Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6062,056,8490T→G28.6% 10.949877cpsBmannose‑1‑phosphate guanyltransferase
Reads supporting (aligned to +/- strand):  new base (14/0):  ref base (11/24):  total (25/24)

AATCACATCGCCGTGGCAAACGTTGCCCTCGGCGGTGTGGGCGCTGATCTCCCATAATGAAGACCAAGAAC  >  REL606/2056814‑2056884
                                   |                                   
aaccaccTCGCCGTGGCCAGCGTTGCCCTCGGCGgt                                     <  2:1227176/33‑1 (MQ=19)
 aTCACATCGCCGTGGCAAACGTTGCCCTCGGCGgtg                                    <  1:1629143/36‑1 (MQ=255)
 aTCACATCGCCGTGGCAAACGTTGCCCTCGGCGgtg                                    <  2:2243525/36‑1 (MQ=255)
  tCACATCGCCGTGGCAAACGTTGCCCTCTGCGgagt                                   >  1:2014023/1‑36 (MQ=37)
  tCACATCGCCGTGGCAAACGTTGCCCTCGGCGgtgt                                   <  2:2238892/36‑1 (MQ=255)
  tCACATCGCCGTGGCAAACGTTGCCCTCGGCGgggt                                   >  2:849133/1‑36 (MQ=255)
   cacaTCGCCGTGGCAAACGTTGCCCTCGGCGgtggg                                  >  2:3711986/1‑34 (MQ=255)
   cacaTCGCCGTGGCAAACGTTGCCCTCGGCGGtgtg                                  <  2:1336529/36‑1 (MQ=255)
   cacaTCGCCGTGGCAAACGTTGCCCTCGGCGGggtg                                  >  1:3312082/1‑36 (MQ=255)
     caTCGCCGTGGCAAACGTTGCCCTCGGCGGTGTggg                                <  1:2348523/36‑1 (MQ=255)
     caTCGCCGTGGCAAACGTTGCCCTCGGCGGTGTggg                                <  1:2144964/36‑1 (MQ=255)
     caTCGCCGTGGCAAACGTTGCCCTCGGCGGGGGggg                                >  1:599010/1‑36 (MQ=37)
     caTCGCCGTGGCAAACGTTGCCCTCGGCGGGGGggg                                >  1:146157/1‑36 (MQ=37)
      aTCGCCGTGGCAAATGTTGCCCTCGGCGGGGTgggt                               >  2:3179011/1‑35 (MQ=37)
      aTCGCCGTGGCAAACGTTGCCCTCGGCGGTGTGGgc                               <  1:454118/36‑1 (MQ=255)
      aTCGCCGTGGCAAACGTTGCCCTCGGCGGTGTGGgc                               <  2:2005947/36‑1 (MQ=255)
      aTCGCCGTGGCAAACGTTGCCCTCGGCGGGGTgggg                               >  2:3390345/1‑35 (MQ=255)
      aTCGCCGTGGCAAACGTTGCCCTCGGCGGGGTgggg                               >  2:873572/1‑35 (MQ=255)
      aTCGCCGTGGCAAACGTTGCCCTCGGCGGGGGgggg                               >  1:1574025/1‑35 (MQ=25)
      aTCGCCGTGGCAAACGTTGCCCTCGGCGGGGGgggg                               >  2:2544313/1‑35 (MQ=25)
       tCGCCGTGGCAAACGTTGCCCTCGGCGGGGGggggg                              >  1:2855011/1‑34 (MQ=25)
        cGCCGTGGCAAACGTTGCCCTCGGCGGGGGgggggg                             >  1:749046/1‑33 (MQ=21)
         gCCGTGGCAAACGTTGCCCTCGGCGGTGTGGGCGCt                            <  2:1097646/36‑1 (MQ=255)
         gCCGTGGCAAACGTTGCCCTCGGCGGGGGGGgcggg                            >  1:1495061/1‑34 (MQ=25)
         gCCGTGGCAAACGTTGCCCTCGGCGGGGGGGgcgcg                            >  2:1998815/1‑35 (MQ=25)
          ccGTGGCAAACGTTGCCCTCGGCGGTGGGGGGGCtt                           >  1:3496083/1‑35 (MQ=25)
           cGTGGCAAACGTTGCCCTCGGCGGTGTGGGCGCTGa                          <  2:2896310/36‑1 (MQ=255)
           cGTGGCAAACGTTGCCCTCGGCGGGGTGGGGGGTGa                          >  1:1251785/1‑36 (MQ=21)
            gTGGCAAACGTTGCCCTCGGCGGTGTGGGCGCTGAt                         <  1:3410/36‑1 (MQ=255)
              ggCAAACGTTGCCCTCGGCGGTGTGGGCGCTGAtct                       <  1:274368/36‑1 (MQ=255)
              ggCAAACGTTGCCCTCGGCGGTGTGGGCGCTGAtct                       <  1:1419195/36‑1 (MQ=255)
              ggCAAACGTTGCCCTCGGCGGGGGGGGCGCCGAttt                       >  2:2052543/1‑34 (MQ=18)
                cAAACGTTGCCCTCGGCGGTGTGGGCGCTGATCTcc                     <  1:2355280/36‑1 (MQ=255)
                cAAACGTTGCCCCCCGCGGGCTGGGGGCCGATCTcc                     >  1:3298195/1‑36 (MQ=12)
                 aaaCGTTGCCCTCGGCGGTGTGGGGGCTGAtctctc                    >  1:2366895/1‑34 (MQ=37)
                  aaCGTTGCCCTCGGCGGTGTGGGCGCTGATCTCCCa                   <  2:737769/36‑1 (MQ=255)
                   aCGTTGCCCTCGGCGGTGTGGGCGGTGATCTtccct                  >  2:869519/1‑34 (MQ=25)
                   aCGTTGCCCTCGGCGGTGTGGGCGCTGATCTCCCAt                  <  1:841552/36‑1 (MQ=255)
                   aCGTTGCCCTCGGCGGTGTGGGCGCTGATCTCCCAt                  <  2:378455/36‑1 (MQ=255)
                    cGTTGCCCTCGGCGGTGTGGGCGCTGATCTCCCATa                 <  1:2317724/36‑1 (MQ=255)
                     gTTGCCCTCGGCAGTGTGGGCGCTGATCTCCCATaa                <  1:554736/36‑1 (MQ=255)
                      ttGCGCTCGGCGGTGTGGGCGCTGATCTCCCATAAt               <  2:878907/36‑1 (MQ=255)
                      ttGCCCTCGGCGGTGTGGGCGCTGATCTCCCATAAt               <  2:1391754/36‑1 (MQ=255)
                       tGCCCTCGGCGGTGTGGGGGCTGATTTCCCCTAAtt              >  1:1125589/1‑35 (MQ=25)
                       tGCCCTCGGCGGTGTGGGCGCTGATCTCCCATAATg              <  2:1619496/36‑1 (MQ=255)
                         cccTCGGCGGTGTGGGGGGTGATTTCCCCTTATGaa            >  2:1813390/1‑36 (MQ=16)
                         cccTCGCCGGTGTGGGCGCTGATCTCCCATAATGaa            <  2:2651056/36‑1 (MQ=255)
                          ccTCGGCGGTGTGGGGGGTGATCTCCCCTAATGAAg           >  2:3172974/1‑36 (MQ=25)
                            tCGGCGGTGTGGGCGCTGGTCTCCCATAATGGAGAc         >  2:1438094/1‑36 (MQ=37)
                              ggcggTGTGGGCGCTGATCTCCCATAATGAAGACCa       >  1:2273721/1‑36 (MQ=255)
                              ggcggTGTGGGCGCTGATCTCCCATAATGAAGACCa       <  1:2052721/36‑1 (MQ=255)
                              ggcggTGTGGGCGCTGATCTCCCATAATGAAGACCa       >  1:139414/1‑36 (MQ=255)
                               gcggTGGGGGCGCTGATCTCCCAGAATGAAGACCaa      <  2:702110/36‑1 (MQ=37)
                                cggTGTGGGCGCTGATCTCCCATAATGAAGACCAAg     <  2:1335408/36‑1 (MQ=255)
                                cggTGTGGGCGCTGATCTCCCATAATGAAGACCAAg     <  1:2698463/36‑1 (MQ=255)
                                cggTGTAGGCGCTGATCTCCCATAATGAAGACCAAg     <  1:853718/36‑1 (MQ=255)
                                 ggTGTGGGCGCTGATCTCCCATAATGAAGACCAAGa    >  1:1697848/1‑36 (MQ=255)
                                 ggTGTGGGCGCTGATCTCCCATAATGAAGACCAAGa    >  2:179716/1‑36 (MQ=255)
                                  gtgtGGGCGCTGATCTCCCATAATGAAGACCAAGaa   >  2:141168/1‑36 (MQ=255)
                                  gtgtGGGCGCTGATCTCCCATAATGAAGACCAAGaa   <  1:1866034/36‑1 (MQ=255)
                                   tgtgGGCGCTGATCTCCCATAATGAAGGCCAAGAAc  <  1:1759573/36‑1 (MQ=255)
                                   tgtgGGCGCTGATCTCCCATAATGAAGACCAAGAAc  >  1:3725184/1‑36 (MQ=255)
                                   tgtgGGCGCTGATCTCCCATAATGAAGACCAAGAAc  <  1:2073747/36‑1 (MQ=255)
                                   |                                   
AATCACATCGCCGTGGCAAACGTTGCCCTCGGCGGTGTGGGCGCTGATCTCCCATAATGAAGACCAAGAAC  >  REL606/2056814‑2056884

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 13 ≤  ATCG  < 27 ≤  ATCG  < 32 ≤  ATCG