New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 588495 = | NA (NA) | 5 (0.050) | 4/44 | NT | NA | noncoding (1/1977 nt) | IS150 | repeat region |
? | REL606 | 589936 = | NA (NA) | noncoding (387/768 nt) | IS1 | repeat region |
Only 100 of 249 total aligned reads displayed.
ATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/588521‑588495 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > REL606/589936‑589969 nnCGTNNAACAAAATGGGTGCAGTACACTGTTCGT < 1:19895980/33‑1 AACAAAATGGGTGCAGTACACTGTTCGTCCATTTC < 1:140212/35‑1 cACACTGTTCGTCAATTTCCGCGCAGACGATGACG < 1:3920168/34‑1 caACTGTTCGTCCATTTCCGCGCAGACGATGACGT < 1:17564121/33‑1 CACTGTTCGTCCATTTCCGCGCAGACGGTGACGTC < 1:12298214/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGcc > 1:17893363/1‑33 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:14258073/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:14457921/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:4357812/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:15187023/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:3604858/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:3114324/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:2945829/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:15675593/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:2280101/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:16227682/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:20531887/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:1655822/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:16753513/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:19064989/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:18551641/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:17847944/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:9622021/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:10321017/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:9151283/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:10590189/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:10656144/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:9022300/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:882021/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:8198480/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:810977/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:711338/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC > 1:6861417/1‑35 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:675807/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:6100320/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:593843/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:12729544/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:12788813/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:5320666/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:5084583/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:4906721/35‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:4801526/35‑1 CACTGTTCGTCCATTTCAGCGCAGACGATGACGTC < 1:27802/35‑1 CACGGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:4407591/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATTACGTCA > 1:20017148/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACTTCA > 1:10030872/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGaga > 1:16526428/1‑32 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCN < 1:8878426/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:4638258/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:13776562/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:13520212/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:1331527/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:5375836/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:5489806/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:124486/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:11773145/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:11737447/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:1161069/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:7433167/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:7594600/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:771808/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:1139635/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:11207756/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:8571387/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:8641076/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:10914041/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:8966240/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:1080301/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:10444940/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:9282621/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:9568080/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:17674186/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:17663617/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:18040409/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:18349710/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:17507247/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:18932561/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:17263305/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:19396966/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:19624671/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:16678525/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:20516110/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:1614388/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:2544497/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:2607118/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:15561648/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:328477/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:3478055/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:15398256/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:3694303/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:14765894/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:412858/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA < 1:14623921/35‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > 1:1413676/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACGGCA > 1:17029893/1‑35 ACTGTTCGTCCATTTCCGCGCAGACGATGACCTCA > 1:1148329/1‑35 ACTGTTCGTCAATTTCCGCGCAGACGATGACGTCA < 1:15597014/35‑1 ACTGTTCGCCCATTTCCGCGCAGACGATGACGTCA < 1:13431848/35‑1 ACTGTTCCTCCATTTCCGCGCAGACGATGACGTCA > 1:15933530/1‑35 ACTGTCCGTCCATTTCCGCGCAGACGATGACGTCA < 1:5543345/35‑1 ATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/588521‑588495 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTGTTCGTCCATTTCCGCGCAGACGATGACGTCA > REL606/589936‑589969 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |