Genome Diff file Generation

Overview

This is a series of commands to automatically generate .gd files based on naming system present in .fastq files. This will typically be the first step once you have sequencing files in .fastq format from the sequencing core. Script exists as part of barricklab respository on github.

Protocol

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1. Clone or update script from github repository:
   • Clone for first time users:
     1. cd <location_within_path>
     2. =git clone https://github.com/barricklab/barricklab.git =

Version History.

Section contains information on versions of scripts, dates scripts were used, and archived versions. Care will be taken that new scripts preserve the same command line execution and only add new functionality. Direct suggestions for improvements to Dan.

-- Main.DanielDeatherage - 29 Mar 2016