Difference: ToolList (1 vs. 18)

Revision 182020-07-08 - JeffreyBarrick

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Revision 172020-02-13 - MattMcGuffie

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Revision 162018-10-26 - JeffreyBarrick

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Revision 152018-10-25 - JeffreyBarrick

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Barrick Lab :: Computational Tools

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Barrick Lab :: Code

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→ Also check out

Github/BarrickLab

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→ Also check out our code repository:

Github/BarrickLab

Revision 142018-10-24 - JeffreyBarrick

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Barrick Lab :: Computational Tools

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→ Also check out the BarrickLab on Github

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→ Also check out

Github/BarrickLab

Revision 132018-03-22 - JeffreyBarrick

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Barrick Lab :: Computational Tools

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→ Also check out the BarrickLab on Github

Revision 122015-03-21 - JeffreyBarrick

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Revision 112015-03-20 - JeffreyBarrick

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Revision 102015-03-06 - JeffreyBarrick

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Revision 92012-05-01 - JeffreyBarrick

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<-- Preferences start here
 

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Tools

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Barrick Lab :: Computational Tools

Revision 82011-01-30 - JeffreyBarrick

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Revision 72011-01-20 - JeffreyBarrick

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Tools

Revision 62010-01-09 - JeffreyBarrick

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Tools

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BreSeq (Bacterial Genome Resequencing)
Determine mutations in evolved bacteria from next-generation sequencing data.

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Breseq (Bacterial Genome Resequencing)
Determine mutations in evolved bacteria from next-generation sequencing data.

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META FILEATTACHMENT	attachment="marker_divergence_icon.gif" attr="h" comment="" date="1247863094" name="marker_divergence_icon.gif" path="marker_divergence_icon.gif" size="4286" stream="marker_divergence_icon.gif" tmpFilename="/usr/tmp/CGItemp25409" user="JeffreyBarrick" version="2"

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Revision 52009-07-17 - JeffreyBarrick

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Tools

RNA Structure Mutual Information
Predict interacting bases in an RNA alignment by estimating the phylogeny-corrected significance of mutual information between columns.

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BreSeq (Bacterial Genome Resequencing)
Determine mutations in evolved bacteria from next-generation sequencing data.

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Marker Divergence Statistics
Analyze neutral marker divergence experiments to measure evolvability.

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Fluctuation Test Analysis (requires login)
Determine mutation rates from the results of a Luria-Delbrück fluctuation test.

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Marker Divergence Experiments
Analyze neutral marker divergence experiments to measure evolvability.

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Revision 42009-03-10 - JeffreyBarrick

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Tools

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Marker Divergence Statistics
Analyze neutral marker divergence experiments to measure evolvability.

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Fluctuation Test Analysis (requires login)
Determine mutation rates from the results of a Luria-Delbrück fluctuation test.

META FILEATTACHMENT	attachment="MI_icon.gif" attr="h" comment="" date="1230387418" name="MI_icon.gif" path="MI_icon.gif" size="5144" stream="MI_icon.gif" user="Main.JeffreyBarrick" version="1"

Revision 32008-12-27 - JeffreyBarrick

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Tools

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RNA Structure Mutual Information
Predict interacting bases in an RNA alignment by estimating the significance of phylogeny-corrected mutual information between columns.
BreSeq (Bacterial Genome Resequencing)
Determine mutations in evolved bacteria from next-generation sequencing data.
Marker Divergence
Analyze neutral marker divergence experiments to measure evolvability.

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	RNA Structure Mutual Information Predict interacting bases in an RNA alignment by estimating the phylogeny-corrected significance of mutual information between columns.
	BreSeq (Bacterial Genome Resequencing) Determine mutations in evolved bacteria from next-generation sequencing data.
	Marker Divergence Statistics Analyze neutral marker divergence experiments to measure evolvability.

META FILEATTACHMENT	attachment="MI_icon.gif" attr="h" comment="" date="1230387418" name="MI_icon.gif" path="MI_icon.gif" size="5144" stream="MI_icon.gif" user="Main.JeffreyBarrick" version="1"

Revision 22008-12-18 - JeffreyBarrick

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META TOPICPARENT	name="WebLeftBar"

Tools

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RNA Structure Mutual Information
Predict interacting bases in an RNA alignment by estimating the significance of phylogeny-corrected mutual information between columns.

BreSeq (Bacterial Genome Resequencing)
Determine mutations in evolved bacteria from next-generation sequencing data.
Marker Divergence
Analyze neutral marker divergence experiments to measure evolvability.

Revision 12008-09-18 - JeffreyBarrick

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Added:

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META TOPICPARENT	name="WebLeftBar"

Tools

BreSeq (Bacterial Genome Resequencing)
Determine mutations in evolved bacteria from next-generation sequencing data.
Marker Divergence
Analyze neutral marker divergence experiments to measure evolvability.

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