New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? REL606 = 202299950 (1.060)5 (0.110) 4/60 5.3 coding (600/1071 nt) hisC histidinol‑phosphate aminotransferase
?REL606 = 2103918 22 (0.400)coding (185/216 nt) ECB_01992 hypothetical protein
Rejected: Position hash score below cutoff.

CGCTGGCTGGCTGGCTG..............................  >  REL606/2022983‑2022999
......................CTGGCTGGCTGGCTGGCTGGCTGGC  <  REL606/2103918‑2103894
                 |||||                         
CGCTGGCTGGCTGTCTGGCTGGCTGGCTGGCTGGCT             <  1:5418423/36‑1 (MQ=0)
 ggTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTG            <  1:1744919/34‑1 (MQ=1)
    GGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT         <  1:4831516/36‑1 (MQ=1)
       TGGCTGGCTGGGTGGCTGGCTGGCTGGCTGGCTGGC      <  1:4912513/36‑1 (MQ=0)
           TGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGC  <  1:1355805/36‑1 (MQ=1)
                 |||||                         
CGCTGGCTGGCTGGCTG..............................  >  REL606/2022983‑2022999
......................CTGGCTGGCTGGCTGGCTGGCTGGC  <  REL606/2103918‑2103894

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 8 ≤  ATCG  < 23 ≤  ATCG  < 32 ≤  ATCG