New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 76423 = | 43 (0.420) | 4 (0.050) | 3/36 | NT | 7.3% | coding (903/1611 nt) | thiP | thiamin ABC transporter membrane protein |
? | REL606 | = 3891004 | 69 (0.900) | coding (451/1497 nt) | yieN | fused predicted transcriptional regulator: sigma54 activator protein/conserved protein |
Only 100 of 106 total aligned reads displayed.
CATCGACGATCACCGCCAGCAACGGTGGCAGCAACAGCAGCAGCGCCAGCACAATTAACACCGTGTCGC > REL606/76389‑76457 | tgtctgcttccggcagctcgttggaggccgccacc > 1:13734953‑M1/35‑35 (MQ=255) tgtctgcttccggcagctcgttggaggccgccacc < 1:16165298‑M1/1‑1 (MQ=255) gtctgcttccggcagctcgttggaggccgccacca > 1:8736859‑M1/34‑35 (MQ=255) aTCGACGATCACCGCCAGCAACGGTGGCAGGAAca > 1:8623833/1‑35 (MQ=255) aTCGACGATCACCGCCAGCAACGGTGGCAGGAAca > 1:13965529/1‑35 (MQ=255) tctgcttccggcagctcgttggaggccgccaccag > 1:15556762‑M1/33‑35 (MQ=255) tctgcttccggcagctcgttggaggccgccaccag > 1:16650960‑M1/33‑35 (MQ=255) tCGACGATCACCGCCAGCAACGGTGGCAGCAAcag > 1:4602643/1‑35 (MQ=255) ctgcttccggcatctcgttggaggccgccaccagc < 1:274902‑M1/4‑1 (MQ=255) ctgcttccggcagctcgttggaggccgccaccagc < 1:15326957‑M1/4‑1 (MQ=255) ctgcttccggcagctcgttggaggccgccaccagc < 1:14503025‑M1/4‑1 (MQ=255) ctgcttccggcagctcgttggaggccgccaccagc < 1:8258067‑M1/4‑1 (MQ=255) ctgcttccggcagctcgttggaggccgccaccagc < 1:14474871‑M1/4‑1 (MQ=255) ctgcttccggcagctcgttggaggccgccaccagc > 1:9009567‑M1/32‑35 (MQ=255) cggcttccggcagctcgttggaggccgccaccagc > 1:7673318‑M1/32‑35 (MQ=255) cgacgaTCACCGCCAGCAACTGTGGCAGGGAcagc > 1:9503475/1‑35 (MQ=21) cgacgaTCACCGCCAGCAACTGTGGCAGGAAcagc > 1:8706417/1‑35 (MQ=25) cgacgaTCACCGCCAGCAACGGTGGCAGGCAcagc > 1:17838947/1‑35 (MQ=37) tgcttccggcagctcgttggaggccgccaccagca > 1:17392045‑M1/31‑35 (MQ=255) tgcttccggcagctcgttggaggccgccaccagca < 1:13071199‑M1/5‑1 (MQ=255) gacgaTCACCGCCAGCAACGGTGGCAGCCAcagca > 1:4345477/1‑35 (MQ=255) gacgaTCACCGCCAGCAACGGTGGCAGCAAcagca > 1:3400655/1‑35 (MQ=255) gacgaTCACCGCCAGCAACGGTGGCAGCAAaagca > 1:8513967/1‑35 (MQ=255) tcttcgggcagctcgttggaggccgccaccagcag > 1:950249‑M1/30‑35 (MQ=255) gcttccggcagctcgttggaggccgcccccagcag < 1:19045485‑M1/6‑1 (MQ=255) acgaTCACCGCCAGCAACGGTGGCAGCAAcagcag > 1:10163754/1‑35 (MQ=255) acgaTCACCGCCAGCAACGGTGGCAGCAAcagcag > 1:13065980/1‑35 (MQ=255) acgaTCACCGCCAGCAACGGTGGCAGCAAaagcag > 1:8909840/1‑35 (MQ=255) cgaTCACCGCCAGCAACGGTGTCAGCAAcagcagc > 1:12779622/1‑35 (MQ=255) cgaTCACCGCCAGCAACGGTGGCAGCAAaagcagc > 1:11560962/1‑35 (MQ=255) gaTCACCGCCAGCAACGGTGGCAGGCAcaggagca > 1:15792148/1‑35 (MQ=25) gaTCACCGCCAGCAACGGTGGCAGGAAaagcagca > 1:14759745/1‑35 (MQ=37) gaTCACCGCCAGCAACGGTGGCAGCAAcagcagca > 1:8023379/1‑35 (MQ=255) gaTCACCGCCAGCAACGGTGGCAGCAAaaggaggc > 1:17460031/1‑33 (MQ=25) tCACCGCCAGCAACGGTGGCAGCAAcagcagcagg > 1:10625773/1‑34 (MQ=255) aCCGCCAGCAACGGTGGCAGCAACAGCAGCAgggc > 1:3326007/1‑35 (MQ=255) aCCGCCAGCAACGGTGGCAGCAACAGCAGCAgcgc > 1:10309811/1‑35 (MQ=255) aCCGCCAGCAACGGTGGCAGCAAAAACAGCAgcgg > 1:6564200/1‑34 (MQ=25) gCCAGCAACGGTGGCAGCAACAGCAGCAGGGcccg > 1:3042295/1‑33 (MQ=37) gCCAGCAACGGTGGCAGCAACAGCAGCAGCGcccg > 1:17430447/1‑33 (MQ=255) gCAACGGTGGCAGCAACAGCAGCAGCGCCCGcacc > 1:4159973/1‑34 (MQ=255) gCAACGGTGGCAGCAAAAGCAGCAGCGCCCCcaca > 1:18550845/1‑35 (MQ=21) gggTGGCAGCACCAGCAGCAGCGCCAGCACAATTa < 1:5998564/34‑1 (MQ=255) cGGTGTCAGCAACAGCAGCAGCGCCAGCACAATTa > 1:7059502/1‑35 (MQ=255) cGGTGGCAGCAACAGCAGCAGCGCCAGCACAAATa > 1:18928223/1‑35 (MQ=255) ggTGTCAGCAACAGCAGCAGCGCCAGCACAATTaa > 1:18974937/1‑35 (MQ=255) ggTGGCAGCAACAGCAGCAGCGCCAGCACAATTaa > 1:5330209/1‑35 (MQ=255) ggTGGCAGCAACAGCAGCAGCGCCAGCACAATTaa > 1:11991713/1‑35 (MQ=255) gTGCCACCACCAGCAGCAGCGCCAGCACAATTAac < 1:8485454/35‑1 (MQ=18) tGGCAGCAACAGCAGCAGCGCCAGCACAATTAaca > 1:14597181/1‑35 (MQ=255) tGGCAGCAACAGCAGCAGCGCCAGCACAATTAaca > 1:11177612/1‑35 (MQ=255) tGGCAGCAACAGCAGCAGCGCCAGCACAATTAaca > 1:9524708/1‑35 (MQ=255) tGGCAGCAACAGCAGCAGCGCCAGCACAATTAaca < 1:12352736/35‑1 (MQ=255) tGGCAGCAACAGCAGCAGCGCCAGCACAATTAaca > 1:2468341/1‑35 (MQ=255) gggCAGCAACAGCAGCAGCGCCAGCACAATTAaca < 1:8733093/34‑1 (MQ=255) gggCAGCAACAGCAGCAGCGCCAGCACAATTAaca < 1:18748223/34‑1 (MQ=255) ggccgccacCAGCAGCAGCGCCAGCACAATTAaca > 1:5013909‑M1/10‑35 (MQ=255) ggCAGCACCAGCAGCAGCGCCAGCACAATTAacac < 1:12597014/35‑1 (MQ=255) ggCAGCAACAGCAGCAGCGCCAGCCCAATTAaaac > 1:16065654/1‑35 (MQ=18) gccgccacCAGCAGCAGCGCCAGCACAATTAacac > 1:17507027‑M1/9‑35 (MQ=255) gccgccacCAGCAGCAGCGCCAGCACAATTAacac > 1:8725569‑M1/9‑35 (MQ=255) gcagcaCCAGCAGCAGCGCCAGCACAATTAACAcc < 1:15237930/35‑1 (MQ=255) gcagcaACAGCAGCAGCGCCAGCACAATTAACAcc > 1:1435050/1‑35 (MQ=255) gcagcaACAGCAGCAGCGCCAGCACAATTAACAcc > 1:10924112/1‑35 (MQ=255) gcagcaACAGCAGCAGCGCCAGCACAATTAACAcc > 1:12608881/1‑35 (MQ=255) gcagcaACAGCAGCAGCGCCAGCACAATTAACAcc > 1:11241903/1‑35 (MQ=255) cgacacCAGCAGCAGCGCCAGCACAATTAACACCg > 1:15622777‑M1/7‑35 (MQ=255) cagcaACAGCAGCAGCGCCAGCACAATTAACACCg > 1:4574808/1‑35 (MQ=255) cagcaACAGCAGCAGCGCCAGCACAATTAACACCg > 1:2923122/1‑35 (MQ=255) cagcaACAGCAGCAGCGCCAGCACAATTAACACCg > 1:1522525/1‑35 (MQ=255) cagcaACAGCAGCAGCCCCAGCACAATTAACACCg > 1:6023142/1‑35 (MQ=255) ggcaACAGCAGCAGCGCCAGCACAATTAACACCgt < 1:5954163/34‑1 (MQ=255) agcacCAGCAGCAGCGCCAGCACAATTAACACCgt > 1:9234295‑M1/6‑35 (MQ=255) agcaACAGCAGCAGCGCCAGCACAATTAACAccag > 1:2578083/1‑33 (MQ=255) agcaACAGCAGCAGCGCCAGCACAATTAACACCgt > 1:9793043/1‑35 (MQ=255) agaacCAGCAGCAGCGCCAGCACAATTAACACCgt > 1:5382211‑M1/6‑35 (MQ=255) acaacCAGCAGCAGCGCCAGCACAATTAACACCgt > 1:5493073‑M1/6‑35 (MQ=255) acaacCAGCAGCAGCGCCAGCACAATTAACACCgt > 1:17756461‑M1/6‑35 (MQ=255) gcacCAGCAGCAGCGCCAGCACAATTAACACCgtg > 1:16563706‑M1/5‑35 (MQ=255) gcaACAGCAGCAGCGCCAGCACAATTAACACCgtg < 1:4249484/35‑1 (MQ=255) gcaACAGCAGCAGCGCCAGCACAATTAACACCgtg > 1:8610887/1‑35 (MQ=255) ccaACAGCAGCAGCGCCAGCACAATTAACACCgtg < 1:18871352/34‑1 (MQ=255) cacCAGCAGCAGCGCCAGCACAATTAACACCgtgt > 1:5268836‑M1/4‑35 (MQ=255) caACAGCAGCAGCGCCAGCCCAATTAACACCgtgt > 1:13243855/1‑35 (MQ=255) caACAGCAGCAGCGCCAGCACAATTAACACCgtgt > 1:12215279/1‑35 (MQ=255) caACAGCAGCAGCGCCAGCACAATTAACACCgtgt > 1:12844638/1‑35 (MQ=255) caACAGCAGCAGCGCCAGCACAATTAACACCgtgt > 1:7471330/1‑35 (MQ=255) caCAGCAGCAGCGCCAGCACAATTAACACCGTGTc < 1:1335408/34‑1 (MQ=255) aaCAGCAGCAGCGCCAGCACAATTAACACCGTGTc < 1:2395070/35‑1 (MQ=255) aaCAGCAGCAGCGCCAGCACAATTAACACCGTGTc > 1:3036798/1‑35 (MQ=255) aaCAGCAGCAGCGCCAGCACAATTAACACCGTGTc > 1:7939033/1‑35 (MQ=255) cCGGCAGCAGCGCCAGCACAATTAACACCGTGTCg > 1:733036‑M1/2‑35 (MQ=255) cCAGCAGCAGCGCCAGCACAATTAACACCGTGTCg > 1:18123404‑M1/2‑35 (MQ=255) aCAGCAGCAGCGCCAGCACAATTAACACCGTGTCg > 1:2628281/1‑35 (MQ=255) aCAGCAGCAGCGCCAGCACAATTAACACCGTGTCg > 1:16432675/1‑35 (MQ=255) aCAGCAGCAGCGCCAGCACAATTAACACCGTGTCg > 1:8162257/1‑35 (MQ=255) aCAGCAGCAGCGCCAGCACAATTAACACCGTGTCg > 1:5417677/1‑35 (MQ=255) aCAGCAGCAGCGCCAGCACAATTAACACCGTGTCg < 1:9725157/35‑1 (MQ=255) aCAGCAGCAGCGCCAGCACAATTAACACCGTGTCg > 1:12024412/1‑35 (MQ=255) CAGCAGCAGCGCCAGCACAATTAACACCGTGTCGc < 1:19825378‑M1/35‑1 (MQ=255) | CATCGACGATCACCGCCAGCAACGGTGGCAGCAACAGCAGCAGCGCCAGCACAATTAACACCGTGTCGC > REL606/76389‑76457 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |