Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6062,433,4540A→T19.7% 13.261559ypdApredicted sensory kinase in two‑component system with YpdB
Reads supporting (aligned to +/- strand):  new base (12/0):  ref base (22/27):  total (34/27)

CCAATGATCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAA  >  REL606/2433421‑2433489
                                 |                                   
ccAATGATCCTCGGTAGCGTCTGTATCGGCTTTTtt                                   >  2:302025/1‑36 (MQ=255)
 cAATGATCCTCGGTAGCGTCTGTATCGGCTTTTttt                                  >  1:2468860/1‑35 (MQ=255)
 cAATGATCCTCGGTAGCGTCTGTATCGGCTTTATtg                                  <  1:620975/36‑1 (MQ=255)
 cAATGATCCTCGGTAGCGTCTGTATCGGCCTTTttt                                  >  2:1771530/1‑35 (MQ=37)
  aaTGATCCTCGGTAGCGTCTGTATCGGCTTTTtttt                                 >  1:1857638/1‑34 (MQ=38)
  aaTGATCCTCGGTAGCGTCTGTATCGGCCTTTtttt                                 >  1:1955956/1‑34 (MQ=37)
   aTGATCCTCGGTAGCGTCTGTATCGGGTTTTttttt                                >  1:820145/1‑33 (MQ=25)
       tCCTCGGTAGCGTCTGTATCGGCTTTTTTTTTCttt                            >  1:1603237/1‑35 (MQ=21)
         cTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTg                          <  2:1380413/36‑1 (MQ=255)
          tctgTAGCGTCTGTATCGGCTTTATTGTGCTTCTgg                         <  1:2874595/33‑1 (MQ=255)
          tCGGTAGCGTCTGTAGCGGCTTTAGTGTGCTTCTgg                         <  2:2711934/36‑1 (MQ=37)
           cGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGt                        <  2:3201162/36‑1 (MQ=255)
            ggTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTg                       <  1:307187/36‑1 (MQ=255)
             gTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGc                      <  2:3158500/36‑1 (MQ=255)
              tAGGGTCTGTATCGGCTTTATTGTGCTTCTGGTGCa                     <  2:610259/36‑1 (MQ=255)
                gCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCaaa                   <  1:1607938/36‑1 (MQ=255)
                gCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCaaa                   <  2:2520275/36‑1 (MQ=255)
                gCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCaaa                   <  1:2454441/36‑1 (MQ=255)
                gCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCaaa                   <  1:3416557/36‑1 (MQ=255)
                 cGTCTGTATCGGCTTTTTTTTGCTTCTGGTGTAAAg                  >  1:2031881/1‑36 (MQ=21)
                 cGTCTGTATCGGCTTTTTTTTGCTTCTGGTGCCAAg                  >  2:1187694/1‑36 (MQ=21)
                 cGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAg                  <  2:1955793/36‑1 (MQ=255)
                 cGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAg                  <  1:2509114/36‑1 (MQ=255)
                 cGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAg                  <  1:1991377/36‑1 (MQ=255)
                 cGTCTGTATCGGCTTTATTGTGCTTCCGGTGCAAAg                  >  1:1705087/1‑36 (MQ=255)
                  gTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGc                 <  1:1050565/36‑1 (MQ=255)
                   tCTGTATCGGCTTTATTGTGCTTTTTGTGTAAAGCg                >  2:770255/1‑36 (MQ=25)
                    cTGTATCGGCTTTTTTTTTCTTTTTGTTCAAAACGt               >  1:1600795/1‑36 (MQ=0)
                     tGTATCGGCTTTTTTTTGCTTCTGGTGCAAAGGGtt              >  1:2739022/1‑36 (MQ=21)
                     tGTATCGGCTTTTTTGTGGCTTTGGTTCAAAACGtt              >  1:3387906/1‑36 (MQ=9)
                      gTATCGGCTTTATTGTGCTTTTGGTGCAAAGCGTTg             >  2:1127501/1‑36 (MQ=255)
                      gTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTg             <  2:416589/36‑1 (MQ=255)
                       tATCGGCTTTATTTTGCTTCTGGTGCAAAGCGCTGa            >  2:1862065/1‑36 (MQ=25)
                       tATCGGCTTTATTGTGCTTCTGGTGCAACGCGCTGa            >  2:856248/1‑36 (MQ=37)
                       tATCGGCTTTATTGTGCTTCTGGTGCAAAGCGttta            >  1:2103974/1‑34 (MQ=255)
                       tATCGGCTTTATTGTGCTTCCGGTGCAAAACGTTGa            >  2:3228218/1‑36 (MQ=37)
                        aTCGGCTTTATTTTGCTTTTTGTGCAAAGTGTTGAg           >  2:1573289/1‑36 (MQ=16)
                        aTCGGCTTTATTGTGCTTCTTGTGCAAAGCGTTTAg           >  1:1896261/1‑36 (MQ=37)
                        aTCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAg           <  1:783526/36‑1 (MQ=255)
                         tCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAgg          >  2:1921764/1‑36 (MQ=255)
                         tCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAgg          <  2:2131412/36‑1 (MQ=255)
                         gctgCTTNATTGTGCTTCTGGTGCAAAGCGTTGAgg          <  1:613390/33‑1 (MQ=255)
                          cGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAggg         <  1:1012178/36‑1 (MQ=255)
                          cGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAggg         >  1:3301782/1‑36 (MQ=255)
                           gtcTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGc        <  1:1870379/34‑1 (MQ=255)
                           ggCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGc        >  1:1163649/1‑36 (MQ=255)
                           ggCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGc        >  2:2937250/1‑36 (MQ=255)
                           ggCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGc        >  1:3504965/1‑36 (MQ=255)
                           ggCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGc        >  2:2175504/1‑36 (MQ=255)
                           ggCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGc        >  2:1021261/1‑36 (MQ=255)
                           ggCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGc        <  2:1281883/36‑1 (MQ=255)
                            gCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCg       >  1:235648/1‑36 (MQ=255)
                            gCTTTATTGTGCTTCTGGTGAAAAGGGTTGAGGGCg       >  2:3290810/1‑36 (MQ=38)
                              tttATTGTGCTTCTGGTGCAAAGCGTTGAGGGCgta     >  1:663924/1‑34 (MQ=255)
                              tttATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGaa     <  1:2824136/36‑1 (MQ=255)
                              tttATTGTGCTTCTGGTGCAAAGCGTTGACAGCGaa     >  2:744813/1‑36 (MQ=37)
                               ttATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGaaa    <  1:552129/36‑1 (MQ=255)
                               ttATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGaaa    >  1:2475775/1‑36 (MQ=255)
                                tATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGaaaa   <  2:2051748/36‑1 (MQ=255)
                                tATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGaaaa   >  2:3092446/1‑36 (MQ=255)
                                tATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGaaaa   <  1:2599638/36‑1 (MQ=255)
                                 aTTGTGCTTCTGGTGCAAAGCGTTGAGGGCGtaatt  >  1:967124/1‑34 (MQ=37)
                                 aTTGTGCTTCTGGTGCAAAGCGTTGAGGGCGaaaaa  >  2:2162270/1‑36 (MQ=255)
                                 aTTGTGCTTCTGGTGCAAAGCGTTGAGGGCGaaaaa  <  1:3171581/36‑1 (MQ=255)
                                 |                                   
CCAATGATCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAA  >  REL606/2433421‑2433489

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 13 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG