New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 149942988 (0.860)12 (0.150) 6/38 NT 14.1% coding (1346/2127 nt) ECB_01413 conserved hypothetical protein
?REL606 1692278 = 76 (0.930)coding (806/864 nt) pdxY pyridoxine kinase

GGTGATTGTGGACTTCCTCAACGGCGACCCGGACCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/1499391‑1499429
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccACCACTTGCAGCTCATATTCCTGCATTGCTTTGG  >  REL606/1692278‑1692311
                                                                         
GGTGATTGTGGACTTCCTCAACGGCGACCCGGACC                                        >  1:3883475/1‑35
GGTGATTGTGGACTTCCTCAACGGCGACCCGGACC                                        <  1:2574381/35‑1
GGTGATTGTGGACTTCCTCAACGGCGACCCGGACC                                        >  1:5647126/1‑35
 GTGATTGTGGACTTCCTCAACGGCGACCCGGACCA                                       >  1:20243580/1‑35
 GTGATTGTGGACTTCCTCAACGGCGACCCGGACCA                                       <  1:8557465/35‑1
 GTGATTGTGGACTTCCTCAACGGCGACCCGGACCA                                       <  1:7650635/35‑1
 GTGATTGTGGACTTCCTCAACGGCGACCCGGACCA                                       >  1:17490006/1‑35
 GTGATTGTGGACTTCCTCAACGGCGACCCGGACCA                                       <  1:6652776/35‑1
 GTGATTGTGGACTTCCTCAACGGCGACCCGGACCA                                       <  1:3486276/35‑1
 GTGATTGTGGACTTCCTCAACGGCGACCCGGACCA                                       >  1:13979550/1‑35
 GTGATTGTGGACTTCCTCAACGGCGACCCGGACCA                                       >  1:12258837/1‑35
 GTGATTGTGGACTTCCTCAACGGCGACCCGGACCA                                       <  1:16585140/35‑1
  TGATTGTGGACTTCCTCAACGGCGACCCGGACCAG                                      >  1:3568732/1‑35
  TGATTGTGGACTTCCTCAACGGCGACCCGGACCAG                                      <  1:16841367/35‑1
  TGATTGTGGACTTCCTCAACGGCGACCCGGACCAG                                      >  1:12414024/1‑35
  TGATTGTGGACTTCCTCAACGGCGACCCGGACCAG                                      <  1:2422241/35‑1
  TGATTGTGGACTTCCTCAACGGCGACCCGGACCAG                                      <  1:6222803/35‑1
   GATTGTGGACTTCTTCAACGGCGACCCGGACCAGC                                     <  1:5702449/35‑1
   GATTGTGGACTTCCTCAACGGCGACCCGGACCAGC                                     >  1:2115935/1‑35
   GATTGTGGACTTCCTCAACGGCGACCCGGACCAGC                                     >  1:10626966/1‑35
    atgGTGGACTTCCTCAACGGCGACCCGGACCAGCC                                    <  1:13471007/32‑1
    ATTTTGGACTTCCTCAACGGCGACCCGGACCAGCC                                    >  1:5164128/1‑35
    ATTGTGGACTTCCTCAACGGCGACCCGGACCAGCC                                    >  1:16644253/1‑35
    ATTGTGGACTTCCTCAACGGCGACCCGGACCAGCC                                    >  1:13642257/1‑35
    ATTGTGGACTTCCTCAACGGCGACCCGGACCAGCC                                    >  1:5871809/1‑35
    ATTGTGGACTTCCTCAACGGCGACCCGGACCAGCC                                    >  1:7086389/1‑35
    ATTGTGGACTTCCTCAACGGCGACCCGGACCAGCC                                    >  1:7351034/1‑35
      TGTGGACTTCCTCAACGGCGACCCGGACCAGCagc                                  >  1:3621902/1‑32
                       aCGACCCGGACCAGCCACCACTTGCAGCTCATATT                 <  1:4651952/34‑1
                       GCGACCCGGACCAGCCACCACTTGCAGCTCATATT                 <  1:276754/35‑1
                        cgcCCCGGACCAGCCACCACTTGCAGCTCATATTC                <  1:13427519/32‑1
                        CGACCCTGACCAGCCACCACTTGCAGCTCATATTC                <  1:8643418/35‑1
                        CGACCCGGACCAGCCACCACTTGCAGCTCATATTC                <  1:10084924/35‑1
                         gatCCGGACCAGCCACCACTTGCAGCTCATATTCC               <  1:11736599/32‑1
                         GACCCGGACCAGCCACCACTTGCAGCTCATGTTCC               <  1:9823831/35‑1
                          ACCCTGACCAGCCACCACTTGCAGCTCATATTCCT              <  1:11464230/35‑1
                          ACCCGGACCAGCCACCACTTGCAGCTCATATTCCT              <  1:9003864/35‑1
