New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3757525 | 76 (0.740) | 22 (0.260) | 8/40 | NT | 23.1% | coding (295/618 nt) | yicG | conserved inner membrane protein |
? | REL606 | 4085859 = | 83 (0.970) | intergenic (+57/‑92) | cpxP/fieF | periplasmic protein combats stress/ferrous iron efflux protein F |
Only 100 of 353 total aligned reads displayed.
AGACACCATCCCTGTCTTCCCCCACATGATGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAA > REL606/4085825‑4085893 | ttaatcagaccattggtcgagctatcgtggcTggg < 1:18781774‑M1/4‑1 (MQ=255) tggcctggcgatatctcaggccagccattggtggg > 1:6165689‑M2/35‑35 (MQ=255) gtgtttctggtgctcgatgcgctcggactggtggg > 1:2173867‑M2/35‑35 (MQ=255) gaccatgtggtttcttcatcctcagtaaggctggg > 1:680566‑M2/34‑35 (MQ=255) gaccatgtggtttcttcatcctcagtaaggctggg > 1:4685313‑M2/34‑35 (MQ=255) gaccatgtggtttcttcatcctcagtaaggctggg > 1:1187472‑M2/34‑35 (MQ=255) gaccatgtggtttcttcatcctcagtaaggctggg > 1:3618251‑M2/34‑35 (MQ=255) aGACACCATCCCTGTCTTCCCCCACATGATGTggg > 1:9093314/1‑35 (MQ=255) aGACACCATCCCTGTCTTCCCCCACATGATGTggg < 1:17594398/35‑1 (MQ=255) aGACACCATCCCTGTCTTCACCCACATGATGTggg < 1:11563602/35‑1 (MQ=255) ttttttgcaaggctatttatggtgcggatgggggg > 1:13559921‑M2/32‑35 (MQ=255) tcaaagagttcggcaacaaaggcttccggctgggn > 1:4861133‑M2/33‑35 (MQ=255) taatcagaccattggtcgagctatcgtggcTgggg < 1:7914919‑M1/5‑1 (MQ=255) ggcctggcgatatctcaggccagccattggtgggg > 1:7738155‑M2/34‑35 (MQ=255) gacgcgcagttccctccgcgatggcctggctgggg > 1:12083878‑M2/33‑35 (MQ=255) gacgcgcagttccctccgcgatggcctggctgggg > 1:1483987‑M2/33‑35 (MQ=255) gACACCATCCCTGTCTTCCCCCACATGATGTgggg > 1:3687861/1‑35 (MQ=255) gtttctggtgctcgatgcgctcggactggtggggg > 1:15223736‑M2/33‑35 (MQ=255) ccatgtggtttcttcatcctcagtaaggctggggg > 1:10698812‑M2/32‑35 (MQ=255) acgcgcagttccctccgcgatggcctggctggggg > 1:1197586‑M2/32‑35 (MQ=255) cctggcgatatctcaggccagccattggtgggggg > 1:609670‑M2/32‑34 (MQ=255) catgtggtttcttcatcctcagtaaggctgGGGGt > 1:12770353‑M2/31‑35 (MQ=255) aaagagttcggcaacaaaggcttccggctgggggg > 1:18428014‑M2/31‑34 (MQ=255) tcagaccattggtcgagctatcgtggcTGGGGGtt < 1:9177471‑M1/8‑1 (MQ=255) tcagaccattggtcgagctatcgtggcTGGGGGtt < 1:14000037‑M1/8‑1 (MQ=255) tcagaccattggtcgagctatcgtggcTGGGGGtt < 1:8010719‑M1/8‑1 (MQ=255) atgtggtttcttcatcctcagtaaggctgGGGgta > 1:4366898‑M2/30‑34 (MQ=255) atgtggtttcttcatcctcagtaaggctgGGGGtt > 1:19756615‑M2/30‑35 (MQ=255) aagagttcggcaacaaaggcttccggctgGGGGtt > 1:16179302‑M2/30‑35 (MQ=255) ttgcaaggctatttatggtgcggatggGGGGGttt > 1:3771449‑M2/28‑35 (MQ=255) tgtggtttcttcatcctcagtaaggctgGGGGttt > 1:15621443‑M2/29‑35 (MQ=255) tctggtgctcgatgcgctcggactggtggGGGttt > 1:12362304‑M2/30‑35 (MQ=255) cgcagttccctccgcgatggcctggctggggggtg > 1:7444298‑M2/29‑32 (MQ=255) cgcagttccctccgcgatggcctggctgGGGGgtt > 1:14261561‑M2/29‑35 (MQ=255) ccATCCCTGTCTTCCCCCACATGATGTGGGGGttt < 1:18202105/35‑1 (MQ=255) ccATCCCTGTCTTCCCCCACATGATGTGGGGGttt < 1:8665756/35‑1 (MQ=255) ccATCCCTGTCTTCCCCCACATGATGTGGGGGgtt > 1:18540333/1‑35 (MQ=255) agagttcggcaacaaaggcttccggctgGGGGttt > 1:8190845‑M2/29‑35 (MQ=255) gagttcggcaacaaatgcttccggctgGGGGtttt > 1:4014834‑M2/28‑35 (MQ=255) gagttcggcaacaaaggcttccggctgGGGGtttt > 1:10478704‑M2/28‑35 (MQ=255) cATCCCTGTCTTCCCCCACATGATGTGGGGGtttt < 1:695162/35‑1 (MQ=255) cATCCCTGTCTTCCCCCACATGATGTGGGGGtttt < 1:2871431/35‑1 (MQ=255) agaccattggtcgagctatcgtggcTGGGGGtttt < 1:20032548‑M1/10‑1 (MQ=255) cagttccctccgcgatggcctggctgGGGGttatt > 1:2900954‑M2/27‑35 (MQ=255) agttcggcaacaaagtcttccggctgGGGGttttt > 1:10958569‑M2/27‑35 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGttttt < 1:1265610/35‑1 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGgtttt > 1:5196864/1‑35 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGgtttt > 1:13078307/1‑35 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGgtttt > 1:18623174/1‑35 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGgtttt > 1:10046580/1‑35 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGgtttt > 1:15692888/1‑35 (MQ=255) tCCCTGTCTTCCCCCACATGATGTGGGGGgttttt > 1:16070879/1‑35 (MQ=255) gttcggcaacaaaggcttccggctgGGGGtttttt > 1:5448958‑M2/26‑35 (MQ=255) ggtttcttcatcctcagtaaggctgGGGTtttttt > 1:9421558‑M2/26‑35 (MQ=255) ggtttcttcatcctcagtaaggctgGGGGtttttt > 1:16438728‑M2/26‑35 (MQ=255) caaggctatttatggtgcggatggGGGGGtttttt > 1:20613145‑M2/25‑35 (MQ=255) gtttcttcatcctcagtaaggctgGGGTttttttt > 1:19281010‑M2/25‑35 (MQ=255) gtttcttcatcctcagtaaggctgGGGGtcttttt > 1:17830888‑M2/25‑35 (MQ=255) gtgctcgatgcgctcggactggtggGGTttttttt > 1:1800824‑M2/26‑35 (MQ=255) gatatctcaggccagccattggtggGGGttttatt > 1:3264642‑M2/26‑35 (MQ=255) cccTGTCTTCCCCCACATGATGTGGGGGttttttt < 1:19054136/35‑1 (MQ=255) cccTGTCTTCCCCCACATGATGTGGGGGgtttttt > 1:11782813/1‑35 (MQ=255) tgctcgatgcgctcggactggtggGGgttcttttc > 1:8402984‑M2/25‑34 (MQ=255) ccTGTCTTCCCCCACATGATGTGGGGGgttttttt > 1:7100548/1‑35 (MQ=255) cattggtcgagctatcgtggcTGGTGGtttttttt < 1:15385062‑M1/14‑1 (MQ=255) cattggtcgagctatcgtggcTGGGGGtttttttt < 1:11234372‑M1/14‑1 (MQ=255) atatctcaggccagccattggtggGggttttttgt > 1:10079397‑M2/25‑33 (MQ=255) aggctatttatggtgcggatggGGGGGtttttttt > 1:2737138‑M2/23‑35 (MQ=255) ttcttcatcctcagtaaggctgGGGgttttttttt > 1:13402392‑M2/23‑34 (MQ=255) ttcttcatcctcagtaaggctgGGGgttttttttt > 1:6902834‑M2/23‑34 (MQ=255) ttcttcatcctcagtaaggctgGGGgtattttttt > 1:4182515‑M2/23‑34 (MQ=255) attggtcgagctatcgtggcTGGTGgttttttttt < 1:5490673‑M1/15‑2 (MQ=255) attggtcgagctatcgtggcTGGGGgttttttttt < 1:6242381‑M1/15‑2 (MQ=255) tGTCTTCCCCCACATGATGTGGGGGgttttttttt > 1:17169856/1‑33 (MQ=37) tGTCTTCCCCCACATGATGTGGGGGTTTTTTTTAt < 1:9696462/35‑1 (MQ=255) ccctccgcgatggcctggctgGGGGGTTTTTTTAt > 1:6429552‑M2/22‑35 (MQ=255) tggtcgagctatcgtggcTGGgggttttttttttt < 1:14650465‑M1/17‑4 (MQ=255) cttcatcctcagtaaggctgGgggttttttttttt > 1:4603767‑M2/21‑32 (MQ=255) cctccgcgatggcctggctgGGGGTTTTTTTTatt > 1:9515210‑M2/21‑34 (MQ=255) cTTCCCCCACATGATGTGGGGGGTTTTTTTATTCt > 1:20254376/1‑35 (MQ=37) gcccccGCATGATGTGGGGGTTTTTTTTATCCTCa < 1:12231398/34‑1 (MQ=255) cccccACATGATGTGGGGGTTTTTTTTATCCTCaa < 1:15092163/35‑1 (MQ=255) cccccACATGATGTGGGGGGTTTTTTTATCCTCaa > 1:10326830/1‑35 (MQ=255) cccACATGATGTGGGGGTTTTTTTTATCCTCAAtt < 1:17257602/35‑1 (MQ=255) cccACATGATGTGGGGGGTTTTTTTATCCTCAAtt > 1:8786463/1‑35 (MQ=255) cacaTGATGTGGGGGGTTTTTTTATCCTCAATTTg > 1:3041094/1‑35 (MQ=255) acaTGATGTGGGGGTTTTTTTTATCCTCAATTTGc < 1:897353/35‑1 (MQ=255) gatgtGGGGGTTTTTTTTATCCTCAATTTGCctgc < 1:3415638‑M2/30‑1 (MQ=255) gatgtGGGGGTTTTTTTTATCCTCAATTTGCctgc < 1:16715921‑M2/30‑1 (MQ=255) gatgtGGGGGTTTTTTTTATCCTCAATTTGCctgc < 1:5767242‑M2/30‑1 (MQ=255) atgtGGGGGTTTTTTTTATCCTCAATTTGCctgct > 1:17105610‑M2/5‑35 (MQ=255) gtggGGGTTTTTTTTATCCTCAATTTGCCtgctgc < 1:19635111‑M2/31‑1 (MQ=255) gtggGGGTTTTTTTTATCATCAATTTGCCtgctgc < 1:16248233‑M2/31‑1 (MQ=255) tggGGGTTTTTTTTATCCTCAATTTGCCTgctgct > 1:8507077‑M2/4‑35 (MQ=255) tggGGGTTTTTTTTATCCTCAATTTGCCTgctgct < 1:19123130‑M2/32‑1 (MQ=255) ggGGGTTTTTTTTATCCTCAATTTGCCTGCTGCtt > 1:17447071‑M2/3‑35 (MQ=255) ggGGGTTTTTTTTATCCTCAATTTGCCTGCTGCtt > 1:14564143‑M2/3‑35 (MQ=255) gGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTa > 1:9536837‑M2/2‑35 (MQ=255) gggTTTTTTTTATCCTCAATTTGCCTGCTGCTTaa < 1:2574795/35‑1 (MQ=255) gggTTTNTTTTATCCTCAATTTGCCTGCTGCTTaa > 1:6582475/1‑35 (MQ=255) | AGACACCATCCCTGTCTTCCCCCACATGATGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAA > REL606/4085825‑4085893 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |