Acknowledgments¶
Developers¶
- Jeffrey E. Barrick
- David B. Knoester
- Jordan Borges
- Geoffrey Colburn
- Matt Strand
- Aaron Reba
- Austin G. Meyer
- Alex Hu
breseq was initially developed at Michigan State University while Jeff was a postdoc with Dr. Richard Lenski and Dr. Charles Ofria, and while Dave was a graduate student in the lab of Dr. Philip McKinley.
It is now developed in the Barrick lab in the Department of Chemistry and Biochemistry at the University of Texas at Austin. Lab Website
Testers¶
We thank Zachary Blount, Jim Bull, Tim Cooper, Tara Gianoulis, Aleeza Gerstein, Dan Goodman, J.P. Jerome, Ranno Nahku, Elizabeth Perry, Gerda Saxer, William Trimble, Sébastien Wielgoss, and participants in Titus Brown’s 2010 summer course in next-gen sequencing at the Kellogg Biological Station for providing feedback on breseq usage and datasets for testing.
Funding¶
The following grants have supported development of breseq:
- National Institutes of Health (2009-2010). Pathway to Independence Award [K99GM087550 to J.E.B.]
- National Science Foundation (2007-2008). Postdoctoral Fellowship in Biological Informatics [DBI-0630687 to J.E.B.]
- National Science Foundation (2010). BEACON Center at Michigan State University [DBI-0939454].