                           tCCGGACCAGCCACCACTTGCAGCTCATATTCCTG             <  1:3610192/34‑1
                           CCCGGCCCAGCCACCACTTGCAGCTCATATTCCTG             <  1:18738431/35‑1
                            CCGGACCAGCCACCACTTGCAGCTCATATTACTGC            <  1:1376535/35‑1
                             CGGGCCAGCCACCACTTGCAGCTCATATTCCTGCA           <  1:6739339/35‑1
                             CGGCCCAGCCACCACTTGCAGCTCATATTCCTGCA           <  1:15982189/35‑1
                             CGGACCAGCCACCACTTGCAGCTCATATTCCTGCA           <  1:15072871/35‑1
                              tGACCAGCCACCACTTGCAGCTCATATTCCTGCAT          <  1:11901462/34‑1
                              gggCCAGCCACCACTTGCAGCTCATATTCCTGCAT          <  1:9574507/32‑1
                              GGACCAGCCACCACTTGCAGCTCATATTCCTGCAT          <  1:16324782/35‑1
                               gcCCAGCCACCACTTGCAGCTCATATTCCTGCATT         <  1:4317513/33‑1
                               gcCCAGCCACCACTTGCAGCTCATATTCCTGCATT         <  1:9942067/33‑1
                               cgCCAGCCACCACTTGCAGCTCATATTCCTGCATT         <  1:6847400/33‑1
                               aACCAGCCACCACTTGCAGCTCATATTCCTGCATT         <  1:16675901/34‑1
                               GACCAGCCACCACTTGCAGCTCATATTCCTGCATT         <  1:6753775/35‑1
                                gCCAGCCACCACTTGCAGCTCATATTCCTGCATTN        <  1:179258/34‑1
                                cCCAGCCACCACTTGCAGCTCATATTCCTGCATTG        <  1:9071237/34‑1
                                cCCAGCCACAACTTGCAGCTCATATTCCTGCATTG        <  1:6895095/34‑1
                                cCCAGCCACAACTTGCAGCTCATATTCCTGCATTG        <  1:777253/34‑1
                                ACCAGCCACCACTTGCAGATCATATTCCTGCATTG        <  1:517149/35‑1
                                 CCAGCCACCACTTGCAGCTCATATTCCTGCATTGC       <  1:5017184/35‑1
                                 CCAGCCACCACTTGCAGCTCATATTCCTGCATTGC       <  1:2742952/35‑1
                                  CAGCCACCACTTGCAGCTCATATTCCTGCATTGCT      <  1:7655294/35‑1
                                  CAGCCACCACTTGCAGCTCATATTCCTGCATTGCT      >  1:17405769/1‑35
                                  CAGCCACCACTTGCAGCTCATATTCCTGCATTGCN      <  1:8302122/35‑1
                                   AGCCACCACTTGCAGCTCATATTCCTGCATTGCTT     >  1:12598625/1‑35
                                   AGCCACCACTTGCAGCTCATATTCCTGCATTGCTT     >  1:15634409/1‑35
                                   AGCCACCACTTGCAGCTCATATTCCTGCATTGCTT     >  1:3320896/1‑35
                                    GCCACCACTTGCAGCTCATATTCCTGCATTGCTTT    <  1:11259288/35‑1
                                    GCCACCACTTGCAGCTCATATTCCTGCATTGCTTT    >  1:10687993/1‑35
                                    GCCACCACTTGCAGCTCATATTCCTGCATTGCTTT    <  1:14619797/35‑1
                                    GCCACCACTTGCAGCTCATATTCCTGCATTGCTTT    <  1:10106947/35‑1
                                    GCCACCACTTGCAGCTCATATTCCTGCATTGCTTT    >  1:2600830/1‑35
                                     CCACCACTTGCAGCTCATATTCCTGCATTGCTTTG   <  1:5979930/35‑1
                                     CCACCACTTGCAGCTCATATTCCTGCATTGCTTTG   <  1:1119625/35‑1
                                     CCACCACTTGCAGCTCATATTCCTGCATTGCTTTG   >  1:12799039/1‑35
                                     CCACCACTTGCAGCTCATATTCCTGCATTGCTTTG   >  1:181136/1‑35
                                     CCACAACTTGCAGCTCATATTCCTGCATTGCTTTG   <  1:18608239/35‑1
                                      CACCACTTGCAGCTCATATTCCTGCATTGCTTTGG  <  1:15246666/35‑1
                                      CACCACTTGCAGCTCATATTCCTGCATTGCTTTGG  <  1:16900374/35‑1
                                                                         
GGTGATTGTGGACTTCCTCAACGGCGACCCGGACCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/1499391‑1499429
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccACCACTTGCAGCTCATATTCCTGCATTGCTTTGG  >  REL606/1692278‑1692311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.