New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1 =0 (0.000)34 (0.620) 25/70 0.9 100% intergenic (–/‑189) –/thrL –/thr operon leader peptide
?REL606 = 4629812 0 (0.000)intergenic (+24/–) lasT/– predicted rRNA methyltransferase/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCTTTTCATTCTGACTGCAACGGGCAATATG  >  REL606/1‑32
                                  |                               
caccaaataaaaaacgccttagtaagtatttttcAg                                >  2:1544635‑M1/35‑36 (MQ=255)
caccaaataaaaaacgccttagtaagtatttttcAg                                <  2:2073268‑M1/2‑1 (MQ=255)
 accaaataaaaaacgccttagtaagtatttttcAGc                               <  2:1671513‑M1/3‑1 (MQ=255)
 accaaataaaaaacgccttagtaagtatttttcAGc                               <  1:3191182‑M1/3‑1 (MQ=255)
  ccaaataaaaaacgccttagtaagtatttttcAGCt                              <  2:1621152‑M1/4‑1 (MQ=255)
    aaataaaaaacgccttagtaagtatttttcAGCttt                            >  2:1618863‑M1/31‑36 (MQ=255)
     aataaaaaacgccttagtaagtatttttcAGCtttt                           <  2:129290‑M1/7‑1 (MQ=255)
        aaaaaacgccttagtaagtatttttcAGCTTTTCAt                        <  2:722731‑M1/10‑1 (MQ=255)
         aaaaacgccttagtaagtatttttcAGCTTTTCAtt                       >  2:2961565‑M1/26‑36 (MQ=255)
         aaaaacgccttagtaagtatttttcAGCTTTTCAtt                       >  1:2662764‑M1/26‑36 (MQ=255)
           aaacgccttagtaagtatttttcAGCTTTTCATTCt                     >  2:2571201‑M1/24‑36 (MQ=255)
           aaacgccttagtaagtatatttcAGCTTTTCATTCt                     <  1:2880076‑M1/13‑1 (MQ=255)
            aacgccttagtaagtatttttcAGCTTTTCATTCTg                    <  1:1865738‑M1/14‑1 (MQ=255)
             acgccttagtaagtatttttcAGCTTTTCATTCTGa                   <  2:2895664‑M1/15‑1 (MQ=255)
             acgccttagtaagtatttttcAGCTTTTCATTCTGa                   >  2:2478516‑M1/22‑36 (MQ=255)
              cgccttagtacgtatttttcAGCTTTTCATTCTGAc                  <  2:1992915‑M1/16‑1 (MQ=255)
              cgccttagtaagtatttttcATCTTTTCATTCTGAc                  >  1:2964769‑M1/21‑36 (MQ=255)
              cgccttagtaagtatttttcAGCTTTTCATTCTGAc                  >  2:3628370‑M1/21‑36 (MQ=255)
              cgccttagtaagtatttttcAGCTTTTCATTCTGAc                  <  1:3309877‑M1/16‑1 (MQ=255)
               gccttagtaagtatttttcAGCTTTTCATTCTGACt                 >  2:3143317‑M1/20‑36 (MQ=255)
                ccttagtaagtatttttcAGCTTTTCATTCTGACTg                >  2:787268‑M1/19‑36 (MQ=255)
                   tagtaagtatttttcAGCTTTTCATTCTGACTGcac             <  2:1904339‑M1/21‑2 (MQ=255)
                   tagtaagtatttttcAGCTTTTCATTCTGACTGCaa             >  2:3035712‑M1/16‑36 (MQ=255)
                   tagtaagtatttttcAGCTTTTCATTCTGACTGCaa             <  1:2153826‑M1/21‑1 (MQ=255)
                    agtaagtatttttcAGCTTTTCATTCTGACTGCAAc            >  1:2510014‑M1/15‑36 (MQ=255)
                       aagtatttttcAGCTTTTCATTCTGACTGCACCggg         <  1:845290‑M1/25‑1 (MQ=255)
                       aagtatttttcAGCTTTTCATTCTGACTGCAACggg         <  1:382037‑M1/25‑1 (MQ=255)
                        agtatttttcAGCTTTTCATTCTGACTGCAACGGGc        <  2:150453‑M1/26‑1 (MQ=255)
                        agtatttttcAGCTTTTCATTCTGACTGCAACGGGc        >  1:81870‑M1/11‑36 (MQ=255)
                             ttttcAGCTTTTCATTCTGACTGCAACGGGCAatat   >  1:2636912‑M1/6‑36 (MQ=255)
                             ttttcAGCTTTTCATTCTGACTGCAACGGGCAatat   >  2:614075‑M1/6‑36 (MQ=255)
                              tttcAGCTTTTCATTCTGACTGCAACGGGCAATATg  >  1:2725153‑M1/5‑36 (MQ=255)
                              tttcAGCTTTTCATTCTGACTGCAACGGGCAATATg  >  1:204874‑M1/5‑36 (MQ=255)
                              tttcAGCTTTTCATTCTGACTGCAACGGGCAATATg  >  1:1131495‑M1/5‑36 (MQ=255)
                                  |                               
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCTTTTCATTCTGACTGCAACGGGCAATATG  >  REL606/1‑32

Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 18 ≤  ATCG  < 30 ≤  ATCG  < 32 ≤  ATCG