Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6062,304,3690A→G29.5% 11.561758yfaDhypothetical protein
Reads supporting (aligned to +/- strand):  new base (18/0):  ref base (16/27):  total (34/27)

GATTAATGACTATTGCTGAACGGCTACGGCA.GGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATG  >  REL606/2304336‑2304404
                                  |                                   
gaTTAATGACTATTGCTGAACGGCTACGGCA.GGAAg                                   <  2:3425280/36‑1 (MQ=255)
  ttAATGACTCTTGCTGAACGGCTACGGCA.CGGAggg                                 >  2:724997/1‑36 (MQ=25)
  ttAATGACTATTGCTGAACGGCTACGGCA.GGGAggg                                 >  2:506364/1‑36 (MQ=255)
   tAATGACTATTGCTGAACGGCTACGGCA.GGGAgggg                                >  2:1362800/1‑35 (MQ=255)
   tAATGACTATTGCTGAACGGCTACGGCA.GGGAgagg                                >  2:574035/1‑33 (MQ=37)
   tAATGACTATTGCTGAACGGCTACGGCA.GGAAGGGc                                <  2:911140/36‑1 (MQ=255)
    aaTGACTATTGCTGAACGGCTACGGCAGGGAAgggg                                >  2:1537355/1‑35 (MQ=37)
    aaTGACTATTGCTGAACGGCTACGGCA.GGGAggggc                               >  1:1829033/1‑34 (MQ=37)
     aTGACTATTGCTGAACGGCTACGGCA.GGAAGGGCAt                              <  2:2024864/36‑1 (MQ=255)
     aTGACTAGTGCTGAACGGCTACGGCA.GGAAGGGCAt                              <  2:200237/36‑1 (MQ=255)
      tGACTATTGCTGAACGGCTACGGCA.GGGAGGGcgta                             >  2:1963370/1‑33 (MQ=37)
      tGACTATTGCTGAACGGCTACGGCA.GGGAGGGCacc                             >  1:308825/1‑34 (MQ=37)
      tGACTATTGCTGAACGGCTACGGCA.GGAAGGGCATc                             <  2:1186581/36‑1 (MQ=255)
       gACTATTGCTGAACGGCTACGGCA.GGAAGGGCATCa                            <  2:2573338/36‑1 (MQ=255)
       gACTATTGCTGAACGGCTACGGCA.GGAAGGGCATCa                            <  1:2030487/36‑1 (MQ=255)
        aCTATTGCTGAACGGCTACGGGA.GGGAGGGCATCaa                           >  2:3175015/1‑36 (MQ=37)
        aCTATTGCTGAACGGCTACGGCA.GGAAGGGCATCaa                           <  2:2685497/36‑1 (MQ=255)
         cTATTGCTGAACGGCTACGGCA.GGGAGGGCATCaaa                          >  2:779225/1‑36 (MQ=255)
         cTATTGCTGAACGGCTACGGCA.GGAAGGGCCTCaaa                          >  1:2000109/1‑36 (MQ=255)
          tATTGCTGAACGGCTACGGCA.GGAAGGGGAACaaaa                         >  2:339639/1‑35 (MQ=37)
          tATTGCTGAACGGCTACGGCA.GGAAGGGCCTCaaca                         >  1:1978754/1‑34 (MQ=37)
          tATTGCTGAACGGCTACGGCA.GGAAGGGCATCAAAt                         <  1:1209902/36‑1 (MQ=255)
           aTTGCTGAACGGCTACGGCA.GGGAGGGCATCAAAtt                        >  2:1509706/1‑36 (MQ=255)
           aTTGCTGAACGGCTACGGCA.GGAAGGGCATCAAAtt                        <  1:2751394/36‑1 (MQ=255)
             tGCTGAACGGCTACGGCA.GGGAGGGGATCAAATtgg                      >  1:846539/1‑36 (MQ=38)
             tGCTGAACGGCTACGGCA.GGGAGGGCATCAAAtttg                      >  1:813142/1‑34 (MQ=38)
             tGCTGAACGGCTACGGCA.GGGAGGGCACCAAAAtgg                      >  1:2533687/1‑36 (MQ=37)
             tGCTGAACGGCTACGGCA.GGAAGGGCATCAAATtgg                      <  1:601214/36‑1 (MQ=255)
               cTGAACGGCTACGGCA.GGAGGGGGATCAAATtgggt                    >  1:577083/1‑34 (MQ=25)
               cTGAACGGCTACGGCA.GGAAGGGGATCAAAAtggct                    >  1:2017575/1‑36 (MQ=37)
                tGAACGGCTACGGCA.GGGAGGGCATCAAATtgggtg                   >  1:1622293/1‑36 (MQ=38)
                tGAACGGCTACGGCA.GGAAGGGGGTCAAATaggctg                   >  2:380284/1‑36 (MQ=25)
                tGAACGGCTACGGCA.GGAAGGGGCTCAAATaggttg                   >  2:374859/1‑36 (MQ=19)
                tGAACGGCTACGGCA.GGAAGGGGATCAAAAtggctg                   >  2:1281406/1‑36 (MQ=37)
                tGAACGGCTACGGCA.GGAAGGGCATCAAATtggctg                   <  1:291985/36‑1 (MQ=255)
                 gAACGGCTGCGGCA.GGAAGGGCATCAAATtggctgg                  <  1:2530564/36‑1 (MQ=255)
                  aaCGGCTACGGCA.GGAAGGGCATCAAATtggctgnc                 <  2:4197/36‑1 (MQ=255)
                  aaCGGCTACGGCA.GGAAGGGCATCAAATtggctggc                 <  1:2678427/36‑1 (MQ=255)
                   aCGGCTACGGCA.GGGAGAGGATTCAATttgctgggg                >  2:359226/1‑34 (MQ=9)
                    cGGCTACGGCA.GGGAGGGGATCAAAAttgctgggcg               >  2:1034494/1‑33 (MQ=16)
                     ggCTACGGCA.GGGAGGGCATCAAATTGGCTGGCGgg              >  1:2691143/1‑36 (MQ=38)
                      gCTACGGCA.GGAAGGGCATCAAATTGGCTGGCAGGa             <  2:3546533/36‑1 (MQ=255)
                      gCTACGGCA.GGAAGGGCATCAAATTGGCTGGCAGGa             <  1:2742006/36‑1 (MQ=255)
                       cTACGGCA.GGAAGGGCATCAAATTGGCTGGGAggga            >  2:3367779/1‑34 (MQ=38)
                       cTACGGCA.GGAAGGGCATCAAATTGGCTGGCAGGaa            <  1:1258479/36‑1 (MQ=255)
                        tACGGCA.GGGAGCGCATCCAGTTCGCTGGGAGGGAg           >  2:2297936/1‑36 (MQ=2)
                         aCGGCA.GGAAGGGCATCAAATTGGCTGGCAGGAAgg          <  1:837117/36‑1 (MQ=255)
                           ggCA.GGAAGGGCATACAACTGGCTGCCAGGAATGTa        >  2:68097/1‑36 (MQ=16)
                            gCA.GGAAGGGCATCAAATTGGCTGGCAGGAAGGTAt       >  1:1571205/1‑36 (MQ=255)
                             cA.GGAAGGGCATCAAATTGGCTGGCAGGAAGGTATg      >  2:923993/1‑36 (MQ=255)
                             cA.GGAAGGGCATCAAATTGGCTGGCAGGAAGGTATg      <  1:1953119/36‑1 (MQ=255)
                             cA.GGAAGGGCATCAAATTGGCTGGCAGGAAGGTATg      <  1:707078/36‑1 (MQ=255)
                             cA.GGAAGGGCATCAAATTGGCTGGCAGGAAGGGATg      >  2:764067/1‑36 (MQ=255)
                              a.GGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGc     <  2:1632939/36‑1 (MQ=255)
                              a.GGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGc     >  1:3023703/1‑36 (MQ=255)
                              a.GGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGc     <  2:3188466/36‑1 (MQ=255)
                                ggAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCa    <  1:694079/36‑1 (MQ=255)
                                ggAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCa    <  1:2934807/36‑1 (MQ=255)
                                agAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCa    <  1:2809055/35‑1 (MQ=255)
                                 gAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCAt   <  1:2261811/36‑1 (MQ=255)
                                 gAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCAt   >  2:665898/1‑36 (MQ=255)
                                  aaGGGCATCAAATTGGCTGGCAGGAAGGTATGCATg  <  2:1606060/36‑1 (MQ=255)
                                  aaGGGCATCAAATTGGCTGGCAGGAAGGTATGCATg  >  2:2726936/1‑36 (MQ=255)
                                  aaGGGCATCAAATTGGCTGGCAGGAAGGTATGCATg  >  2:2628645/1‑36 (MQ=255)
                                  aaGAGCAACAAATTGGCTGGCAGGAAGGTATGCATg  <  1:2729522/36‑1 (MQ=37)
                                  |                                   
GATTAATGACTATTGCTGAACGGCTACGGCA.GGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATG  >  REL606/2304336‑2304404

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 11 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG