Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6062,775,4100C→G100.0% 1.1 9D141H (GAC→CAC) insJ‑3IS150 hypothetical protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (7/0):  ref base (2/0):  total (9/0)

CTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTG  >  REL606/2775380‑2775430
                              |                    
cTTGCCTTTCAAGATCCTCAATGCGTCGGGGtttt                  >  1:6932096/1‑35 (MQ=1)
cTTGCCTTTCAAGATCCTCAATGCGTCGGGGtttt                  >  1:17328966/1‑35 (MQ=1)
cTTGCCTTTCAAGATCCTCAATGCGTCGGGGtttt                  >  1:16753494/1‑35 (MQ=1)
cTTGCCTTTCAAGATCCTCAATGCGTCGGGGtttt                  >  1:11657568/1‑35 (MQ=1)
cTTGCCTTTCAAGATCCTCAATGCGTCGGGCtctt                  >  1:14379562/1‑35 (MQ=1)
 ttGCCTTTCAAGATCCTCAATGCGTCGGGGttttt                 >  1:16716484/1‑34 (MQ=1)
 ttGCCTTTCAAGATCCTCAATGCGTCGGGGttttt                 >  1:15196679/1‑34 (MQ=1)
 ttGCCTTTCAAGATCCTCAATGCGTCGGGGttttt                 >  1:12658372/1‑34 (MQ=1)
 ttGCCTTTCAAGATCCTCAATGCGTCGGGGttttt                 >  1:10064914/1‑34 (MQ=1)
 ttGCCTTTCAAGATCCTCAATGCGTCGGGGttttt                 >  1:10211509/1‑34 (MQ=1)
  tGCCTTTCAAGATCCTCAATGCGTCGGGGttttta                >  1:13811759/1‑33 (MQ=1)
  tGCCTTTCAAGATCCTCAATGCGTCGGGGttttta                >  1:12389394/1‑33 (MQ=1)
  tGCCTTTCAAGATCCTCAATGCGTCGGGGttttta                >  1:18965648/1‑33 (MQ=1)
  tGCCTTTCAAGATCCTCAATGCGTCGGGGttttta                >  1:20522210/1‑33 (MQ=1)
   gCCTTTCAAGATCCTCAATGCGTCGGGGTTTTTAc               >  1:19896986/1‑35 (MQ=1)
     cTTTCAAGATCCTCAATGCGTCGGGCTTTTTAccg             >  1:5624011/1‑33 (MQ=1)
      tttCAAGATCCTCAATGCGTCGGGGTTTTTGCAGc            >  1:3199751/1‑35 (MQ=0)
      tttCAAGATCCTCAATGCGTCGGGCTTTTTACCGc            >  1:18442725/1‑35 (MQ=1)
        tCAAGATCCTCAATGCGTCGGGCTTTTGATGGCTc          >  1:8355952/1‑35 (MQ=1)
          aaGATCCTCAATGCGTCGGGGTTTTTACAGCCccc        >  1:13346352/1‑34 (MQ=0)
          aaGATCCTCAATGCGTCGGGCTTTTTTTAGCTccc        >  1:8249551/1‑34 (MQ=0)
           aGATCCTCAATGCGTCGGGCTTTTTACCGGTccca       >  1:11625519/1‑33 (MQ=0)
           aGATCCTCAATGCGTCGGGCTTTTTACAGCCccca       >  1:5282124/1‑33 (MQ=1)
               ccTCAATGCGTCGGGCTTTTTACAGCTCCCAAGCt   >  1:10627961/1‑35 (MQ=0)
                cTCAATGCGTCGGGCTTTTTACAGCTCCAAAGccg  >  1:7080431/1‑33 (MQ=1)
                              |                    
CTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTG  >  REL606/2775380‑2775430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.