Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 1,821,525 IS150 (–) +3 bp coding (573‑575/1041 nt) ynjI ← predicted inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1821525 =1 (0.060)59 (1.140) 39/66 0.1 98.3% coding (575/1041 nt) ynjI predicted inner membrane protein
?REL606 = 2775877 NA (NA)noncoding (1/1443 nt) IS150 repeat region
* ? REL606 = 18215270 (0.110)57 (1.070) 27/68 0.6 100% coding (573/1041 nt) ynjI predicted inner membrane protein
?REL606 2774435 = NA (NA)noncoding (1443/1443 nt) IS150 repeat region

TTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACAC  >  REL606/2774400‑2774468
                                   |                                 
ttCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGtt                                   <  1:2470290/36‑1 (MQ=255)
 tCGTATTGTTTGGGTTCGAACGTAAGCCTCAGGTTg                                  <  2:860297/36‑1 (MQ=255)
   gAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTa                                <  2:210461/36‑1 (MQ=255)
   gAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTa                                <  1:1308272/36‑1 (MQ=255)
   gAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTa                                >  2:3025092/1‑36 (MQ=255)
     aTTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACt                              >  2:636788/1‑36 (MQ=255)
     aTTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACt                              >  2:820090/1‑36 (MQ=255)
     aTTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACt                              >  1:1649042/1‑36 (MQ=255)
     aTTGTTTGGGTTCGAAAGTAAGCCTCAGGTTGTACt                              >  2:610854/1‑36 (MQ=255)
      ttGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACtc                             >  2:372372/1‑35 (MQ=255)
      ttGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTg                             <  2:1568986/36‑1 (MQ=255)
        gTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGAc                           <  2:2462889/36‑1 (MQ=255)
         tttGGGTTCGAACGTAAGCCTCAGGTTGTACTGAcc                          >  1:1773334/1‑36 (MQ=255)
         tttGGGTTCGAACGTAAGCCTCAGGTTGTACTGAcc                          <  1:324600/36‑1 (MQ=255)
         tttGGGTTCGAACGTAAGCCTCAGGTCGTACCGAcc                          >  1:1852927/1‑36 (MQ=38)
          ttGGGTTCGAACGTAAGCCTCAGGTTGTACTGAccc                         <  1:1443024/36‑1 (MQ=255)
           tGGGTTCGAACGTAAGCCTTAGGTTGTACTGActcc                        <  1:2935815/36‑1 (MQ=37)
            gggTTCGAACGTAAGCGTCAGGTTGTACTGACCCCa                       <  1:1453775/36‑1 (MQ=255)
            gggTTCGAACGTAAGCCTCAGGTTGTACTGACCCCa                       <  2:805314/36‑1 (MQ=255)
            gggTTCGAACGTAAGCCTCAGGTTGTACTGACCCCa                       <  2:2164794/36‑1 (MQ=255)
             ggTTCGAACGTAAGCCTCAGGTTGTACTGACCCCaa                      <  2:870892/36‑1 (MQ=255)
              gTTCGAACGTAAGCCTCAGGTTGTACTGACCCCaaa                     <  2:478185/36‑1 (MQ=255)
              gTTCAAACGTAAGCCTCAGGCTGTACTGACCCCaaa                     >  2:1086874/1‑36 (MQ=21)
               ttCGAACGTAAGCCTCAGGTTGTACTGACCCCaaaa                    <  1:2060825/36‑1 (MQ=255)
                tCGAACGTAAGCCTCAGGTTGTACTGACCCCaaaaa                   >  2:2663335/1‑36 (MQ=255)
                tCGAACGTAAGCCTCAGGTTGTACTGACCCCaaaaa                   >  1:2193230/1‑36 (MQ=255)
                 cGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAg                  <  1:1025905/36‑1 (MQ=255)
                 cGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAg                  <  1:1174110/36‑1 (MQ=255)
                  gAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGt                 <  2:1243820/36‑1 (MQ=255)
                  gAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGt                 >  2:3745670/1‑36 (MQ=255)
                  gAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGt                 >  1:1945578/1‑36 (MQ=255)
                  gAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGt                 >  2:747940/1‑36 (MQ=255)
                   aaCGTAAGCCTCAGGTTGTACTGACCCCAAAAAGtt                >  1:915363/1‑36 (MQ=255)
                    aCGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTg               >  2:2656807/1‑36 (MQ=255)
                     cGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTgg              <  1:2555338/36‑1 (MQ=255)
                     cGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTgg              <  1:453574/36‑1 (MQ=255)
                     cGTAAGCCTCAGGGTGTACTGACCCCAAAAAGTTgg              >  1:2279953/1‑36 (MQ=255)
                      gTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGa             >  2:230400/1‑36 (MQ=255)
                       tAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGAc            <  1:907820/36‑1 (MQ=255)
                       tAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGAc            >  2:3678910/1‑36 (MQ=255)
                        aaGCCTCAGGTTGTACTGACCCCCAAACGTTGGACa           >  1:2774679/1‑36 (MQ=18)
                        aaGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACa           <  1:2131548/36‑1 (MQ=255)
                        aaGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACa           <  2:1717923/36‑1 (MQ=255)
                         aGCCTCAGGTTGTACTGACCCCAAAAAGATGGACAg          >  2:3512290/1‑36 (MQ=255)
                          gCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGt         >  1:1961921/1‑36 (MQ=255)
                          gCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGt         <  1:3662607/36‑1 (MQ=255)
                          gCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGt         <  2:151088/36‑1 (MQ=255)
                          gCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGt         <  2:1502126/36‑1 (MQ=255)
                           ccTCGGGTTGTACTGACCCCAAAAAGTTGGCCCGtt        >  2:1143953/1‑36 (MQ=14)
                            cTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTa       >  1:3225078/1‑36 (MQ=255)
                               aGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAac    >  2:671232/1‑36 (MQ=38)
                               aGGTTGTACTGACCCCAAAAAGTTGGACAGTAaaaa    >  1:1704240/1‑35 (MQ=255)
                               aGGTTGTACTGACCCCAAAAAGTTGGACAGATAAac    >  2:2405311/1‑36 (MQ=255)
                                acctGTACTGACCCCAAGAAGTTGGACAGTTAAgca   <  2:192327/33‑1 (MQ=11)
                                 ggtGTACTGACCCCAAAAAGTTGGACAGTTCAccac  >  2:2088543/3‑36 (MQ=11)
                                 gTTGTACTGACCCCAAAAAGGTGGACAGGGAAacac  <  2:1516827/36‑1 (MQ=11)
                                   |                                 
TTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACAC  >  REL606/2774400‑2774468

Base quality scores:  ATCG  < 3 ≤  ATCG  < 10 ≤  ATCG  < 19 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG