New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 699047 | 102 (0.990) | 3 (0.040) | 3/36 | NT | 4.6% | coding (1314/1320 nt) | potE | putrescine/proton symporter: putrescine/ornithine antiporter |
? | REL606 | 1115826 = | 48 (0.620) | coding (428/834 nt) | csgG | outer membrane lipoprotein |
GATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/699008‑699047 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaccgATAATCGAACCTTCAACCATGATATTTGCCGCCG > REL606/1115826‑1115859 GATCATTCAATCGCCCTTTTTTACTTTGTTTTATT > 1:6618664/1‑35 GATCATTCAATCGCCCTTTTTTACTTTGTTTTATT > 1:5862578/1‑35 GATCATTCAATCGCCCTTTTTTACTTTGTTTTATT < 1:229788/35‑1 GATCATTCAATCGCCCTTTTTTACTTTGTTTTATT > 1:19442005/1‑35 GATCATTCAATCGCCCTTTTTTACTTTGTTTTATT > 1:11309864/1‑35 GATCATTCAATCGCCCTTTTTTACTTTGTTTTATT > 1:17670832/1‑35 GATCATTCAATCGCCCTTTTTTACTTTGTTTTATT > 1:17557592/1‑35 GATCATTCAATCGCCCTTTTTTACTTTGTTTTATT < 1:11723625/35‑1 GATCATTCAATCGCCCTTTTTTACTTTGTTTTATT > 1:152683/1‑35 GATCATTCAATCGCCCTTTTTTACTTTGTTTTATT < 1:15172846/35‑1 ATCATTCAATCGCCCTTTTTTACTTTGTTTTATTA > 1:10890066/1‑35 ATCATTCAATCGCCCTTTTTTACTTTGTTTTATTA > 1:14788908/1‑35 ATCATTCAATCGCCCTTTTTTACTTTGTTTTATTA > 1:12804960/1‑35 TCATTCAATCGCCCTTTTTTACTTTGTTTTATTAg > 1:180641/1‑34 TCATTCAATCGCCCTTTTTTACTTTGTTTTATTAA < 1:4224091/35‑1 TCATTCAATCGCCCTTTTTTACTTTGTTTTATTAA < 1:14655010/35‑1 TCATTCAATCGCCCTTTTTTACTTTGTTTTATTAA > 1:11573305/1‑35 TCATTCAATCGCCCTTTTTTACTTTGTTTTATTAA > 1:1200598/1‑35 TCATTCAATCGCCCTTTTTTACTTTGTTTTATTAA < 1:11397424/35‑1 TCATTCAATCGCCCTTTTTTACTTTGTTTTATTAA > 1:1014720/1‑35 TCATTCAACCGCCCTTTTTTACTTTGTTTTATTAA > 1:20126239/1‑35 CATTCAATCGCCGTTTTTTACTTTGTTTTATTAAC > 1:29362/1‑35 CATTCAATCGCCCTTTTTTACTTTGTTTTATTAAC > 1:20548580/1‑35 CATTCAATCGCCCTTTTTTACTTTGTTTTATTAAC < 1:13606972/35‑1 CATTCAATCGCCCTTTTTTACTTTGTTTTATTAAC > 1:2288467/1‑35 CATTCAATCGCCCTTTTTTACTTTGTTTTATTAAC > 1:15491994/1‑35 ATTCAATCGCCCTTTTTTACTTTGTTTTATTAACC < 1:2209759/35‑1 ATTCAATCGCCCTTTTTTACTTTGTTTTATTAACC > 1:3535732/1‑35 ATTCAATCGCCCTTTTTTACTTTGTTTTATTAACC < 1:15157095/35‑1 ATTCAATCGCCCTTTTTTACTTTGTTTTATTAACC < 1:15816741/35‑1 ATTCAATCGCCCTTTTTTACTTTGTTTTATTAACC < 1:13159026/35‑1 ATTCAATCGCCCTTTTTTACTTTGTTTTATTAACC < 1:9771618/35‑1 TTCAATCGCCCTTTTTTACTTTGTTTTATTAACCG < 1:7117053/35‑1 TTCAATCGCCCTTTTTTACTTTGTTTTATTAACCG < 1:5819730/35‑1 TTCAATCGCCCTTTTTTACTTTGTTTTATTAACCG < 1:1757624/35‑1 TTCAATCGCCCTTTTTTACTTTGTTTTATTAACCG > 1:1412544/1‑35 TTCAATCGCCCTTTTTTACTTTGTTTTATTAACCG < 1:13378566/35‑1 TTTTTTTTATTAACCGATAATCGAACCTTCAACCA < 1:8154830/35‑1 TGTTTTATTAACCGATAATCGAACCTTCAACCATG < 1:1042575/35‑1 TTTTATTACCCGATAATCGAACCTTCAACCATGAT < 1:4410517/35‑1 TTTTTTAACCGATAATCGAACCTTCAACCATGATA < 1:10364598/35‑1 TTATTACCCGATAATCGAACCTTCAACCATGATAT < 1:7347313/35‑1 TATTACCCGATAATCGAACCTTCAACCATGATATT < 1:12576869/35‑1 ttaAACCGATAATCGAACCTTCAACCATGATATTT < 1:18270046/32‑1 tTTACCCGATAATCGAACCTTCAACCATGATATTT < 1:19436601/34‑1 tTTACCCGATAATCGAACCTTCAACCATGATATTT < 1:16650938/34‑1 TTACCCGATAATCGAACCTTCAACCATGATATTTG < 1:1609221/35‑1 tacCCGATAATCGAACCTTCAACCATGATATTTGC < 1:9138567/32‑1 aacCCGATAATCGAACCTTCAACCATGATATTTGC < 1:1334634/32‑1 TAACCGATAATCGAACCTTCAACCATGATATTTGC > 1:15322215/1‑35 acCCGATAATCGAACCTTCAACCATGATATTTGCC < 1:15023743/33‑1 acCCGATAATCGAACCTTCAACCATGATATTTGCC < 1:10563753/33‑1 AACCGATAATCGAACCTTCAACCATGATATTTGCC > 1:10990672/1‑35 AACCGATAATCGAACCTTCAACCATGATATTTGCC > 1:8854644/1‑35 AACCGATAATCGAACCTTCAACCATGATATTTGCC > 1:14558672/1‑35 cCCGATAATCGAACCTTCAACCATGATATTTGCCG < 1:19909414/34‑1 cCCGATAATCGAACCTTCAACCATGATATTTGCCG < 1:16377686/34‑1 ACCGATAATCGAACCTTCAACCATGATATTTGCCG > 1:2457518/1‑35 ACCGATAATCGAACCTTCAACCATGATATTTGCCG > 1:9491175/1‑35 ACCGATAATCGAACCTTCAACCATGATATTTGCCG > 1:12459575/1‑35 ACCGATAATCGAACCTTCAACCATGATATTTGCCG > 1:8005977/1‑35 CCGATAATCGAACCTTCAACCATGATATTTGCCGC < 1:9204716/35‑1 CCGATAATCGAACCTTCAACCATGATATTTGCCGC < 1:18107064/35‑1 CCGATAATCGAACCTTCAACCATGATATTTGCCGC > 1:8011588/1‑35 CCGATAATCGAACCTTCAACCATGATATTTGCCGC > 1:7119290/1‑35 CGATAATCGAACCTTCAACCATGATATTTGCCGCC > 1:12578887/1‑35 CGATAATCGAACCTTCAACCATGATATTTGCCGCC > 1:12094488/1‑35 CGATAATCGAACCTTCAACCATGATATTTGCCGCC > 1:11327226/1‑35 CGATAATCGAACCTTCAACCATGATATTTGCCGCC > 1:19333584/1‑35 CGATAATCGAACCTTCAACCATGATATTTGCCGCC > 1:20313118/1‑35 CGATAATCGAACCTTCAACCATGATATTTGCCGCC < 1:20436379/35‑1 GATAATCGAACCTTCAACCATGATATTTGCCGCCG > 1:7290782/1‑35 GATAATCGAACCTTCAACCATGATATTTGCCGCCG > 1:7270096/1‑35 GATAATCGAACCTTCAACCATGATATTTGCCGCCG > 1:18387387/1‑35 GATAATCGAACCTTCAACCATGATATTTGCCGCCG > 1:14396925/1‑35 GATAATCGAACCTTCAACCATGATATTTGCCGCCG > 1:20139421/1‑35 GATAATCGAACCTTCAACCATGATATTTGCCGCCG > 1:9539325/1‑35 GATCATTCAATCGCCCTTTTTTACTTTGTTTTATTAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/699008‑699047 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaccgATAATCGAACCTTCAACCATGATATTTGCCGCCG > REL606/1115826‑1115859 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |