Predicted mutation
evidence seq id position mutation annotation gene description
RA REL606 683,496 A→C V65G (GTT→GGT)  nagC ← DNA‑binding transcriptional dual regulator, repressor of N‑acetylglucosamine

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL606683,4960A→C100.0% 201.6 61194nagCDNA‑binding transcriptional dual regulator, repressor of N‑acetylglucosamine
Reads supporting (aligned to +/- strand):  new base (25/36):  ref base (0/0):  total (25/36)

GCGCGGCGGCCCCCAGTGGAGGCCTGCTGATCAACCTCTTTGATCAGCCCGCGTTCGATAAGCTGA  >  REL606/683463‑683528
                                 |                                
gcgcGGCGGCCCCCAGTGGAGGCCTGCTGATCACcc                                <  1:14596/36‑1 (MQ=255)
 cgcgGCGGCCCCCAGTGGAGGCCTGCTGATCACCct                               <  2:2988193/36‑1 (MQ=255)
 cgcgGCGGCCCCCAGTGGAGGCCTGCTGATCACCct                               <  2:1559533/36‑1 (MQ=255)
 cgcgGCGGCCCCCAGTGGAGGCCTGCTGATCACCct                               <  1:3601440/36‑1 (MQ=255)
 cgcgGCGGCCCCCAGTGGAGGCCTGCTGATCACCct                               <  1:3166465/36‑1 (MQ=255)
  gcggcgGCCCCCCGTGGAGGGCTGCTGATCACCctc                              >  1:651462/1‑36 (MQ=25)
  gcggcgGCCCCCAGTGGAGGCCTGCTGATCACCctc                              <  2:1738654/36‑1 (MQ=255)
  gcggccGCCCCCAGTGGAGGCCTGCTGATCACCctc                              <  2:907789/36‑1 (MQ=37)
   cggcggCCCCCAGTGGAGGCCTGCTGATCACCctct                             <  2:2003308/36‑1 (MQ=255)
   cggcggCCCCCAGTGGAGGCCTGCTGATCACCctct                             >  2:1936964/1‑36 (MQ=255)
    ggcggcCCCCAGTGGAGGCCTGCTGATCACCCTCtt                            <  1:2292446/36‑1 (MQ=255)
      cggcCCCCAGTGGAGGCCTGCTGATCACCCTCTTTg                          >  2:2905585/1‑36 (MQ=255)
      ccgcCCCCAGTGGAGGCCTGCTGATCACCCTCTTTg                          <  2:2916566/34‑1 (MQ=37)
       ggcCCCCAGTGGAGGCCTGCTGATCACCCTCTTTGa                         <  2:1901499/36‑1 (MQ=255)
       ggcCCCCAGTGGAGGCCTGCTGATCACCCTCTTTGa                         <  2:2841741/36‑1 (MQ=255)
       ggcCCCCAGTGGAGGCCTGCTGAGCACCCTCTTTGa                         <  2:2137231/36‑1 (MQ=38)
         cccccAGTGGAGGCCTGCTGATCACCCTCTTTGATc                       <  2:3119805/36‑1 (MQ=255)
         cccccAGTGGAGGCCTGCTGATCACCCTCTTTGATc                       <  1:3163302/36‑1 (MQ=255)
          ccccGGTGGAGGCCTGCTGATCACCCTCTTTGATCa                      <  2:849365/36‑1 (MQ=37)
          ccccAGTGGAGGCCTGCTGATCACCCTCTTTGATCa                      <  2:2408362/36‑1 (MQ=255)
          ccccAGTGGAGGCCTGCTGATCACCCTCTTTGATCa                      <  1:1690733/36‑1 (MQ=255)
           cccAGTGGAGGCCTGCTGATCACCCTCTTTGATCAg                     >  1:322723/1‑36 (MQ=255)
           cccAGGGGAGGCCTGCTGATCACCCTCTGGGATCAg                     <  2:1055863/36‑1 (MQ=16)
             cggTGGAGGCCTGCTGATCACCCTCTTTGATCAGcc                   <  1:2410003/34‑1 (MQ=37)
             cAGTGGAGGCCTGCTGATCACCCTCTTTGATCAGcc                   >  1:2160074/1‑36 (MQ=255)
             cAGTGGAGGCCTGCTGATCACCCTCTTTGATCAGcc                   >  1:2333921/1‑36 (MQ=255)
             cAGGGGAGGCCTGCTGATCACCCTCTTTGATCAGcc                   <  2:1131558/36‑1 (MQ=37)
              aGTGGAGGCCTGCTGATCACCCTCTTTGATCAGccc                  <  2:2509038/36‑1 (MQ=255)
              aGTGGAGGCCTGCTGATCACCCTCTTTGATCAGccc                  >  1:1814721/1‑36 (MQ=255)
              aGTGGAGGCCTGCTCATCACCCTCTTTTATCAAccc                  >  1:2412454/1‑36 (MQ=16)
               gTGGAGGCCTGCTGATCACCCTCTTTGATCAGCCcg                 <  1:1754453/36‑1 (MQ=255)
               gTGGAGGACTGCTGATCACCCTCTTTGATCAGCCcg                 >  1:208724/1‑36 (MQ=37)
                tGGAGGCCTGCTGATCACCCTCTTTGATCAGCCcgc                >  1:3505569/1‑36 (MQ=255)
                 ggAGGCCTGCTGATCACCCTCTTTGATCAGCCcgcg               >  2:1005959/1‑36 (MQ=255)
                  gAGGCCTGCTGATCACCCTCTTTGAGCAGCCCGCGt              <  2:1858224/36‑1 (MQ=37)
                   agcccTGCTGATCACCCTCTTTGATCAGCCCGCGtt             <  2:3467549/33‑1 (MQ=37)
                   aGGGCTGCTGATCACCCTCTTTGATCAGCCCGCGtt             <  2:1981008/36‑1 (MQ=37)
                     gCCTGCTGATCACCCTCTTTGATCAGCCCGCGTTCg           <  2:2744287/36‑1 (MQ=255)
                     gCCTGCTGATCACCCTCTTTGATCAGCCCGCGTTCg           <  1:3319300/36‑1 (MQ=255)
                       ctgctgGTCACCGTCTGTGATCAGCCCGCGTTCGAt         <  1:95532/36‑1 (MQ=19)
                       ctgctgATCACCCTCTTTGATCAGCCCGCGTTCGAt         <  2:1244439/36‑1 (MQ=255)
                       ctgctgATCACCCTCTTTGATCAGCCCGCGTTCGAt         >  2:1997320/1‑36 (MQ=255)
                       ctgctgATCACCCTCTTTGATCAGCCCGCGTTCGAt         <  1:2049290/36‑1 (MQ=255)
                        tgctgGTCACCCTCTTTGATCAGCCCGCGTTCGATa        <  2:1897029/36‑1 (MQ=37)
                        tgctgATCACCCTCTTTGATCAGCCCGCGTTCGATa        >  1:2964142/1‑36 (MQ=255)
                        tgctgATCACCCTCTTTGATCAGCCCGCGTTCGATa        >  2:2057962/1‑36 (MQ=255)
                        tgctgATCACCCTCTTTGATCAGCCCGCGTTCGATa        >  2:2416127/1‑36 (MQ=255)
                        tgctgATCACCCTCTTTGATCAGCCCGCGTTCGATa        >  1:989125/1‑36 (MQ=255)
                          ctgATCACCCTCTTTAATCAGCCCGCGTTCGATAAg      >  1:1616952/1‑36 (MQ=37)
                           tgATCACCCTCTTTGATCGGCCCGCGTTCGATAAGc     <  1:1096693/36‑1 (MQ=37)
                           tgATCACCCTCTTTGATCAGCCCGCGTTCGATAAGc     >  2:2070231/1‑36 (MQ=255)
                            gATCACGCTCTTTGATCAGCCCGCGTTCGATAAGCt    <  1:622419/36‑1 (MQ=37)
                            gATCACCCTCTTTGATCAGCCCGCGTTTGATAAGCt    >  1:3141840/1‑36 (MQ=37)
                            gATCACCCTCTTTGATCAGCCCGCGTTCGATATGCt    >  2:344707/1‑36 (MQ=37)
                            gATCACCCTCTTTGATCAGCCCGCGTTCGATAAGCt    >  2:1641827/1‑36 (MQ=255)
                            gATCACCCTCTTTGATCAGCCCGCGTTCGATAAGCt    >  1:476776/1‑36 (MQ=255)
                            gATCACCCTCTTTGATCAGCCCGCGTTCGAAAAGCt    >  2:2776606/1‑36 (MQ=37)
                             aTCACCCTCTTTGATCAGCCCGCGTTCGATAAGCTg   <  2:2050348/36‑1 (MQ=255)
                             aTCACCCTCTTTGATCAGCCCGCGTTCGATAAGCTg   <  2:320655/36‑1 (MQ=255)
                             aTCACCCTCTTTGATCAGCCCGCGTTCGATAAGCTg   >  2:2151041/1‑36 (MQ=255)
                              tCACCCTCTTTGATCAGCCCGCGTTCGTTAAGCTGa  >  2:3213529/1‑36 (MQ=37)
                                 |                                
GCGCGGCGGCCCCCAGTGGAGGCCTGCTGATCAACCTCTTTGATCAGCCCGCGTTCGATAAGCTGA  >  REL606/683463‑683528

Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 16 ≤  ATCG  < 27 ≤  ATCG  < 32 ≤  ATCG