Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 1,462,320 | IS150 (–) +3 bp | 90.4% | intergenic (‑82/‑257) | mokB ← / → trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 664688 = | NA (NA) | 66 (0.700) | 36/44 | NT | 89.1% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 1462320 = | 7 (0.090) | intergenic (‑82/‑259) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor | |||||
* | ? | REL606 | = 666130 | NA (NA) | 66 (0.640) | 36/48 | NT | 89.2% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 1462322 | 7 (0.080) | intergenic (‑84/‑257) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
Only 100 of 238 total aligned reads displayed.
TGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGG > REL606/1462286‑1462354 | ccatttcatcgtccaacaaaatgggtgcagtacag < 1:584777‑M2/1‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacag < 1:10345599‑M2/1‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacag > 1:19122176‑M2/35‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacag > 1:17802488‑M2/35‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacagg < 1:14739516‑M2/2‑1 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacagg < 1:15085816‑M2/2‑1 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacagg > 1:19822180‑M2/34‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacagg > 1:5148817‑M2/34‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacagg > 1:19692104‑M2/34‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacagg > 1:7081962‑M2/34‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacagg > 1:12543300‑M2/34‑35 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacagcg > 1:6035731‑M2/33‑33 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacagcg < 1:18042226‑M2/3‑3 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacagat > 1:17514467‑M2/33‑33 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaGGc > 1:14497324‑M2/33‑35 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaGGc > 1:526751‑M2/33‑35 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaGGc > 1:16241921‑M2/33‑35 (MQ=255) aTTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGc > 1:2463775/1‑35 (MQ=255) tttcatagtccaacaaaatgggtgcagtacaGGCa < 1:13543637‑M2/4‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaGGCAc < 1:2198984‑M2/5‑1 (MQ=255) tCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtg < 1:9499400‑M2/35‑3 (MQ=255) tCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtg < 1:14278990‑M2/35‑3 (MQ=255) cccGTTTAGCCTGAAAACAGAAAGTCTCAGGCAcc < 1:10241519/35‑1 (MQ=255) cccGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgt > 1:1576143‑M2/1‑32 (MQ=255) cccGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgt > 1:16783535‑M2/1‑32 (MQ=255) cccGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgt < 1:3527717‑M2/35‑4 (MQ=255) ccGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgta > 1:13659137‑M2/1‑31 (MQ=255) ccGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgta > 1:1151050‑M2/1‑31 (MQ=255) catcgtccaacaaaatgggtgcagttcaGGCAccc < 1:6664886‑M2/7‑1 (MQ=255) catcgtccaacaaaatgggtgcagtacaGGCAccc < 1:2525105‑M2/7‑1 (MQ=255) atcgtcgaacaaaatgggtgcagtacaGGCACCCg < 1:14604274‑M2/8‑1 (MQ=255) atcgtccaacaaaatgggtgcagtacaGGCACCCg < 1:15268143‑M2/8‑1 (MQ=255) tcgtccaacaaaatgggtgcagtacaGGCACCCGc > 1:1237689‑M2/27‑35 (MQ=255) tcgtccaacaaaatgggtgcagtacaGGCACCCGc < 1:19731984‑M2/9‑1 (MQ=255) ggTTAGCCTGAAAACAGAAAGTCTCAGGCtgtaat < 1:15965247‑M2/35‑7 (MQ=255) ggTTAGCCTGAAAACAGAAAGTCTCAGGCtggact < 1:18869807‑M2/35‑7 (MQ=255) ggTTAGCCTGAAAACAGAAAGTCTCAGGCtggact < 1:2870121‑M2/35‑7 (MQ=255) gTTAGCCTGAAAACAGAAAGTCTCAGGCtggactg < 1:9088450‑M2/35‑8 (MQ=255) cgtccaacaaaatgggtgcagtacaGGCACCCGCa < 1:5047936‑M2/10‑1 (MQ=255) gtccaacaaaatgggtgcagtacaGGCACCCGCAg > 1:176300‑M2/25‑35 (MQ=255) gtccaacaaaatgggtgcagtacaGGCACCCGCAg > 1:13022892‑M2/25‑35 (MQ=255) tccaacaaaatgggtgcagtacaGGCACCCGCAgg < 1:3150201‑M2/12‑1 (MQ=255) tAGCCTGAAAACAGAAAGTCTCAGGCtgtactgac > 1:4809770‑M2/1‑26 (MQ=255) tAGCCTAAAAACAGAAAGTCTCAGGCtgtactgac > 1:512217‑M2/1‑26 (MQ=255) ccaacaaaatgggtgcagtacaGGCACCCGCAGGc > 1:11395936‑M2/23‑35 (MQ=255) gCCTGAAAACAGAAAGTCTCAGGCtgtactgaccc > 1:1582814‑M2/1‑24 (MQ=255) gCCTGAAAACAGAAAGTCTCAGGCtgtactgaccc > 1:15212178‑M2/1‑24 (MQ=255) caacaaaatgggtgcagtacaGGCACCCGCAGGCa > 1:17387310‑M2/22‑35 (MQ=255) ccTGAAAACAGAAAGTCTCAGGCtgtactgacccc < 1:7989826‑M2/35‑13 (MQ=255) cTGAAAACAGAAAGTCTCAGGCtgtactgacccca < 1:8587080‑M2/35‑14 (MQ=255) cTGAAAACAGAAAGTCTCAGGCtggactgacccca < 1:10586241‑M2/35‑14 (MQ=255) acaaaatgggtgcagtacaGGCACCCGCAGGCATc < 1:3568065‑M2/16‑1 (MQ=255) acaaaatgggtgcagtacaGGCACCCGCAGGCATc > 1:913197‑M2/20‑35 (MQ=255) acaaaatgggtgcagtacaGGCACCCGCAGGCATc < 1:2629097‑M2/16‑1 (MQ=255) acaaaatgggtgcagtacaGGCACCCGCAGGCATc > 1:17567007‑M2/20‑35 (MQ=255) acaaaatgggtgcagtacaGGCACCAGCAGGCATc < 1:20131869‑M2/16‑1 (MQ=255) tGAAAACAGAAAGTCTCAGGCtgtactgaccccaa > 1:20447827‑M2/1‑21 (MQ=255) caaaatgggtgcagtacaGGCACCCGCAGGCATcc < 1:11239397‑M2/17‑1 (MQ=255) gAAAACAGAAAGTCTCAGGCtgtactgaccccaaa > 1:7584787‑M2/1‑20 (MQ=255) gAAAACAGAAAGTCTCAGGCtgtactgaccccaaa < 1:4007113‑M2/35‑16 (MQ=255) aaaatgggtgcagtacaGGCACCCGCAGGCATCCt < 1:7394245‑M2/18‑1 (MQ=255) aaaatgggtgcagtacaGGCACCCGCAGGCATCCt < 1:4229211‑M2/18‑1 (MQ=255) aaaatgggtgcagtacaGGCACCCGCAGGCATCCt > 1:9805231‑M2/18‑35 (MQ=255) aaaatgggtgcagtacaGGCACCCGCAGGCATCCt > 1:11882041‑M2/18‑35 (MQ=255) aaatgggtgcagtacaGGCACCCGCAGGCATCCTa > 1:7459830‑M2/17‑35 (MQ=255) aaaCAGAAAGTCTCAGGCtgtactgaccccaaaaa > 1:18420636‑M2/1‑18 (MQ=255) aaaCAGAAAGTCTCAGGCtgtactgaccccaaaaa > 1:7034549‑M2/1‑18 (MQ=255) aaaCAGAAAGTCTCAGGCtgtactgaccccaaaaa > 1:15740983‑M2/1‑18 (MQ=255) aaCAGAAAGTCTCAGGCtgtactgaccccaaaaag > 1:4304577‑M2/1‑17 (MQ=255) aaCAGAAAGTCTCAGGCtgtactgacccaaaaaag > 1:1900911‑M2/1‑17 (MQ=255) tgggtgcagtacaGGCACCCGCAGGCATCCTATGa > 1:12744485‑M2/14‑35 (MQ=255) gggtgcagtacaGGCCCCCGCAGGCATCCTATGAg < 1:815503‑M2/23‑1 (MQ=255) cAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAg < 1:2734257/35‑1 (MQ=255) ggtgcagtacaGGCACCCGCAGGCATCCTATGAgg < 1:10038697‑M2/24‑1 (MQ=255) ggtgcagtacaGGCACCCGCAGGCATCCTATGAgg > 1:3040985‑M2/12‑35 (MQ=255) gtgcagtacaGGCACCCGCAGGCATCCTATGAGGt < 1:16600723‑M2/25‑1 (MQ=255) gAAAGTCTCAGGCtgtactgaccccaaaaagttgg > 1:18254823‑M2/1‑13 (MQ=255) aaaGTCTCAGGCtgtactgaccccaaaaagttgga > 1:1089536‑M2/1‑12 (MQ=255) gcagtacaGGCACCCGCAGGCATCCTATGAGGttt > 1:5823123‑M2/9‑35 (MQ=255) aGTCTCAGGCtgtactgaccccaaaaagttggaca < 1:19517273‑M2/35‑26 (MQ=255) gTCTCAGGCtgtactgaccccaaaaagttggacag > 1:17137129‑M2/1‑9 (MQ=255) gTCTCAGGCtgtactgaccccaaaaagttggacag > 1:4622464‑M2/1‑9 (MQ=255) agtacaGGCACCCGCAGGCATCCTATGAGGTTTcc > 1:12093406‑M2/7‑35 (MQ=255) tctcAGGCtgtactgaccccaaaaagttggacagt > 1:16114634‑M2/1‑8 (MQ=255) gtacaGGCCCCCGCAGGCATCCTATGAGGTTTCCt < 1:8354529‑M2/30‑1 (MQ=255) gtacaGGCACCCGCAGGCATCCTATGAGGTTTCCt < 1:13678876‑M2/30‑1 (MQ=255) gtacaGGCACCCGCAGGCATCCTATGAGGTTTCCt < 1:11663071‑M2/30‑1 (MQ=255) tacaGGCACCCGCAGGCATCCTATGAGGTTTCCtt < 1:10430288‑M2/31‑1 (MQ=255) tacaGGCACCCGCAGGCATCCTATGAGGTTTCCtt < 1:6308772‑M2/31‑1 (MQ=255) tacaGGCACCCGCAGGCATCCTATGAGGTTTCCtt > 1:1935356‑M2/5‑35 (MQ=255) tacaGGCACCCGCAGGCATCCTATGAGGTTTCCtt < 1:5612291‑M2/31‑1 (MQ=255) ctcAGGCtgtactgaccccaaaaagttggacagtt > 1:8950097‑M2/1‑7 (MQ=255) tcAGGCtgtactgaccccaaaaagttggacagtta > 1:8012463‑M2/1‑6 (MQ=255) acaGGCACCCGCAGGCATCCTATGAGGTTTCCTTa < 1:11935460‑M2/32‑1 (MQ=255) acaGGCACCCGCAGGCATCCTATGAGGTTTCATTa < 1:4731506‑M2/32‑1 (MQ=255) caGGCACCCGCAGGCATCCTATGAGGTTTCCTTAg < 1:17001939‑M2/33‑1 (MQ=255) cAGGCtgtactgaccccaaaaagttggacagttaa < 1:6902482‑M2/35‑31 (MQ=255) aGGCACCCGCAGGCATCCTATGAGGTTTCCTTAgg < 1:14358239‑M2/34‑1 (MQ=255) ggCACCCGCAGGCATCCTATGAGGTTTCCTTAggg < 1:11010610/35‑1 (MQ=255) ggCACCCGCAGGCATCCTATGAGGTTTCCTTAggg < 1:1296318/35‑1 (MQ=255) | TGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGG > REL606/1462286‑1462354 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |