New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2962019 = | 71 (0.690) | 12 (0.160) | 4/34 | NT | 19.5% | coding (1189/1278 nt) | yggP | predicted dehydrogenase |
? | REL606 | 3792210 = | 49 (0.670) | coding (316/414 nt) | ECB_03532 | hypothetical protein |
Only 100 of 153 total aligned reads displayed.
GCCTGTTCATTCCAGATGCCGTGCGTTTCCTCAACCAGCCGCGCCAACTCTTTAAACAGCGGATCGGTT > REL606/2961985‑2962053 | gCCTGTTCATTCCAGATGCCGTGCGTTTCCTCAAc > 1:896764/1‑35 (MQ=255) gCCTGTTCATTCCAGATGCCGTGCGTTTCCTCAAc > 1:8321692/1‑35 (MQ=255) gCCTGTTCATTCCAGATGCCGTGCGTTTCCTCAAc > 1:3617524/1‑35 (MQ=255) gCCTGTTCATTCCAGATGCCGTGCGTTTCCTCAAc < 1:2584599/35‑1 (MQ=255) gCCTGTTCATTCCAGATGCCGTGCGTTTCCTCAAc > 1:9410415/1‑35 (MQ=255) gCCTGTTCATTCCAGATGCCGTGCGTTTCCTCAAc < 1:16596899/35‑1 (MQ=255) ctgaaaaataaccatatggatcgatttcccccacc > 1:7544366‑M1/35‑35 (MQ=255) ctgaaaaataaccatatggatcgatttcccccacc < 1:17461139‑M1/1‑1 (MQ=255) ctaaaaaataaccatatggatcgatttcccccacc > 1:11437667‑M1/35‑35 (MQ=255) tggaaaataaccatatggatcgatttcccccaccc < 1:19263989‑M1/2‑1 (MQ=255) ccTGTTCATTCCAGATGCCGTGCGTTTCCTCAAcc > 1:17403112/1‑35 (MQ=255) ccTGTTCATTCCAGATGCCGTGCGTTTCCTCAAcc < 1:1970913/35‑1 (MQ=255) ccTGTTCATTCCAGATGCCGTGCGTTTCCTCAAcc < 1:12042910/35‑1 (MQ=255) ccTGTTCATTCCAGATGCCGTGCGTTTCCTCAAcc < 1:9518187/35‑1 (MQ=255) gaaaaataaccatatggatcgatttcccccaccca > 1:13859242‑M1/33‑35 (MQ=255) gaaaaataaccatatggatagatttcccccaccca > 1:16041226‑M1/33‑35 (MQ=255) cTGTTCATTCCAGATGCCGTGCGTTTCCTCAACCa > 1:20455646/1‑35 (MQ=255) cTGTTCATTCCAGATGCCGTGCGTTTCCTCAACCa < 1:12625865/35‑1 (MQ=255) tGTTCATTCCAGATGCCGTGCGTTTCCTCAACCAg > 1:9220575/1‑35 (MQ=255) tGTTCATTCCAGATGCCGTGCGTTTCCTCAACCAg > 1:18379558/1‑35 (MQ=255) tGTTCATTCCAGATGCCGTGCGTTTCCTCAACCAg > 1:3409069/1‑35 (MQ=255) tGTTCATTCCAGATGCCGTGCGTTTCCTCAACCAg > 1:6666017/1‑35 (MQ=255) tGTTCATTCCAGATGCCGTGCGTTTCCTCAACCAg > 1:12053536/1‑35 (MQ=255) tGTTCATTCCAGATGCCGTGCGTTTCCTCAACCAg < 1:7331470/35‑1 (MQ=255) tGTTCATTCCAGATGCCGTGCGTTTCCTCAACCAg < 1:14840626/35‑1 (MQ=255) tGTTCATTCCAGATGCCGTGCGTTTCCTAAACCAg < 1:5145928/35‑1 (MQ=255) aaaaataaccatatggatcgatttcccccacCCAg < 1:7692850‑M1/4‑1 (MQ=255) gTTCATTCCAGATGCCGTGCGTTTCCTCAACCAGc < 1:15418838/35‑1 (MQ=255) aaaataaccatatggatcgatttcccccacCCAGc < 1:1984745‑M1/5‑1 (MQ=255) aaaataaccatatggatcgatttcccccacCCAGc > 1:1489464‑M1/31‑35 (MQ=255) ttCATTCCAGATGCCGTGCGTTTCCTCAACCAGcc < 1:7300787/35‑1 (MQ=255) ttCATTCCAGATGCCGTGCGTTTCCTCAACCAGcc < 1:3819319/35‑1 (MQ=255) aaataaccatatgtatcgatttcccccacCCAGcc < 1:20097486‑M1/6‑1 (MQ=255) aaataaccatatggatcgatttcccccacCCAgca < 1:15447231‑M1/6‑2 (MQ=255) tCATTCCAGATGCCGTGCGTTTCCTCAACCAGCcg > 1:19603332/1‑35 (MQ=255) aataaccatatggatcgatttcccacacCCAGCcg > 1:7924097‑M1/29‑35 (MQ=255) cATTCCAGATGCCGTGCGTTTCCTCAACCAGCcgc > 1:15680905/1‑35 (MQ=255) cATTCCAGATGCCGTGCGTTTCCTCAACCAGCcgc > 1:2049541/1‑35 (MQ=255) cATTCCAGATGCCGTGCGTTTCCTCAACCAGCcgc > 1:567683/1‑35 (MQ=255) aTTCCAGATGCCGTGCGTTTCCTCAACCAGCcgcg > 1:2767559/1‑35 (MQ=255) ttCCAGATGCCGTGCGTTTCCTCAACCAGCCgcgc > 1:12993592/1‑35 (MQ=255) ttCCAGATGCCGTGCGTTTCCTCAACCAGCCgcgc < 1:6317852/35‑1 (MQ=255) ttCCAGATGCCGTGCGTTTCCTCAACCAGCCgcgc > 1:5718376/1‑35 (MQ=255) tCCAGATGCCGTGCGTTTCCTCAACCAGCCGCGcc > 1:19460118/1‑35 (MQ=255) tCCAGATGCCGTGCGTTTCCTCAACCAGCCGCGcc > 1:18614793/1‑35 (MQ=255) ccAGATGCCGTGCGTTTCCTCAACCAGCCGCGCCa > 1:4670544/1‑35 (MQ=255) cAGATGCCGTGCGTTTCCTCAACCAGCCGCGCCaa > 1:17648839/1‑35 (MQ=255) cAGATGCCGTGCGTTTCCTCAACCAGCCGCGCCaa > 1:15989174/1‑35 (MQ=255) cAGATGCCGTGCGTTTCCTCAACCAGCCGCGCCaa > 1:17257832/1‑35 (MQ=255) aGATGCCGTGCGTTTCCTCAACCAGCCGCGCCAAc > 1:16552645/1‑35 (MQ=255) aGATGCCGTGCGTTTCCTCAACCAGCCGCGCCAAc > 1:6053263/1‑35 (MQ=255) aGATGCCGTGCGTTTCCTCAACCAGCCGCGCCAAc > 1:6249999/1‑35 (MQ=255) gATGCCGTGCGTTTCCTCAACCAGCCGCGCCAAct > 1:2864221/1‑35 (MQ=255) aTGCCGTGCGTTTCCTCAACCAGCCGCGCCAActc > 1:13481827/1‑35 (MQ=255) aTGCCGTGCGTTTCCTCAACCAGCCGCGCCAActc > 1:183427/1‑35 (MQ=255) aTGCCGTGCGTTTCCTCAACCAGCCGCGCCAActc > 1:3768168/1‑35 (MQ=255) aTGCCGTGCGTTTCCTCAACCAGCCGCACAAActc > 1:3024219/1‑35 (MQ=37) tGCCGTGCTTTTCCCCACCCAGCCGCGCCAActct < 1:6039933/35‑1 (MQ=25) tGCCGTGCGTTTCCTCAACCAGCCGCGCCAActct > 1:4258434/1‑35 (MQ=255) tGCCGTGCGTTTCCTCAACCAGCCGCGCCAActct > 1:3980062/1‑35 (MQ=255) gCCGTGCGTTTCCTCAACCAGCCGCGCCAACTCtt > 1:16314449/1‑35 (MQ=255) ccGTGCTTTCCCCCACCCAGCCGCGCCAACTCttt < 1:13493093/35‑1 (MQ=12) ccGTGCGTTTCCTCAACCAGCCGCGCCAACTCttt > 1:14544598/1‑35 (MQ=255) ccGTGCGTTTCCTCAACCAGCCGCGCCAACTCttt > 1:12485527/1‑35 (MQ=255) cGTGCTTTCCCCCACCCAGCCGCGCCAACTCTTTa < 1:20584737/35‑1 (MQ=12) gTGCGTTTCCTCAACCAGCCGCGCCAACTCTTTaa > 1:15582743/1‑35 (MQ=255) gTGCGTTTCCTCAACCAGCCGCGCCAACTCTTTaa > 1:19292432/1‑35 (MQ=255) gTGCGTTTCCCCACCCAGCCGCGCCAACTCTTTaa < 1:12475516/35‑1 (MQ=37) tGCTTTTCCCCACCCAGCCGCGCCAACTCTTTaaa < 1:14489221/35‑1 (MQ=25) tGCTTTTCCCCACCCAGCCGCGCCAACTCTTTaaa < 1:13787472/35‑1 (MQ=25) tGCGTTTCCTCAACCAGCCGCGCCAACTCTTTaaa > 1:17668183/1‑35 (MQ=255) tGCGTTTCCTCAACCAGCCGCGCCAACTCTTTaaa > 1:14284516/1‑35 (MQ=255) tGCGTTTCCTCAACCAGCCGCGCCAACTCTTTaaa > 1:14440053/1‑35 (MQ=255) tGCGTTTCCTCAACCAGCCGCGCCAACTCTTTaaa > 1:19973192/1‑35 (MQ=255) ngCGTTTCCTCAACCAGCCGCGCCAACTCTTTaaa > 1:1758649/2‑35 (MQ=255) gCGTTTCCTCAACCAGCCGCGCCAACTCTTTAAAc > 1:20311610/1‑35 (MQ=255) gCGTTTCCTCAACCAGCCGCGCCAACTCTTTAAAc > 1:13642149/1‑35 (MQ=255) gCGTTTCCCCACCCAGCCGCGCCAACTCTTTAAAc < 1:7133535/35‑1 (MQ=37) cttttccccacCCAGCCGCGCCAACTCTTTAAACa > 1:1441835‑M1/12‑35 (MQ=255) cttttCCTCCCCCAGCCGCGCCAACTCTTTAAACa < 1:13097377/33‑1 (MQ=25) tttcccccacCCAGCCGCGCCAACTCTTTAAACAg > 1:1758478‑M1/11‑35 (MQ=255) gTTTCCTCAACCAGCCGCGCCAACTCTTTAAACAg > 1:14309232/1‑35 (MQ=255) gTTTCCTCAACCAGCCGCGCCAACTCTTTAAACAg > 1:1734813/1‑35 (MQ=255) tttCCTTAACCAGCCGCGCCAACTCTTTAAACAGc > 1:10970080/1‑35 (MQ=255) tttCCTCAACCAGCCGCGCCAACTCTTTAAACAGc > 1:18780732/1‑35 (MQ=255) ttcccccccCCAGCCGCGCCAACTCTTTAAACAGc > 1:10601733‑M1/10‑35 (MQ=255) ttcccccacCCAGCCGCGCCAACTCTTTAAACAGc > 1:5185258‑M1/10‑35 (MQ=255) ttCCTCAACCAGCCGCGCCAACTCTTTAAACAGCg > 1:10821294/1‑35 (MQ=255) ttCCTCAACCAGCCGCGCCAACTCTTTAAACAGCg > 1:7558232/1‑35 (MQ=255) ttCCTCAACCAGCAGCGCCAACTCTTTAAACAGCg < 1:20487726/35‑1 (MQ=255) cccccacCCAGCCGCGCCAACTCTTTAAACAGCgg > 1:3095025‑M1/8‑35 (MQ=255) cTCAACCAGCCGCGCCAACTCTTTAAACAGCGGAt > 1:6502932/1‑35 (MQ=255) tCAACCAGCCGCGCCAACTCTTTAAACAGCGGATc > 1:3825905/1‑35 (MQ=255) ccccCCAGCCGCGCCAACTCTTTAAACAGCGGATc > 1:12625255‑M1/5‑35 (MQ=255) cccccAGCCGCGCCAACTCTTTAACCAGCGGATCg < 1:865903/32‑1 (MQ=37) cAACCAGCCGCGCCAACTCTTTAAACAGCGGATCg > 1:9614115/1‑35 (MQ=255) cAACCAGCCGCGCCAACTCTTTAAACAGCGGATCg > 1:10414855/1‑35 (MQ=255) aaCCAGCCGCGCCAACTCTTTAAACAGCGGATCgg > 1:3890869/1‑35 (MQ=255) aCCAGCCGCGCCAACTCTTTAAACAGCGGATCggg > 1:11249453/1‑34 (MQ=255) CCAGCCGCGCCAACTCTTTAAACAGCGGAtcgggg < 1:2347085‑M1/35‑3 (MQ=255) | GCCTGTTCATTCCAGATGCCGTGCGTTTCCTCAACCAGCCGCGCCAACTCTTTAAACAGCGGATCGGTT > REL606/2961985‑2962053 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |