Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 2,122,426 | IS150 (–) +3 bp | 46.2% | coding (198‑200/216 nt) | ECB_02013 ← | conserved hypothetical protein; putative exported protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2122426 = | 47 (0.520) | 48 (0.470) | 32/48 | NT | 47.2% | coding (200/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein |
? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 2122428 | 46 (0.540) | 32 (0.320) | 21/46 | NT | 37.7% | coding (198/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein |
? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 104 total aligned reads displayed.
TGCATAAAAAAATAAGCCCGTGTAAGGGATATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2122459‑2122426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGG < REL606/2775877‑2775844 TGCATAAAAAAATAAGCCCGTGTAAGGGATATTTT > 1:17146471/1‑35 GCATAAAAAAATAAGCCCGTGTAAGGGATATTTTG < 1:19370217/35‑1 CATAAAAAAATAAGCCCGTGTAAGGGATATTTTGT > 1:8571156/1‑35 CATAAAAAAATAAGCCCGTGTAAGGGATATTTTGT < 1:2530114/35‑1 CATAAAAAAATAAGCCCGTGTAAGGGATATTTTGT > 1:5415087/1‑35 ATAAAAAAATAAGCCCGTGTAAGGGATATTTTGTA < 1:2038723/35‑1 ATAAAAAAATAAGCCCGTGTAAGGGATATTTTGTA < 1:7331156/35‑1 TAAAAAAATAAGCCCGTGTAAGGGATATTTTGTAC < 1:19782025/35‑1 TAAAAAAATAAGCCCGTGTAAGGGATATTTTGTAC < 1:12191812/35‑1 AAAAAAATAAGCCCGTGTAAGGGATATTTTGTACT < 1:10829087/35‑1 AAAAAAATAAGCCCGTGTAAGGGATATTTTGTACT < 1:3841350/35‑1 AAAAAATAAGCCCGTGTAAGGGATATTTTGTACTG < 1:256627/35‑1 AAAAATAAGCCCGTGTAAGGGATATTTTGTACTGC < 1:19115386/35‑1 AAAAATAAGCCCGTGTAAGGGATATTTTGTACTGC > 1:15954482/1‑35 AAAAATAAGCCCGTGTAAGGGATATTTTGTACTGC < 1:13431634/35‑1 AAAAATAAGCCCGTGTAAGGGATATTTTGTACTGC > 1:10121850/1‑35 AAAATAAGCCCGTGTAAGGGATATTTTGTACTGCA > 1:12128975/1‑35 AAAATAAGCCCGTGTAAGGGATATTTTGTACTGCA < 1:15873634/35‑1 AAATAAGCCCGTGTAAGGGATATTTTGTACTGCAC > 1:131535/1‑35 AAATAAGCCCGTGTAAGGGATATTTTGTACTGCAC < 1:3732648/35‑1 AAATAAGCCCGTGTAAGGGATATTTTGTACTGCAC < 1:15274977/35‑1 AAATAAGCCCGTGTAAGGGATATTTTGTACTGCAC < 1:18307470/35‑1 AATAAGCCCGTGTAAGGGATATTTTGTACTGCACC < 1:14204875/35‑1 ATAAGCCCGTGTAAGGGATATTTTGTACTGCACCC < 1:9238744/35‑1 ATAAGCCCGTGTAAGGGATATTTTGTACTGCACCC > 1:8132944/1‑35 ATAAGCCCGTGTAAGGGATATTTTGTACTGCACCC < 1:7800319/35‑1 ATAAGCCCGTGTAAGGGATATTTTGTACTGCACCC < 1:3126793/35‑1 TAAGCCCGTGTAAGGGATATTTTGTACTGCACCCA > 1:20238126/1‑35 TAAGCCCGTGTAAGGGATATTTTGTACTGCACCCA > 1:8599023/1‑35 TAAGCCCGTGTAAGGGATATTTTGTACTGCACCCA > 1:13003551/1‑35 TAAGCCCGTGTAAGGGATATTTTGTACTGCACCCA > 1:3757594/1‑35 AAGCCCGTGTAAGGGATATTTTGTACTGCACCCAT < 1:3301895/35‑1 AAGCCCGTGTAAGGGATATTTTGTACTGCACCCAT > 1:8665799/1‑35 AGCCCGTGTAAGGGATATTTTGTACTGCACCCATT > 1:5495212/1‑35 AGCCCGTGTAAGGGATATTTTGTACTGCACCCATT < 1:12166102/35‑1 CCCGTGTAAGGGATATTTTGTACTGCACCCATTTT > 1:6991668/1‑35 CCCGTGTAAGGGATATTTTGTACTGCACCCATTTT < 1:5485625/35‑1 CCGTGTAAGGGATATTTTGTACTGCACCCATTTTG > 1:20556830/1‑35 CGTGTAAGGGGTATTTTGTACTGCACCCATTTTGT > 1:9599123/1‑35 CGTGTAAGGGATATTTTGTACTGCACTCATTTTGT < 1:2771609/35‑1 CGTGTAAGGGATATTTTGTACTGCACCCATTTTGT < 1:5231344/35‑1 CGTGTAAGGGATATTTTGTACTGCACCCATTTTGT > 1:5387713/1‑35 CGTGTAAGGGATATTTTGTACTGCACCCATTTTGT < 1:6613535/35‑1 GTGTAAGGGATATTTTGTACTGCACCCATTTTGTT > 1:18627185/1‑35 GTGTAAGGGATATTTTGTACTGCACCCATTTTGTT > 1:13903239/1‑35 TGTAAGGGATATTTTGTACTGCACCCATTTTGTTG > 1:5645837/1‑35 TAAGGGATATTTTGTACTGCACCCATTTTGTTGGA > 1:1707970/1‑35 TAAGGGATATTTTGTACTGCACCCATTTTGTTGGA < 1:11343143/35‑1 AAGGGATATTTTGTACTGCACCCATTTTGTTGGAC > 1:3620244/1‑35 AGGGATATTTTGTACTGCACCCATTTTTTTGGACG > 1:18353084/1‑35 AGGGATATTTTGTACTGCACCCATTTTGTTGGACG > 1:4595473/1‑35 GGGATATTTTGTACTGCACCCATTTTGTTGGACGA > 1:3099599/1‑35 GATATTTTGTACTGCACCCATTTTGTTGGACGATG < 1:10396351/35‑1 ATATTTTGTACTGCACCCATTTTGTTGGACGATGA > 1:5725202/1‑35 ATATTTTGTACTGCACCCATTTTGTTGGACGATGA > 1:8071808/1‑35 cacTTGTACTGCACCCATTTTGTTGGACGATGAAA < 1:11956294/32‑1 cacTTGTACTGCACCCATTTTGTTGGACGATGAAA > 1:14357348/4‑35 cacTTGTACTGCACCCATTTTGTTGGACGATGAAA < 1:20444139/32‑1 ATTTTGTACTGCACCCATTTTGTTGGACGATGAAA > 1:184065/1‑35 TTTTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:16426135/35‑1 TTTTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:2540407/35‑1 TTTTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:8538996/35‑1 TTTTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:8175373/35‑1 TTTGTACTGCACCCATTTTGTTGGACGATGAAATG > 1:6579365/1‑35 TTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:7576231/35‑1 TTTGTACTGCACCCATTTTGTTGGACGATGAAATG > 1:11805205/1‑35 TTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:11499761/35‑1 TTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:5037367/35‑1 TTTGTACTGCACCCATTTTGTTGGACGATGAAATG > 1:3719702/1‑35 TTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:18702934/35‑1 TTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:19212099/35‑1 TTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:20218412/35‑1 TTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:16623817/35‑1 TTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:18255585/35‑1 TTTGTACTGCACCCATTTTGTTGGACGATGAAATG > 1:18223986/1‑35 TTTGTACTGCACCCATTTTGTTGGAAGATGAAATG < 1:1241813/35‑1 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:10034006/35‑1 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:9554216/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:10373817/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:9137140/35‑1 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:8561100/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:9081863/35‑1 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:8987886/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:8577451/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:11285063/35‑1 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:8847715/35‑1 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:6977819/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:6614098/35‑1 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:6329413/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:12499555/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:12863753/35‑1 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:5362827/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:13161910/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:16159723/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:3228716/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:2430416/35‑1 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:18488119/1‑35 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:18500081/35‑1 TTGTACTGCACACATTTTGTTGGACGATGAAATGG < 1:16948365/35‑1 TTGTACCGCACCCATTTTGTTGGACGATGAAATGG > 1:12573756/1‑35 TGCATAAAAAAATAAGCCCGTGTAAGGGATATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2122459‑2122426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGG < REL606/2775877‑2775844 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |