Predicted mutation
evidence seq id position mutation annotation gene description
RA REL606 3,045,069 G→T T312N (ACC→AAC)  yghJ ← predicted inner membrane lipoprotein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6063,045,0690G→T100.0% 88.8 28935yghJpredicted inner membrane lipoprotein
Reads supporting (aligned to +/- strand):  new base (21/7):  ref base (0/0):  total (21/7)

CCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTT  >  REL606/3045037‑3045101
                                |                                
ccAGTTCAAAGGTATCGATACCAAAGGAGATGTttt                               >  2:1162688/1‑36 (MQ=255)
 cAGTTCAAAGGTATCGATACCAAAGGAGATGTTTTc                              >  1:1427057/1‑36 (MQ=255)
 cAGTTCAAAGGTATCGATACCAAAGGAGATGTTTTc                              <  1:3610319/36‑1 (MQ=255)
  aGTTCAAAGGTATCGATACCAAAGGAGATGTTTTCg                             >  1:225670/1‑36 (MQ=255)
    ttCAAAGGTATCGATACCAAAGGAGATGTTATCGcc                           >  2:960075/1‑36 (MQ=37)
     tCAAAGGTATCGATACCAAAGGAGATGTTTTCGccc                          <  1:869611/36‑1 (MQ=255)
      cAAAGGTATCGATACCAAAGGAGATGTTTTCGcccc                         >  2:2532571/1‑36 (MQ=255)
         aGGTAACGATACCAAAGGAGATGTTTTCGCCCCAGc                      <  2:574306/36‑1 (MQ=37)
             aTCGATACCAAAGGAGATGTTTTCGCCCCAGCTaaa                  >  2:3287491/1‑36 (MQ=255)
             aTCGATACCAAAGGAGATGTTTTCGCCCCAGCTaaa                  >  1:296669/1‑36 (MQ=255)
             aTCGATACCAAAGGAGATGTTTTAGCCCCAGCTaaa                  >  2:117787/1‑36 (MQ=38)
              tCGATACCAAAGGAGATGTTTTCGCCCCAGCTAAAg                 <  2:340157/36‑1 (MQ=255)
               cGATACCAAAGGAGATGTTTTCGCCCCAGCTAAAgg                >  1:1503711/1‑36 (MQ=255)
               cGATACCAAAGGAGATGTTTTCGCCCCAGCTAAAgg                >  2:1509579/1‑36 (MQ=255)
               cGATACCAAAGGAGATGTTTTCGCCCCAGCTAAAgg                >  2:1131007/1‑36 (MQ=255)
                 aTACCAAAGGAGATGTTTTCGCCCCAGCTAAAGGaa              >  1:582933/1‑36 (MQ=255)
                 aTACCAAAGGAGATGTTTTCGCCCCAGCGAAAGGaa              <  2:622439/36‑1 (MQ=38)
                   aCCAAAGGAGATGTTTTCGCCCCAGCTAAAGGaaaa            >  1:2885438/1‑36 (MQ=255)
                   aCCAAAGGAGATGTTTTCGCCCCAGCTAAAGAaaaa            >  1:1287014/1‑36 (MQ=37)
                    ccAAAGGAGATGTTTTCGCCCCAGCTAAAGGAAAAt           <  2:366068/36‑1 (MQ=255)
                      aaaGGAGATGTTTTCGCCCCAGCGAAAGGAAAATTc         <  2:292035/36‑1 (MQ=38)
                        aGGAGATGTTTTCGCCCCAGCTAAAGGAAAATTCAc       >  1:1294933/1‑36 (MQ=255)
                          gagaTGTTTTCGCCCCAGCTAAAGGAAAATTCACCa     >  1:465226/1‑36 (MQ=255)
                          gagaTGTTTTCGCCCCAGCTAAAGGAAAATTCACCa     >  1:1122728/1‑36 (MQ=255)
                           agaTGTTTTCGCCCCAGCTAAAGGAAAATTCACCAt    >  1:400602/1‑36 (MQ=255)
                            gaTGTTTTCGCCCCAGCTAAAGGAAAATTCACCact   >  1:2738781/1‑34 (MQ=38)
                            gaTGTTTTCGCCCCAGCTAAAGGAAAATTCACCAtt   >  1:2751178/1‑36 (MQ=255)
                             aTGTTTTCGCCCCAGCTAAAGGAAAATCCACCAtct  >  1:2275473/1‑34 (MQ=37)
                                |                                
CCAGTTCAAAGGTATCGATACCAAAGGAGATGGTTTCGCCCCAGCTAAAGGAAAATTCACCATTT  >  REL606/3045037‑3045101

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 19 ≤  ATCG  < 30 ≤  ATCG  < 32 ≤  ATCG