New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 422594 = | 77 (0.750) | 21 (0.230) | 4/42 | NT | 25.6% | intergenic (‑281/+181) | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
? | REL606 | 2573117 = | 55 (0.610) | intergenic (‑11/‑196) | yfhM/sseA | hypothetical protein/3‑mercaptopyruvate sulfurtransferase |
Only 100 of 137 total aligned reads displayed.
GGCGGCTACGCGTAACTTTTTCATTTTTCATCCCTGCCACAATGGCCCGTTAGCAACGTCGAATAATTA > REL606/2573083‑2573151 | ggcggcTACGCGTAACTTTTTCATTTTTCATCCCt < 1:15274487/35‑1 (MQ=255) ggcggcTACGCGTAACTTTTTCATTTTTCATCCCt < 1:8270044/35‑1 (MQ=255) ggcggcTACGCGTAACTGTTTCATTTTTCATCACt < 1:11862909/35‑1 (MQ=38) gcggcTACGCGTAACTTTTTCATTTTTCATCCCTg < 1:17149267/35‑1 (MQ=255) gcggcTACGCGTAACTTTTTCATTTTTCATCCCTg < 1:12571778/35‑1 (MQ=255) cggcTACGCGTAACTTTTTCATTTTTCATCCCTGc > 1:16470582/1‑35 (MQ=255) cggcTACGCGTAACTTTTTCATTTTTCATCCCTGc > 1:20562306/1‑35 (MQ=255) cggcTACGCGTAACTTTTTCATTTTTCATCCCTGc < 1:13443791/35‑1 (MQ=255) ggcTACGCGTAACTTTTTCATTTTTCATCCCTGcc > 1:2480567/1‑35 (MQ=255) ggcTACGCGTAACTTTTTCATTTTTCATCCCTGcc > 1:6572632/1‑35 (MQ=255) ggcTACGCGTAACTTTTTCATTTTTCATCCCTGcc < 1:12973451/35‑1 (MQ=255) ggcTACGCGTAACTTTTTCATTTTTCATCCCTGcc > 1:17170246/1‑35 (MQ=255) ggcTACGCGTAACTTTTTCATTTTTCATCCCTGcc > 1:18126341/1‑35 (MQ=255) gcTACGCGTAACTTTTTCATTTTTCATCCCTGCca < 1:8130315/35‑1 (MQ=255) gcTACGCGTAACTTTTTCATTTTTCATCCCTGCca > 1:11587543/1‑35 (MQ=255) gcTACGCGTAACTTTTTCATTTTTCATCCCTGCca < 1:16648766/35‑1 (MQ=255) cTACGCGTAACTTTTTCATTTTTCATCCCTGCcac > 1:17601655/1‑35 (MQ=255) tACGCGTAACTTTTTCATTTTTCATCCCTGCcaca > 1:13911893/1‑35 (MQ=255) tACGCGTAACTTTTTCATTTTTCATCCCTGCcaca > 1:16407185/1‑35 (MQ=255) tACGCGTAACTTTTTCATTTTTCATCCCTGCcaca > 1:6339138/1‑35 (MQ=255) aCGCGTAACTTTTTCATTTTTCATCCCTGCCACaa > 1:7401201/1‑35 (MQ=255) aCGCGTAACTTTTTCATTCTTCATCCCTGCcacac > 1:9824793/1‑34 (MQ=255) cgcgTAACTTTTTCATTTTTCATCCCTGCCACAAt > 1:4516071/1‑35 (MQ=255) gcgTAACTTTTTCATTTTTCATCCCTGCCACAATg > 1:19782554/1‑35 (MQ=255) gcgTAACTTTTTCATTTTTCATCCCTGCCACAATg > 1:15640725/1‑35 (MQ=255) cgTAACTTTTTCATTTTTCATCCCTGCCACAATgg > 1:9089902/1‑35 (MQ=255) cgTAACTTTTTCATTTTTCATCCCTGCCACAATgg > 1:11267142/1‑35 (MQ=255) tAACTTTTTCATTTTTCATCCCTGCCACAATGGcc > 1:5511032/1‑35 (MQ=255) atcTTTTTCTTTTTCCCCCCCTGCCACAATGGccc < 1:10482939/33‑1 (MQ=12) aaCTTTTTCATTTTTCATCCCTGCCACAATGGccc > 1:2446588/1‑35 (MQ=255) aaCTTTTTCATTTTTCATCCCTGCCACAATGGccc > 1:11850589/1‑35 (MQ=255) aaCTTTTTCATTTTTCATCCCTGCCACAATGGccc > 1:14580801/1‑35 (MQ=255) aaCTTTTTCATTTTTCATCCCTGCCACAATGGccc > 1:18198358/1‑35 (MQ=255) aaCTTTTTCATTTTTCATCCCTGCCACAATGGccc > 1:10339664/1‑35 (MQ=255) tttttttcatttttccCCCCTGCCACAATGGCCCg < 1:17850539/33‑1 (MQ=25) aCTTTTTCATTTTTCATCCCTGCCACAATGGCCCg > 1:16902528/1‑35 (MQ=255) aCTTTTTCATTTTTCATCCCTGCCACAATGGCCCg > 1:2895326/1‑35 (MQ=255) aCTTTTTCATTTTTCATCCCTGCCACAATGGCCCg > 1:916373/1‑35 (MQ=255) cTTTTTCATTTTTCATCCCTGCCACAATGGCCCGt > 1:18791443/1‑35 (MQ=255) cTTTTTCATTTTTCATCCCTGCCACAATGGCCCGt > 1:16318804/1‑35 (MQ=255) cTTTTTCATTTTTCATCCCTGCCACAATGGCCCGt > 1:15050797/1‑35 (MQ=255) cTTTTTCATTTTTCATCCCTGCCACAATGGCCCGt > 1:19809010/1‑35 (MQ=255) tttttcatttttcaTCCCTGCCACAATGGCCCGtt > 1:1887315/1‑35 (MQ=255) tttttcatttttcaTCCCTGCCACAATGGCCCGtt > 1:18006530/1‑35 (MQ=255) tttttcatttttcaTCCCTGCCACAATGGCCCGtt > 1:9851575/1‑35 (MQ=255) tttttcatttttcaTCCCTGCCACAATGGCCCGtt > 1:12418209/1‑35 (MQ=255) ttttcatttttcatCCCTGCCACAATGGCCCGTTa > 1:4597261/1‑35 (MQ=255) ttttcatttttcatCCCTGCCACAATGGCCCGTTa > 1:13712492/1‑35 (MQ=255) ttttattttcccccccTGCCACAATGGCCCGTTAg < 1:5540532‑M2/19‑1 (MQ=255) tttctttttccccCCCTGCCACAATGGCCCGTTAg < 1:19415828/35‑1 (MQ=19) tttctttttccccCCCTGCCACAATGGCCCGTTAg < 1:14306222/35‑1 (MQ=19) tttattttcccccccTGCCACAATGGCCCGTTAGc < 1:2281270‑M2/20‑1 (MQ=255) ttcatttttcatCCCTGCCACAATGGCCCGTTAGc > 1:5243515/1‑35 (MQ=255) ttcattttcccccccTGCCACAATGGCCCGTTAGc < 1:13859741‑M2/20‑1 (MQ=255) ttcattttcccccccTGCCACAATGGCCCGTTAGc < 1:6866884‑M2/20‑1 (MQ=255) tctttttcccccccTGCCACAATGGCCCGTTAGCa < 1:6294266‑M2/21‑1 (MQ=255) tcatttttcatCCCTGCCACAATGGCCCGTTAGCa > 1:1766613/1‑35 (MQ=255) ctttttcccccccTGCCACAATGGCCCGTTAGCaa < 1:13615835‑M2/22‑1 (MQ=255) tttttcccccccTGCCACAATGGTCCGTTAGCAAc < 1:13895088‑M2/23‑1 (MQ=255) tttttcccccccTGCCACAATGGCCCGTTAGCAAc < 1:17456784‑M2/23‑1 (MQ=255) tttttcatCCCTGCCACAATGGCCCGTTAGCAACg > 1:6510768/1‑35 (MQ=255) tttttcatCCCTGCCACAATGGCCCGTTAGCAACg > 1:2295273/1‑35 (MQ=255) ttttccccccTGCCACAATGGCCCGTTAGCAACGt < 1:11603582‑M2/25‑1 (MQ=255) ttttcacCCCTGCCACAATGGCCCGTTAGCAACGt < 1:12602350/35‑1 (MQ=255) tttcccccccTGCCACAATGGCCCGTTAGCAACGt < 1:11643754‑M2/25‑1 (MQ=255) tttcccccccTGCCACAATGGCCCGTTAGCAACGt < 1:8911054‑M2/25‑1 (MQ=255) tttcccccccTGCCACAATGGCCCGTTAGCAACGt < 1:102746‑M2/25‑1 (MQ=255) tttcccccccTGCCACAATGGCCCGTTAGCAACGt < 1:14088975‑M2/25‑1 (MQ=255) tttcatCCCTGCCACAATGGCCCGTTAGCAACGTc > 1:13658762/1‑35 (MQ=255) ttcccccccTGCCACAATGGCCCGTTAGCAACGTc < 1:1842392‑M2/26‑1 (MQ=255) ttcccccccTGCCACAATGGCCCGTTAGCAACGTc < 1:8569826‑M2/26‑1 (MQ=255) ttcccccccTGCCACAATGGCCCGTTAGCAACGTc < 1:2438790‑M2/26‑1 (MQ=255) ttcccccccTGCCACAATGGCCCGTTAGCAACGTc < 1:13576837‑M2/26‑1 (MQ=255) ttcatCCCTGCCACAATGGCCCGTTAGCAACGTCg > 1:13307034/1‑35 (MQ=255) tccccccTGCCACAATGGCCCGTTAGCAACGTCGa < 1:4353793‑M2/28‑1 (MQ=255) tcatCCCTGCCACAATGGCCCGTTAGCAACGTCGa > 1:8572635/1‑35 (MQ=255) tcatCCCTGCCACAATGGCCCGTTAGCAACGTCGa > 1:8194764/1‑35 (MQ=255) cccccccTGCCACAATGGCCCGTTAGCAACGTCGa < 1:13066548‑M2/28‑1 (MQ=255) ccccccTGCCACAATGGCCCGTTAGCAACGTCGaa < 1:9289387‑M2/29‑1 (MQ=255) catCCCTGCCACAATGGCCCGTTATCAACGTCGaa > 1:16390679/1‑35 (MQ=255) atCCCTGCCACAATGGCCCGTTAGCAACGTCGaat > 1:17147263/1‑35 (MQ=255) atCCCTGCCACAATGGCCCGTTAGCAACGTCGaat > 1:4017999/1‑35 (MQ=255) atCCCTGCCACAATGGCCCGTTAGCAACGTCGaat > 1:17932907/1‑35 (MQ=255) accccTGCCAAAATGGCCCGTTAGCAACGTCGaat < 1:6221520‑M2/30‑1 (MQ=255) ccccTGCCACAATGGCCCGTTAGCAACGTCGaata < 1:7448511‑M2/31‑1 (MQ=255) cccTGCCACAATGGCCCGTTAGCAACGTCGaataa < 1:7852538‑M2/32‑1 (MQ=255) cccTGCCACAATGGCCCGTTAGCAACGTCGaataa > 1:11303404‑M2/4‑35 (MQ=255) cccTGCCACAATGGCCCGTTAGCAACGTCGaataa > 1:5074328‑M2/4‑35 (MQ=255) cccTGCCACAATGGCCCGTTAGCAACGTCGaataa < 1:9400693‑M2/32‑1 (MQ=255) cccTGCCACAATGGCCCGTTAGCAACGTCGaataa < 1:10997674‑M2/32‑1 (MQ=255) cccCGCCACAATGGCCCGTTAGCAACGTCGaataa < 1:9242758‑M2/32‑1 (MQ=255) ccTGCCACAATGGCCCGTTAGCAACGTCGaataat > 1:20172555‑M2/3‑35 (MQ=255) ccTGCCACAATGGCCCGTTAGCAACGTCGaataat < 1:3242126‑M2/33‑1 (MQ=255) ccTGCCACAATGGCCCGTTAGCAACGTCGaataat > 1:627511‑M2/3‑35 (MQ=255) cTGCCACAATGGCCCGTTAGCAACGTCGAATAAtt < 1:7529638‑M2/34‑1 (MQ=255) cTGCCACAATGGCCCGTTAGCAACGTCGAATAAtt > 1:225289‑M2/2‑35 (MQ=255) cTGCCACAATGGCCCGTTAGCAACGTCGAATAAtt > 1:5218254‑M2/2‑35 (MQ=255) cTGCCACAATGGCCCGTTAGCAACGTCGAATAAtt > 1:2893837‑M2/2‑35 (MQ=255) tGCCACAATGGCCCGTTAGCAACGTCGAATAatta > 1:15973779/1‑35 (MQ=255) tGCCACAATGGCCCGTTAGCAACGTCGAATAatta > 1:5772538/1‑35 (MQ=255) | GGCGGCTACGCGTAACTTTTTCATTTTTCATCCCTGCCACAATGGCCCGTTAGCAACGTCGAATAATTA > REL606/2573083‑2573151 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |