Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6064,462,9920G→T33.0% 133.5209230yjgNconserved inner membrane protein
Reads supporting (aligned to +/- strand):  new base (0/65):  ref base (30/102):  total (30/179)

Only 100 of 211 total aligned reads displayed.

TCTTATGGAATTACTGGTGGGAATGTTT.TTTTTA.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCTATTTCGCAATAT  >  REL606/4462958‑4463027
                                    |                                         
    aTGGAATTACTGGTGGGAATGTTT.TTTTTA.GTTG.T.c                                    >  2:2489817/1‑36 (MQ=255)
    aTGGAATTACTGGTGGGAATGTTT.TTTTTA.GTTG.T.c                                    >  2:1726017/1‑36 (MQ=255)
        aaTTACTGGTGGGAATGTTT.TTTTTA.GTTG.T.Ct.t.g.t                             <  1:3261198/36‑1 (MQ=255)
          ttACTGGCGGGAATGTTT.TTTTTA.GTTG.T.Ct.t.t.t.tt                          >  2:918333/1‑36 (MQ=37)
            aCTGGTGGGAATGTTT.TTTTTA.GTTG.T.Ct.t.g.t.tttt                        >  1:3229533/1‑36 (MQ=255)
            aCTGGTGGGAATGTTT.TTTTTA.GTTG.T.Ct.c.t.t.tttt                        >  1:1484458/1‑36 (MQ=37)
               ggtggGAATGTTT.TTGTTA.GTTG.T.Ct.t.g.t.ttttgtt                     <  2:2616903/36‑1 (MQ=255)
                 tggGAATGTTT.TTTTTA.GTTG.T.Ct.t.g.t.ttttgttta                   >  1:533572/1‑35 (MQ=255)
                 tggGAATGTTT.TTTTTA.GTTG.T.Ct.t.g.t.ttttgttct                   <  2:1928305/36‑3 (MQ=255)
                 tggGAATGTTT.TTTTTA.GTTG.T.CT.t.g.t.ttttgtttt                   >  2:47085/1‑36 (MQ=255)
                   cttaTGTTT.TTTTTT.GTTT.T.TT.T.T.T.TTTTTtttttt                 <  2:3470249/33‑1 (MQ=2)
                   atgaTGTTT.TTTTT..TTTT.T.CT.T.T.T.TTTTTttttttt                <  2:3488424/33‑1 (MQ=0)
                    ttaTGTTT.TTTTT..TTTC.T.CT.T.T.T.TTTTTtttttttt               <  1:3103366/34‑2 (MQ=0)
                    tgttGTTT.TTTTTT.GTTT.T.TTGT.G.T.TTTTTtttttt                 <  2:3028801/33‑1 (MQ=2)
                    tggtGTTT.TTTTTT.CTTT.T.TT.T.T.T.TTTTTttttttt                <  1:3713311/33‑1 (MQ=2)
                    tcttGTTT.TTTTCT.GTTT.T.TT.T.T.T.TTTTTttttttt                <  2:2850979/33‑1 (MQ=2)
                    gtgtGTTT.TTTTTC.GTTC.T.CT.T.G.T.GTTATtttcttt                <  2:3617383/33‑1 (MQ=2)
                    ggctGTTT.TTTTTT.TTTA.T.TT.T.T.T.TTTTTttttttt                <  2:3356439/33‑1 (MQ=9)
                     tttGTTT.TTTTTT.TTTG.TGTT.T.G.T.TTTTTgtttttt                <  2:3185346/34‑1 (MQ=2)
                     tttGTTT.TTTTTT.GTGT.T.TT.T.T.T.TTTTGtttttttt               <  1:3651341/34‑2 (MQ=2)
                     tttGTTT.TTTTTG.GGTT.T.TA.T.G.T.TTTTTtttttttt               <  2:3185310/34‑2 (MQ=0)
                     tttGTTT.TTTTTC.TTTG.T.TT.T.T.T.TTTTCtttttttt               <  1:2819985/34‑2 (MQ=9)
                     tttGTTT.TTTTTA.TTTG.T.GT.T.G.T.TTTTTtttttttt               <  2:3662313/34‑2 (MQ=19)
                     tttGTTT.TTGTTT.TTTT.T.GT.T.G.T.TTTTTtttttttt               <  2:3404819/34‑2 (MQ=12)
                     tttGTGT.TTTTTT.TTTG.T.TT.T.G.T.TTTTTtttttttt               <  2:3107948/34‑2 (MQ=2)
                     tgtGTTT.TTTTTT.TTTT.T.TT.T.C.T.TTTTCtttttttt               <  2:2940633/34‑2 (MQ=2)
                     tctGTTT.TTTCTT.TTTT.T.TT.T.T.T.TTTTGTTTTTTTc               <  1:2720065/34‑1 (MQ=0)
                     taTGTTT.TTTTTT.GTCT.T.TT.T.T.T.ATTTTtttttttt               <  1:3151048/35‑2 (MQ=0)
                     taTGTTT.TTTTTT.CTT..T.CT.T.T.T.TTTTTttttttttt              <  1:2859545/35‑3 (MQ=0)
                     gttGTTT.TTGTTT.TTTT.T.TT.T.G.T.TTTTTtttttttt               <  2:2844562/34‑2 (MQ=2)
                     gttGTTT.GTTTTT.TTTG.T.TT.T.T.T.TTTTTtttttttt               <  2:3164436/34‑2 (MQ=0)
                     ggtGTTT.TTTTTG.TTTG.T.TT.T.T.T.TTTTTtttttttt               <  2:3644802/34‑2 (MQ=2)
                     cttGTTT.TTTTTT.GTTT.T.TT.T.C.T.TTTTTtttttttt               <  2:3000471/34‑2 (MQ=2)
                     cgtGTCT.TTTTTT.GTTT.T.TT.T.G.T.TTTTTtttttttt               <  2:2771148/34‑2 (MQ=0)
                     aaTGTTT.TTTTTA.GTTG.T.CT.T.G.T.TTTTGtttttttt               >  1:2248449/1‑35 (MQ=255)
                      tttttt.tttttT.TTTG.T.CT.T.C.T.TTTTTTTTTTTTCt              <  1:3035830/33‑1 (MQ=12)
                      ttGTTT.TTTTTT.TTTT.T.CTCT.C.T.TTTTCtttttttt               <  1:3451909/35‑2 (MQ=2)
                      ttGTTT.TTTTTT.GTTT.G.TT.T.T.T.TTTTTtttttttgt              <  2:3525672/35‑3 (MQ=0)
                      ttGTTT.TGTTTT.TTTT.T.AT.T.T.T.TTTTGttttttttt              <  2:3525280/35‑3 (MQ=0)
                      gtGTTT.TGTTTA.TTTG.T.TT.TCT.T.TTTTGtttttttt               <  2:3626551/35‑2 (MQ=2)
                      gtGTTT.TCTTTT.GTTT.T.TT.T.GTT.TTTTGtttttttt               <  2:3117653/35‑2 (MQ=0)
                      aTGTTTCTTTTTT.TTTG.A.TT.T.G.T.TTTTTtttttttt               <  2:2730392/36‑2 (MQ=9)
                      aTGTTT.TTTTTT.TTTG.T.TG.T.T.T.TTTTGttttttttt              <  2:3261942/36‑3 (MQ=9)
                      aTGTTT.TTTTTA.GTTG.T.CT.T.G.T.TTTTGttttttttt              >  1:373022/1‑34 (MQ=255)
                      aTGTTT.TTTTTA.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCt              <  1:2552385/36‑1 (MQ=255)
                      aTGTTT.TTTTTA.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCt              <  2:3421301/36‑1 (MQ=255)
                      aTGTTT.TTTTTA.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCt              >  1:1883715/1‑36 (MQ=255)
                       tGTTT.TTTTTT.TTTT.T.AT.T.G.T.TTTTTtgtttttttt             <  2:3214563/36‑4 (MQ=0)
                       tGTTT.TTTTTT.GTT..T.TT.T.G.T.TTTTTTTTTTTTCttt            <  2:3048620/36‑3 (MQ=0)
                       tGTTT.TTTTTG.TCTT.T.CT.T.T.T.TTTTTtttttttttt             <  2:3096926/36‑4 (MQ=2)
                       tGTTT.TTTTTG.GTTT.T.GT.T.T.T.TTTTTtttttttttt             <  2:3500240/36‑4 (MQ=0)
                       tGTTT.TTTTAT.TTTT.T.TT.T.GTT.TTTTGttttttttt              <  2:3562420/36‑3 (MQ=0)
                       tGTTT.TTGTCT.GTTG.T.CT.T.T.T.TTTTTcttttttttt             <  2:3496340/36‑4 (MQ=2)
                       tGTTT.GTTTTT.GGTG.T.TT.T.T.A.TTTTGtttttttttt             <  2:2870307/36‑4 (MQ=0)
                       tGTTG.TTTTTT.TTTT.T.TT.T.G.T.TTTTGtttttttttt             <  2:2746914/36‑4 (MQ=0)
                        tttt.ttttgT.GTTGTT.GT.T.T.T.TTTTGTTTTTTTCtt             <  2:3580975/35‑2 (MQ=2)
                        tttt.tttctT.TTTG.T.TT.T.GTT.TTTTGTTTTTTTCtt             <  2:3290979/35‑2 (MQ=12)
                         ttt.tttttT.GTTG...CT.T.T.T.TGTTTTTTTTTCCTGttt          <  1:3497517/36‑1 (MQ=2)
                         ttt.tttttA..TGA.T.CT.T.G.T.TTGTTTTTTTTTTTTttt          <  2:3590181/36‑1 (MQ=0)
                         ttt.gttttA.GTT..T.GT.T.G.T.TTTTTTTTTTTTTTTttt          <  2:3705812/36‑1 (MQ=2)
                         tgt.tttttT.TTTG.T..T.T.C.T.TTTTTTTTTTTTCTTttt          <  2:2950219/34‑1 (MQ=2)
                         ctt.tttttT.TTTG.T..T.T.A.T.TTTTGTTTTTTTTTTttt          <  2:2738074/35‑1 (MQ=0)
                          tt.tttttT.TTTG...CT.T.T.T.TTTTTTTTTTTTCTAtttt         <  2:3233796/36‑2 (MQ=2)
                          tt.tttttT.GTTT.T.GT.T.T.G.TTTTGTTTTTTTTTTttt          <  2:3268381/36‑1 (MQ=0)
                          tt.tttttG.TTTA.T.TT.T.G.T.TTTTGTTTTTTTTTTttt          <  2:2730322/36‑1 (MQ=9)
                          tt.tatttG.GTTT.T.TT.T.G.T.TTTTTTTTTTTTTTTttt          <  1:3479249/36‑1 (MQ=2)
                          gt.tttttT.GTGC.T.TT.T.G.T.TTTTTTTTTTTTTTTttt          <  2:2709220/35‑1 (MQ=12)
                          ct.tttttT.TTTT.T.TT.T.G.T.TTTTTTTTTGTTCTTttt          <  2:3375967/35‑1 (MQ=2)
                           ttgttttT.GTTC.T.TT.T.T.T.TTTTGTTTTTTTTTTttt          <  1:3368036/33‑1 (MQ=0)
                           tgtttttT.GTTT.T.TT.T.G.T.TTTTTATTTTTTTTTttt          <  2:3576177/34‑1 (MQ=0)
                           tgtttttT.GTTG.T.TT.T.T.T.TTTTGTTTTTTTTTTttt          <  1:3570334/34‑1 (MQ=2)
                           t.tttttT.TTTC.T.GT.T.C.T.TTTTGTTTTTTTTTCtttt         <  2:3156278/36‑2 (MQ=2)
                           t.tttttT.GTCT.T.TT.T.G.T.TGTTTTTTTTTTTTAtttt         <  2:3442224/36‑2 (MQ=2)
                           t.tttttT.CTTG.T.CT.T...T.TTTTGTTTTTTTTTTttttt        <  2:3059264/36‑3 (MQ=0)
                           t.tttttA.TTTT.T.AT.T.G.TGTTTTTTTTTTTTCTCttt          <  2:3376025/36‑1 (MQ=2)
                           t.tttttA.GTGC.T.TT.T.G.T.TTTTATTTATTTATTtttt         <  2:2821279/36‑2 (MQ=0)
                           t.ttttcT.GTTT.T.TT.T.G.T.TTTTTTTTCTTTTTAttgt         <  2:3029695/36‑3 (MQ=0)
                           t.ttttcT.GTTG.T.TT.T.G.T.TTTTTTGTTTTTTTTtttt         <  2:2841173/36‑2 (MQ=2)
                           t.ttttcT.GTAG.T.TT.T.G.T.TTTTTTTTTTTTTTTtttt         <  2:3544286/36‑2 (MQ=0)
                           t.ttgttT.GTTT.T.CT.T.G.T.GTTTGTTTTTTTTTTtttt         <  2:3743520/36‑2 (MQ=2)
                            gtttttT.GTTT.T.GT.T.G.T.TTTTTTTTTTTTTTTtttt         <  2:3239265/35‑2 (MQ=2)
                            gtttttT.GTT..T.CG.T.G.T.TTTTTTTTTTTTTTTttttt        <  2:3580865/35‑3 (MQ=2)
                            gtttttC.GTTT.T.TT.T.T.T.TTTTGTTTTTTTTTTtttt         <  2:2781206/35‑2 (MQ=2)
                             tttttT.TTTG.T.TT.T.G.T.TTGTTTTTTTTTCTTttttt        <  2:3717108/36‑3 (MQ=0)
                             tttttT.GTTT.T.CT.T...T.TTTGTTTTTTTTTTAtttttt       <  2:3635151/36‑4 (MQ=12)
                             tttttT.GTTG.T.TT.G.T.T.TTTTGTGTTTTTGTTttttt        <  2:2960704/36‑3 (MQ=2)
                             tttttG.CTTG.T.TT.T.T.T.TGTTGTTTTTTTCTTttgtg        <  2:3328790/36‑4 (MQ=0)
                             tttttA.TTTG.T.TG.T.T.T.TTTTGTTTTTTTTTTttttt        <  2:3300394/36‑3 (MQ=2)
                             tttttA.GTTG.T.TC.T.T.T.TTTTGTCTTTTGTTAttttt        <  2:3137025/36‑3 (MQ=0)
                             tttttA.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCTATTTct        >  1:2475464/1‑35 (MQ=255)
                             tttttA.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCTATTTct        >  2:3310157/1‑35 (MQ=255)
                              ttttT.GTTG.T.CT.G.T.T.TTTTTTTTTTTTTTTtttttt       <  2:2911147/36‑4 (MQ=0)
                              ttttAGGTTG.T.TT.T.T.C.TTTTGTTTTTTTTTTttttt        <  2:2945409/36‑3 (MQ=2)
                               tttA.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCTATTTCGCa      <  2:1285665/36‑1 (MQ=255)
                               tttA.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCTATTTCGCa      <  1:974633/36‑1 (MQ=255)
                                ttA.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCTATTTCTCaa     >  2:3645837/1‑36 (MQ=255)
                                 tA.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCTATTTCGCAat    <  2:360651/36‑1 (MQ=255)
                                  a.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCTATTTCTCAata   >  2:3439238/1‑36 (MQ=255)
                                  a.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCTATTTCGCAata   <  2:162197/36‑1 (MQ=255)
                                    gTTG.T.CT.T.G.T.TTTTGTTTTTTTCTATTTCGCAatat  <  2:800935/36‑1 (MQ=255)
                                    |                                         
TCTTATGGAATTACTGGTGGGAATGTTT.TTTTTA.GTTG.T.CT.T.G.T.TTTTGTTTTTTTCTATTTCGCAATAT  >  REL606/4462958‑4463027

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 10 ≤  ATCG  < 22 ≤  ATCG  < 32 ≤  ATCG