Installing breseq on TACC Ranger
Set up modules
There seem to be compiler bugs with later versions of GCC and mixing Boost compiled with those later versions of GCC.
For compiling:
$ module swap pgi gcc/4.2.0
$ module load zlib
For running (you might want to add this to
~/.profile_user
:
$ module load R
Autotools
Install the current versions of
autoconf
,
automake
,
libtool
, and
m4
.
For each:
$ ./configure --prefix=$HOME/local
$ make install
Boost
Compile and install with:
$ ./bootstrap
$ ./bjam --prefix=$HOME/local install
Breseq
Compile, install, and test with:
$ ./configure --prefix=$HOME/local
$ make install
$ make test