Barrick Lab :: Code

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Breseq (Bacterial Genome Resequencing)
Determine mutations in evolved bacteria from next-generation sequencing data.
Evolutionary Failure Mode (EFM) Calculator
Predict hypermutable sites in an engineered DNA sequence or microbial genome.
Marker Divergence Experiments
Analyze neutral marker divergence experiments to measure evolvability.
RNA Structure Mutual Information
Predict interacting bases in an RNA alignment by estimating the phylogeny-corrected significance of mutual information between columns.

Getting started with Python for biology
Short guide and some good practices for getting started with Python for biology.
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Contributors to this topic edittopic JeffreyBarrick, MattMcGuffie
Topic revision: r17 - 13 Feb 2020 - 21:17:58 - Main.MattMcGuffie
 
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