This is start of a protocol to split pooled samples which have internal barcodes into individual fastq files.
- copy pooled files from corral to scratch
- gunzip files
- generate a 2 column tsv with sample name and combined R1R2 barcode with no spaces
- run the dual_inline_bc_assignment.py script from barricklab repository
- copy new .fastq files back to corral
-- Main.DanielDeatherage - 31 May 2016