New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 875814 = | 63 (0.610) | 19 (0.220) | 5/40 | NT | 23.4% | coding (127/597 nt) | ybjG | undecaprenyl pyrophosphate phosphatase |
? | REL606 | = 3285418 | 72 (0.840) | coding (277/654 nt) | yhbL | isoprenoid biosynthesis protein with amidotransferase‑like domain |
TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/875851‑875814 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAATT < REL606/3285418‑3285385 TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGG > 1:16029636/1‑35 TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGG > 1:11200131/1‑35 TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGG > 1:8123150/1‑35 TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGG > 1:11966280/1‑35 TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGG > 1:6072934/1‑35 GCTAAAGATTTGATTACCGTGGTGCGGTTGCTGGC < 1:19153585/35‑1 GCTAAAGATTTGATTACCGTGGTGCCGTTGCTGGC > 1:9054847/1‑35 CTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCC < 1:7872098/35‑1 CTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCC < 1:2152324/35‑1 CTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCC > 1:4257062/1‑35 CTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCC > 1:1396575/1‑35 CTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCC < 1:9437435/35‑1 TAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG < 1:5960085/35‑1 TAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG < 1:7394922/35‑1 TAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG > 1:11555470/1‑35 TAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG < 1:5936939/35‑1 TAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG > 1:18792216/1‑35 AAAGATTTGATTACCGTGGTGCCGTTGCTGGCCGG > 1:16400411/1‑35 AAGATTTTATTACCGTGGTGCCGTTGCTGGCCGGG > 1:14217126/1‑35 AAGATTTGATTACCGTGGTGCCGTTGCTGGCCGGG > 1:17528159/1‑35 AGATTTGATTACCGTGGTGCCGTTGCTGGCCGGGG > 1:16904344/1‑35 GATTTGATTACCGTGGTGCCGTTGCTGGCCGGGGG > 1:20580219/1‑35 GATTTGATTACCGTGGTGCCGTTGCTGGCCGGGGG > 1:8574143/1‑35 GATTTGATTACCGTGGTGCCGTTGCTGGCCGGGGG > 1:15772664/1‑35 GATTTGATTACCGTCGTGCCGTTGCTGGCCGGGGG > 1:3450289/1‑35 ATTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGG > 1:4932315/1‑35 ATTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGG > 1:12745906/1‑35 ATTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGG > 1:5820602/1‑35 TTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGa > 1:17674200/1‑34 TTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGG > 1:18380023/1‑35 TTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGG > 1:20455775/1‑35 TTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGG > 1:11815992/1‑35 TTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGG > 1:13750854/1‑35 TTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGG > 1:2777538/1‑35 TTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGGT > 1:8949098/1‑35 TTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGGT > 1:4140564/1‑35 TGATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTT > 1:7997012/1‑35 TGATTACCGTGGTGCCGTTGCTGGCCGGGGGGCTT > 1:9494065/1‑35 GATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTT > 1:14925027/1‑35 GATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTT > 1:15285841/1‑35 GATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTT > 1:7648009/1‑35 GATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTT > 1:18169103/1‑35 GATTACCGTGGTGCCGTTGCTGGCCGGGGGGGCTT > 1:2347548/1‑35 GATTACCGTGGTGCCGTTGCTGGCCGGGGGGGCTT > 1:13597295/1‑35 ATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTTt > 1:18119420/1‑34 ATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTTN > 1:9942611/1‑35 ATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTTG > 1:9442202/1‑35 CCGTGGTGCCGTTGCTGGCCGGGGGGGTTTGGtgg > 1:15312708/1‑32 GCCGGGGGGGTTTGTCGCGGCGAAGAATTTAAGCA > 1:14664523/1‑35 GCCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCA < 1:10737366/35‑1 GCCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCA < 1:11895661/35‑1 GCCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCA < 1:3122640/35‑1 GCCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCA < 1:15067253/35‑1 CCGGTGGGGTTTGGCGCGGCGAAGAATTTAAGCAA > 1:7615931/1‑35 CCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAA > 1:3098342/1‑35 CCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAA < 1:2216517/35‑1 CGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAAT < 1:14826452/35‑1 CGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAAT > 1:18066657/1‑35 CGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAAT < 1:7164230/35‑1 CGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAAT < 1:5363426/35‑1 GGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAATT < 1:4694345/35‑1 GGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAATT < 1:501905/35‑1 GGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAATT > 1:10988355/1‑35 TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/875851‑875814 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAATT < REL606/3285418‑3285385 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |