Predicted mutation
evidence seq id position mutation annotation gene description
RA REL606 2,082,685 G→A A494V (GCT→GTT)  yegI ← hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6062,082,6850G→A100.0% 97.0 311481yegIhypothetical protein
Reads supporting (aligned to +/- strand):  new base (21/10):  ref base (0/0):  total (21/10)

CGTTCCCTTGCGGTGTCGTGAAGTGCTGCCAGAGCACGTTTTTCTTCCTCCGGTAACCCGAGCATT  >  REL606/2082652‑2082717
                                 |                                
cGTTCCCTTGCGGTGTCGTGAAGTGCTGCCAGAACa                                >  2:896039/1‑36 (MQ=255)
cGTTCCCTTGCGGTGTCGTGAAGTGCTGCCAGAACa                                >  2:3522087/1‑36 (MQ=255)
cGTTCCCTTGCGGTGTCGTGAAGTGCTGCCAGAACa                                >  2:1812478/1‑36 (MQ=255)
  ttCCCTTGCGGTGTCGTGAAGTGCTGCCAGAACACg                              >  2:2399619/1‑36 (MQ=255)
  tgcccTGGCGGTGTCGTGAAGTGCTGCCAGAACACg                              <  1:1478860/34‑1 (MQ=37)
   acccTTGCGGTGTCGTGAAGTGCTGCCAGAACACGt                             >  2:962443/2‑36 (MQ=255)
      cTTGCGGTGTCGTGAAGTGCTGCCAGAACACGtttt                          <  1:1304903/36‑1 (MQ=255)
      cTTGCGGTGTCGTGAAGTGCTGCCAGAACACGtttt                          >  2:3704355/1‑36 (MQ=255)
      cTTGCGGTGTATTGAAGTGCTGCCAGAACACGtttt                          <  2:202700/36‑1 (MQ=25)
       ttGCGGTGTCGTGAAGTGCTGCCAGAACACGttttt                         >  2:1028543/1‑36 (MQ=255)
        tGCGGTGTCGTGAAGTGCTGCCAGAACACGTTTttc                        <  2:2226059/36‑1 (MQ=255)
        tGCGGTGTCGTGAAGTGCTGCCAGAACACGTTTttc                        >  1:1187499/1‑36 (MQ=255)
         gCGGTGTCGTGAAGTGCTGCCAGAACACGTTTttct                       >  1:3119428/1‑36 (MQ=255)
          cGGTGTCGTGAAGTGCTGCCAGAACACGTTTttctt                      >  1:657407/1‑36 (MQ=255)
          cGGTGTCGTGAAGTGCTGCCAGAACACGTTTttctt                      >  1:2084856/1‑36 (MQ=255)
           ggTGTCGTGAAGTGCTGCCAGAACACGTTTttcttc                     >  2:610749/1‑36 (MQ=255)
            gtgtCGTGAAGTGCTGCCAGAACACGTTTTTCTtcc                    >  1:3722440/1‑36 (MQ=255)
            gtgtCGTGAAGTGCTGCCAGAACACGTTTTTCTtcc                    >  1:1930372/1‑36 (MQ=255)
             tgtCGTGAAGTGCTGCCAGAACACGTTTTTCTtcct                   >  1:1805251/1‑36 (MQ=255)
             tgtCGTGAAGTGCTGCCAGAACACGTTTTTCTtcct                   <  1:2197183/36‑1 (MQ=255)
              gtCGTGGAGTGCTGCCAGGACACGTTTTTCTtcctc                  <  1:749567/36‑1 (MQ=25)
              gtCGTGAAGTGCTGCCAGAACACGTTTTTCTtcctc                  >  2:600226/1‑36 (MQ=255)
                cGTGAAGTGCTGCCAGAACACGTTTTTCTTCCTCCg                >  1:841856/1‑36 (MQ=255)
                cGTGAAGTGCTGCCAGAACACGTTTTTCTTCCTCCg                <  1:3057066/36‑1 (MQ=255)
                 gTGAAGTGCTGCCAGAACACGTTTTTCTCCCTCCgg               >  2:3024778/1‑36 (MQ=37)
                  tGAAGTGCTGCCAGAACACGTTTTTCTTCCTCCGGt              >  1:1842684/1‑36 (MQ=255)
                    aggTGTTGCCAGAACACGTTTTTCTTCCTCCGGTaa            <  2:1065650/34‑1 (MQ=25)
                     aGTGCTGCCAGAACACGTTTTTCTTCCTCCGGTAAc           >  1:1936281/1‑36 (MQ=255)
                      gTGCTGCCAGAACACGTTTTTCTTCCTCCGGTAAcc          >  2:1561393/1‑36 (MQ=255)
                         ctgcCAGAACACGTTTTTCTTCCTCCGGTAACCCGa       <  2:2557497/36‑1 (MQ=255)
                             cAGAACACGTTTTTCTTCCTCCGGTAACCCGAGCAt   <  1:2815179/36‑1 (MQ=255)
                              agaaCACGTTTTTCTTCCTCCGGTAACCCGAGCAtt  <  1:2834824/36‑1 (MQ=255)
                              agaaCACGTTTTTCTTCCTCCGGTAACCCGAGCAtt  <  1:708533/36‑1 (MQ=255)
                                 |                                
CGTTCCCTTGCGGTGTCGTGAAGTGCTGCCAGAGCACGTTTTTCTTCCTCCGGTAACCCGAGCATT  >  REL606/2082652‑2082717

Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 19 ≤  ATCG  < 30 ≤  ATCG  < 32 ≤  ATCG