATTTAGTCAACCt   <  1:1987751/36‑1 (MQ=255)
                                   tttCGCTCGATCGTTTCGCGTCATTTAGTCAACCtt  >  2:14121/1‑36 (MQ=255)
                                   tttCGCTCGATCGTTTCGCGTCATTTAGTCAACCtt  >  2:1501529/1‑36 (MQ=255)
                                   |                                   
GAAACATGATGTTTATAACGAACAACATGCGGCGGTTTCGCTCGATCGTTTCGCGTCATTTAGTCAACCTT  >  REL606/87777‑87847

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 10 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG