New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	REL606	= 1617633	44 (0.940)	8 (0.170)	6/60	4.4	intergenic (+41/+115)	ECB_01527/ECB_01528	putative lipoprotein/antitermination protein Q homolog from lambdoid prophage DLP12
	?	REL606	4347927 =	25 (0.460)				coding (1207/1257 nt)	yjeH	predicted transporter
Rejected: Position hash score below cutoff.

ATTTTCCGGCGTTTTTCGTTTTGGCAGAAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTT  >  REL606/4347892‑4347961                                    |                                   aTTTTCCGGCGTTTTTCGTTTTGGCAGAAACAGCCa                                    >  1:5680714/1‑36 (MQ=255) aTTTTCCGGCGTTTTTCGTTTTGGCAGAAACAGCCa                                    >  1:5197212/1‑36 (MQ=255)  ttttCCGGCGTTTTTCGTTTTGGCAGAAACAGCCAt                                   >  1:5293542/1‑36 (MQ=255)    ttCCGGCGTTTTTCGTTTTGGCAGAAACAGCCATaa                                 >  1:3696894/1‑36 (MQ=255)        ggCGTTTTTCGTTTTGGCAGAAACAGCCATAAcccc                             >  1:1982207/1‑36 (MQ=255)         gCGTTTTTCGTTTTGCCAAAACCAGCCATAACCCCg                            <  1:7442102/36‑1 (MQ=21)            tttttTGTTGGGGCAGGAGCAGCCATAACCCCGCCa                         <  1:249998/36‑1 (MQ=12)            tttttCGTTTTGGCAGAAACAGCCATAACCCCGCCa                         >  1:1407151/1‑36 (MQ=255)            tttttCGTTTGGGCAAAACCAGCCATAACCCCGCCa                         <  1:4490409/36‑1 (MQ=21)             ttttCGTTTTGGCAGAAACAGCCATAACCCCGCCAg                        >  1:1334342/1‑36 (MQ=255)               ttCGTTTTGGCAGAAACAGCCATAACCCCGCCAGCa                      >  1:3127730/1‑36 (MQ=255)                   ttttGGCAGAAACAGCCATAACCCCGCCAGCATGAt                  >  1:5743636/1‑36 (MQ=255)                    tttGGCAGAAACAGCCATAACCCCGCCAGCATGATc                 >  1:2804775/1‑36 (MQ=255)                    tttGGCAGAAACAGCCATAACCCCCCCAGCATCATc                 >  1:3329955/1‑36 (MQ=25)                     ttGGCAGAAACAGCCATAACCCCGCCAGCATGATCa                >  1:6983186/1‑36 (MQ=255)                            aaccAGCCATAACCCCGCCAGCATGATCAGCGCATa         <  1:5033265/33‑1 (MQ=255)                            aaaCAGCCATAACCCCGCCAGCATGATCAGCGCATa         >  1:2557758/1‑36 (MQ=255)                             aaCAGCCATAACCCCGCCAGCATGATCAGCGCATag        >  1:365789/1‑36 (MQ=255)                               cAGCCATAACCCCGCCAGCATGATCAGCGCATagag      <  1:6155298/36‑1 (MQ=255)                               cAGCCATAACCCCGCCAGCATGATCAGCGCATagag      >  1:7372753/1‑36 (MQ=255)                               cAGCAAAAACCCCGGCAGCATGATCAGCGCATagag      <  1:3158559/36‑1 (MQ=21)                                aGCCATAACCCCGCCAGCATGATCAGCGCATAgaga     >  1:4602992/1‑36 (MQ=255)                                aGCCATAACCCCGCCAGCATGATCAGCGCATAgaga     <  1:5065741/36‑1 (MQ=255)                                aGCCATAACACCACCAGCATGATCAGCGAATAgaga     >  1:3605365/1‑36 (MQ=18)                                aGCAATAACCCCGCCAGCATGATCAGCGCATAgaga     <  1:740436/36‑1 (MQ=255)                                   cATAACCCCGCCAGCATGATCAGCGCATAGAGACtt  >  1:5019864/1‑36 (MQ=255)                                    |                                   ATTTTCCGGCGTTTTTCGTTTTGGCAGAAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTT  >  REL606/4347892‑4347961 Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 16 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG