New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1337070 = | 141 (1.370) | 6 (0.070) | 5/42 | NT | 7.6% | coding (463/591 nt) | ribA | GTP cyclohydrolase II protein |
? | REL606 | 4326307 = | 22 (0.240) | coding (1153/1341 nt) | dcuB | C4‑dicarboxylate antiporter |
AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1337106‑1337070 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagCCGGTGCTGAAGCCACGATGTATGCCGGATCAAC > REL606/4326307‑4326340 AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAA > 1:3445463/1‑35 AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAA < 1:5168830/35‑1 AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAA > 1:15845067/1‑35 AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAA > 1:13699265/1‑35 AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAA > 1:15527553/1‑35 ATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAA > 1:19031775/1‑35 ATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAA > 1:9108452/1‑35 ATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAA > 1:13208978/1‑35 ATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAA > 1:13226339/1‑35 TGAAGTCCGCTTGTTAACCAATAACCCGAAAAAAG < 1:9353470/35‑1 AATAACCCGAAAAAAGCCGGTGCTGAAGCCACGAT < 1:6660830/35‑1 TAACCCGAAAAAAGCCGGTGCTGAAGCCACGATGT < 1:8250746/35‑1 AACCCGAAAAAAGCCGGTGCTGAAGCCACGATGTA < 1:6725320/35‑1 AACCCAAAAAAAGCCGGTGCTGAAGCCACGATGTA < 1:5301302/35‑1 ACCCGGAAAAAGCCGGTGCTGAAGCCACGATGTAT < 1:243713/35‑1 CCCAAAAAAAGCCGGTGCTGAAGCCACGATGTATG < 1:5013937/35‑1 gGAAAAAAGCCGGTGCTGAAGCCACGATGTATGCC < 1:17599155/34‑1 cggAAAAAGCCGGTGCTGAAGCCACGATGTATGCC < 1:201886/32‑1 GAACAAAGCCGGTGCTGAAGCCACGATGTATGCCG < 1:10959388/35‑1 AAAAGCCGGTGCTGAAGCCACGATGTATGCCGGAT < 1:10875584/35‑1 AAAGCCGGTGCTGAAGCCACGATGTATGCCGGATC < 1:19267876/35‑1 AAAGCCGGTGCTAAAGCCACGATGTATGCCGGATC < 1:15816083/35‑1 AAAGCCGGGGCTGAAGCCACGATGTATGCCGGATC < 1:2847948/35‑1 AAGCCGGTGCTGAAGCCACGATGTATGCCGGATCA < 1:18429888/35‑1 AAGCCGGTGCTGAAGCCACGATGTATGCCGGATCA > 1:6927484/1‑35 AAGCCGGTGCTGAAGCCACGATGTATGCCGGATCA < 1:11851125/35‑1 AAGCCGGTGCTGAAGCCACGATGTATGCCGGATCA < 1:9770302/35‑1 AGCCGGTGCTGAAGCCACGATGTATGCCGGATCAA > 1:17001189/1‑35 AGCCGGTGCTGAAGCCACGATGTATGCCGGATCAA < 1:7066477/35‑1 GCCGGTGCTGAAGCCACGATGTATGCCGGATCAAC < 1:13039844/35‑1 GCCGGTGCTGAAGCCACGATGTATGCCGGATCAAC > 1:9273656/1‑35 GCCGGTGCTGAAGCCACGATGTATGCCGGATCAAC < 1:979453/35‑1 GCCGGTGCTGAAGCCACGATGTATGCCGGATCAAC > 1:997233/1‑35 GCCGGTGCTAAAGCCACGATGTATGCCGGATCAAC < 1:12811425/35‑1 AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1337106‑1337070 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagCCGGTGCTGAAGCCACGATGTATGCCGGATCAAC > REL606/4326307‑4326340 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |