New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	REL606	= 1617633	44 (0.940)	8 (0.170)	6/60	4.4	intergenic (+41/+115)	ECB_01527/ECB_01528	putative lipoprotein/antitermination protein Q homolog from lambdoid prophage DLP12
	?	REL606	4347927 =	25 (0.460)				coding (1207/1257 nt)	yjeH	predicted transporter
Rejected: Position hash score below cutoff.

CACCCGAAATGATACTTATTAGAAAAAAACCAGCCTTTGGGGAGGCTGGCTAAATCAGGAAATAAGC  >  REL606/1617599‑1617665                                   |                                 cACCCGAAATGATACTTATTAGAAAAAAACCAGCCt                                 >  1:885232/1‑36 (MQ=255) cACCCGAAATGATACTAATTAGAAAAAAACCAGCCt                                 <  1:1369496/36‑1 (MQ=255)   cccGAAATGATACTTATTAGAAAAAAACCAGCCttt                               >  1:4814240/1‑36 (MQ=255)   cccGAAATGATACTTATTAGAAAAAAACCAGCCttt                               <  1:4834240/36‑1 (MQ=255)    ccGAAATGATACTTATTAGAAAAAAACCAGCCTTTg                              >  1:387141/1‑36 (MQ=255)      gAAATGATACTTATTAGAAAAAAACCAGCCTTTggg                            <  1:3244838/36‑1 (MQ=255)       aaaTGATACTTATTAGAAAAAAACCAGCCTTTgggg                           >  1:2249167/1‑36 (MQ=255)         aTGATACTTATTAGAAAAAAACCAGCCTTTggggtg                         >  1:1917497/1‑34 (MQ=255)          tGATACTTATTAGAAAAAAACCAGCCTTTGGGGAgg                        >  1:2554270/1‑36 (MQ=255)             tACTTATTAGAAAAAAACCAGCCTTTGGGGAggctg                     >  1:976112/1‑36 (MQ=255)             tACGTATTAGAAAAAAACCAGCCTTTGGGGAggctg                     <  1:4069298/36‑1 (MQ=255)              aCTTATTAGAAAAAAACCAGCCTTTGGGGAggctgg                    <  1:760197/36‑1 (MQ=255)               cTTATTAGAAAAAAAGCAGCCTTTGGGGAggctggc                   <  1:5043289/36‑1 (MQ=255)               cTTATTAGAAAAAAACCAGCCTTTGGGGAggctggc                   <  1:1598842/36‑1 (MQ=255)               cTTATTAGAAAAAAACCAGCCTTTGGGGAggctggc                   >  1:4598671/1‑36 (MQ=255)                 tattaGAAAAAAACCAGCCTTTGGGGAGGCTGGCTa                 <  1:2099888/36‑1 (MQ=255)                 tatgaGAAAAAAACCAGCCTTTGGGGAGGCTGGCTa                 <  1:4187676/36‑1 (MQ=255)                  attaGAAAAAAACCAGCCTCTGGGGAGGCTGGCTaa                >  1:1162870/1‑36 (MQ=255)                   ataGAAAAAAACCAGCCTTTGGGGAGGCTGGCTaaa               <  1:5385709/35‑1 (MQ=255)                    taGAAAAAAACCAGCCTTTGGGGAGGCTGGCTAAAt              <  1:3591551/36‑1 (MQ=255)                    taGAAAAAAACCAGCCTTTGGGGAGGCTGGCTAAAt              <  1:440240/36‑1 (MQ=255)                    taGAAAAAAACCAGCCTTTGGGGAGGCTGGCTAAAt              >  1:5336188/1‑36 (MQ=255)                    taGAAAAAAACCAGCCTTTGGGGAGGCTGGCTAAAt              <  1:5926995/36‑1 (MQ=255)                     aGAAAAAAACCAGCCTTTGGGGAGGCTGGCTTAATc             >  1:1595232/1‑36 (MQ=255)                     aGAAAAAAACCAGCCTTTGGGGAGGCTGGCTAAATc             <  1:5627972/36‑1 (MQ=255)                      gAAAAAAACCAGCCTTTGGGGAGGCTGGCTAAATCa            <  1:1424511/36‑1 (MQ=255)                       aaaaaaaCCAGCCTTTGGGGATGCTGGCTAAATCAg           <  1:4904800/36‑1 (MQ=255)                        aaaagaCCAGCCTTTGGGGAGGCTGGCTAAATCAgg          <  1:5975085/36‑1 (MQ=255)                         aaaaaCCAGCCTTTGGGGAGGCTGGCTAAATTAGGa         >  1:2237664/1‑36 (MQ=255)                         aaaaaCCAGCCTTTGGGGAGGCTGGCTAAATCAGGa         >  1:634736/1‑36 (MQ=255)                          aaaaCCAGCCTTTGGGGAGGCTGGCTAAATCAggga        <  1:7349981/36‑3 (MQ=255)                          aaaaCCAGCCTTTGGGGAGGCTGGCTAAATCAGGaa        >  1:724766/1‑36 (MQ=255)                          aaaaCCAGCCTTTGGGGAGGCTGGCTAAAACAGGaa        >  1:7439237/1‑36 (MQ=255)                           aaaCCAGCCTTTGGGGAGGCTGGCTAAATCAGGaaa       <  1:7127239/36‑1 (MQ=255)                            aaCCAGCCTTTGGGGAGGCTGGCTAAATCAGGAAAt      >  1:2992153/1‑36 (MQ=255)                            aaCCAGCCTTTGGGGAGGCTGGCTAAATCAGGAAAt      >  1:987172/1‑36 (MQ=255)                             aCCAGCCTTTTGGGAGGCTGGCTAAATCAGGAAATa     >  1:3563621/1‑36 (MQ=255)                             aCCAGCCTTTGGGGAGGCTGGCTAAATCAGGAAATa     <  1:7145395/36‑1 (MQ=255)                             aCCAGCCTTTGGGGAGGCTGGCTAAATCAGGAAATa     <  1:7153502/36‑1 (MQ=255)                              ccAGCCTTTGGGGAGGCTGGCTAAATCAGGAAATaa    <  1:4572982/36‑1 (MQ=255)                               cAGCCTTTGGGGAGGCTGGCTAAATCAGGAAATAAg   >  1:5784910/1‑36 (MQ=255)                               cAGCCTTTGGGGAGGCTGGCTAAATCAGGAAATAAg   >  1:450565/1‑36 (MQ=255)                               cAGCCTTTGGGGAGGCTGGCTAAATCAGGAAATAAg   >  1:4154818/1‑36 (MQ=255)                                aGCCTTTGGGGAGGCTGGCTAAATCAGGAAATAAGc  <  1:1797380/36‑1 (MQ=255)                                   |                                 CACCCGAAATGATACTTATTAGAAAAAAACCAGCCTTTGGGGAGGCTGGCTAAATCAGGAAATAAGC  >  REL606/1617599‑1617665 Base quality scores:  ATCG  < 3 ≤  ATCG  < 11 ≤  ATCG  < 19 ≤  ATCG  < 30 ≤  ATCG  < 32 ≤  ATCG