Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6064,628,0270T→G25.9% 11.358440arcADNA‑binding response regulator in two‑component regulatory system with ArcB or CpxA
Reads supporting (aligned to +/- strand):  new base (15/0):  ref base (18/25):  total (33/25)

TCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCT  >  REL606/4627997‑4628061
                              |                                  
tCGCCATCAGGGCCGATCAACGAACGGCTGGTggtt                               >  1:663866/1‑33 (MQ=37)
 cGCCATCAGGGCCGATCAACGAACGGCTGTTGATGt                              <  1:86101/36‑1 (MQ=255)
 cGCCATCAGGGCCGATCAACGAACGGCTGTGGGTGt                              >  2:597819/1‑36 (MQ=37)
 cGCCATCAGGGCCGATCAACGAACGGCAGGTTATGt                              >  1:2778736/1‑36 (MQ=25)
  gCCATCAGGGCCGATCAACGAACGGCTGTTGATGTc                             <  1:1368962/36‑1 (MQ=255)
   ccATCAGGGCCGATCAACGAACGGCTGTTGATGTcc                            <  2:1290059/36‑1 (MQ=255)
   ccATCAGGGCCGATCAACGAACGGCTGTTGATGTcc                            <  2:2071613/36‑1 (MQ=255)
    cATCAGGGCCGATCAACGAACGGCTGTTGCTGTctc                           >  2:1823403/1‑34 (MQ=38)
    cATCAGGGCCGATCAACGAACGGCTGTTGATGttcc                           >  2:1809586/1‑33 (MQ=255)
     aTCAGGGCCGATCAACGAACGGCTGTTGATGTCCAg                          <  1:1858348/36‑1 (MQ=255)
     aTCAGGGCCGATCAACGAACGGCTGTTGATGTCCAg                          <  2:1984910/36‑1 (MQ=255)
     aTCAGGGCCGATCAACGAACGGCTGGTGGTGTCCAg                          >  1:1643964/1‑36 (MQ=37)
      tCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGt                         <  2:1780774/36‑1 (MQ=255)
       cAGGGCCGATCAACGAACGGCTGTTGATGTCCAGtt                        <  1:452170/36‑1 (MQ=255)
       cAGGGCCGAGCAACGAACGGCTGGTGATGTCCAGtt                        >  1:1113748/1‑36 (MQ=37)
        aGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTc                       <  2:572365/36‑1 (MQ=255)
          ggCCGATCAACGAACGGCTGGTGGTTTGCAGTTtcc                     >  2:2564767/1‑36 (MQ=12)
          ggCCGATCAACGAACGGCTGGTGGTGTGCCGTTtcc                     >  2:2236778/1‑36 (MQ=16)
           gCCGATCAACGAACGGCTGTCGTTTGCCCGTTcccc                    >  2:3692229/1‑35 (MQ=12)
            ccGATCAACGAACGGCTGGTGATGTTCAGTTcccca                   >  1:2908066/1‑34 (MQ=37)
             cGATCAACGAACGGCTGGTGATGTCCCGTTcccccc                  >  2:769884/1‑33 (MQ=21)
             cGATCAACGAACGGCTGGTGATGTCCCGTTCCCCAc                  >  1:3261262/1‑36 (MQ=21)
              gATCGACGGACGGCTTTTGGTTTTCAGTTCCCAAcc                 <  1:2575006/36‑1 (MQ=12)
              gATCAACGAACGGCTGTTGATGTCCAGTTCCCAAcc                 <  2:1765360/36‑1 (MQ=255)
              gATCAACGAACGGCTGGTGGTGTCTAGTTGCCCAca                 >  2:1597322/1‑35 (MQ=16)
              aaTCAACGAACGGCTGTTGATGTCCAGTTCCCAAcc                 <  1:868481/35‑1 (MQ=255)
               aTCAACGAACGGCTGTTGATGTCCAGTTCCCCACCa                >  2:1930447/1‑36 (MQ=255)
               aTCAACGAACGGCTGTTGATGTCCAGTTCCCAACCa                <  2:825488/36‑1 (MQ=255)
               aTCAACGAACGGCTGTTGATCTCCATTTCCCAACCa                >  2:1439245/1‑36 (MQ=38)
               aTCAACGAACGGCTGGTGTTGTCCCCTTTCCACCCa                >  1:3046375/1‑36 (MQ=12)
               aTCAACGAACGGCTGGTGGTGTCCAGTTTCCACccc                >  2:973912/1‑35 (MQ=16)
                tCAACGAACGGCTGTTGATGTCCAGTTCCCAACCAt               <  2:2394286/36‑1 (MQ=255)
                tCAACGAACGGCTGGTGGTGTCCCGTTTCCCACCAt               >  2:3620326/1‑36 (MQ=16)
                 cAACGAACGGCTGTTGATGTCCCGATCCCCACCact              >  1:3470229/1‑34 (MQ=25)
                 cAACGAACGGCTGTTGATGTCCAGCTCCCAACCAtt              >  1:3465000/1‑36 (MQ=255)
                 cAACGAACGGCTGTTGATATCCAGTTCCCAACCCtt              >  2:2441748/1‑36 (MQ=37)
                  aacggacgGCTGTTGATGTCCAGTTCCCAACCATTg             <  1:924392/36‑1 (MQ=255)
                  aacgaacgGCTGTTGATGTCCAGTTCCCAACCATTg             <  1:3012820/36‑1 (MQ=255)
                  aacgaacgGCTGTTGATGTCCACTTCCCAAACATTg             >  1:3443578/1‑36 (MQ=37)
                  aacgaacgGCTGGTGATGTTCAGTTCCCAACCATTg             >  2:3654167/1‑36 (MQ=37)
                   acgaacgGCTGGTGTTGTTCTGTTTCCCTCCAtttt            >  2:3675464/1‑34 (MQ=0)
                    cgaacgGCTGTTGATGTCCAGTTCCCAACCATTGaa           <  1:3226770/36‑1 (MQ=255)
                     gaacgGCTGTTGATGTCCAGTTCCCAACCATTGAAc          >  2:982545/1‑36 (MQ=255)
                      aacgGCTGTTGATGTCCAGTTCCCAACCATTGAACt         <  1:2411330/36‑1 (MQ=255)
                       acgGCTGTTGATGTCCAGTTCCCAACCATTGAACtt        <  1:2910917/36‑1 (MQ=255)
                       acgGCTGTTGATGTCCAGTTCCCAACCATTGAACtt        <  1:1260397/36‑1 (MQ=255)
                        cgGGTGTTGATGTCCAGTTCCCAACCATTGAACTTg       <  1:3591594/36‑1 (MQ=255)
                        cgGCTGTTGATGTCCCGTTCCCCACCCCAGAACttt       >  2:1876295/1‑35 (MQ=16)
                         ggCTGTTGATGTCCAGTTCCCAACCATTGAACTTGt      <  1:1071026/36‑1 (MQ=255)
                          gCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTa     <  2:3588381/36‑1 (MQ=255)
                          gCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTa     <  2:1454489/36‑1 (MQ=255)
                          gCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTa     <  1:1623627/36‑1 (MQ=255)
                           cTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAg    >  2:2044806/1‑36 (MQ=255)
                           cTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAg    >  2:1161947/1‑36 (MQ=255)
                           cTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAg    >  2:3733478/1‑36 (MQ=255)
                            tGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGc   >  2:499508/1‑36 (MQ=255)
                            tGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGc   >  1:154790/1‑36 (MQ=255)
                             gTTGATGTCCAGTTCCCAACCATTGAACTCGTAGCt  >  1:486608/1‑36 (MQ=255)
                              |                                  
TCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCT  >  REL606/4627997‑4628061

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 10 ≤  ATCG  < 24 ≤  ATCG  < 32 ≤  ATCG