Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 3,015,771 IS150 (–) +4 bp coding (1192‑1195/1677 nt) ECB_02816 KpsD protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? REL606 588495 =NA (NA)49 (0.950) 33/66 0.2 noncoding (1/1977 nt) IS150 repeat region
?REL606 3015771 = 57 (1.040)coding (1192/1677 nt) ECB_02816 KpsD protein
* ? REL606 = 301577458 (1.120)47 (0.910) 32/66 0.2 coding (1195/1677 nt) ECB_02816 KpsD protein
?REL606 = 3652533 NA (NA)noncoding (1443/1443 nt) IS150 repeat region

TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG  >  REL606/3652501‑3652568
                                |                                   
tgtTTAACTGTCCAACTTTTTGGGGTCAGTACAAAc                                  >  1:7003323/1‑36 (MQ=35)
 gtTTAACTGTCCAACTTTTTGGGGTCAGTACAAACt                                 >  1:1061626/1‑36 (MQ=38)
  tttAACTGTCCAACTTTTTGGGGTCAGTACAAACtt                                >  1:4447368/1‑36 (MQ=40)
  tttAACTGTCCAACTTTTTGGGGTCAGTACAAACtt                                <  1:25821/36‑1 (MQ=40)
   ttAACTGTCCAACTTTTTGGGGTCAGTACAAACttt                               <  1:3608504/36‑1 (MQ=255)
    tAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTg                              <  1:1872431/36‑1 (MQ=255)
    tAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTg                              >  1:532705/1‑36 (MQ=255)
    tAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTg                              <  1:2695321/36‑1 (MQ=255)
     aaCTGTCCAACTTTTTGGGGTCAGTACAAACTTTGa                             >  1:3945825/1‑36 (MQ=255)
      aCTGTCCAACTTTTTGGGGTCAGTACAAACTTTGAt                            <  1:3743533/36‑1 (MQ=255)
       cTGTCCAACTTTTTGGGGTCAGTACAAACTTTGAtt                           <  1:2221190/36‑1 (MQ=255)
        tGTCCAACTTTTTGGGGTCAGTACAAACTTTGAttt                          <  1:3350917/36‑1 (MQ=255)
        tGTCCAACTTTTTGGGGTCAGTACAAACTTTGAttt                          <  1:6285145/36‑1 (MQ=255)
          tcgaaCTTTTTGGGGTCAGTACAAACTTTGATTtat                        <  1:3240468/33‑1 (MQ=255)
           ccAACTTTTTGGGGTCAGTACAAACTTTGATTtata                       >  1:3891593/1‑36 (MQ=255)
            cAACTTTTTGGGGTCAGTACAAACTTTGATTTATAg                      <  1:4156778/36‑1 (MQ=255)
            cAACTTTTTGGGGTCAGTACAAACTTTGATTTATAg                      >  1:6560728/1‑36 (MQ=255)
            cAACTTTTTGGGGTCAGTACAAACTTTGACTTATAg                      >  1:5800304/1‑36 (MQ=255)
            cAACTGGTTGGGGTCAGTACAAACTTTGATTTATAg                      <  1:4697816/36‑1 (MQ=21)
             aaCTTTTTGGGGTCAGTACAAACTTTGATTTATAGt                     <  1:469920/36‑1 (MQ=255)
             aaCTTTTTGGGGTCAGTACAAACTTTGATTTATAGt                     <  1:4718847/36‑1 (MQ=255)
             aaCTTTTTGGGGTCAGTACAAACTTTGATTTATAGt                     >  1:5907686/1‑36 (MQ=255)
             aaCTTTTTGGGGTCAGTACAAACTTTGATTTATAGt                     <  1:1600294/36‑1 (MQ=255)
              aCTTTTTGGGGTCAGTACAAACTTTGATTTATAGTc                    <  1:2659049/36‑1 (MQ=255)
              aCTTTTTGGGGTCAGTACAAACTTTGATTTATAGTc                    >  1:2224177/1‑36 (MQ=255)
              aCTTTTTGGGGTCAGTACAAACTTTGATTTATAGTc                    <  1:6540825/36‑1 (MQ=255)
              aCTTTTTGGGGTCAGTACAAACTATGATTTATAGTc                    >  1:880788/1‑36 (MQ=255)
                tttttGGGGTCAGTACAAACTTTGATTTATAGTCAg                  >  1:4871457/1‑36 (MQ=255)
                tttttGGGGTCAGTACAAACTTTGATTTATAGTCAg                  <  1:5427874/36‑1 (MQ=255)
                tttttGGGGTCAGTACAAACTTTGATTTATAGTCAg                  >  1:7069045/1‑36 (MQ=255)
                 ttttGGGGTCAGTACAAACTTTGATTTATAGTCAgg                 >  1:2208984/1‑36 (MQ=255)
                  tttGGGGTCAGTACAAACTTTGATTTATAGTCAGGt                <  1:3732144/36‑1 (MQ=255)
                  tttGGGGTCAGTACAAACTTTGATTTATAGTCAGGt                <  1:5058498/36‑1 (MQ=255)
                  tttGGGGTCAGTACAAACTTTGATTTATAGTCAGGt                <  1:6824223/36‑1 (MQ=255)
                  tttGGGGTCAGTACAAACTTTGATTTATAGTCAGGt                <  1:1789773/36‑1 (MQ=255)
                     ggggTCAGTACAAACTTTGATTTATAGTCAGGTggg             <  1:7307055/36‑1 (MQ=255)
                       ggTCAGTACAAACTTTGATTTATAGTCAGGTGGGGc           <  1:1028952/36‑1 (MQ=255)
                         tCAGTACAAACTTTGATTTATAGCCAGGTGGGGCtt         >  1:5822992/1‑36 (MQ=255)
                          cAGTACAAACTTTGATTTATAGTCAGGTGGGGCttt        <  1:152372/36‑1 (MQ=255)
                          cAGTACAAACTTTGATTTATAGTCAGGTGGGGCttt        <  1:5597407/36‑1 (MQ=255)
                           aGTACAAACTTTGATTTATAGTCAGGTGGGGCtttt       <  1:6711281/36‑1 (MQ=255)
                            gTACAAACTTTGATTTATAGTCAGGTGGGGCTTTtc      <  1:5791863/36‑1 (MQ=255)
                             tACAAACTTTGATTTATAGTCAGGTGGGGCTTTtct     <  1:2600592/36‑1 (MQ=255)
                              aCAAACTTTGATTTATAGTCAGGTGGGGCTTTtctc    <  1:3009665/36‑1 (MQ=255)
                                aaaCTTTGATTTATAGTCAGGTGGGGCTTTTctctt  >  1:2599701/1‑35 (MQ=255)
                                aaaCTTTGATTTATAGTCAGGTGGGGATTTTCtttg  >  1:2916888/1‑36 (MQ=25)
                                |                                   
TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG  >  REL606/3652501‑3652568

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 24 ≤  ATCG  < 30 ≤  ATCG  < 32 ≤  ATCG