New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1213353 | 36 (0.350) | 4 (0.060) | 3/30 | NT | 9.5% | intergenic (‑85/+136) | ycgX/ycgE | hypothetical protein/predicted DNA‑binding transcriptional regulator |
? | REL606 | = 4512602 | 54 (0.840) | coding (720/747 nt) | yjhP | predicted methyltransferase |
CACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1213311‑1213353 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttggctgGGGCGTGTTCGCACTCATCGCCCGGTAACAACAG < REL606/4512602‑4512569 CACGATCGGTTTTACCACTTCAATCTGGTCTGTCC < 1:7667034/35‑1 ACGATCGGTTTTACCACTTCAATCTGGTCTGTCCT > 1:1454742/1‑35 ACGATCGGTTTTACCACTTCAATCTGGTCTGTCCT < 1:12723328/35‑1 CGATCGGTTTTACCACTTCAATCTGGTCTGTCCTT > 1:381434/1‑35 CGATCGGTTTTACCACTTCAATCTGGTCTGTCCTT < 1:14749721/35‑1 GATCGGTTTTACCACTTCAATCTGGTCTGTCCTTT > 1:10618731/1‑35 GATCGGTTTTACCACTTCAATCTGGTCTGTCCTTT > 1:5583566/1‑35 GATCGGTTTTACCACTTCAATCTGGTCTGTCCTTT > 1:6721627/1‑35 ATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTG > 1:11578791/1‑35 CGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGC > 1:18090540/1‑35 GGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCT > 1:3728182/1‑35 GTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTG > 1:9945535/1‑35 GTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTG < 1:11696163/35‑1 GTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTG < 1:9450839/35‑1 GTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTG > 1:4142191/1‑35 GTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTG > 1:18732431/1‑35 GTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTG < 1:17006481/35‑1 TTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGG > 1:9040781/1‑35 TTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGG > 1:17512850/1‑35 TTTACCACTTCAATCTGGTCTGTCCTTTGGCTGGG > 1:18101977/1‑35 TTTACCACTTCAATCTGGTCTGTCCTTTGGCTGGG > 1:8317961/1‑35 TTTACCACTTCAATCTGGTCTGTCCTTTGGCTGGG > 1:2719290/1‑35 TTACCACTTCAATCTGGTCTGTCCTTTGGCTGGGG > 1:12367271/1‑35 TACCACTTCAATCTGGTCTGTCCTTTGGCTGGGGg > 1:3003153/1‑34 TACCACTTCAATCTGGTCTGTCCTTTGGCTGGGGg > 1:16285893/1‑34 ACCACTTCAATCTGGTCTGTCCTTTGGCTGGGGgg > 1:10282912/1‑33 ACCACTTCAATCTGGTCTGTCCTTTGGCTGGGGgg > 1:13666154/1‑33 CCACTTCAATCTGGTCTGTCCTTTGGCTGGGGggg > 1:4211252/1‑32 CCACTTCAATCTGGTCTGTCCTTTGGCTGGGGGGT > 1:16098677/1‑35 CACTTCAATCTGGTCTGTCCTTTGGCTGGGGGGTG > 1:1996850/1‑35 ACTTCAATCTGGTCTGTCCTTTGGCTGGGGGGTGg > 1:10349426/1‑34 CTTCAATCTGGTCTGTCCTTTGGCTGGGGGGTGTT > 1:32446/1‑35 CTTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGT < 1:1856579/35‑1 CTTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGT > 1:17150137/1‑35 TTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTA < 1:3006353/35‑1 TTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTA > 1:15825540/1‑35 TTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTA < 1:12618953/35‑1 TTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTA > 1:13897757/1‑35 TTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTA > 1:16371884/1‑35 TTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTA < 1:5199706/35‑1 TTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTA > 1:2490115/1‑35 TTGGCTGGTGCGTGTTCGCACTCATCGCCCGGTAA > 1:16783554/1‑35 TTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAA < 1:3146775/35‑1 TTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAA > 1:20471189/1‑35 TTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAA < 1:17492339/35‑1 TTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAA < 1:17531671/35‑1 TTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAA < 1:7824901/35‑1 TGGCTGGGGCGTGTTCGCACTCATTGCCCGGTAAC < 1:5099512/35‑1 TGGCTGGGGCGTGTTCGCACTCATCGCCCGGTGAC < 1:11084962/35‑1 TGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAAC < 1:20544471/35‑1 TGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAAC < 1:5131829/35‑1 TGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAAC < 1:4515790/35‑1 GGCTGGGGCGTGTTCGCACTCATCGCCCGGTAACA < 1:5985667/35‑1 GGCTGGGGCGTGTTCGCACTCATCGCCCGGTAACA > 1:2235557/1‑35 GGCTGGGGCGTGTTCGCACTCATCGCCCGGTAACA > 1:17552912/1‑35 GGCTGGGGCGTGTTCGCACTCATCGCCCGGTAACA > 1:15340886/1‑35 ctTGGGGCGTGTTCGCACTCATCGCCCGGTAACAA < 1:17040178/33‑1 ctTGGGGCGTGTTCGCACTCATCGCCCGGTAACAA < 1:17569471/33‑1 GCTGGGGCGTGTTCGCACTCATCGCCCGGTAACAA < 1:5579130/35‑1 GCTGGGGCGTGTTCGCACTCATCGCCCGGTAACAA < 1:741177/35‑1 GCTGGGGCGTGTTCGCACTCATCGCCCGGTAACAA < 1:8188745/35‑1 GCTGGGGCGTGTTCGCACTCATCGCCCGGCAACAA > 1:5145869/1‑35 CTGGGGCGTGTTCGCACTCATCGCCCGGTAACAAC < 1:10248730/35‑1 CTGGGGCGTGTTCGCACTCATCGCCCGGTAACAAC > 1:5714748/1‑35 CTGGGGCGTGTTCGCACTCATCGCCCGGTAACAAC > 1:2667439/1‑35 CTGGGGCGTGTTCGCACTCATCGCCCGGTAACAAC > 1:959803/1‑35 CTGGGGCGTGTTCGCACTCATCGCCCGGTAACAAC < 1:10387968/35‑1 TGGGGCGTGTTCGCACTCATCGCCCGGTAACAACA < 1:9915432/35‑1 TGGGGCGTGTTCGCACTCATCGCCCGGTAACAACA > 1:5432708/1‑35 TGGGGCGTGTTCGCACTCATCGCCCGGTAACAACA < 1:17947690/35‑1 GGGGCGTGTTCGCACTCATCGCCCGGTAACAACAG > 1:17972211/1‑35 GGGGCGTGTTCGCACTCATCGCCCGGTAACAACAG > 1:7700004/1‑35 GGGGCGTGTTCGCACTCATCGCCCGGTAACAACAG < 1:11242715/35‑1 GGGGCGTGTTCGCACTCATCGCCCGGTAACAACAG > 1:18204880/1‑35 GGGGCGTGTTCGCACTCATCGCCCGGTAACAACAG < 1:3451034/35‑1 GGGGCGTGTTCGCACTCATCGCCCGGTAACAACAG > 1:15583823/1‑35 CACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1213311‑1213353 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttggctgGGGCGTGTTCGCACTCATCGCCCGGTAACAACAG < REL606/4512602‑4512569 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |