Predicted mutation
evidence seq id position mutation annotation gene description
MC JC REL606 3,894,997 Δ6,934 bp IS150‑mediated rbsD[yieO] rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 3893578–3894995 3901930 6936–8353 16 [14] [1] 40 insJ‑5–[yieO] insJ‑5, insK‑5, rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 3652533NA (NA)34 (0.650) 23/66 0.9 97.1% noncoding (1443/1443 nt) IS150 repeat region
?REL606 3901931 = 1 (0.020)coding (489/1428 nt) yieO predicted multidrug or homocysteine efflux system

TAACGCCA.G.ACTGTACTGCACCCATTTTGTTGGACGATGAAATG  >  REL606/3893543‑3893586
                                    |         
tAACGCCAGG.ACTGTACTGCACCCATTTTGTTGGAc           >  1:1043061/1‑36 (MQ=17)
tAACGCCA.GTACTGTACTGCACCCATTTTGTTGGAc           <  2:318651/36‑1 (MQ=17)
 aaCGCCAGG.ACTGTACTGCACCCATTTTGTTGGACg          >  1:339039/1‑36 (MQ=14)
 aaCGCCAGG.ACTGTACTGCACCCATTTTGTTGGACg          >  2:799598/1‑36 (MQ=14)
   cGCCAGG.ACTGTACTGCACCCATTTTGTTGGACGAt        <  1:2325459/36‑1 (MQ=11)
   cGCCAGG.ACTGTACTGCACCCATTTTGTTGGACGAt        >  1:2395945/1‑36 (MQ=11)
   cGCCAGG.ACTGTACTGCACCCATTTTGTTGGACGAt        >  1:261264/1‑36 (MQ=11)
      cagg.ACTGTACTGCACCCATTTTGTTGGACGATGaa     >  1:3194748/4‑36 (MQ=255)
       agg.ACTGTACTGCACCCATTTTGTTGGACGATGaaa    >  1:3101448/3‑36 (MQ=25)
       agg.ACTGTACTGCACCCATTTTGTTGGACGATGaaa    <  1:3585946/34‑1 (MQ=25)
        gg.ACTGTACTGCCCCCATTTTGTTGGCCGATGAAAt   <  2:1517271/35‑1 (MQ=11)
        gg.ACTGTACTGCACCCATTTTGTTGGACGATGAAAt   >  1:988429/2‑36 (MQ=25)
        gg.ACTGTACTGCACCCATTTTGTTGGACGATGAAAt   <  2:1939728/35‑1 (MQ=25)
         g.ACTGTACTGCACCCATTTTGTTGGACGATGAAATg  >  1:2550472/1‑36 (MQ=35)
         g.ACTGTACTGCACCCATTTTGTTGGACGATGAAATg  <  2:3271361/36‑1 (MQ=35)
         g.ACTGTACTGCACCAATTTTGTTGGACGATGAAATg  >  2:1406758/1‑36 (MQ=255)
                                    |         
TAACGCCA.G.ACTGTACTGCACCCATTTTGTTGGACGATGAAATG  >  REL606/3893543‑3893586

Base quality scores:  ATCG  < 3 ≤  ATCG  < 9 ≤  ATCG  < 19 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG