New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 734239 = | 59 (0.570) | 18 (0.180) | 6/48 | NT | 29.0% | coding (1021/1284 nt) | gltA | citrate synthase |
? | REL606 | 1556579 = | 29 (0.280) | intergenic (‑104/+298) | ydeN/ydeO | hypothetical protein/predicted DNA‑binding transcriptional acfivator |
Only 100 of 128 total aligned reads displayed.
TACGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGC > REL606/734205‑734273 | tACGGGTCGTTCAGCGCGATGTTTTCCAGCTCCAt < 1:1846297/35‑1 (MQ=255) tACGGGTCGTTCAGCGCGATGTTTTCCAGCTCCAt > 1:19727771/1‑35 (MQ=255) tACGGGTCGTTCAGCGCGATGTTTTCCAGCTCCAt > 1:9072616/1‑35 (MQ=255) tACGGGTCGTTCAGCGCGATGTTTTCCAGCTCCAt < 1:2598651/35‑1 (MQ=255) tACGGGTCGTTCAGCGCGATGTTTTCCAGCTCCAt < 1:13705600/35‑1 (MQ=255) actggTCGTTCAGCGCGATGTTTTCCGGCTCCATa < 1:9020421/32‑1 (MQ=37) aCGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATa > 1:18440750/1‑35 (MQ=255) aCGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATa < 1:19140580/35‑1 (MQ=255) aCGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATa < 1:19400914/35‑1 (MQ=255) aCGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATa > 1:19596059/1‑35 (MQ=255) aCGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATa > 1:17141468/1‑35 (MQ=255) aCGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATa < 1:5937229/35‑1 (MQ=255) aCGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATa < 1:8435889/35‑1 (MQ=255) aCGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATa < 1:7567280/35‑1 (MQ=255) aCGGGTCGTTCAGCGCGATGTTTTCCAGATCCATa < 1:8715271/35‑1 (MQ=255) cGGGTCGTTCAGCTCGATGTTTTCCAGCTCCATAg > 1:14271303/1‑35 (MQ=255) cGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATAg < 1:741367/35‑1 (MQ=255) cGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATAg > 1:8686907/1‑35 (MQ=255) cGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATAg > 1:8192360/1‑35 (MQ=255) cGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATAg < 1:16860952/35‑1 (MQ=255) tcgTCGTTCAGCGCGATGTTTTCCAGCTCCATAGc < 1:6816491/33‑1 (MQ=255) gggTCGTTCAGCGCGATGTTTTCCAGCTCCATAGc < 1:14929348/35‑1 (MQ=255) gggTCGTTCAGCGCGATGTTTTCCAGCTCCATAGc < 1:15377753/35‑1 (MQ=255) ggTCGTTCAGCGCGATGTTTTCCAGCTCCATAGcc < 1:3092802/35‑1 (MQ=255) ggTCGTTCAGCGCGATGTTTTCCAGCTACATAGcc < 1:7447085/35‑1 (MQ=255) gTCGTTCAGCGCGATGTTTTCCAGCTCCATAGCCa > 1:14299828/1‑35 (MQ=255) gTCGTTCAGCGCGATGTTTTCCAGCTCCATAGCCa < 1:10224998/35‑1 (MQ=255) tCGTTCAGCGCTATGTTTTCCAGCTCCATAGCCAc > 1:12482445/1‑35 (MQ=255) cGTTCAGCGCGATGTTTTCCAGCTCCATAGCCACt > 1:16582982/1‑35 (MQ=255) cGTTCAGCGCGATGTTTTCCAGCTCCATAGCCACt > 1:8791140/1‑35 (MQ=255) cGTTCAGCGCGATGTTTTCCAGCTCCATAGCCACt > 1:4577697/1‑35 (MQ=255) gTTCAGCGCGATGTTTTCCAGCTCCATAGCCACtt > 1:11455287/1‑35 (MQ=255) ttCAGCGCGATGTTTTCCAGCTCCATAGCCACTTc > 1:19341106/1‑35 (MQ=255) ttCAGCGCGATGTTTTCCAGCTCCATAGCCACTTc > 1:19727643/1‑35 (MQ=255) ttCAGCGCGATGTTTTCCAGCTCCATAGCCACTTc > 1:7134477/1‑35 (MQ=255) ttCAGCGCGATGTTTTCCAGCTCCATAGCCACTTc > 1:3846252/1‑35 (MQ=255) ttCAGCGCGATGTTTTCCAGCTCCATAGCCACTTc > 1:6470294/1‑35 (MQ=255) tCAGCGCGATGTTTTCCAGCTCCATAGCCACTTcc > 1:6916924/1‑35 (MQ=255) ncAGCGCGATGTTTTCCAGCTCCATAGCCACTTcc > 1:2715252/2‑35 (MQ=255) cAGCGCGATGTTTTCCAGCTCCATAGCCACTTCca > 1:2013478/1‑35 (MQ=255) cAGCGCGATGTTTTCCAGCTCCATAGCCACTTCca > 1:2161886/1‑35 (MQ=255) cAGCGCGATGTTTTCCAGCTCCATAGCCACTTCca > 1:9526732/1‑35 (MQ=255) cAGCGCGATGTTTTCCAGCTCCATAGCCACTTCca > 1:11915896/1‑35 (MQ=255) aGCGCGATGTTTTCCAGCTCCATAGCCACTTCcag > 1:2250635/1‑35 (MQ=255) aGCGCGATGTTTTCCAGCTCCATAGCCACTTCcag > 1:12938629/1‑35 (MQ=255) gcgcGATGTTTTCCAGCTCCATAGCCACTTCcagc > 1:7804527/1‑35 (MQ=255) gcgcGATGTTTTCCAGCTCCATAGCCACTTCcagc > 1:5092152/1‑35 (MQ=255) cgcgATGTTTTCCAGCTCCATAGCCACTTCcagca > 1:17346402/1‑35 (MQ=255) gcgATGTTTTCCAGCTCCATAGCCACTTCcagcag > 1:10220078/1‑35 (MQ=255) gcgATGTTTTCCAGCTCCATAGCCACTTCcagcag > 1:600644/1‑35 (MQ=255) gcgATGTTTTCCAGCTCCATAGCCACTTCcagcag > 1:15276699/1‑35 (MQ=255) cgATGTTTTCCAGCTCCATAGCCACTTCCAGCAgg > 1:415502/1‑35 (MQ=255) ttttttccctttttttTAGCCACTTCCAGCAGGTc > 1:1525721‑M1/17‑35 (MQ=255) aTGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTc > 1:6956783/1‑35 (MQ=255) aTGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTc > 1:17082091/1‑35 (MQ=255) tttttccctttttttTAGCCACTTCCAGCAGGTCa > 1:8491449‑M1/16‑35 (MQ=255) tGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCa > 1:18859706/1‑35 (MQ=255) tGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCa > 1:15844802/1‑35 (MQ=255) ttttccctttttttTAGCCACTTCCAGCAGGTCAt > 1:2789605‑M1/15‑35 (MQ=255) tttccctttttttTAGCCACTTCCAGCAGGTCATc > 1:740683‑M1/14‑35 (MQ=255) tttccccttttttTAGCCACTTCCAGCAGGTCATc > 1:12733759‑M1/14‑35 (MQ=255) tttCCAGCTCCATAGCCACTTCCAGCAGGTCATcc > 1:11911118/1‑35 (MQ=255) ttCCAGCTCCATAGCCACTTCCAGCAGGTCATCCt > 1:7495853/1‑35 (MQ=255) tcctctttttTAGCCACTTCCAGCAGGTCATCCtt > 1:912370‑M1/11‑35 (MQ=255) tCCAGCTCCATAGCCACTTCCAGCAGGTCATCCtt > 1:17270955/1‑35 (MQ=255) ccccttttttTAGCCACTTCCAGCAGGTCATCCtt > 1:18182106‑M1/11‑35 (MQ=255) ttttttttTAGCCACTTCCAGCAGGTCATCCTTCg > 1:9095395‑M1/9‑35 (MQ=255) ctttttttTAGCCACTTCCAGCAGGTCATCCTTCg > 1:17533132‑M1/9‑35 (MQ=255) cAGCTCCATAGCCACTTCTAGCAGGTCATCCTTCg > 1:5195012/1‑35 (MQ=255) cAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCg > 1:11814012/1‑35 (MQ=255) cAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCg > 1:2897340/1‑35 (MQ=255) cAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCg > 1:18199092/1‑35 (MQ=255) tttttttTAGCCACTTCCAGCAGGTCATCCTTCGt > 1:6120905‑M1/8‑35 (MQ=255) accTCCATATCCACTTCCAGCAGGTCATCCTTCGt < 1:19232917/33‑1 (MQ=25) aGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGt > 1:13707501/1‑35 (MQ=255) ttttttTAGCCACTTCCAGCAGGTCATCCTTCGTg > 1:5806688‑M1/7‑35 (MQ=255) ttttttTAGCCACTTCCAGCAGGTCATCCTTCGTg > 1:16940476‑M1/7‑35 (MQ=255) tcttttTAGCCACTTCCAGCAGGTCATCCTTCGTg > 1:11515633‑M1/7‑35 (MQ=255) gCTCCATAGCCACTTCCAGCAGGTCATCCTTCGtt > 1:3368503/1‑34 (MQ=255) gCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTg > 1:6210456/1‑35 (MQ=255) tttttTAGCCACTTCCAGCAGGTCATCCTTCGTGc > 1:256071‑M1/6‑35 (MQ=255) cTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGc > 1:1337126/1‑35 (MQ=255) ttttTAGCCACTTCCAGCAGGTCATCCTTCGTGcc > 1:7722065‑M1/5‑35 (MQ=255) tCCATAGCCACTTCCAGCAGGTCATCCTTCGTGcc > 1:10486587/1‑35 (MQ=255) tCCATAGCCACTTCCAGCAGGTCATCCTTCGTGcc > 1:3686282/1‑35 (MQ=255) tttTAGCCACTTCCAGCAGGTCATCCTTCGTGccc > 1:14204160‑M1/4‑35 (MQ=255) ttTAGCCACTTCCAGCAGGTCATCCTTCGTGCCCa > 1:3419595‑M1/3‑35 (MQ=255) ttTAGCCACTTCCAGCAGGTCATCCTTCGTGCCCa > 1:12812535‑M1/3‑35 (MQ=255) ttTAGCCACTTCCAGCAGGTCATCCTTCGTGCCCa > 1:5725825‑M1/3‑35 (MQ=255) ttTAGCCACTTCCAGCAGGTCATCCTTCGTGCCCa > 1:16176944‑M1/3‑35 (MQ=255) cATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCa > 1:10102192/1‑35 (MQ=255) tTAGCCACTTCCAGCAGGTCATCCTTTGTGCCCAg > 1:19130757‑M1/2‑35 (MQ=255) tTAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAg > 1:4851503‑M1/2‑35 (MQ=255) tTAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAg > 1:9766914‑M1/2‑35 (MQ=255) aTAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAg > 1:11310361/1‑35 (MQ=255) tAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGc > 1:8201469/1‑35 (MQ=255) tAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGc < 1:2717557/35‑1 (MQ=255) tAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGc > 1:16391385/1‑35 (MQ=255) tAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGc > 1:11335391/1‑35 (MQ=255) tAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGc > 1:9710373/1‑35 (MQ=255) | TACGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGC > REL606/734205‑734273 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |