Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,015,771 | IS150 (–) +3 bp | 97.6% | coding (1192‑1194/1677 nt) | ECB_02816 → | KpsD protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2775877 | NA (NA) | 109 (1.160) | 37/44 | NT | 97.9% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 3015771 = | 2 (0.020) | coding (1192/1677 nt) | ECB_02816 | KpsD protein | |||||
* | ? | REL606 | = 3015773 | 3 (0.040) | 97 (0.980) | 40/46 | NT | 96.6% | coding (1194/1677 nt) | ECB_02816 | KpsD protein |
? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 141 total aligned reads displayed.
TTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2775848‑2775877 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCA > REL606/3015771‑3015804 TTCATCGTCCAACAAAATGGGTGCAGTACACTTTC > 1:10585671/1‑35 TTCATCGTCCAACAAAATGGGTGCAGTACACTTTC > 1:8811953/1‑35 TTCATCGTCCAACAAAATGGGTGCAGTACACTCTC < 1:19976234/35‑1 TCATCGTCCAACAAAATGGGTGCAGTACACTTTCT > 1:3602582/1‑35 TCATCGTCCAACAAAATGGGTGCAGTACACTTTCT < 1:9103824/35‑1 TCATCGTCCAACAAAATGGGTGCAGTACACTTTCT > 1:12178769/1‑35 TCATCGTCCAACAAAATGGGTGCAGTACACTTTCT < 1:1507408/35‑1 CATCGTCCAACAAAATGGGTGCAGTACACTTTCTG < 1:20125633/35‑1 CATCGTCCAACAAAATGGGTGCAGTACACTTTCTG < 1:19019247/35‑1 CATCGTCCAACAAAATGGGTGCAGTACACTTTCTG < 1:8217389/35‑1 CATCGTCCAACAAAATGGGTGCAGTACACTTTCTG > 1:8322173/1‑35 CATCGTCCAACAAAATGGGTGCAGTACACTTTCTG < 1:16303983/35‑1 CATCGTCCAACAAAATGGGTGCAGTACACTTTCTG > 1:8960367/1‑35 CATCGTCCAACAAAATGGGTGCAGTACACTCTCTt < 1:10129657/35‑2 ATCGTCCAACAAAATGGGTGCAGTACACTTTCTGC < 1:6435409/35‑1 ATCGTCCAACAAAATGGGTGCAGTACACTTTCTGC < 1:18571660/35‑1 ATCGTCCAACAAAATGGGTGCAGTACACTTTCTGC > 1:18142849/1‑35 TCGTCCAACAAAATGGGTGCAGTACACTTTCTGac < 1:17943087/35‑3 TCGTCCAACAAAATGGGTGCAGTACACTTTCTGCC < 1:958079/35‑1 TCGTCCAACAAAATGGGTGCAGTACACTTTCTGCC < 1:20611137/35‑1 CGTCCAACAAAATGGGTGCAGTACACTTTCTGCCC < 1:12376254/35‑1 GTCCAACAAAATGGGTGCAGTACACTTTCTGCCCA > 1:14013122/1‑35 GTCCAACAAAATGGGTGCAGTACACTTTCTGCCCA > 1:12293588/1‑35 GTCCAACAAAATGGGTGCAGTACACTTTCTGCCCA < 1:16002933/35‑1 GTCCAACAAAATGGGTGCAGTACACTTTCTGCCCA > 1:2115644/1‑35 TCCAACAAAATGGGTGCAGTACACTTTCTGCCCAG < 1:11039746/35‑1 TCCAACAAAATGGGTGCAGTACACTTTCTGCCCAG < 1:8892937/35‑1 TCCAACAAAATGGGTGCAGTACACTTTCTGCCCAG < 1:6016540/35‑1 TCCAACAAAATGGGTGCAGTACACTTTCTGCCCAG < 1:2355547/35‑1 CCAACAAAATGGGTGCAGTACACTTTCTGCCCAGT < 1:20412445/35‑1 CCAACAAAATGGGTGCAGTACACTTTCTGCCCAGT < 1:5567874/35‑1 CAACAAAATGGGTGCAGTACACTTTCTGCCCATTC > 1:12628641/1‑35 CAACAAAATGGGTGCAGTACACTTTCTGCCCAGTC < 1:15771863/35‑1 CAACAAAATGGGTGCAGTACACTTTCTGCCCAGTC < 1:10430561/35‑1 CAACAAAATGGGTGCAGTACACTTTCTGCCCAGTC < 1:19342820/35‑1 CAACAAAATGGGTGCAGTACACTTTCTGCCCAGTC < 1:716700/35‑1 AACAAAATGGGTGCAGTACACTTTCTGCCCAGTCA < 1:1958813/35‑1 AACAAAATGGGTGCAGTACACTTTCTGCCCAGTCA < 1:6929676/35‑1 AACAAAATGGGTGCAGTACACTTTCTGCCCAGTCA < 1:15815354/35‑1 AACAAAATGGGTGCAGTACACTTTCTGCCCAGTCA > 1:7545592/1‑35 AACAAAATGGGTGCAGTACACTTTCTGCCCAGTCA < 1:18263547/35‑1 ACAAAATGGGTGCAGTACACTTTCTGCCCAGTCAT < 1:1438419/35‑1 CAAAATGGGTGCAGTACACTTTCTGCCCAGTCATC < 1:6658111/35‑1 CAAAATGGGTGCAGTACACTTTCTGCCCAGTCATC > 1:10308404/1‑35 CAAAATGGGTGCAGTACACTTTCTGCCCAGTCATC < 1:20014118/35‑1 AAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC < 1:8980174/35‑1 AAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC < 1:305983/35‑1 AAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC > 1:14968577/1‑35 AAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC > 1:11212992/1‑35 AAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC < 1:10993932/35‑1 AAAATGGGTGCAGTACACTTTCTGCACAGTCATCC < 1:7277826/35‑1 AAATGGGTGCAGTACACTTTCTGCCCAGTCATCCA > 1:15568427/1‑35 AAATGGGTGCAGTACACTTTCTGCCCAGTCATCCA > 1:15922113/1‑35 AAATGGGTGCAGTACACTTTCTGCCCAGTCATCCA < 1:10825599/35‑1 AAATGGGTGCAGTACACTTTCTGCCCAGTCATCCA < 1:19625677/35‑1 AAATGGGTGCAGTACACTTTCTGCACAGTCATCCA < 1:6067611/35‑1 gATGGGTGCAGTACACTTTCTGCCCAGTCATCCAC < 1:163360/34‑1 AATGGGTGCAGTACACTTTCTGCCCAGTCATCCAC > 1:6693452/1‑35 AATGGGTGCAGTACACTTTCTGCCCAGTCATCCAC < 1:19637690/35‑1 AATGGGTGCAGTACACTTTCTGCCCAGTCATCCAC < 1:4616861/35‑1 ATGGGTGCAGTACACTTTCTGCCCAGTCATCCACC > 1:16899893/1‑35 TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCA < 1:9996273/35‑1 TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCA < 1:413635/35‑1 TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCA < 1:1531768/35‑1 TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCA > 1:19287362/1‑35 TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCA > 1:18611485/1‑35 GGGTGCAGTACACTTTCTGCCCAGTCATCCACCAA > 1:6812638/1‑35 GGGTGCAGTACACTTTCTGCCCAGTCATCCACCAA < 1:1856003/35‑1 GGGTGCAGTACACTTTCTGCCCAGTCATCCACCAA > 1:9573095/1‑35 GGTGCAGTACACTTTCTGCCCAGTCATCCACCAAA > 1:10977020/1‑35 GGTGCAGTACACTTTCTGCCCAGTCATCCACCAAA < 1:5645095/35‑1 GGTGCAGTACACTTTCTGCCCAGTCATCCACCAAA < 1:11990473/35‑1 GTGCAGTACACTTTCTGCCCAGTCATCCACCAAAG > 1:331694/1‑35 GTGCAGTACACTTTCTGCCCAGTCATCCACCAAAG > 1:6413262/1‑35 TGCAGTACACTTTCTGCCCAGTCATCCACCAAAGA < 1:13900448/35‑1 TGCAGTACACTTTCTGCCCAGTCATCCACCAAAGA < 1:20331566/35‑1 GCAGTACACTTTCTGCCCAGTCATCCACCAAAGAA > 1:9133667/1‑35 GCAGTACACTTTCTGCCCAGTCATCCACCAAAGAA > 1:2393980/1‑35 CAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG > 1:17722129/1‑35 CAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG > 1:17489285/1‑35 CAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG > 1:20451152/1‑35 CAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG < 1:3932050/35‑1 CAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG > 1:10897976/1‑35 GTAGACTTTCTGCCCAGTCATCCACCAAAGAAGAA < 1:9866886/35‑1 GTACACTTTCTGCCCAGTCATCCACCAAAGAAGAA > 1:311293/1‑35 nACACTTTCTGCCCAGTCATCCACCAAAGAAGAAG > 1:18451743/2‑35 TACACTTTCTGCCCAGTCATCCACCAAAGAAGAAG > 1:1562547/1‑35 ACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGC < 1:16497524/35‑1 ACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGC < 1:8743355/35‑1 ACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGC < 1:18973625/35‑1 ACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGC < 1:2135779/35‑1 ACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGC > 1:3536743/1‑35 CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC > 1:8836653/1‑35 CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC > 1:7272745/1‑35 CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC > 1:20528379/1‑35 CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC < 1:9323085/35‑1 CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC < 1:5881268/35‑1 CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC > 1:4663497/1‑35 CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC > 1:4622795/1‑35 CACTTTATGCCCAGTCATCCACCAAAGAAGAAGCC < 1:7499478/35‑1 TTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2775848‑2775877 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCA > REL606/3015771‑3015804 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |