Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 2,122,426 | IS150 (–) +3 bp | 46.2% | coding (198‑200/216 nt) | ECB_02013 ← | conserved hypothetical protein; putative exported protein |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2122426 = | 47 (0.520) | 48 (0.470) | 32/48 | NT | 47.2% | coding (200/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein |
? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 2122428 | 46 (0.540) | 32 (0.320) | 21/46 | NT | 37.7% | coding (198/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein |
? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
TCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC > REL606/2774401‑2774466 | tCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGtt > 1:15291188/1‑35 (MQ=255) tCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGtt < 1:2210596/35‑1 (MQ=255) tCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGtt < 1:3309396/35‑1 (MQ=255) cGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTg > 1:15223589/1‑35 (MQ=255) cGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTg > 1:3944813/1‑35 (MQ=255) gAATTGTTTGGGTTCGAACGTAATCCTCAGGTTGt > 1:15535875/1‑35 (MQ=255) gAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGt < 1:1486445/35‑1 (MQ=255) aaTTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTa > 1:19956087/1‑35 (MQ=255) aTTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTAc < 1:4283908/35‑1 (MQ=255) ttGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACt < 1:3483668/35‑1 (MQ=255) ttGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACt < 1:9992954/35‑1 (MQ=255) gTTTGGGTTCGAACGTAAGCCTCATGTTGTACTGa > 1:11694488/1‑35 (MQ=255) gTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGa < 1:7945340/35‑1 (MQ=255) gTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGa > 1:8197683/1‑35 (MQ=255) tttGGGTTCGAACGTAAGCCTCAGGTTGTACTGAc > 1:12699449/1‑35 (MQ=255) ttGGGTTCGAACGTAAGCCTCAGGTTGTACTGAcc < 1:7438969/35‑1 (MQ=255) tGGGTTCGAACGTAAGCCTCAGGTTGTACTGAccc < 1:19879378/35‑1 (MQ=255) tGGGTTCGAACGTAAGACTCAGGTTGTACTGAccc < 1:2405461/35‑1 (MQ=255) gggTTCGAACGTAAGCCTCAGGTTGTACTGAcccc > 1:2119914/1‑35 (MQ=255) gggTTCGAACGTAAGCCTCAGGTTGTACTGAcccc > 1:6136335/1‑35 (MQ=255) gggTTCGAACGTAAGCCTCAGGTTGTACTGAcccc > 1:6488589/1‑35 (MQ=255) gagTTCGAACGTAAGCCTCAGGTTGTACTGAcccc > 1:16452124/3‑35 (MQ=255) ggTTCGAACGTAAGCCTCAGGTTGTACTGCCCCCa > 1:13418134/1‑35 (MQ=255) ggTTCGAACGTAAGCCTCAGGTTGTACTGACCCCa > 1:9274143/1‑35 (MQ=255) ggTTCGAACGTAAGCCTCAGGTTGTACTGACCCCa < 1:2696803/35‑1 (MQ=255) gTTCGAACGTAAGCCTCAGGTTGTACTGACCCCaa < 1:18763331/35‑1 (MQ=255) gTTCGAACGTAAGCCTCAGGTTGTACTGACCCCaa < 1:2780425/35‑1 (MQ=255) gTTCGAACGTAAGCCTCAGGTTGTACTGACCCCaa < 1:18408159/35‑1 (MQ=255) ttCGAACGTAAGCCTCAGGTTGTACTGACCCCaaa < 1:16990001/35‑1 (MQ=255) ttCGAACGTAAGCCTCAGGTTGTACTGACCCCaaa < 1:11839631/35‑1 (MQ=255) ttCGAACATAAGCCTCAGGTTGTACTGACCCCaaa < 1:13898885/35‑1 (MQ=255) tCGAACGTAAGCCTCAGGTTGTACTGACCCCaaaa < 1:18138053/35‑1 (MQ=255) tCGAACGTAAGCCTCAGGTTGTACTGACCCCaaaa < 1:8433589/35‑1 (MQ=255) tCGAACGTAAGCCTCAGGTTGTACTGACCCCaaaa < 1:17346656/35‑1 (MQ=255) tCGAACGTAAGCCTCAGGTTGTACTGACCCCaaaa < 1:6671386/35‑1 (MQ=255) gAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAg < 1:19188462/35‑1 (MQ=255) aaCGTAAGCCTCAGGTTGTACTGACCCCAAAAAGt < 1:6691835/35‑1 (MQ=255) aCGTAAGCCTCAGGTTGTACTGACCCCAAAAAGtt > 1:12440701/1‑35 (MQ=255) aCGTAAGCCTCAGGTTGTACTGACCCCAAAAAGtt < 1:13465198/35‑1 (MQ=255) aCGTAAGCCTCAGGTTGTACTGACCCCAAAAAGtt > 1:7326415/1‑35 (MQ=255) cGTAAGGCTCAGGTTGTACTGACCCCAAAAAGTTg < 1:46449/35‑1 (MQ=255) cGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTg > 1:2027020/1‑35 (MQ=255) cGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTg > 1:10321675/1‑35 (MQ=255) cGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTg > 1:19573981/1‑35 (MQ=255) cGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTg > 1:16744919/1‑35 (MQ=255) cGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTg < 1:17648943/35‑1 (MQ=255) agaaaGCCTTAAGTTGTACTGACCCCAAAAAGTTg > 1:1888867/4‑35 (MQ=14) gTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTgg > 1:2005779/1‑35 (MQ=255) gTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTgg > 1:1961180/1‑35 (MQ=255) gTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTgg < 1:484533/35‑1 (MQ=255) gTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTgg > 1:8490941/1‑35 (MQ=255) tAAGCCTCAGGTTGTACTGACTCCAAAAAGTTGGa > 1:20408058/1‑35 (MQ=255) tAAGCCTCAGGTTGTACTGACCCCAAAAAGTTgta > 1:13229419/1‑33 (MQ=255) tAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGa > 1:9014249/1‑35 (MQ=255) tAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGa < 1:3486985/35‑1 (MQ=255) tAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGa < 1:132349/35‑1 (MQ=255) aaGCCTCAGGTTGTACTGACCCCAAAAAGTTGGAc > 1:4473036/1‑35 (MQ=255) aaGCCTCAGGTTGTACTGACCCCAAAAAGTTGGAc < 1:2378917/35‑1 (MQ=255) aGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACa < 1:12748735/35‑1 (MQ=255) aGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACa < 1:9969930/35‑1 (MQ=255) aGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACa > 1:8672035/1‑35 (MQ=255) aGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACa < 1:13519110/35‑1 (MQ=255) gCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAg > 1:17224741/1‑35 (MQ=255) ccTCAGGTTGTACTGACCCCAAAAAGTTGGACAGt > 1:3856097/1‑35 (MQ=255) ccTCAGGTTGTACTGACCCCAAAAAGTTGGACAGt > 1:2934995/1‑35 (MQ=255) cTCAGGTTGTACTGACCCCAAAAAGTTGGACAGtt < 1:18980006/35‑1 (MQ=255) cTCAGGTTGTACTGACCCCAAAAAGTTGGACAGtt < 1:9416747/35‑1 (MQ=255) cTCAGGTTGTACTGACCCCAAAAAGTTGGACAGtt > 1:11000162/1‑35 (MQ=255) tCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTa < 1:6704046/35‑1 (MQ=40) tCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTa > 1:7190891/1‑35 (MQ=40) tCAGGTTGTACTGAACCCAAAAAGTTGGACAGTTa < 1:10173495/35‑1 (MQ=255) cAGGTTGTACTGACCCCAAAAAGTTGGACAGTTaa < 1:7006779/35‑1 (MQ=38) cAGGTTGTACTGACCCCAAAAAGTTGGACAGTTaa < 1:2124539/35‑1 (MQ=38) cAGGTTGTACTGACCCCAAAAAGTTGGACAGTTaa > 1:18451878/1‑35 (MQ=38) cAGGTTGTACTGACCCCAAAAAGTTGGACAGTTaa < 1:1699818/35‑1 (MQ=38) aGGTTGTACTGACCCCAAAAAGTTGGACAGTTaaa > 1:5612761/1‑35 (MQ=38) aGGTTGTACTGACCCCAAAAAGTTGGACAGTTaaa < 1:8165942/35‑1 (MQ=38) aGGTTGTACTGACCCCAAAAAGTTGGACAGTTaaa > 1:17565291/1‑35 (MQ=38) aGGTTGTACTGACCCCAAAAAGTTGGACAGTTaaa > 1:14780837/1‑35 (MQ=38) aGGTTGTACTGACCCCAAAAAGTTGGACAGTTaaa < 1:11892964/35‑1 (MQ=38) aGGTTGTACTCACCCCAAAAAGTTGGACAGTTaaa > 1:13995479/1‑35 (MQ=255) ggTTGTACTGACCCCAAAAAGTTGGACAGTTAAac > 1:200083/1‑35 (MQ=35) ggTTGTACTGACCCCAAAAAGTTGGACAGTTAAac < 1:14247979/35‑1 (MQ=35) | TCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC > REL606/2774401‑2774466 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |