New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 445976 = | 79 (0.770) | 9 (0.120) | 4/36 | NT | 13.8% | coding (944/1287 nt) | amtB | ammonium transporter |
? | REL606 | 3083447 = | 53 (0.690) | coding (197/495 nt) | yqhA | hypothetical protein |
Only 100 of 134 total aligned reads displayed.
ACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGTCATATCCACCAGCGACAGCAACACGAG > REL606/3083413‑3083481 | aCCGTAAAACATCACCATCACCAGCAAACCGCCaa > 1:9236371/1‑35 (MQ=255) aCCGGAAAACATCACCATCACCAGCAAACCGCCaa > 1:15360862/1‑35 (MQ=255) aCCGGAAAACATCACCATCACCAGCAAACCGCCaa > 1:16017803/1‑35 (MQ=255) aCCGGAAAACATCACCATCACCAGCAAACCGCCaa > 1:1260663/1‑35 (MQ=255) ccGGAAAACATCACCATCACCAGCAAACCGCCAAc > 1:8265690/1‑35 (MQ=255) ccGGAAAACATCACCATCACCAGCAAACCGCCAAc > 1:1400230/1‑35 (MQ=255) ccGGAAAACATCACCATCACCAGCAAACCGCCAAc > 1:18704846/1‑35 (MQ=255) ccGGAAAACATCACCATCACCAGCAAACCGCCAAc > 1:3091365/1‑35 (MQ=255) ccGGAAAACATCACCAACACCAGCAAACCGCCAAc > 1:171894/1‑35 (MQ=255) cGGAAAACATCACCATCACCAGCAAACCGCCAAct > 1:7989480/1‑34 (MQ=255) cGGAAAACATCACCATCACCAGCAAACCGCCAAcc > 1:6267572/1‑35 (MQ=255) cGGAAAACATCACCATCACCAGCAAACCGCCAAcc > 1:1385821/1‑35 (MQ=255) ggAAAACATCACCATCACCAGCAAACCGCCAACCa > 1:5487031/1‑35 (MQ=255) gAAAACATCACCATCACCAGCAAACCGCCAACCAg > 1:17245544/1‑35 (MQ=255) aaaaCATCACCATCACCAGCAAACCGCCAACCAGc > 1:5193842/1‑35 (MQ=255) aaaaCATCACCATCACCAGCAAACCACCAACCAGc > 1:3590260/1‑35 (MQ=255) aaaCATCACCATCACCAGCAAACCGCCAACCAGCg > 1:11245412/1‑35 (MQ=255) aCATCACCATCACCAGCAAACCGCCAACCAGCGTc > 1:13544301/1‑35 (MQ=255) aCATCACCATCACCAGCAAACCGCCAACCAGCGTc > 1:1419086/1‑35 (MQ=255) catcaccatcacCAGCAAACCGCCAACCAGCGTCa > 1:9216898/1‑35 (MQ=255) catcaccatcacCAGCAAACCGCCAACCAGCGTCa > 1:5784107/1‑35 (MQ=255) catcaccatcacCAGCAAACCGCCAACCAGCGTCa > 1:11542625/1‑35 (MQ=255) catcaccatcacCAGCAAACCGCCAACCAGCGTCa > 1:10235556/1‑35 (MQ=255) tcaccatcaccaGCAAACCGCCAACCAGCGTCata > 1:8311964/1‑35 (MQ=255) caccatcaccaGCAAACCGCCAACCAGCGTCatat > 1:20003672/1‑35 (MQ=255) caccatcaccaGCAAACCGCCAACCAGCGTCatat > 1:11241729/1‑35 (MQ=255) cccatccccaCAAACCCGCCAACCAGCGTCATATc < 1:19217198/34‑1 (MQ=12) accatcaccaGCAAACCGCCAACCAGCGTCATATc > 1:15623885/1‑35 (MQ=255) accatcaccaGCAAACCGCCAACCAGCGTCATATc > 1:5721320/1‑35 (MQ=255) accatcaccaGCAAACCGCCAACCAGCGTCATATc > 1:10260125/1‑35 (MQ=255) accatcaccaGCAAACCGCCAACCAGCGTCATATc > 1:13964080/1‑35 (MQ=255) ccatcactaGCAAACCGCCAACCAGCGTCATATcc > 1:14702879/1‑35 (MQ=255) ccatcaccaGCAAACCGCCAACCAGCGTCATATcc > 1:19345143/1‑35 (MQ=255) ccatcaccaGCAAACCGCCAACCAGCGTCATATcc > 1:4789492/1‑35 (MQ=255) ccaccaccaGAAACCCGCCAACCAGCGTCATATcc < 1:3240604/35‑1 (MQ=21) catcaccaGCAAACCGCCAACCAGCGTCATATcca > 1:4375651/1‑35 (MQ=255) catcaccaGCAAACCGCCAACCAGCGTCATATcca > 1:7310806/1‑35 (MQ=255) catcaccaGCAAACCGCCAACCAGCGTCATATcca > 1:11449523/1‑35 (MQ=255) catcaccaGCAAACCGCCAACCAGCGTCATATcca > 1:20567467/1‑35 (MQ=255) catcaccaGCAAACCGCCAACCAGCGTCATATcca > 1:916530/1‑35 (MQ=255) atcaccaGCAAACCGCCAACCAGCGTCATATccac > 1:1070274/1‑35 (MQ=255) atcaccaGCAAACCGCCAACCAGCGTCATATccac > 1:8848635/1‑35 (MQ=255) tcaccaGCAAACCGCCAACCAGCGTCATATccacc > 1:9395593/1‑35 (MQ=255) tcaccaGCAAACCGCCAACCAGCGTCATATccacc > 1:14701166/1‑35 (MQ=255) tcaccaGCAAACCGCCAACCAGCGTCATATccacc > 1:2322138/1‑35 (MQ=255) tcaccaGCAAACCGCCAACCAGCGTCATATccacc > 1:20193705/1‑35 (MQ=255) ccaccaAAAACCCGCCAACCAGCGTCATATccacc < 1:3343930/34‑1 (MQ=25) caccaGCAAACCGCCAACCAGCGTCATATccacca > 1:12156843/1‑35 (MQ=255) caccaGCAAACCGCCAACCAGCGTCATATccacca > 1:10525793/1‑35 (MQ=255) caccaGCAAACCGCCAACCAGCGTCATATccacca > 1:8771073/1‑35 (MQ=255) cccagaaacccgccaACCAGCGTCATATCCACCAg < 1:7040580‑M2/20‑1 (MQ=255) cccacaaacccgccaACCAGCGTCATATCCACCAg < 1:19888549‑M2/20‑1 (MQ=255) accaGCAAACCGCCAACCAGCGTCATATCCACCAg > 1:17768337/1‑35 (MQ=255) ccagaaacccgccaACCAGCGTCATATCCACCAGc < 1:7898509‑M2/21‑1 (MQ=255) ccacaaacccgccaACCAGCGTCATATACACCAGc < 1:5969181‑M2/21‑1 (MQ=255) ccaGCAAACCGCCAACCAGCGTCATATCCACCAGc > 1:3338808/1‑35 (MQ=255) ccaGCAAACCGCCAACCAGCGTCATATCCACCAGc > 1:12282369/1‑35 (MQ=255) cacaaccccgccaACCAGCGTCATATCCACCAGCg < 1:6501957‑M2/22‑1 (MQ=255) cacaaacccgccaACCAGCGTCATATCCACCAGCg < 1:14194175‑M2/22‑1 (MQ=255) caGCAAACCGCCAACCAGCGTCATATCCACCAGCg > 1:7928925/1‑35 (MQ=255) gCAAACCGCCAACCAGCGTCATATCCACCAGCGAc > 1:6242604/1‑35 (MQ=255) gCAAACCGCCAACCAGCGTCATATCCACCAGCGAc > 1:6480026/1‑35 (MQ=255) cAAACCGCCAACCAGCGTCATATCCACCAGCGACa > 1:14415123/1‑35 (MQ=255) cAAACCGCCAACCAGCGTCATATCCACCAGCGACa > 1:2615598/1‑35 (MQ=255) cAAACCGCCAACCAGCGTCATATCCACCAGCGACa > 1:20422890/1‑35 (MQ=255) cAAACCGCCAACCAGCGTCATATCCACCAGCGACa > 1:5376875/1‑35 (MQ=255) cAAACCGCCAACCAGCGTCATATCCACCAGCGACa > 1:6389214/1‑35 (MQ=255) aaccccgccaACCAGCGTCATATCCACCAGCGACa < 1:8651321‑M2/25‑1 (MQ=255) aaccccgccaACCAGCGTCATATCCACCAGCGACa < 1:6804034‑M2/25‑1 (MQ=255) accccgccaACCAGCGTCATATCCACCAGCGACAg < 1:11470647‑M2/26‑1 (MQ=255) aacccgccaCCCAGCGTCATATCCACCAGCGACAg < 1:15626212‑M2/26‑1 (MQ=255) aaaCCGCCAACCAGCGTCATATCCACCAGCGACAg > 1:747694/1‑35 (MQ=255) aaaCCGCCAACCAGCGTCATATCCACCAGCGACAg > 1:9663091/1‑35 (MQ=255) aaaCCGCCAACCAGCGTCATATCCACCAGCGACAg > 1:4226453/1‑35 (MQ=255) aaCCGCCAACCAGCGTCATATCCACCAGCGACAGc > 1:2445479/1‑35 (MQ=255) cccgccaCCCAGCGTCATATCCACCAGCGACAGCa < 1:10939279‑M2/28‑1 (MQ=255) cccgccaACCAGCGTCATATCCACCAGCGACAGCa < 1:6673678‑M2/28‑1 (MQ=255) ccccccaACCAGCGTCATATCCACCAGCGACAGCa < 1:14611056‑M2/28‑1 (MQ=255) aCCGCCAACCAGCGTCATATCCACCAGCGACAGCa > 1:18757275/1‑35 (MQ=255) aCCGCCAACCAGCGTCATATCCACCAGCGACAGCa > 1:13309486/1‑35 (MQ=255) aCCGCCAACCAGCGTCATATCCACCAGCGACAGCa > 1:1270572/1‑35 (MQ=255) ccgccaCCCAGCGTCATATCCACCAGCGACAGCaa < 1:3145092‑M2/29‑1 (MQ=255) ccgccaACCAGCGTCATATCCACCAGCGACAGCaa > 1:817903‑M2/7‑35 (MQ=255) ccgccaACCAGCGTCATATCCACCAGCGACAGCaa < 1:1689436‑M2/29‑1 (MQ=255) ccgccaACCAGCGTCATATCCACCAGCGACAGCaa < 1:17854978‑M2/29‑1 (MQ=255) ccgccaACCAGCGTCATATCCACCAGCGACAGCaa > 1:18144691‑M2/7‑35 (MQ=255) ngccaACCAGCGTCATATCCACCAGCGACAGCAac > 1:10692519‑M2/6‑35 (MQ=255) cgccaACCAGCGTCATATCCACCAGCGACAGCAac > 1:13491376‑M2/6‑35 (MQ=255) cgccaACCAGCGTCATATCCACCAGCGACAGCAac > 1:15300799‑M2/6‑35 (MQ=255) gccaACCAGCGTCATATCCACCAGCGACAGCAaca > 1:13710709‑M2/5‑35 (MQ=255) ccaCCCAGCGTCATATCCACCAGCGACAGCAacac < 1:12750830‑M2/32‑1 (MQ=255) ccaACCAGCGTCATATCCACCAGCGACAGCAacac < 1:10286828‑M2/32‑1 (MQ=255) ccaACCAGCGTCATATCCACCAGCGACAGCAacac < 1:1564620‑M2/32‑1 (MQ=255) ccaACCAGCGTCATATCCACCAGCGACAGCAacac > 1:17563606‑M2/4‑35 (MQ=255) ccaACCAGCGTCATATCCACCAGCGACAGCAacac > 1:19888142‑M2/4‑35 (MQ=255) ccaACCAGCGTCATATCCACCAGCGACAGCAacac > 1:5867750‑M2/4‑35 (MQ=255) ccaACCAGCGTCATATCCACCAGCGACAGCAacac < 1:5411364‑M2/32‑1 (MQ=255) aACCAGCGTCATATCCACCAGCGACAGCAACACGa > 1:15460935‑M2/2‑35 (MQ=255) aACCAGCGTCATATCCACCAGCGACAGCAACACGa > 1:15744411‑M2/2‑35 (MQ=255) aCCAGCGTCATATCCACCAGCGACAGCAACACGAg < 1:17076173/35‑1 (MQ=255) | ACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGTCATATCCACCAGCGACAGCAACACGAG > REL606/3083413‑3083481 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |