New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 294204 = | 76 (0.740) | 6 (0.070) | 3/38 | NT | 10.8% | intergenic (+474/‑53) | ykgD/ykgE | predicted DNA‑binding transcriptional regulator/predicted oxidoreductase |
? | REL606 | = 2574914 | 39 (0.480) | intergenic (+756/+62) | sseA/sseB | 3‑mercaptopyruvate sulfurtransferase/rhodanase‑like enzyme, sulfur transfer from thiosulfate |
Only 100 of 206 total aligned reads displayed.
AAAGAACGCCATATTAATTGATGATTGATCCCCCGGTGGGGGGGAAACATCGGGCATAAATGGGCATGA > REL606/294170‑294238 | ccacctttgctaactttgtccgcggcattggttCg < 1:13323533‑M1/2‑1 (MQ=255) ccacctttgctaactttgtccgcggcattggttCg > 1:12731800‑M1/34‑35 (MQ=255) ataataaccggagtctctccggcgacaatttactg < 1:16887462‑M1/1‑1 (MQ=255) ataataaccggagtctctccggcgacaatttactg > 1:9205534‑M1/35‑35 (MQ=255) aaaGAACGCCATATTAATTGATGATTGATCCCCCg < 1:14112681/35‑1 (MQ=255) aaaGAACGCCATATTAATTGATGATTGATCCCCCg < 1:14881420/35‑1 (MQ=255) taataaccggagtctctccggcgacaatttactgg < 1:5248395‑M1/2‑1 (MQ=255) cacctttgctaactttgtccgcggcattggttCgg > 1:14176664‑M1/33‑35 (MQ=255) cacctttgctaactttgtccgcggcattggttCgg > 1:7679221‑M1/33‑35 (MQ=255) cacctttgctaactttgtccgcggcattggttCgg < 1:2241043‑M1/3‑1 (MQ=255) cacctttgctaactttgtccgcggcattggttCgg > 1:2903152‑M1/33‑35 (MQ=255) cacctttgctaactttgtccgcggcattggttCgg > 1:2693049‑M1/33‑35 (MQ=255) atctaaccggagtctctccggcgacaatttactgg > 1:10838360‑M1/34‑35 (MQ=255) aaGAACGCCATATTAATTGATGATTGATCCCCCgg > 1:19144387/1‑35 (MQ=255) aaGAACGCCATATTAATTGATGATTGATCCCCCgg > 1:12912699/1‑35 (MQ=255) acctttgctaactttgtccgcggcattggttCGGt < 1:11247831‑M1/4‑1 (MQ=255) acctttgctaactttgtccgcggcattggttCGGt < 1:16334344‑M1/4‑1 (MQ=255) acctttgctaactttgtccgcggcattggttCGGt > 1:16588386‑M1/32‑35 (MQ=255) aataaccggagtctctccggcgacaatttactggt < 1:4752067‑M1/3‑1 (MQ=255) aataaccggagtctctccggcgacaatttactggt < 1:14252286‑M1/3‑1 (MQ=255) aGAACGCCATATTAATTGATGATTGATCCCCCGGt > 1:17922348/1‑35 (MQ=255) gAACGCCATATTAATTGATGATTGATCCCCCGGTg > 1:5298790/1‑35 (MQ=255) cctttgctaactttgtccgcggcattggttCGGTg > 1:11707909‑M1/31‑35 (MQ=255) cctttgctaactttgtccgcggcattggttCGGTg > 1:15689662‑M1/31‑35 (MQ=255) cctttgctaactttgtccgcggcattggttCGGTg > 1:18243061‑M1/31‑35 (MQ=255) ataaccggagtctctccggcgacaatttactggtg > 1:3449838‑M1/32‑35 (MQ=255) ctttgctaactttgtccgcggcattggttCGGTgg < 1:9129269‑M1/6‑1 (MQ=255) ctttgctaactttgtccgcggcattggttCGGTgg < 1:16255440‑M1/6‑1 (MQ=255) ctttgctaactttgtccgcggcattggttCGGTgg > 1:8767018‑M1/30‑35 (MQ=255) ctttgctaactttgtccgcggcattggttCGGTgg > 1:13491285‑M1/30‑35 (MQ=255) ctttgctaactttgtccgcggcattggttCGGTgg > 1:2491644‑M1/30‑35 (MQ=255) aaCGCCATATTAATTGATGATTGATCCCCCGGTgg < 1:11781975/35‑1 (MQ=255) tttgctaactttgtccgcggcattggttCGGTggg < 1:13817666‑M1/7‑1 (MQ=255) tttgctaactttgtccgcggcattggttCGGTggg < 1:17265318‑M1/7‑1 (MQ=255) tttgctaactttgtccgcggcattggttCGGGggg < 1:8393756‑M1/7‑1 (MQ=255) aaccggagtctctccggcgacaatttactGGTggg < 1:15218677‑M1/6‑1 (MQ=255) aCGCCATATTAATTGATGATTGATCCCCCGGTggg < 1:6501346/35‑1 (MQ=255) aCGCCATATTAATTGATGATTGATCCCCCGGTggg < 1:8148488/35‑1 (MQ=255) ttgctaactttgtccgcggcattggttCGGTgggg < 1:19400643‑M1/8‑1 (MQ=255) cGCCATATTAATTGATGATTGATCCCCCGGTgggg > 1:6005637/1‑35 (MQ=255) accggagtctctccggcgacaatttactGGTgggg < 1:12226152‑M1/7‑1 (MQ=255) tgctaactttgtccgcggcattggttCGGTggggg < 1:844556‑M1/9‑1 (MQ=255) gCCATATTAATTGATGATTGATCCCCCGGTggggg > 1:2396582/1‑35 (MQ=255) ccggagtctctccggcgacaatttactGGTggggg < 1:652926‑M1/8‑1 (MQ=255) ccATATTAATTGATGATTGATCCCCCGGTgggggg > 1:4864808/1‑35 (MQ=255) ggagtctctccggcgacaatttactGGtgggggga < 1:16044502‑M1/10‑2 (MQ=255) ctaactttgtccgcggcattggttCGGtggggggt < 1:11470925‑M1/11‑2 (MQ=255) cATATTAATTGATGATTGATCCCCCGGTggggggg > 1:12019805/1‑35 (MQ=255) cATATTAATTGATGATTGATCCCCCGGTggggggg > 1:20047440/1‑35 (MQ=255) cATATTAATTGATGATTGATCCCCCGGTggggggg > 1:9188637/1‑35 (MQ=255) taactttgtccgcggcattggttCGgtggggggaa < 1:8068942‑M1/12‑3 (MQ=255) taactttgtccgcggcattggttCGGTGGGGGGGa < 1:796267‑M1/12‑1 (MQ=255) gagtctctccggcgacaatttactggtgggggaga < 1:9563628‑M1/11‑4 (MQ=255) atatTAATTGATGATTGATCCCCCGGTGGGTGGGa > 1:18726621/1‑35 (MQ=255) atatTAATTGATGATTGATCCCCCGGTGGGGGGGa < 1:2562852/35‑1 (MQ=255) atatTAATTGATGATTGATCCCCCGGTGGGGGGGa > 1:2670655/1‑35 (MQ=255) ngtctctccggcgacaatttactggtggggggaga < 1:10611803‑M1/12‑4 (MQ=255) aactttgtccgcggcattggttCggtggggggcaa < 1:18876735‑M1/13‑4 (MQ=255) aactttgtccgcggcattggttCGGTGGGGGGGaa < 1:6133603‑M1/13‑1 (MQ=255) aactttgtccgcggcattggttCGGTGGGGGGGaa < 1:11009195‑M1/13‑1 (MQ=255) atTAATTGATGATTGATCCCCCGGTGGGGGGGaaa > 1:20176347/1‑35 (MQ=255) actttgtccgcggcattggttCGGTGGGGGGgaat < 1:3143252‑M1/14‑2 (MQ=255) ttAATTGATGATTGATCCCCCGGTGGGGGGGAAAc > 1:4156973/1‑35 (MQ=255) tctctccggcgacaatttactGGTGGGGGGcaaaa < 1:9226844‑M1/14‑2 (MQ=255) tAATTGATGATTGATCCCCCGGTGGGGGGGAAACa > 1:14051302/1‑35 (MQ=255) tAATTGATGATTGATCCCCCGGTGGGGGGGAAACa < 1:5487192/35‑1 (MQ=255) ctctccggcgacaatttactGGTGGGGGGGAAACa < 1:2815950‑M1/15‑1 (MQ=255) aTTGATGATTGATCCCCCGGTGGGGGGGAAACATc > 1:12345295/1‑35 (MQ=255) aTTGATGATTGATCCCCCGGTGGGGGGGAAACATc < 1:6782841/35‑1 (MQ=255) aTTGATGATTGATCCCCCGGTGGGGGGGAAACATc > 1:14271099/1‑35 (MQ=255) ttGATGATTGATCCCCCGGTGGGGGGGAAACATCg > 1:16545857/1‑35 (MQ=255) ttGATGATTGATCCCCCGGTGGGGGGGAAACATCg < 1:12579987/35‑1 (MQ=255) ttGATGATTGATCCCCCGGTGGGGGGGAAACATCg > 1:13569046/1‑35 (MQ=255) ttGATGATTGATCCCCCGGTGGGGGGGAAACATCg < 1:5218778/35‑1 (MQ=255) ttGATGATTGATCCCCCGGTGGGGGGGAAACATCg > 1:6587349/1‑35 (MQ=255) ttGATGATTGATCCCACGGTGGGGGGGAAACATCg < 1:12081910/35‑1 (MQ=255) gatgatTGATCCCCCGGTGGGGGGGAAACATCggg < 1:210399/35‑1 (MQ=255) atgatTGACCCCCCGGTGGGGGGGAAACATCGGGc < 1:6709901/35‑1 (MQ=255) tgattgatCCCCCGGTGGGGGGGAAACATCGGGCa > 1:14605882/1‑35 (MQ=255) gattgatCCCCCGGTGGGGGGGAAACATCGGGCAt > 1:15835455/1‑35 (MQ=255) gattgatCCCCCGGTGGGGGGGAAACATCGGGCAt < 1:6909270/35‑1 (MQ=255) attgatCCCCCGGTGGGGGGGAAACATCGGGCATa < 1:3561422/35‑1 (MQ=255) attgatCCCCCCGTGGGGGGGAAACATCGGGCATa > 1:5387416/1‑35 (MQ=255) ttgatCCCCCGGTGGGGGGGAAACATCGGGCATaa > 1:9173329/1‑35 (MQ=255) tgatCCCCCGGTGGGGGGGAAACATCGGGCATaaa > 1:4278782/1‑35 (MQ=255) gatCCCCCGGTGGGGTGGAAACATCGGGCATAAAt > 1:17061227/1‑35 (MQ=255) tCCCCCGGTGGTGGGGAAACATCGGGCATAAATgg > 1:7135123/1‑35 (MQ=255) tCCCCCGGTGGGGGGGAAACATCGGGCATAAATgg < 1:17715432/35‑1 (MQ=255) cccccGGTGGGGGGGAAACATCGGGCATAAATggg > 1:18644054/1‑35 (MQ=255) ccccGGTGGGGGGGAAACATCGGGCATAAATGGGc > 1:12255196/1‑35 (MQ=255) cccGGTGGGGGGGAAACATCGGGCATAAATGGGCa > 1:4633642/1‑35 (MQ=255) ccGGTGGGGTGGAAACATCGGGCATAAATGGGCAt < 1:19358130/35‑1 (MQ=255) CGGTGGGGGGGAAACATCGGGCATAAATGGGCATg < 1:13957612‑M1/35‑1 (MQ=255) CGGTGGGGGGGAAACATCGGGCATAAATGGGCATg < 1:11533299‑M1/35‑1 (MQ=255) GGTGGGGGGGAAACATCGGGCATAAATGGGCATGa > 1:7555802‑M1/1‑35 (MQ=255) GGTGGGGGGGAAACATCGGGCATAAATGGGCATGa < 1:2539451‑M1/35‑1 (MQ=255) GGTGGGGGGGAAACATCGGGCATAAATGGGCATGa > 1:1697024‑M1/1‑35 (MQ=255) GGTGGGGGGGAAACATCGGGCATAAATGGGCATGa > 1:1370730‑M1/1‑35 (MQ=255) GGTGGGGGGGAAACATCGGGCATAAATGGGCATGa < 1:12100844‑M1/35‑1 (MQ=255) GGTGGGGGGGAAACATCGGGCATAAATGGGCATGa > 1:10117112‑M1/1‑35 (MQ=255) | AAAGAACGCCATATTAATTGATGATTGATCCCCCGGTGGGGGGGAAACATCGGGCATAAATGGGCATGA > REL606/294170‑294238 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |