Difference: ProceduresPrimerExtension (1 vs. 2)

Revision 22012-05-31 - JeffreyBarrick

 
META TOPICPARENT name="ProtocolList"
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Primer Extension

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Primer Extension or Oligo Overlap Extension

 To stitch together large DNA templates from oligonucleotide fragments.
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Using Klenow Fragment (3′→5′ exo–)

This reaction will extend to single-stranded oligos with overlap to generate a complete double-stranded DNA.

The complete reaction looks like this:

component [stock] volume
Oligo 1 10 µM 2 µl
Oligo 2 10 µM 2 µl
NEBuffer 2 10× 2 µl
dNTPs 2 mM each 0.3
Klenow Fragment (3′→5&prime exo–) 5,000 units/ml 0.2 µl
ddH2O   13.5 µl
Total   20 µl

First mix together oligonucleotides and water. Heat to 90°C for 2 minutes and cool at room temperature to denature and anneal the strands for extension. Add buffer and dNTPs. Mix. Add Enzyme. Mix gently. Incubate at 37°C for 10 minutes to 1 hour.

References

  1. NEB website
 

Revision 12012-05-31 - JeffreyBarrick

 
META TOPICPARENT name="ProtocolList"

Primer Extension

To stitch together large DNA templates from oligonucleotide fragments.
 
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