New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1723584 = | 50 (0.490) | 4 (0.050) | 3/36 | NT | 6.2% | intergenic (‑190/‑118) | ydhQ/valV | hypothetical protein/tRNA‑Val |
? | REL606 | = 2780594 | 110 (1.070) | intergenic (‑196/‑120) | cysJ/ygcM | sulfite reductase, alpha subunit, flavoprotein/6‑pyruvoyl tetrahydrobiopterin synthase (PTPS) |
Only 100 of 163 total aligned reads displayed.
AACAAAATAGATTAACCAACCTAATGAAAAACAAATGAATTTAGCCAATCATTAAGATAAATCAGCGAT > REL606/2780560‑2780628 | aacaaAATAGATTAACCAACCTAATGAAAAACaaa < 1:13627486/35‑1 (MQ=255) aacaaAATAGATTAACCAACCTAATGAAAAACaaa > 1:12828688/1‑35 (MQ=255) aaaaTAGATTAACCAACCTAATGAAAAACAAATGa > 1:15495744/1‑35 (MQ=255) aaaaTAGATTAACCAACCTAATGAAAAACAAATGa > 1:16718341/1‑35 (MQ=255) aaaaTAGATTAACCAACCTAATGAAAAACAAATGa > 1:596436/1‑35 (MQ=255) aaaTAGATTAACCAACCTAATGAAAAACAAATGaa > 1:15667591/1‑35 (MQ=255) aaaTAGATTAACCAACCTAATGAAAAACAAATGaa < 1:4682831/35‑1 (MQ=255) aaTAGATTAACCAACCTAATGAAAAACAAATGAAt > 1:11563681/1‑35 (MQ=255) aaTAGATTAACCAACCTAATGAAAAACAAATGAAt < 1:18513217/35‑1 (MQ=255) aTAGATTAACCAACCTAATGAAAAACAAATGAAtt > 1:5686887/1‑35 (MQ=255) aTAGATTAACCAACCTAATGAAAAACAAATGAAtt < 1:17977975/35‑1 (MQ=255) aTAGATTAACCAACCTAATGAAAAACAAATGAAtt > 1:11059156/1‑35 (MQ=255) aTAGATTAACCAACCTAATGAAAAACAAATGAAtt < 1:19923890/35‑1 (MQ=255) tAGATTAACCAACCTAATGAAAAACAAATGAAttt > 1:5854008/1‑35 (MQ=255) tAGATTAACCAACCTAATGAAAAACAAATGAAttt > 1:18301685/1‑35 (MQ=255) aGATTAACCAACCTAATGAAAAACAAATGAATTTa > 1:2605505/1‑35 (MQ=255) aGATTAACCAACCTAATGAAAAACAAATGAATTTa < 1:20227259/35‑1 (MQ=255) aGATTAACAAACCTAATGAAAAACAAATGAATTTa < 1:13654724/35‑1 (MQ=255) gATTAACCAACCTAATGAAAAACAAATGAATTTAg < 1:4335241/35‑1 (MQ=255) gATTAACCAACCTAATGAAAAACAAATGAATTTAg < 1:11783891/35‑1 (MQ=255) aTTAACCAACCTAATGAAAAACAAATGAATTTAGc > 1:17861580/1‑35 (MQ=255) aTTAACCAACCTAATGAAAAACAAATGAATTTAGc > 1:18638906/1‑35 (MQ=255) ttAACCAACCTAATGAAAAACAAATGAATTTAGcc > 1:9589642/1‑35 (MQ=255) tAACCAACCTAATGAAAAACAAATGAATTTAGCCa > 1:18033457/1‑35 (MQ=255) tAACCAACCTAATGAAAAACAAATGAATTTAGCCa < 1:4099926/35‑1 (MQ=255) tAACCAACCTAATGAAAAACAAATGAATTTAGCCa > 1:5393973/1‑35 (MQ=255) aaccaaccTAATGAAAAACAAATGAATTTAGCCaa < 1:2378093/35‑1 (MQ=255) accaaccTAATGAAAAACAAATGAATTTAGCCAAt > 1:18782281/1‑35 (MQ=255) accaaccTAATGAAAAACAAATGAATTTAGCCAAt > 1:705337/1‑35 (MQ=255) ccaaccTAATGAAAAACAAATGAATTTAGCCAATc < 1:8760463/35‑1 (MQ=255) ccaaccTAATGAAAAACAAATGAATTTAGCCAATc > 1:4765506/1‑35 (MQ=255) caaccTAATGAAAAACAAATGAATTTAGCCAATCa < 1:7091555/35‑1 (MQ=255) naccTNNTGAAAAACAAATGAATTTAGCCAATCAt < 1:19170350/34‑1 (MQ=255) aaccTAATGAAAAACAAATGAATTTAGCCAATCAt > 1:17252225/1‑35 (MQ=255) aaccTAATGAAAAACAAATGAATTTAGCCAATCAt > 1:17485801/1‑35 (MQ=255) aaccTAATGAAAAACAAATGAATTTAGCCAATCAt < 1:12079630/35‑1 (MQ=255) accTAATGAAAAACAAATGAATTTAGCCAATCAtt < 1:3036083/35‑1 (MQ=255) accTAATGAAAAACAAATGAATTTAGCCAATCAtt > 1:2242245/1‑35 (MQ=255) accTAATGAAAAACAAATGAATTTAGCCAATCAtt < 1:3845987/35‑1 (MQ=255) accTAATGAAAAACAAATGAATTTAGCCAATCAtt > 1:18896219/1‑35 (MQ=255) accTAATGAAAAACAAATGAATTTAGCCAATCAtt > 1:15485770/1‑35 (MQ=255) accTAATGAAAAACAAATGAATTTAGCCAATCAtt < 1:5140183/35‑1 (MQ=255) ccTAATGAAAAACAAATGAATTTAGCCAATCATTa > 1:8199749/1‑35 (MQ=255) cTAATGAAAAACAAATTAATTTAGCCAATCATTaa > 1:18555190/1‑35 (MQ=255) cTAATGAAAAACAAATGAATTTAGCCAATCATTaa < 1:15591490/35‑1 (MQ=255) cTAATGAAAAACAAATGAATTTAGCCAATCATTaa > 1:7773551/1‑35 (MQ=255) cTAATGAAAAACAAATGAATTTAGCCAATCATTaa < 1:200018/35‑1 (MQ=255) tAATGAAAAACAAATGAATTTAGCCAATCATTAAg < 1:3113894/35‑1 (MQ=255) tAATGAAAAACAAATGAATTTAGCCAATCATTAAg > 1:14444083/1‑35 (MQ=255) tAATGAAAAACAAATGAATTTAGCCAATCATTAAg < 1:10348154/35‑1 (MQ=255) aaTGAAAAACAAATGAATTTAGCCAATCATTAAGa > 1:2989468/1‑35 (MQ=255) aaTGAAAAACAAATGAATTTAGCCAATCATTAAGa > 1:15258251/1‑35 (MQ=255) aaTGAAAAACAAATGAATTTAGCCAATCATTAAGa > 1:20575028/1‑35 (MQ=255) aaTGAAAAACAAATGAATTTAGCCAATCATTAAGa > 1:14437202/1‑35 (MQ=255) aTGAAAAACAAATGAATTTAGCCAATCATTAAGAt < 1:337944/35‑1 (MQ=255) aTGAAAAACAAATGAATTTAGCCAATCATTAAGAt > 1:6586390/1‑35 (MQ=255) aTGAAAAACAAATGAATTTAGCCAATCATTAAGAt > 1:13569927/1‑35 (MQ=255) tGAAAAACAAATGAATTTAGCCAATCATTAAGATa > 1:5530736/1‑35 (MQ=255) tGAAAAACAAATGAATTTAGCCAATCATTAAGATa > 1:1840562/1‑35 (MQ=255) tGAAAAACAAATGAATTTAGCCAATCATTAAGATa > 1:10109527/1‑35 (MQ=255) gAAAAACAAATTAATTTAGCCAATCATTAAGATaa > 1:1384035/1‑35 (MQ=255) gAAAAACAAATGAATTTAGCCAATCATTAAGATan < 1:14639433/35‑1 (MQ=255) gAAAAACAAATGAATTTAGCCAATCATTAAGATaa < 1:12713254/35‑1 (MQ=255) aaaaaCAAATGAATTTAGCCAATCATTAATATaaa > 1:9344188/1‑35 (MQ=255) aaaaaCAAATGAATTTAGCCAATCATTAAGATaaa > 1:7271172/1‑35 (MQ=255) aaaaaCAAATGAATTTAGCCAATCATTAAGATaaa > 1:14130855/1‑35 (MQ=255) aaaaCAAATGAATTTAGCCAATCATTAAGATAAAt > 1:19300186/1‑35 (MQ=255) aaaaCAAATGAATTTAGCCAATCATTAAGATAAAt < 1:18204946/35‑1 (MQ=255) aaaaCAAATGAATTTAGCCAATCATTAAGATAAAt > 1:15061587/1‑35 (MQ=255) aaaaCAAATGAATTTAGCCAATCATTAAGATAAAt < 1:12335077/35‑1 (MQ=255) aaaaAAAAaaaatttagccaatttgcttaaaagct > 1:9666375‑M2/1‑8 (MQ=255) aaaCAAATGAATTTAGCCAATCATTAAGATAAATc > 1:18046655/1‑35 (MQ=255) aaaCAAATGAATTTAGCCAATCATTAAGATAAATc > 1:17152103/1‑35 (MQ=255) aaaCAAATGAATTTAGCCAATCATTAAGATAAATc < 1:15875200/35‑1 (MQ=255) aaaCAAATGAATTTAGCCAATCATTAAGATAAATc > 1:14224404/1‑35 (MQ=255) aaCAAAaaattttagccaatttgcttaaaagctct > 1:17696788‑M2/1‑6 (MQ=255) aaCAAATGAATTTAGCCAATCATTAAGATAAATCa < 1:6942335/35‑1 (MQ=255) aaCAAATGAATTTAGCCAATCATTAAGATAAATCa < 1:16235005/35‑1 (MQ=255) aaCAAATGAATTTAGCCAATCATTAAGATAAATCa > 1:11300744/1‑35 (MQ=255) aaAAAAaaaatttagccaatttgcttaaaagctct > 1:280‑M2/1‑6 (MQ=255) aCAAATGAATTTAGCCAATCATTAAGATAAATCAg > 1:9627659/1‑35 (MQ=255) aCAAATGAATTTAGCCAATCATTAAGATAAATCAg > 1:11583940/1‑35 (MQ=255) aCAAATGAATTTAGCCAATCATTAAGATAAATCAg > 1:7956913/1‑35 (MQ=255) aCAAATGAATTTAGCCAATCATTAAGATAAATCAg < 1:18489462/35‑1 (MQ=255) aCAAATGAATTTAGCCAATCATTAAGATAAATCAg < 1:19075233/35‑1 (MQ=255) aCAAATGAATTTAGCCAATCATTAAGATAAATCAg < 1:3310586/35‑1 (MQ=255) cAAATGAATTTAGCCAATCATTAAGATAAATCAGc < 1:9769814/35‑1 (MQ=255) cAAATGAATTTAGCCAATCATTAAGATAAATCAGc > 1:6609080/1‑35 (MQ=255) cAAATGAATTTAGCCAATCATTAAGATAAATCAGc < 1:10039708/35‑1 (MQ=255) aaaTGAATTTAGCCAATCATTAAGATAAATCAGCg < 1:643286/35‑1 (MQ=255) aaaTGAATTTAGCCAATCATTAAGATAAATCAGCg > 1:18237812/1‑35 (MQ=255) aaaTGAATTTAGCCAATCATTAAGATAAATCAGCg > 1:16196435/1‑35 (MQ=255) aaaTGAATTTAGCCAATCATTAAGATAAATCAGCg < 1:11169099/35‑1 (MQ=255) aaTGAATTTAGCCAATCATTAAGATAAATCAGCGa < 1:7742006/35‑1 (MQ=255) aaTGAATTTAGCCAATCATTAAGATAAATCAGCGa < 1:7878493/35‑1 (MQ=255) aaTGAATTTAGCCAATCATTAAGATAAATCAGCGa > 1:12149825/1‑35 (MQ=255) aaTGAATTTAGCCAATCATTAAGATAAATCAGCGa > 1:10551623/1‑35 (MQ=255) aTGAATTTAGCCAATCATTAAGATAAATCAGCGAt < 1:6154774/35‑1 (MQ=255) aTGAATTTAGCCAATCATTAAGATAAATCAGCGAt < 1:546041/35‑1 (MQ=255) aTGAATTTAGCCAATCATTAAGATAAATCAGCGAt > 1:150107/1‑35 (MQ=255) | AACAAAATAGATTAACCAACCTAATGAAAAACAAATGAATTTAGCCAATCATTAAGATAAATCAGCGAT > REL606/2780560‑2780628 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |