Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL606157,9940G→T25.7% 10.335277htrEpredicted outer membrane usher protein
Reads supporting (aligned to +/- strand):  new base (9/0):  ref base (6/20):  total (15/20)

AACTGCAATAAATTCTTAAGTGTGATACAGGCTTGTGCG.TTTTTTTTTCCTTCAATTTCAATAAATGTAA  >  REL606/157960‑158029
                                  |                                    
aaCTGCAATAAATTCTTAAGTGTGATACAGGCTtgt                                     <  2:2002091/36‑1 (MQ=255)
  cTGCAATAAATTCTTAAGTGTGATACAGGCTTGTGc                                   <  2:2205805/36‑1 (MQ=255)
  cTGCAATAAATTCTTAAGTGTGATACAGGCTTGTGc                                   <  2:3467958/36‑1 (MQ=255)
  cTGCAATAAATTCTTAAGTGTGATACAGGCTTGTGc                                   <  2:137213/36‑1 (MQ=255)
    gCAATAAATTCTTAAGTGTGATACAGGCTTGTGCG.t                                <  2:614632/36‑1 (MQ=255)
     cAATAAATTCTTAAGTGTGATACAGGCTTTTGCG.tt                               >  1:2534833/1‑36 (MQ=255)
     cAATAAATTCTTAAGTGTGATACAGGCTTGTGCG.tt                               <  2:2433126/36‑1 (MQ=255)
      aaTAAATTCTTAAGTGTGATACAGGCTTTTGTG.ttt                              >  2:1354054/1‑36 (MQ=38)
        ttaaTTCTTTAGTGTGATACAGGCTTGTGCG.ttttt                            <  1:2126541/34‑1 (MQ=38)
        tAAATTCTTAAGTGTGATACAGGCTTTTTTG.ttttt                            >  2:2992173/1‑36 (MQ=25)
         ataTTCTTAAGTGTGATACAGGCTTGTGCG.tttttt                           <  1:331682/34‑1 (MQ=255)
         aaaTTCTTAAGTGTGATACAGGCTTGTGCG.tttttt                           <  2:788049/36‑1 (MQ=255)
         aaaGTCGTAAGTGTGATACAGGCTTGTGCG.tttttt                           <  2:633142/36‑1 (MQ=38)
           aTTCTTAAGTGTGATACAGGCTTTTTTG.tttttttt                         >  2:795801/1‑36 (MQ=25)
           aTTCTTAAGTGTGATACAGGCTTTTTCG.tttttttt                         >  1:3313809/1‑36 (MQ=37)
           aTTCTTAAGTGTGATACAGGCTTGTGCG.tttttttt                         <  2:870697/36‑1 (MQ=255)
            ttCTTAAGTGTGATACAGGCTTTTTGG.ttttttttt                        >  2:3419783/1‑36 (MQ=21)
             tCTTAAGTGTGATACAGGCTTTTTTG.tttttttttt                       >  2:1456546/1‑35 (MQ=25)
               ttAAGTGTGCTACAGGCTCTTGTG.TTTTTTCTTTCt                     >  2:2959899/1‑36 (MQ=2)
               ttAAGTGTGATACAGGCTTTTTCG.tttttttttttt                     >  2:1108451/1‑33 (MQ=37)
                   gtgtGATACAGGCTTGTGCG.TTTTTTTTTCTtttta                 >  1:2219870/1‑33 (MQ=25)
                   gtgtGATACAGGCTTGTGCG.TTTTTTTTTCCttcaa                 <  2:3192411/36‑1 (MQ=255)
                   gggtgATACAGGCTTGTGCG.TTTTTTTTTCCttcaa                 <  2:1853030/34‑1 (MQ=255)
                     gtgATACAGGCTTGTGCG.TTTTTTTTTCCttcaatt               <  2:573347/36‑1 (MQ=255)
                         tACAGGCTTGTGCG.TTTTTTTTTCCttcaatttcaa           <  2:1966986/36‑1 (MQ=255)
                          aCAGTCTTGTGCG.TTTTTTTTTCCttcaatttcaat          <  1:2437952/36‑1 (MQ=255)
                           cAGGCTTGTGCG.TTTTTTTTTCCTTCAATTTCAATa         <  2:73456/36‑1 (MQ=255)
                           cAGCCTTGTGCG.TTTTTTTTTCCTTCAATTTCAATa         <  1:3682257/36‑1 (MQ=255)
                            aGGCTTGTGCGTTTTTTTTTTCCTTTAATTTTAATa         >  1:942830/1‑36 (MQ=16)
                            aGGCTTGTGCG.TTTTTTTTTCCTTCAATTTCAATaa        <  1:3516168/36‑1 (MQ=255)
                            aGGCTTGTGCG.TTTTTTTTTCCTTCAATTTCAATaa        >  1:3233936/1‑36 (MQ=255)
                             ttcTTGTGCG.TTTTTTTTTCCTTCAATTTCAATaaa       <  1:365278/34‑1 (MQ=255)
                             ggCTTGTGCG.TTTTTTTTTCCTTCAATTTCAATaaa       <  1:106915/36‑1 (MQ=255)
                             ggCTTGTGCG.TTTTTTTTTCCTTCAATTCCAATaaa       >  2:2813823/1‑36 (MQ=255)
                                ttGTGCG.TTTTTTTTTCCTTCAATTTCAATAAATGt    >  2:864639/1‑36 (MQ=255)
                                ttGTGCG.TTTTTTTTTCCTTCAATTTCAATAAATGt    >  2:867488/1‑36 (MQ=255)
                                 tgtgCG.TTTTTTTTTCCTTCAATTTCAATAAATGTa   >  2:256974/1‑36 (MQ=255)
                                 tgtgCG.TTTTTTTTTCCTTCAATTTCAATAAATGTa   >  1:1459499/1‑36 (MQ=255)
                                  gtgCG.TTTTTTTTTCCTTCAATTTCAATAAATGTaa  >  1:3008650/1‑36 (MQ=255)
                                  |                                    
AACTGCAATAAATTCTTAAGTGTGATACAGGCTTGTGCG.TTTTTTTTTCCTTCAATTTCAATAAATGTAA  >  REL606/157960‑158029

Base quality scores:  ATCG  < 3 ≤  ATCG  < 9 ≤  ATCG  < 18 ≤  ATCG  < 30 ≤  ATCG  < 32 ≤  ATCG