New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 294204 = | 76 (0.740) | 6 (0.070) | 3/38 | NT | 10.8% | intergenic (+474/‑53) | ykgD/ykgE | predicted DNA‑binding transcriptional regulator/predicted oxidoreductase |
? | REL606 | = 2574914 | 39 (0.480) | intergenic (+756/+62) | sseA/sseB | 3‑mercaptopyruvate sulfurtransferase/rhodanase‑like enzyme, sulfur transfer from thiosulfate |
TACTTCATGCCCATTTATGCCCGATGTTTCCCCCCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/294242‑294204 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccAGTAAATTGTCGCCGGAGAGACTCCGGTTATTAT < REL606/2574914‑2574881 TACTTCATGCCCATTTATGCCCGATGTTTCCCCCC < 1:18270981/35‑1 TACTTCATGCCCATTTATGCCCGATGTTTCCCCCC > 1:17621180/1‑35 ACTTCATGCCCATTTATGCCCGATGTTTCCCCCCC < 1:12018042/35‑1 ACTTCATGCCCATTTATGCCCGATGTTTCCCCCCC < 1:8427441/35‑1 CTTCATGCCCATTTATGCCCGATGTTTCCCCCCCA < 1:2120570/35‑1 CTTCATGCCCATTTATGCCCGATGTTTCCCCCCCA < 1:19229132/35‑1 CTTCATGCCCATTTATGCCCGATGTTTCCCCCCCA < 1:8317626/35‑1 CTTCATGCCCATTTATGCCCGATGTTTCCCCCCCA < 1:4823443/35‑1 TTCATGCCCATTTATGCCCGATGTTTCCCCCCCAC < 1:14660881/35‑1 TTCATGCCCATTTATGCCCGATGTTTCCCCCCCAC > 1:15196082/1‑35 TTCATGCCCATTTATGCCCGATGTTTCCCCCCCAC < 1:14167120/35‑1 TTCATGCCCATTTATGCCCGATGTTTCCCCCCCAC < 1:2891241/35‑1 TTCATGCCCATTTATGCCCGATGTTTCCCCCCCAC > 1:8353963/1‑35 TTCATGCCCATTTATGCCCGATGTTTCCCCCCCAC > 1:12959831/1‑35 TTCATGCCCATTTATGCCCGATGTTTCCCCCCCAC < 1:8963994/35‑1 TTCATGCCCATTTATGCCCGATGTTTCCCCCCCAC < 1:11640022/35‑1 TCATGCCCATTTATGCCCGATGTTTCCCCCCCACC > 1:1697024/1‑35 TCATGCCCATTTATGCCCGATGTTTCCCCCCCACC < 1:2539451/35‑1 TCATGCCCATTTATGCCCGATGTTTCCCCCCCACC > 1:7555802/1‑35 TCATGCCCATTTATGCCCGATGTTTCCCCCCCACC > 1:14068812/1‑35 TCATGCCCATTTATGCCCGATGTTTCCCCCCCACC > 1:1370730/1‑35 TCATGCCCATTTATGCCCGATGTTTCCCCCCCACC < 1:12100844/35‑1 TCATGCCCATTTATGCCCGATGTTTCCCCCCCACC > 1:10117112/1‑35 gGTTTCTCCCCCACCAGTAAATTGTCGCCGGAGAG < 1:16335979/34‑1 TGTTTCCCCCCCACCAGTAAATTGTCGCCGGAGAG < 1:2815950/35‑1 tTTTGCCCCCCACCAGTAAATTGTCGCCGGAGAGA < 1:9226844/34‑1 GTTTCCCCCCCACCAGTAAATTGTCGCCGGAGAGA < 1:4171774/35‑1 GTTTCCCCCCCACCAGTAAATTGTAGCCGGAGAGA < 1:2817470/35‑1 tctCCCCCCACCAGTAAATTGTCGCCGGAGAGACN < 1:10611803/32‑1 TTCCCCCCCACCAGTAAATTGTCGCCGGAGAGACT < 1:11868187/35‑1 tctCCCCCACCAGTAAATTGTCGCCGGAGAGACTC < 1:9563628/32‑1 cCCCCCCCACCAGTAAATTGTCGCCGGAGAGACTC < 1:13285518/34‑1 tCCCCCCACCAGTAAATTGTCGCCGGAGAGACTCC < 1:16044502/34‑1 CCCCCCCACCAGTAAATTGTCGCCGGAGAGACTCC < 1:11719300/35‑1 CCCCCCACCAGTAAATTGTCGCCGGAGAGACTCCG < 1:9264673/35‑1 CCCCCACCAGTAAATTGTCGCCGGAGAGACTCCGG < 1:652926/35‑1 CCCCACCAGTAAATTGTCGCCGGAGAGACTCCGGT < 1:12226152/35‑1 CCCACCAGTAAATTGTCGCCGGAGAGACTCCGGTT < 1:15218677/35‑1 CCACCAGTAAATTGTCGCCGGAGAGACTCCGGTTA > 1:10772502/1‑35 CACCAGTAAATTGTCGCCGGAGAGACTCCGGTTAT > 1:3449838/1‑35 CACCAGTAAATTGTCGCCGGAGAGACTCCGGTTAT < 1:19160850/35‑1 CACCAGTAAATTGTCGCCGGAGAGACTCCGGTTAT < 1:8847384/35‑1 CACCAGTAAATTGTCGCCGGAGAGACTCCGGTTAT > 1:9203392/1‑35 ACCAGTAAATTGTCGCCGGAGAGACTCCGGTTATT < 1:4752067/35‑1 ACCAGTAAATTGTCGCCGGAGAGACTCCGGTTATT < 1:14252286/35‑1 CCAGTAAATTGTCGCCGGAGAGACTCCGGTTAgat > 1:10838360/1‑32 CCAGTAAATTGTCGCCGGAGAGACTCCGGTTATTA < 1:5248395/35‑1 CCAGTAAATTGTCGCCGGAGAGACTCCGGTTATTA < 1:14193213/35‑1 CAGTAAATTGTCGCCGGAGAGACTCCGGTTATTAT > 1:9205534/1‑35 CAGTAAATTGTCGCCGGAGAGACTCCGGTTATTAT > 1:8075755/1‑35 CAGTAAATTGTCGCCGGAGAGACTCCGGTTATTAT < 1:16887462/35‑1 CAGTAAATTGTCGCCGGAGAGACTCCGGTTATTAT > 1:20457041/1‑35 TACTTCATGCCCATTTATGCCCGATGTTTCCCCCCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/294242‑294204 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccAGTAAATTGTCGCCGGAGAGACTCCGGTTATTAT < REL606/2574914‑2574881 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |