New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 114196 = | 59 (0.570) | 12 (0.130) | 3/42 | NT | 17.6% | coding (349/390 nt) | mutT | nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP |
? | REL606 | 422596 = | 61 (0.680) | intergenic (‑283/+179) | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
Only 100 of 264 total aligned reads displayed.
ACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTA > REL606/422562‑422630 | ttattcgacgttgctaacgggccattgtggcaggg < 1:9400693‑M1/3‑1 (MQ=255) ttattcgacgttgctaacgggccattgtggcaggg < 1:10997674‑M1/3‑1 (MQ=255) ttattcgacgttgctaacgggccattgtggcaggg > 1:5074328‑M1/33‑35 (MQ=255) gtttaagcttcgcaattaccggttcattggctggg > 1:10067695‑M2/35‑35 (MQ=255) gtttaagcttcgcaattaccggttcattggctggg > 1:17251706‑M2/35‑35 (MQ=255) ccgcgcggacccgccagggttttgtgagtGGTggg < 1:8273076‑M1/6‑1 (MQ=255) aCAAATAATTATCATTATGGTGACAATtgggtggg < 1:11431386/35‑1 (MQ=255) aCAAATAATTATCATTATGGTGACAATtgggtggg > 1:1212505/1‑35 (MQ=255) tattcgacgttgctaacgggccattgtggcagggg < 1:7448511‑M1/4‑1 (MQ=255) gaacagccagcagaccaccggcgagagcGGTgggg < 1:3698596‑M1/7‑1 (MQ=255) gaacagccagcagaccaccggcgagagcGGTgggg < 1:4948007‑M1/7‑1 (MQ=255) cgcgcggacccgccagggttttgtgagtGGTgggg < 1:19062868‑M1/7‑1 (MQ=255) cgcgcggacccgccagggttttgtgagtGGTgggg < 1:2147401‑M1/7‑1 (MQ=255) cgaccggactggaagattacatcggctgggggggg < 1:3907711‑M1/4‑1 (MQ=255) cAAATAATTATCATTATGGTGACAATTGGGTgggg < 1:11435677/35‑1 (MQ=255) ttaagcttcgcaattaccggttcattggctggggg > 1:2000004‑M2/33‑35 (MQ=255) gaccggactggaagattacatcggctggggggggg < 1:5169051‑M1/5‑1 (MQ=255) attcgacgttgctaacgggccattttggcaggggt < 1:6221520‑M1/5‑2 (MQ=255) aaaTAATTATCATTATGGTGACAATTGGGTggggg < 1:12996760/35‑1 (MQ=255) aaaTAATTATCATTATGGTGACAATTGGGTggggg < 1:3783352/35‑1 (MQ=255) ttcgacgttgctaacgggccattgtggcagggggg < 1:9289387‑M1/6‑1 (MQ=255) taagcttcgcaattaccggttcattggctgggggg > 1:13163441‑M2/32‑35 (MQ=255) accggactggaagattacatcggctgggggggggg < 1:4258475‑M1/6‑1 (MQ=255) tcgacgttgctaacgggccattgtggcagggggga < 1:4353793‑M1/7‑2 (MQ=255) gcggacccgccagggttttgtgagtGGTggggggg < 1:8810253‑M1/10‑1 (MQ=255) gcggacccgccagggttttgtgagtGGTggggggg < 1:12329414‑M1/10‑1 (MQ=255) ccggactggaagattacatcggctggggggggggg < 1:2888696‑M1/7‑1 (MQ=255) ataatTATCATTATGGTGACAATTGGGTggggggg < 1:58260/35‑1 (MQ=255) aagcttcgcaattaccggttcattggctggggggg > 1:1462721‑M2/31‑35 (MQ=255) cgacgttgctaacgggccattgtggcagggggggg < 1:16525023‑M1/8‑2 (MQ=255) agcttcgcaattaccggttcattggctggGGGGGa > 1:14761675‑M2/30‑35 (MQ=255) agcttcgcaattaccggttcattggctggGGGGGa > 1:17475719‑M2/30‑35 (MQ=255) agcttcgcaattaccggttcattggctggGGGGGa > 1:4318077‑M2/30‑35 (MQ=255) agccagcagaccaccggcgagagcGGTGGGGGGGa < 1:5202221‑M1/11‑1 (MQ=255) ggactggaagattacatcggctggggGGGGGGGaa < 1:11784737‑M1/9‑1 (MQ=255) ggacccgccagggttttgtgagtGGTGGGGGGGaa < 1:15820885‑M1/12‑1 (MQ=255) gcttcgcaattaccggttcattggctgggggggga > 1:474097‑M2/29‑33 (MQ=255) gccagcagaccaccggcgagagcGGTGGGGGGGaa < 1:18601162‑M1/12‑1 (MQ=255) gacgttgctaacgggcccttgtggcaGGGGGGGaa < 1:17686798‑M1/9‑1 (MQ=255) gacgttgctaacgggccattgtggcaGGGGGGGaa < 1:1842392‑M1/9‑1 (MQ=255) gacgttgctaacgggccattgtggcaGGGGGGGaa < 1:2438790‑M1/9‑1 (MQ=255) aatTATCATTATGGTGACAATTGGGTGGGGGGGaa > 1:13452254/1‑35 (MQ=255) aatTATCATTATGGTGACAATTGGGTGGGGGGGaa < 1:2985585/35‑1 (MQ=255) aatTATCATTATGGTGACAATTGGGTGGGGGGGaa > 1:3066582/1‑35 (MQ=255) gactggaagattacatcggctggggGGGGGGGaaa < 1:6881235‑M1/10‑1 (MQ=255) gacccgccagggttttgtgagtGGTGGGGGggaca < 1:15868046‑M1/13‑3 (MQ=255) cttcgcaattaccggttcattggctggGGGGGaaa > 1:7647681‑M2/28‑35 (MQ=255) ccagcagaccacctgcgagagcGGTGGGGGGGaaa < 1:523962‑M1/13‑1 (MQ=255) atTATCATTATGGTGACAATTGGGTGGGGGGGaaa > 1:17426245/1‑35 (MQ=255) atTATCATTATGGTGACAATTGGGTGGGGGGGaaa > 1:13506983/1‑35 (MQ=255) atTATCATTATGGTGACAATTGGGTGGGGGGGaaa < 1:11534059/35‑1 (MQ=255) acgttgctaacgggccattgtggcaGGGGGGGaaa < 1:8911054‑M1/10‑1 (MQ=255) acgttgctaacgggccattgtggcaGGGGGGGaaa < 1:14088975‑M1/10‑1 (MQ=255) acgttgctaacgggccattgtggcaGGGGGGGaaa < 1:102746‑M1/10‑1 (MQ=255) ttATCATTATGGTGACAATTGGGTGGGGGGGaaaa < 1:9855631/35‑1 (MQ=255) gactccggttccgtagcgggGGGAGGGGGGGaaaa < 1:6554989‑M1/15‑1 (MQ=255) actggaagattacatcggctggggGGGGGGgaaac < 1:18464002‑M1/11‑2 (MQ=255) actggaagattacatcggctggggGGGGGGGaaaa < 1:7743100‑M1/11‑1 (MQ=255) acccgccagggttttgtgagtGGTGGGGGGGgaaa < 1:16972737‑M1/14‑1 (MQ=255) tATCATTATGGTGACAATTGGGTGGGGGGGAAAAt < 1:18784332/35‑1 (MQ=255) gttgctaacggaccattgtggcaGGGGGGgaaaaa < 1:13895088‑M1/12‑2 (MQ=255) ctggaagattacatcggctggggGGGGGGGAAAAt < 1:17894094‑M1/12‑1 (MQ=255) agcagaccaccggcgagagcGGTGGGGGGgaaaaa < 1:3051421‑M1/15‑2 (MQ=255) ttgctaacgggccattgtggcaGGGGGggaaaaag < 1:13615835‑M1/13‑3 (MQ=255) tCATTATGGTGACAATTGGGTGGGGGGGAAAATaa < 1:18750672/35‑1 (MQ=255) gctaacgggccattgtggcaGGGGGGGAAAATaaa < 1:2281270‑M1/15‑1 (MQ=255) cATTATGGTGACAATTGGGTGGGGGGGAAAATaaa < 1:7134294/35‑1 (MQ=255) cATTATGGTGACAATTGGGTGGGGGGGAAAATaaa < 1:732726/35‑1 (MQ=255) ttATGGTGACAATTGGGTGGGGGGGAAAATAAAGa > 1:11143085/1‑35 (MQ=255) ttAAGGTGACAATTGGGTGGGGGGGAAAATAAAGa > 1:20382712/1‑35 (MQ=255) tATGGTGACAATTGGGTGGGGGGGAAAATAAAGAc > 1:16319648/1‑35 (MQ=255) aTGGTGACAATTGGGTGGGGGGGAAAATAAAGACt < 1:911436/35‑1 (MQ=255) aTGGTGACAATTGGGTGGGGGGGAAAATAAAGACt < 1:683481/35‑1 (MQ=255) aTGGTGACAATTGGGTGGGGGGGAAAATAAAGACt > 1:10248040/1‑35 (MQ=255) tGGTGACAATTGGGTGGGGGGGAAAATAAAGACTc > 1:1272309/1‑35 (MQ=255) tGGTGACAATTGGGTGGGGGGGAAAATAAAGACTc > 1:8574493/1‑35 (MQ=255) tGGTGACAATTGGGTGGGGGGGAAAATAAAGACTc > 1:6011501/1‑35 (MQ=255) ggTGACAATTGGGTGGGGGGGAAAATAAAGACTCa > 1:11283749/1‑35 (MQ=255) gTGACAATTGGGTGGGGGGGAAAATAAAGACTCAt > 1:20102830/1‑35 (MQ=255) tGACAATTGGGTGGGGGGGAAAATAAAGACTCAtt > 1:3252817/1‑35 (MQ=255) gACAATTGGGTGGGGGGGAAAATAAAGACTCATTa > 1:16901267/1‑35 (MQ=255) cAATTGGGTGGGGGGGAAAATAAAGACTCATTAGc > 1:15505162/1‑35 (MQ=255) cAATTGGGTGGGGGGGAAAATAAAGACTCATTAGc < 1:4628242/35‑1 (MQ=255) aaTTGGGTGGGGGGGAAAATAAAGACTCATTAGCt < 1:7859374/35‑1 (MQ=255) ttGGGTGGGGGGGAAAATAAAGACTCATTAGCTGa < 1:13795807/35‑1 (MQ=255) ttGGGTGGGGGGGAAAATAAAGACTCATTAGCTGa > 1:18213262/1‑35 (MQ=255) tgggtgggGGGGAAAATAAAGACTCATTAGCTGaa > 1:11822704/1‑35 (MQ=255) gggtgggGGGGAAAATAAAGACTCATTAGCTGAAt > 1:16147184/1‑35 (MQ=255) gggtgggGGGGAAAATAAAGACTCATTAGCTGAAt > 1:12252054/1‑35 (MQ=255) GGTGGGGGGGAAAATAAAGACTCATTAGCTGAATc > 1:10535549‑M1/1‑35 (MQ=255) GGTGGGGGGGAAAATAAAGACTCATTAGCTGAATc > 1:8085840‑M1/1‑35 (MQ=255) GGTGGGGGGGAAAATAAAGACTCATTAGCTGAATc < 1:15359976‑M1/35‑1 (MQ=255) GGTGGGGGGGAAAATAAAGACTCATTAGCTGAATc < 1:1436646‑M1/35‑1 (MQ=255) GTGGGGGGGAAAATAAAGACTCATTAGCTGAATCg > 1:18011126‑M1/1‑35 (MQ=255) GTGGGGGGGAAAATAAAGACTCATTAGCTGAATCg > 1:15147218‑M1/1‑35 (MQ=255) TGGGGGGGAAAATAAAGACTCATTAGCTGAATCgt > 1:19644290‑M1/1‑35 (MQ=255) ggggtgAAAATAAAGACTCATTAGCTTAATCgtgt > 1:14959419/1‑35 (MQ=37) GGGGGAAAATAAAGACTCATTAGCTGAATCGTGTa > 1:16554410‑M1/1‑35 (MQ=255) GGGGGAAAATAAAGACTCATTAGCTGAATCGTGTa > 1:18867935‑M1/1‑35 (MQ=255) GGGGGAAAATAAAGACTCATTAGCTGAATCGTGTa > 1:10373719‑M1/1‑35 (MQ=255) | ACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTGTA > REL606/422562‑422630 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |