New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 313085 | 24 (0.230) | 4 (0.040) | 3/48 | NT | 6.4% | coding (272/951 nt) | yahI | predicted carbamate kinase‑like protein |
? | REL606 | = 661462 | 93 (0.910) | intergenic (+13/+47) | ybeV/hscC | Hsc56 co‑chaperone of HscC/Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription |
AACTGTGTGGCAGATACGCAGGGCGGCATCGGCTATCTGATCCAACAGGCGCTGAATAACCGGCTGGCG > REL606/313051‑313119 | aaCTGTGT‑GCAGATACGCAGGGCGGCACCGGCTaa > 1:15537914/1‑34 (MQ=25) aCTGTGTGGCAGATACGCAGGGCTGCATCGGCTAa > 1:2686087‑M1/1‑34 (MQ=255) aCTGTGTGGCAGATACGCAGGGCGGCATCGGCTAa > 1:5327017‑M1/1‑34 (MQ=255) aCTGTGTGGCAGATACGCAGGGCGGCATCGGCTAa > 1:2946702‑M1/1‑34 (MQ=255) cTGTGTGACAGATACGCAGGGCGGCATCGGCTAaa > 1:1811277‑M1/1‑33 (MQ=255) tgtgtgGCAGATACGCAGGGCGGCATCGGGTAaaa > 1:14153899‑M1/1‑32 (MQ=255) tgtgtgGCAGATACGCAGGGCGGCATCGGCTAaca > 1:6851068‑M1/1‑32 (MQ=255) tgtgtgGCAGATACGCAGGGCGGCATCGGCTAaaa > 1:1373953‑M1/1‑32 (MQ=255) gtgGCAGATACGCAGGGCGGCATCGGCTAaaaaaa > 1:13624852‑M1/1‑29 (MQ=255) tgGCAGATACGCAGGGCGGCATCGGCTAaaaaatc > 1:4535506‑M1/1‑28 (MQ=255) tgGCAGATACGCAGGGCGGCATCGGCTAaaaaaac > 1:4488996‑M1/1‑28 (MQ=255) ggCAGATATGCAGGGCGGCATCGGCTAaaaaaaca > 1:674702‑M1/1‑27 (MQ=255) ggCAGATACGCAGGGCGGCATCGGCTAaaaaaacc > 1:5174974‑M1/1‑27 (MQ=255) acAGATGCGAAGGGCGGCATCGGCTATCTGATCCa < 1:15196281/34‑1 (MQ=37) cAGATACGCAGGGCGGCATCGGCTAAAAGATCCaa > 1:1597650/1‑35 (MQ=25) gATACGCAGGGCGGCATCGTCTATCTGATCCaaaa > 1:2331728/1‑33 (MQ=38) gccGCGGGGCGCCATCGGCTATCTGATCCAACAgg < 1:15744571/33‑1 (MQ=25) cGCGGGGCGGCATCGGCTATCTGATCCAACAGgcg < 1:13816263/35‑1 (MQ=255) cGCAGGGCGGCATCTGCTATCTGATCCAACAGgcg > 1:78051/1‑35 (MQ=255) gggCGCCATCGGCCATCTGATCCAACAGGCGCTGa < 1:19718052/35‑1 (MQ=37) ggcATCGGCTATCTGATCCAACAGGCGCTGAATaa < 1:18628579/35‑1 (MQ=255) gccATAGGCTATCTGATCCAACAGGCGCTGAATaa < 1:7632523/33‑1 (MQ=25) cccATCGGCTATCTGATCCAACAGGCGCTGAATaa < 1:17003768/33‑1 (MQ=255) cccATCGGCTATCTGATCCAACAGGCGCTGAATaa < 1:16074116/33‑1 (MQ=255) ccATCGGCTATCTGATCCAACAGGCGCTGAATAAc < 1:1612957/34‑1 (MQ=255) ccATCGGCTATCTGATCCAACAGGCGCTGAATAAc < 1:7125489/34‑1 (MQ=255) cATCGGCTATCTGATCCACCAGGCGCTGAATAAcc < 1:15484972/35‑1 (MQ=255) cATCGGCTATCTGATCCAACAGGCGCTGAATAAcc < 1:644247/35‑1 (MQ=255) cATCGGCTATCTGATCCAACAGGCGCTGAATAAcc < 1:10515507/35‑1 (MQ=255) cATCGGCTATCTGATCCAACAGGCGCTGAATAAcc < 1:3161799/35‑1 (MQ=255) cATCGGCTATCTGATCCAACAGGCGCTGAATAAcc < 1:16694527/35‑1 (MQ=255) cATCGGCTATCTGATCCAACAGGCGCTGAATAAcc < 1:19343848/35‑1 (MQ=255) cATCGGCTATCTGATCCAACAGGAGCTGAATAAcc < 1:5372140/35‑1 (MQ=255) aTCGGCTATCTGATCCAACAGGCGCTGAATAACCg < 1:6675858/35‑1 (MQ=255) aTCGGCTATCTGATCCAACAGGCGCTGAATAACCg < 1:17818851/35‑1 (MQ=255) tCGGCTATCTGATCCAACAGGCGCTGAATAACCgg < 1:11879226/35‑1 (MQ=255) tCGGCTATCTGATCCAACAGGCGCTGAATAACCgg < 1:9204405/35‑1 (MQ=255) ggCTATCTGATCCAACAGGCGCTGAATAACCGGCt < 1:5730032/35‑1 (MQ=255) ggCTATCTGATCCAACAGGCGCTGAATAACCGGCt > 1:9352727/1‑35 (MQ=255) ggCTATCTGATCCAACAGGCGCTGAATAACCGGCt < 1:11837114/35‑1 (MQ=255) ggCTATCTGATCCAACAGGCGCTGAATAACCGGCt > 1:12485231/1‑35 (MQ=255) ggCTATCTGATCCAACAGGCGCTGAATAACCGGCt > 1:18963064/1‑35 (MQ=255) ggCTATCTGATCCAACAGGCGCTGAATAACCGGCt > 1:17832113/1‑35 (MQ=255) ggCTATCTGATCCAACAGGCGCTGAATAACCGGCt > 1:17253897/1‑35 (MQ=255) gCTATCTGATCCACCAGGCGCTGAATAACCGGCTg < 1:2653031/35‑1 (MQ=255) gCTATCTGATCCAACAGGCGCTGAATAACCGGCtt > 1:4814908/1‑34 (MQ=255) gCTATCTGATCCAACAGGCGCTGAATAACCGGCTg < 1:7285085/35‑1 (MQ=255) cTATCTGATCCAACAGGCGCTGAATAACCGGCTgg < 1:1026182/35‑1 (MQ=255) cTATCTGATCCAACAGGCGCTGAATAACCGGCTgg > 1:8271638/1‑35 (MQ=255) cTATCTGATCCAACAGGCGCTGAATAACCGGCTgg < 1:15922791/35‑1 (MQ=255) cTATCTGATCCAACAGGCGCTGAATAACCGGCTgg > 1:17148557/1‑35 (MQ=255) cTATCTGATCCAACAGGCGCTGAATAACCGGCTgg < 1:19232405/35‑1 (MQ=255) cTATCTGATCCAACAGGCGCTGAATAACCGGCTgg > 1:20227681/1‑35 (MQ=255) tATCTGATCCAACAGGCGCTGAATAACCGGCTggg > 1:5484410/1‑34 (MQ=255) tATCTGATCCAACAGGCGCTGAATAACCGGCTggg > 1:3526/1‑34 (MQ=255) tATCTGATCCAACAGGCGCTGAATAACCGGCTggg > 1:12291525/1‑34 (MQ=255) tATCTGATCCAACAGGCGCTGAATAACCGGCTGgc < 1:635615/35‑1 (MQ=255) tATCTGATCCAACAGGCGCTGAATAACCGGCTGgc > 1:15848661/1‑35 (MQ=255) tATCTGATCCAACAGGCGCTGAATAACCGGCTGgc < 1:19402674/35‑1 (MQ=255) tATCTGATCCAACAGGCGCTGAATAACCGGCTGgc < 1:20121528/35‑1 (MQ=255) tATCTGATCCAACAGGCGCTGAATAACCGGCTGgc < 1:10703652/35‑1 (MQ=255) aTCTGGTCCAACAGGCGCTGAATAACCGGCTGgcg < 1:17127597/35‑1 (MQ=255) aTCTGATCCAACAGGCGCTGAATAACCGGCTgggg > 1:12763161/1‑33 (MQ=255) aTCTGATCCAACAGGCGCTGAATAACCGGCTgggg > 1:2705585/1‑33 (MQ=255) | AACTGTGTGGCAGATACGCAGGGCGGCATCGGCTATCTGATCCAACAGGCGCTGAATAACCGGCTGGCG > REL606/313051‑313119 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |