New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 114196 = | 59 (0.570) | 12 (0.130) | 3/42 | NT | 17.6% | coding (349/390 nt) | mutT | nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP |
? | REL606 | 422596 = | 61 (0.680) | intergenic (‑283/+179) | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
GACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG‑‑‑‑‑‑‑‑‑‑‑ < REL606/114232‑114196 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggGGGGGAAAATA > REL606/422596‑422606 GACGTTTAAGCTTCGCAATTACCGGTTCATTGGCT > 1:6571459/1‑35 GACGTTTAAGCTTCGCAATTACCGGTTCATTGGCT > 1:19571440/1‑35 GACGTTTAAGCTTCGCAATTACCGGTTCATTGGCT < 1:1445705/35‑1 ACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTG < 1:10599557/35‑1 ACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTG < 1:1220334/35‑1 ACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTG > 1:5512003/1‑35 ACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTG > 1:14134698/1‑35 ACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTG < 1:14529189/35‑1 CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG > 1:1724160/1‑35 CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG > 1:15977350/1‑35 CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG > 1:17349502/1‑35 CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG > 1:18438507/1‑35 CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG > 1:2796240/1‑35 CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG > 1:317525/1‑35 CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG < 1:4537648/35‑1 CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG > 1:11708884/1‑35 CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG > 1:10282235/1‑35 CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG < 1:9337660/35‑1 CGTTTAAGCGTCGCAATTACCGGTTCATTGGCTGG < 1:1468958/35‑1 GTTTAAGCTTCGCAATTACCTGTTCATTGGCTGGG > 1:6066771/1‑35 GTTTAAGCTTCGCAATTACCGGTTCATTGGCTGGG > 1:17251706/1‑35 GTTTAAGCTTCGCAATTACCGGTTCATTGGCTGGG > 1:10067695/1‑35 TTTAAGCTTCGCAATTACCGGTTCATTGGCTGGGG > 1:15353846/1‑35 TTAAGCTTCGCAATTACCGGTTCATTGGCTGGGGG > 1:18020683/1‑35 TTAAGCTTCGCAATTACCGGTTCATTGGCTGGGGG > 1:2000004/1‑35 TTAAGCTTCGCAATTACCGGTTCATTGGCTGGGGG > 1:14507673/1‑35 TTAAGCTTCGCAATTACCGGTTCATTGGCTGGGGG > 1:10255445/1‑35 TAAGCTTCGCAATTACCGGTTCATTGGCTGGGGGG > 1:13163441/1‑35 AAGCTTCGCAATTACCGGTTCATTGGCTGGGGGGG > 1:1462721/1‑35 AGCTTCGCAATTACCGGTTCATTGGCTGGGGGGGg > 1:17874671/1‑34 AGCTTCGCAATTACCGGTTCATTGGCTGGGGGGGA > 1:17475719/1‑35 AGCTTCGCAATTACCGGTTCATTGGCTGGGGGGGA > 1:14761675/1‑35 AGCTTCGCAATTACCGGTTCATTGGCTGGGGGGGA > 1:4318077/1‑35 GCTTCGCAATTACCGGTTCATTGGCTGGGGGGGga > 1:474097/1‑33 CTTCGCAATTACCGGTTCATTGGCTGGGGGGGAAA > 1:7647681/1‑35 TTCGCAATTACCGGTTCATTGGCTGGGGGGGGAAc > 1:7650518/1‑34 TTCGCAATTACCGGTTCATTGGCTGGGGGGGGAAc > 1:4290039/1‑34 TTCGCAATTACCGGTTCATTGGCTGGGGGGGAAAA > 1:15502604/1‑35 TCGCAATTACCGGTTCATTGGCTGGGGGGGGAAAa > 1:789941/1‑34 TCGCAATTACCGGTTCATTGGCTGGGGGGGAAAca > 1:14890267/1‑33 CGCAATTACCGGTTCATTGGCTGGGGGGGAAAcaa > 1:13940800/1‑32 CGCAATTACCGGTTCATTGGCTGGGGGGGAAAAaa > 1:14204363/1‑33 CGCAATTACCGGTTCATTGGCTGGGGGGGAAAAaa > 1:19085543/1‑33 GACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG‑‑‑‑‑‑‑‑‑‑‑ < REL606/114232‑114196 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggGGGGGAAAATA > REL606/422596‑422606 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |