New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1774429 | 43 (0.420) | 8 (0.090) | 4/40 | NT | 14.3% | coding (783/2388 nt) | pheT | phenylalanyl‑tRNA synthetase beta subunit |
? | REL606 | = 2595910 | 60 (0.700) | coding (551/1062 nt) | yphC | predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding |
CTTCAATGCGATCTTTATCGAAAGCGTGCATCGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1774392‑1774429 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggGGCCGGTCGGCATGATGGCGATGATGCTGGCGAA < REL606/2595910‑2595877 CTTCAATGCGATCTTTATCTAAAGCGTGCATCGGC > 1:18271517/1‑35 CTTCAATGCGATCTTTATCGAAAGCGTGCATCGGC > 1:10006281/1‑35 CTTCAATGCGATCTTTATCGAAAGCGTGCATCGGC < 1:16531645/35‑1 CTTCAATGCGATCTTTATCGAAAGCGTGCATCGGC > 1:16863264/1‑35 CTTCAATGCGATCTTTATCGAAAGCGTGCATCGGC > 1:7167261/1‑35 CTTCAATGCGATCTTTATCGAAAGCGTGCATCGGC > 1:18032647/1‑35 CTTCAATGCGATCTTTATCGAAAGCGTGCATCGGC < 1:9482085/35‑1 CTTCAATGCGATCTTTATCGAAAGCGTGCATCGGC > 1:19490546/1‑35 TTCAATGCGATCTTTATCGAAAGCGTGCATCGGCT < 1:5900771/35‑1 TTCAATGCGATCTTTATCGAAAGCGTGCATCGGCT < 1:19356871/35‑1 TTCAATGCGATCTTTATCGAAAGCGTGCATCGGCT < 1:9657732/35‑1 TTCAATGCGATCTTTATCGAAAGCGTGCATCGGCT < 1:11083826/35‑1 TTCAATGCGATCTTTATCGAAAGCGTGCATCGGCT > 1:293930/1‑35 TCAATGCGATCTTTATCGAAAGCGTGCATCGGCTG > 1:8992540/1‑35 CAATGCGATCTTTATCGAAAGCGTGCATCGGCTGG < 1:19991068/35‑1 CAATGCGATCTTTATCGAAAGCGTGCATCGGCTGG < 1:8450383/35‑1 CAATGCGATCTTTATCGAAAGCGTGCATCGGCTGG < 1:12979658/35‑1 CAATGCGATCTTTATCGAAAGCGTGCATCGGCTGG > 1:718152/1‑35 CAATGCGATCTTTATCGAAAGCGTGCATCGGCTGG > 1:7445544/1‑35 AATGCGATCTTTATCGAAAGCGTGCATCGGCTGGG > 1:20276736/1‑35 AATGCGATCTTTATCGAAAGCGTGCATCGGCTGGG > 1:15122842/1‑35 AATGCGATCTTTATCGAAAGCGTGCATCGGCTGGG > 1:11160338/1‑35 AATGCGATCTTTATCGAAAGCGTGCATCGGCTGGG > 1:7919196/1‑35 AATGCGATCTTTATCGAAAGCGTGCATCGGCTGGG > 1:14161753/1‑35 AATGCGATCTTTATCGAAAGCGTGCATCGGCTGGG > 1:1157368/1‑35 ATGCGATCTTTATCGAAAGCGTGCATTGGCTGGGG > 1:14444730/1‑35 ATGCGATCTTTATCGAAAGCGTGCATCGGCTGGGc > 1:14953498/1‑34 ATGCGATCTTTATCGAAAGCGTGCATCGGCTGGGG > 1:19607030/1‑35 TGCGATCTTTATCGAAAGCGTGCATCGGCTGGGcc > 1:10067001/1‑33 TGCGATCTTTATCGAAAGCGTGCATCGGCTGGGGg > 1:16762365/1‑34 GCGATCTTTATCGAAAGCGTGCATCGGCTGGGGCg > 1:5716693/1‑34 GCGATCTTTATCGAAAGCGTGCATCGGCTGGGGCg > 1:19033125/1‑34 GCGATCTTTATCGAAAGCGTGCATCGGCTGGGGCg > 1:12213351/1‑34 GCGATCTTTATCGAAAGCGTGCATCGGCTGGGGCC > 1:15012455/1‑35 CGATCTTTATCGAAAGCGTGCATCGGCTGGGGCCG > 1:3966051/1‑35 GATCTTTATCGAAAGCGTGCATCGGCTGGGGCGGG > 1:1208349/1‑35 ATCTTTATCGAAAGCGTGCATCGGCTGGGGCGGGg > 1:6852737/1‑34 ATCTTTATCGAAAGCGTGCATCGGCTGGGCCCGGT > 1:12593048/1‑35 CTTTATCGAAAGCGTGCATCGGCTGGGGGCGGTCG > 1:15869106/1‑35 CTTTATCGAAAGCGTGCATCGGCTGGGGCCGGTCG > 1:8516287/1‑35 TTTATCGAAAGCGTGCATCGGCTGGGGCCGGTCGG > 1:9919687/1‑35 TTTATCGAAAGCGTGCATCGGCTGGGGCCGGTCGG > 1:4390020/1‑35 TTATCGAAAGCGTGCATCGGCTGGGGCCGGTCGGg > 1:11291789/1‑34 CTGGGGCCGGTCGGCGTGATGGCGATGATGCTGGC < 1:15268549/35‑1 CTGGGGCCGGTCGGCGTGATGGCGATGATGCTGGC < 1:11373628/35‑1 CTGGGGCCGGTCGGCATGATGGCGATGATGCTGGC < 1:19877588/35‑1 CTGGGGCCGGTCGGCATGATGGCGATGATGCTGGC < 1:18869087/35‑1 CTGGGGCCGGTCGGCATGATGGCGATGATGCTGGC < 1:15316427/35‑1 CTGGGGCCGGTCGGCATGATGGCGATGATGCTGGC > 1:783797/1‑35 CTGGGGCCGGTCGGCATGATGGCGATGATGCTGGC < 1:12690644/35‑1 CTGGGGCCGGTCGGCATGATGGCGATGATGCTGGC > 1:11973439/1‑35 TGGGGCCGGTCGGCATGATGGCGATGATGCTGGCG > 1:18159654/1‑35 TGGGGCCGGTCGGCATGATGGCGATGATGCTGGCG < 1:17601995/35‑1 TGGGGCCGGTCGGCATGATGGCGATGATGCTGGCG < 1:11533596/35‑1 GGGCCGGTCGGCATGATGGCGATGATGCTGGCGAA > 1:5315485/1‑35 GGGCCGGTCGGCATGATGGCGATGATGCTGGCGAA < 1:14849992/35‑1 GGGCCGGTCGGCATGATGGCGATGATGCTGGCGAA < 1:12168262/35‑1 GGGCCGGTCGGCATGATGGCGATGATGCTGGCGAA < 1:5283613/35‑1 GGGCAGGTCGGCATGATGGCGATGATGCTGGCGAA < 1:6381408/35‑1 CTTCAATGCGATCTTTATCGAAAGCGTGCATCGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1774392‑1774429 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggGGCCGGTCGGCATGATGGCGATGATGCTGGCGAA < REL606/2595910‑2595877 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |