Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 4,110,237 | IS150 (–) +3 bp | 100% | coding (296‑298/2433 nt) | metL → | bifunctional aspartate kinase II/homoserine dehydrogenase II |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3893554 = | NA (NA) | 139 (1.480) | 43/44 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 4110237 = | 0 (0.000) | coding (296/2433 nt) | metL | bifunctional aspartate kinase II/homoserine dehydrogenase II | |||||
* | ? | REL606 | = 3894996 | NA (NA) | 79 (0.770) | 28/48 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 4110239 | 0 (0.000) | coding (298/2433 nt) | metL | bifunctional aspartate kinase II/homoserine dehydrogenase II |
Only 100 of 403 total aligned reads displayed.
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3893589‑3893554 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caTTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGC > REL606/4110237‑4110270 TTCCATTTCATCGTCCAACAAAATNGGTGCAGTAC > 1:6003645/1‑35 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:17180071/1‑35 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:9370278/35‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:5734382/1‑35 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:6477318/35‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:281989/35‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:2459387/1‑35 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:5176059/35‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:721159/1‑35 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:7331194/1‑35 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:2326265/1‑35 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:7535587/1‑35 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:14948585/35‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:4912/1‑35 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:20115656/1‑35 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:3805691/35‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:10902917/35‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:4160628/35‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:15967924/35‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:8424634/35‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:10292550/1‑35 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:10124118/1‑35 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:15675242/35‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:4413688/35‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:14290180/35‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:1773401/1‑35 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:1807103/1‑35 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:110106/35‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:1846910/1‑35 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:19792484/35‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:9496800/1‑35 TCCATTTCATCGTCCAAAAAAATGGGTGCAGTACA < 1:11425218/35‑1 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAc < 1:3440137/35‑2 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAc < 1:1895383/35‑2 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAc < 1:4624335/35‑2 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAc > 1:10811009/1‑34 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAT > 1:4810149/1‑35 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAT < 1:14051714/35‑1 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAT > 1:6937000/1‑35 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAT > 1:11878829/1‑35 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAT > 1:11287465/1‑35 CATTTCATCGTCCAACAAAATGGGTGCAGTACAct < 1:15148676/35‑3 CATTTCATCGTCCAACAAAATGGGTGCAGTACAct < 1:6705813/35‑3 CATTTCATCGTCCAACAAAATGGGTGCAGTACAct > 1:12753785/1‑33 CATTTCATCGTCCAACAAAATGGGTGCAGTACAcc > 1:3516709/1‑33 CATTTCATCGTCCAACAAAATGGGTGCAGTACAcc < 1:14477234/35‑3 CATTTCATCGTCCAACAAAATGGGTGCAGTACAcc > 1:7905234/1‑33 ATTTCATCGTCCAACAAAATGGGTGCAGTACActt < 1:766926/35‑4 ATTTCATCGTCCAACAAAATGGGTGCAGTACActc < 1:8480363/35‑4 ATTTCATCGTCCAACAAAATGGGTGCAGTACAccg > 1:12922105/1‑32 ATTTCATCGTCCAACAAAATGGGTGCAGTACAccg < 1:11568489/35‑4 ATTTCATCGTCCAACAAAATGGGTGCAGTACATTA > 1:3268994/1‑35 TTCATCGTCCAACAAAATGGGTGCAGTACATTAGC > 1:14588868/1‑35 TTCATCGTCCAACAAAATGGGTGCAGTACATTAGC > 1:10423634/1‑35 TTCATCGTCCAACAAAATGGGTGCAGTACATTAGC < 1:19901986/35‑1 TTCATCGTCCAACAAAATGGGTGCAGTACACTAGa > 1:13266848/1‑34 TCATCGTCCAACAAAATGGGTGCAGTACATTAGCG < 1:12446919/35‑1 TCATCGTCCAACAAAATGGGTGCAGTACATTAGCG < 1:17104511/35‑1 CATCGTCCAACAAAATGGGTGCAGTACATTAGCGC > 1:6420449/1‑35 CATCGTCCAACAAAATGGGTGCAGTACATTAGCGC < 1:20240115/35‑1 ATCGTCCAACAAAATGGGTGCAGTACATTAGCGCT < 1:12248645/35‑1 GTCCAACAAAATGGGTGCAGTACATTAGCGCTTTT < 1:9201143/35‑1 GTCCAACAAAATGGGTGCAGTACATTAGCGCTTTT < 1:17011524/35‑1 GTCCAACAAAATGGGTGCAGTACATTAGCGCTTTT > 1:16256735/1‑35 TCCAACAAAATGGGTGCAGTACATTAGCGCTTTTG > 1:17520121/1‑35 TCCAACAAAATGGGTGCAGTACATTAGCGCTTTTG < 1:2257161/35‑1 CCAACAAAATGGGTGCAGTACATTAGCGCTTTTGT < 1:11780185/35‑1 CAACAAAATGGGTGCAGTACATTAGCGCTTTTGTC > 1:2973662/1‑35 CAACAAAATGGGTGCAGTACATTAGCGCTTTTGTC < 1:3113704/35‑1 CAACAAAATGGGTGCAGTACATTAGCGCTTTTGTC > 1:13475766/1‑35 AACAAAATGGGTGCAGTACATTAGCGCTTTTGTCA > 1:10016796/1‑35 ACAAAATGGGTGCAGTACATTAGCGCTTTTGTCAG > 1:19752379/1‑35 CAAAATGGGTGCAGTACATTAGCGCTTTTGTCAGC < 1:796780/35‑1 CAAAATGGGTGCAGTACATTAGCGCTTTTGTCAGC < 1:13062143/35‑1 CAAAATGGGTGCAGTACATTAGCGCTTTTGTCAGC > 1:8978765/1‑35 CAAAATGGGTGCAGTACATTAGCGCTTTTGTCAGC > 1:5622237/1‑35 CAAAATGGGTGCAGTACATTAGCGCTTTTGTCAGC < 1:17429776/35‑1 AAAATGGGTGCAGTACATTAGCGCTTTTGTCAGCG > 1:16508950/1‑35 AAAATGGGTGCAGTACATTAGCGCTTTTGTCAGCG < 1:179675/35‑1 AAATGGGTGCAGTACATTAGCGCTTTTGTCAGCGA < 1:15433026/35‑1 AATGGGTGCAGTACATTAGCGCTTTTGTCAGCGAT < 1:4228244/35‑1 AATGGGTGCAGTACATTAGCGCTTTTGTCAGCGAT < 1:3739573/35‑1 TGGGTGCAGTACATTAGCGCTTTTGTCAGCGATCT > 1:1871137/1‑35 GGGTGCAGTACATTAGCGCTTTTGTCAGCGATCTG < 1:17664621/35‑1 GGTGCAGTACATTAGCGCTTTTGTCAGCGATCTGG > 1:12723312/1‑35 nnGCAGNACATTAGCGCTTTTGTCAGCGATCTGGA < 1:8854100/33‑1 TGCAGTACATTAGCGCTTTTGTCAGCGATCTGGAA > 1:10647483/1‑35 TGCAGTACATTAGCGCTTTTGTCAGCGATCTGGAA < 1:19382616/35‑1 GCAGTACATTAGCGCTTTTGTCAGCGATCTGGAAC > 1:9291880/1‑35 GCAGTACATTAGCGCTTTTGTCAGCGATCTGGAAC < 1:18258111/35‑1 AGTACATTAGCGCTTTTGTCAGCGATCTGGAACGC > 1:16782446/1‑35 GTACATTAGCGCTTTTGTCAGCGATCTGGAACGCC > 1:6191893/1‑35 GTACATTAGCGCTTTTGTCAGCGATCTGGAACGCC < 1:810302/35‑1 TACATTAGCGCTTTTGTCAGCGATCTGGAACGCCT > 1:19461052/1‑35 ACATTAGCGCTTTTGTCAGCGATCTGGAACGCCTG > 1:8235257/1‑35 ACATTAGCGCTTTTGTCAGCGATCTGGAACGCCTG < 1:5338331/35‑1 ACATTAGCGCTTTTGTCAGCGATCTGGAACGCCTG < 1:15070914/35‑1 ACATTAGCGCTTTTGTCAGCGATCTGGAACGCCTG > 1:9807891/1‑35 ATTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGC > 1:13650495/1‑35 ATTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGC < 1:10557950/35‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3893589‑3893554 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caTTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGC > REL606/4110237‑4110270 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |