Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6064,080,9860T→G41.7% 10.325intergenic (+74/‑186)sodA/kdgTsuperoxide dismutase, Mn/2‑keto‑3‑deoxygluconate permease
Reads supporting (aligned to +/- strand):  new base (10/0):  ref base (1/13):  total (12/13)

ATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAAT  >  REL606/4080952‑4081021
                                  |                                   
atCGGCTTAAAAAATGAACCATCGCCAACGGCggtg                                    <  2:574111/36‑1 (MQ=255)
atCAGCTTAAAAAATGAACCATCGCCAACGGCggtg                                    <  2:2965008/36‑1 (MQ=255)
atCAGCTTAAAAAATGAACCATCGCCAACGGCggtg                                    <  2:3508089/36‑1 (MQ=255)
atCAGCTTAAAAAATGAACCATCGCCAACGGCggtg                                    <  2:1785937/36‑1 (MQ=255)
 tCAGCTTAAAAAATGAACCATCGCCAACGGCggggg                                   >  2:3347899/1‑36 (MQ=255)
  cAGCTTAAAAAATGAACCATCGCCAACGGCggtggt                                  >  2:3419631/1‑36 (MQ=255)
   aGCTTAAAAAATGAACCATCGCCAACGGCggggggt                                 >  1:1623626/1‑34 (MQ=37)
   aGCTTAAAAAATGAACCATCGCCAACGGCggggggg                                 >  2:3640797/1‑34 (MQ=37)
    gCTTAAAAACTGAGCCATCGCCAACGGCTGTGGttt                                <  2:3661985/36‑1 (MQ=25)
    gCTAAAAAAATGAACCATCGTCAACGGCGGTGGttt                                <  2:81789/36‑1 (MQ=37)
     gttAAAGAATGATCCATCGCCAACGGCGGTGGtttt                               <  1:400801/35‑1 (MQ=37)
      ttAAAAAATGAACCATCGCCAACGGCGGTGGttttt                              <  1:1646306/36‑1 (MQ=255)
       tAAAAAATGAACCATCGCCAACGGCGGGGGgttttt                             >  2:630991/1‑36 (MQ=25)
       tAAAAAATGAACCATCGCCAACGGCGGAGGtttttt                             >  1:2708798/1‑36 (MQ=255)
        naaaaaTGAACCATCGCCNACGGCGGGGGgcttttt                            >  2:768844/2‑36 (MQ=18)
        aaaaaaTGAACCATCGCCAACGGCGGGGGgtttttt                            >  1:789344/1‑36 (MQ=25)
        aaaaaaTGAACCATCGCCAACGGCGGGGGgtttttt                            >  2:793702/1‑36 (MQ=25)
        aaaaaaTAAACCATCGCCAACGGCGGTGGttttttt                            <  1:2745291/36‑1 (MQ=255)
         aaaaaTGAACCATCGCCAACGGCGGGGGggtttttt                           >  1:1283799/1‑35 (MQ=18)
          aaaaTGAACCATCGCCAACGGCGGGGGgtttttttt                          >  2:2741277/1‑34 (MQ=21)
          aaaaTGAACCATCGCCAACGGCGGGGGgtttttttt                          >  1:1302903/1‑34 (MQ=21)
           aaaTGAACCATCGCCAACGGCGGGGGgttttttttt                         >  2:943375/1‑33 (MQ=21)
            aaTGAACCATCGCCAACGGCGGGGGGTTTTTtgttt                        >  2:2861840/1‑34 (MQ=25)
               gAACCACCGCCAACGGCGGTGGTCTTTTTATTATcg                     <  2:411210/36‑2 (MQ=12)
                   cATCGCCAACGGCGGTGGTTTTTTTGTGATCAAttt                 <  2:1519901/36‑1 (MQ=255)
                    agcGCCAACGGCGGTGGTTTTTTTGTGATCAATTTc                <  1:1823759/34‑1 (MQ=255)
                    aTCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTc                <  1:2130593/36‑1 (MQ=255)
                        ccAGCGGCGGTGGTTTTTTTGTGATCAACTTCaaaa            <  2:713922/36‑1 (MQ=37)
                         cAACGGCGGGGGGGTTTTTTTTATCTATTTCtaact           >  1:695609/1‑34 (MQ=2)
                             ggcggTGGTTTTTTTGTGATCAATTTCAAAATaaaa       <  1:944370/36‑1 (MQ=255)
                             ggcggTGGTTTTTTTGTGATCAATTTCAAAATaaaa       <  1:3475582/36‑1 (MQ=255)
                              gcggTGGTTTTTTTGTGATCAATTTCAAAATaaaaa      <  2:3228490/36‑1 (MQ=255)
                              gcggTGATTTTTTTGTGATCAATTTCAAAATaaaaa      >  2:2790537/1‑36 (MQ=255)
                                  tggtTTTGTTGTGATCAATTTCAAAATAAAAACAAt  <  1:3060235/36‑1 (MQ=255)
                                  |                                   
ATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAAT  >  REL606/4080952‑4081021

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 13 ≤  ATCG  < 25 ≤  ATCG  < 32 ≤  ATCG