New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 82013 = | 70 (0.680) | 10 (0.160) | 3/30 | NT | 19.5% | coding (245/606 nt) | leuD | isopropylmalate isomerase small subunit |
? | REL606 | 3792209 = | 39 (0.610) | coding (315/414 nt) | ECB_03532 | hypothetical protein |
ATCAGGGCGCTTCCATTTTGCTGGCACGAGAAAACTTCGGCTG‑‑‑‑‑‑‑‑‑ < REL606/82055‑82013 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcggctgGGTGGGGGA > REL606/3792209‑3792217 ATCAGTGCGCTTCCATTTTGCTGGCACGAGAAAAC > 1:15311420/1‑35 ATCAGGGCGCTTCCATTTTGCTGGCACGAGAAAAC > 1:8132901/1‑35 ATCAGGGCGCTTCCATTTTGCTGGCACGAGAAAAC > 1:2317190/1‑35 ATCAGGGCGCTTCCATTTTGCTGGCACGAGAAAAC > 1:8270531/1‑35 ATCAGGGCGCTTCCATTTTGCTGGCACGAGAAAAC < 1:17387250/35‑1 ATCAGGGCGCTTCCATTTTGCTGGCACGAGAAAAC < 1:16874735/35‑1 ATCAGGGCGCTTCCATTTTGCTGGCACGAGAAAAC < 1:15692224/35‑1 ATCAGGGCGCTTCCATTTTGCTGGCACGAGAAAAC > 1:13040350/1‑35 ATCAGGGCGCTTCCATTTTGCTGGCACGAGAAAAC > 1:12413626/1‑35 TCAGGGCGCTTCCATTTTGCTGGCACGAGAAAACT > 1:17539658/1‑35 TCAGGGCGCTTCCATTTTGCTGGCACGAGAAAACT < 1:2496046/35‑1 TCAGGGCGCTTCCATTTTGCTGGCACGAGAAAACT < 1:7972499/35‑1 TCAGGGCGCTTCCATTTTGCTGGCACGAGAAAACT > 1:15741644/1‑35 TCAGGGCGCTTCCATTTTGCTGGCACGAGAAAACT < 1:13960695/35‑1 TCAGGGCGCTTCCATTTTGCTGGCACGAGAAAACT > 1:4060093/1‑35 TCAGGGCGCTTCCATTTTGCTGGCACGAGAAAACT > 1:5344391/1‑35 TCAGGGCGCTTCCATTTTGCTGGCAAGAGAAAACT < 1:10712027/35‑1 CAGGGCGCTTCCATTTTGCTGGCACGAGAAAACTT < 1:10059927/35‑1 CAGGGCGCTTCCATTTTGCTGGCACGAGAAAACTT < 1:8245658/35‑1 CAGGGCGCTTCCATTTTGCTGGCACGAGAAAACTT < 1:18113197/35‑1 CAGGGCGCTTCCATTTTGCTGGCACGAGAAAACTT > 1:4645209/1‑35 CAGGGCGCTTCCATTTTGCTGGCACGAGAAAACTT < 1:13558371/35‑1 CAGGGCGCTTCCATTTTGCTGGCACGAGAAAACTT < 1:8482397/35‑1 CAGGGCGCTTCCATTTTGCTGGCACGAGAAAACTT > 1:366018/1‑35 CAGGGCGCTTCCATTTTGCTGGCACGAGAAAACTT > 1:5950785/1‑35 AGGGCGCTTCCATTTTGCTGGCACGAGAAAACTTC < 1:6049183/35‑1 AGGGCGCTTCCATTTTGCTGGCACGAGAAAACTTC > 1:17245292/1‑35 AGGGCGCTTCCATTTTGCTGGCACGAGAAAACTTC < 1:7135025/35‑1 AGGGCGCTTCCATTTTGCTGGCACGAGAAAACTTC < 1:18939760/35‑1 AGGGCGCTTCCATTTTGCTGGCACGAGAAAACTTC < 1:6680826/35‑1 AGGGCGCTTCCATTTTGCTGGCACGACAAAACTTC > 1:11912582/1‑35 AGGGCGCTTCCATTTCGCTGGCACGAGAAAACTTC > 1:6077688/1‑35 GGGCGCTTCCATTTTGCTGGCACGAGAAAACTTCG > 1:19313335/1‑35 GGGCGCTTCCATTTTGCTGGCACGAGAAAACTTCG > 1:5941049/1‑35 GGGCGCTTCCATTTTGCTGGCACGAGAAAACTTCG > 1:7926864/1‑35 GGGCGCTTCCATTTTGCTGGCACGAGAAAACTTCG < 1:286081/35‑1 GGCGCTTCCATTTTGCTGGCACGAGAAAACTTCGG < 1:11367848/35‑1 GGCGCTTCCATTTTGCTGGCACGAGAAAACTTCGG < 1:11923141/35‑1 GGCGCTTCCATTTTGCTGGCACGAGAAAACTTCGG < 1:4540233/35‑1 GGCGCTTCCATTTTGCTGGCACGAGAAAACTTCGG > 1:4108523/1‑35 GGCGCTTCCATTTTGCTGGCACGAGAAAACTTCGG < 1:17068752/35‑1 GCGCTTCCATTTTGCTGGCACGAGAAAACTTCGGC > 1:18552558/1‑35 CGCTTCCATTTTGCTGGCACGAGAAACCTTCGGCT < 1:284561/35‑1 CGCTTCCATTTTGCTGGCACGAGAAAACTTCGGCT > 1:19943147/1‑35 CGCTTCCATTTTGCTGGCACGAGAAAACTTCGGCT > 1:12170849/1‑35 CGCTTCCATTTTGCTGGCACGAGAAAACTTCGGCT > 1:5657788/1‑35 CGCTTCCATTTTGCTGGCACGAGAAAACTTCGGCT > 1:668685/1‑35 CGCTTCCATTTTGCTGGCACGAGAAAACTTCGGCT > 1:13049587/1‑35 CGCTTCCATTTTGCTGGCACGAGAAAACTTCGGCT > 1:13528059/1‑35 CGCTTCCATTTTGCTGGCACGAGAAAACTTCGGCT < 1:15561723/35‑1 CGCTTCCATTTTGCTGGCACGAGAAAACTTCGGCT < 1:1597175/35‑1 GCTTCCATTTTGCTGGCACGAGAAAACTTCGGCTG > 1:5254435/1‑35 GCTTCCATTTTGCTGGCACGAGAAAACTTCGGCTG > 1:13598698/1‑35 GCTTCCATTTTGCTGGCACGAGAAAACTTCGGCTG > 1:7980116/1‑35 GCTTCCATTTTGCTGGCACGAGAAAACTTCGGCTG > 1:20221510/1‑35 GCTTCCATTTTGCTGGCACGAGAAAACTTCGGCTG > 1:2972325/1‑35 CTTCCATTTTGCTGGCACGAGAAAACTTCGGCTGG > 1:2336841/1‑35 CTTCCATTTTGCTGGCACGAGAAAACTTCGGCTGG > 1:918764/1‑35 CTTCCATTTTGCTGGCACGAGAAAACTTCGGCTGG > 1:16785434/1‑35 TTCCATTTTGCTGGCACGAGAAAACTTCGGCTGGG > 1:2513761/1‑35 TCCATTTTGCTGGCACGAGAAAACTTCGGCTGGGg > 1:9638748/1‑34 TCCATTTTGCTGGCACGAGAAAACTTCGGCTGGGg > 1:786004/1‑34 CATTTTGCTGGCACGAGAAAACTTCGGCTGGGgcg > 1:1234235/1‑32 CATTTTGCTGGCACGAGAAAACTTCGGCTGGGGGG > 1:3844906/1‑35 ATTTTGCTGGCACGAGAAAACTTCGGCTGGGGGGc > 1:1756571/1‑34 ATTTTGCTGGCACGAGAAAACTTCGGCTGGGGGGc > 1:18153296/1‑34 ATTTTGCTGGCACGAGAAAACTTCGGCTGGGGGGG > 1:19010381/1‑35 ATTTTGCTGGCACGAGAAAACTTCGGCTGGGGGGG > 1:3322749/1‑35 ATTTTGCTGGCACGAGAAAACTTCGGCTGGGGGGG > 1:5622200/1‑35 TTTTGCTGGCACGAGAAAACTTCGGCTGGGGGGGc > 1:835127/1‑34 TTTTGCTGGCACGAGAAAACTTCGGCTGGGGGGGG > 1:7376667/1‑35 TTTTGCTGGCACGAGAAAACTTCGGCTGGGGGGGG > 1:9385579/1‑35 TTTGCTGGCACGAGAAAACTTCGGCTGGGGGGGGc > 1:5673042/1‑34 TTTGCTGGCACGAGAAAACTTCGGCTGGGGGGGGG > 1:8243624/1‑35 TTTGCTGGCACGAGAAAACTTCGGCTGGGGGGGGG > 1:16490765/1‑35 TTGCTGGCACGAGAAAACTTCGGCTGGGGGGGGGc > 1:3193025/1‑34 ATCAGGGCGCTTCCATTTTGCTGGCACGAGAAAACTTCGGCTG‑‑‑‑‑‑‑‑‑ < REL606/82055‑82013 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcggctgGGTGGGGGA > REL606/3792209‑3792217 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |