BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	REL606	= 1619531	34 (0.780)	10 (0.230)	6/56	4.1	intergenic (‑140/+77)	rem/hokD	predicted protein/small toxic polypeptide
*	?	REL606	2353399 =	35 (0.640)	10 (0.230)	6/56	4.1	coding (1545/1833 nt)	yfbS	predicted transporter
Rejected: Position hash score below cutoff.


AAACGCGTTGAAAATAAAAACAAAAACCCGCCGAAGCGGGTTAAGTGCGAGTGCGTTGAGGATGCCTGC  >  REL606/1619498‑1619566


aaaCGCGTTGAAAATAAAAACAAAAACCCGCCGAAg                                   <  1:2666468/36‑1 (MQ=255)


  aCGCGTTGAAAATAAAAACAAAAACCCGCCGAAggg                                 >  1:8712/1‑34 (MQ=255)


    gcgTTGAAAATAAAAACAAAAACCCGCCGACGCggg                               >  1:5520746/1‑36 (MQ=255)


    gcgTTGAAAATAAAAACAAAAACCCGCCGAAGCggg                               >  1:7477893/1‑36 (MQ=255)


     cgTTGAAAATAAAAACAAAAACCCGCCGAAGCGGGt                              <  1:5164569/36‑1 (MQ=255)


       aagAAAATAAAAACAAAAACCCGCCGAAGCGGGTTa                            <  1:4433569/34‑1 (MQ=255)


        tGAAAATAAAAACAAAAACCCGCCGAAGCGGGTTaa                           >  1:2885286/1‑36 (MQ=255)


        tGAAAATAAAAACAAAAACCCGCCGAAGCGGGTTaa                           <  1:1410800/36‑1 (MQ=255)


        tGAAAATAAAAACAAAAACCCCCCGAAGCGGGTTaa                           <  1:3471253/36‑1 (MQ=255)


         gAAAATAAAAACAAAAACCCGCCGAAGCGGGTTagg                          >  1:1721109/1‑34 (MQ=255)


         gAAAATAAAAACAAAAACCCGCCGAAGCGGGTTAag                          >  1:1468399/1‑36 (MQ=255)


           aaaTAAAAACAAAAACCCGCCGAAGCGGGTTAagtg                        >  1:3190498/1‑36 (MQ=255)


           aaaTAAAAACAAAAACCCGCCGAAGCGGGTTAagtg                        >  1:337831/1‑36 (MQ=255)


            aaTAAAAACAAAAACCCGCCGAAGCGGGTTTagtgc                       >  1:6872451/1‑36 (MQ=255)


            aaTAAAAACAAAAACCCGCCGAAGCGGGTTAagtgc                       >  1:3679953/1‑36 (MQ=255)


                aaaacaaaaacCCGCCGAAGCGGGTTAagtgcgagt                   >  1:2625531/1‑36 (MQ=255)


                 aaacaaaaacCCGCCGAAGCGGGTTAagtgcgagtg                  >  1:2756999/1‑36 (MQ=255)


                 aaacaaaaacCCGCCGAAGCGGGTTAagtgcgagtg                  >  1:432992/1‑36 (MQ=255)


                 aaacaaaaacCCGCCGAAGCGGGTTAagtgcgagtg                  <  1:5008653/36‑1 (MQ=255)


                   acaaaaacCCGCCGCAGCGGGTTAagtgcgagtgcg                >  1:1494299/1‑36 (MQ=255)


                   acaaaaacCCGCCGAAGCGGGTTAagtgcgagtgcg                >  1:4565247/1‑36 (MQ=255)


                   acaaaaacCCGCCGAAGCGGGTTAagtgcgagtgcg                <  1:2669558/36‑1 (MQ=255)


                      aaaacCCGCCGAAGCGGGTTAAGTGCGAGTGCGTTg             >  1:7469531/1‑36 (MQ=255)


                       aaacCCGCCGAAGCGGGTTAAGTGCGAGTGCGTTGa            <  1:565592/36‑1 (MQ=255)


                        aacCCGCCGAAGCGGGTTAAGTGCGAGTGCGTTGAg           >  1:2298014/1‑36 (MQ=255)


                         acCCGCCGAAGCGGGTTAAGTGCGAGTGCGTTGAgg          >  1:5716037/1‑36 (MQ=255)


                         acCCGCCGAAGCGGGTTAAGTGCGAGTGCGTTGAgg          <  1:6234140/36‑1 (MQ=255)


                           ccgccgAAGCGGGTTAAGTGCGAGTGCGTTGAGGAt        <  1:4579591/36‑1 (MQ=255)


                           ccgccgAAGCGGGTTAAGTGCGAGTGCGTTGAGGAt        <  1:388445/36‑1 (MQ=255)


                              ccgAAGCGGGTTAAGTGCGAGTGCGTTGAGGAtgcc     >  1:7470772/1‑36 (MQ=255)


                               cgAAGCGGGTTAAGTGCGAGTGCGTTGAGGAtgcct    >  1:4287063/1‑36 (MQ=255)


                               cgAAGCGGGTTAAGTGCGAGTGCGTTGAGGAtgcct    >  1:3900326/1‑36 (MQ=255)


                                gAAGCGGGTTAAGTGCGAGTGCGTTGAGGAtgcctg   >  1:6394620/1‑36 (MQ=255)


                                 aaGCGGGTTAAGTGCGAGTGCGTTGAGGAtgcttgc  >  1:6133213/1‑36 (MQ=255)


AAACGCGTTGAAAATAAAAACAAAAACCCGCCGAAGCGGGTTAAGTGCGAGTGCGTTGAGGATGCCTGC  >  REL606/1619498‑1619566

Base quality scores:


ATCG

< 3 ≤


ATCG

< 10 ≤


ATCG

< 22 ≤


ATCG

< 30 ≤


ATCG

< 32 ≤


ATCG