New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1306326 =88 (0.860)10 (0.170) 3/28 NT 18.1% intergenic (‑87/+284) cls/kch cardiolipin synthetase/voltage‑gated potassium channel
?REL606 = 2380515 39 (0.650)coding (929/1137 nt) pdxB erythronate‑4‑phosphate dehydrogenase

Only 100 of 141 total aligned reads displayed.

GCGGCGCACATCATACACCAAATGCACCAGCCTTTTCAGCGTCGGTTGATCGAGCGGGCCATGCAGCGT  >  REL606/2380481‑2380549
                                  |                                  
gcggcgCACATCATACACCAAATGCACCAGCCttt                                    <  1:10522180/35‑1 (MQ=255)
gcggcgCACATCATACACCAAATGCACCAGCCttt                                    >  1:10920516/1‑35 (MQ=255)
 cggcgCACATCATACACCAAATGCACCAGCCTTTt                                   >  1:16777516‑M2/1‑34 (MQ=255)
 cggcgCACATCATACACCAAATGCACCAGCCTTTt                                   <  1:20115132‑M2/35‑2 (MQ=255)
 cggcgCACATCATACACCAAATGCACCAGCCTTTt                                   <  1:14202863‑M2/35‑2 (MQ=255)
  ggcgCACATCATACACCAAATGCACCAGCCTTTtc                                  >  1:9517762‑M2/1‑33 (MQ=255)
  ggcgCACATCATACACCAAATGCACCAGCCTTTtc                                  >  1:9156224‑M2/1‑33 (MQ=255)
  ggcgCACATCATACACCAAATGCACCAGCCTTTtc                                  <  1:5128147‑M2/35‑3 (MQ=255)
   gcgcACATCATACACCAAATGCACCAGCCTTTtca                                 <  1:20551576‑M2/35‑4 (MQ=255)
   gcgcACATCATACACCAAATGCACCAGCCTTTtca                                 >  1:12078481‑M2/1‑32 (MQ=255)
   gcgcACATCATACACCAAATGCACCAGCCTTTtca                                 >  1:5328430‑M2/1‑32 (MQ=255)
    gcgacaTCATACACCAAATGCACCAGCCTTCTCAg                                >  1:16313403/4‑35 (MQ=37)
    cgcACATCATACACCAAATGCACCAGCCTTTtcag                                <  1:4476186‑M2/35‑5 (MQ=255)
    cgcACATCATACACCAAATGCACCAGCCTTTtcag                                >  1:14150806‑M2/1‑31 (MQ=255)
     gcACATCATACACCAAATGCACCAGCCTTTtcagc                               >  1:18722131‑M2/1‑30 (MQ=255)
     gcACATCATACACCAAATGCACCAGCCTTTtcagc                               >  1:19363973‑M2/1‑30 (MQ=255)
     gcACATCATACACCAAATGCACCAGCCTTTtcagc                               >  1:4977536‑M2/1‑30 (MQ=255)
     gcACATCATACACCAAATGCACCAGCCTTTtcagc                               >  1:12818719‑M2/1‑30 (MQ=255)
     gcACATCATACACCAAATGCACCAGCCTTTtcagc                               <  1:10171241‑M2/35‑6 (MQ=255)
     gcACATCATACACCAAATGCACCAGCCTTTtcagc                               <  1:13010417‑M2/35‑6 (MQ=255)
     gcACATCATACACCAAATGCACCAGCCTTTtcagc                               >  1:13161140‑M2/1‑30 (MQ=255)
     gcACATCATACACCAAATGCACCAGCCTTTtcagc                               >  1:2902803‑M2/1‑30 (MQ=255)
     gcACATCATACACCAAATGCACCAGCCTTTtcagc                               <  1:14908225‑M2/35‑6 (MQ=255)
     gcACATCATACACCAAATGCACCAGCCTTTtcagc                               <  1:14483490‑M2/35‑6 (MQ=255)
      cacaTCATACACCAAATGCACCAGCCTTTtcagcg                              <  1:20015667‑M2/35‑7 (MQ=255)
      cacaTCATACACCAAATGCACCAGCCTTTtcagcg                              >  1:8970726‑M2/1‑29 (MQ=255)
      cacaTCATACACCAAATGCACCAGCCTTTtcagcg                              >  1:18188374‑M2/1‑29 (MQ=255)
      cacaTCATACACCAAATGCACCAGCCTTTtcagcg                              <  1:17461712‑M2/35‑7 (MQ=255)
      cacaTCATACACCAAATGCACCAGCCTTTtcagcg                              >  1:7804073‑M2/1‑29 (MQ=255)
       acaTCATACTCCAAATGCACCAGCCTTTtcagcgt                             <  1:15609913‑M2/35‑8 (MQ=255)
       acaTCATACACCAAATGCACCAGCCTTTtcagcgt                             <  1:18275543‑M2/35‑8 (MQ=255)
       acaTCATACACCAAATGCACCAGCCTTTtcagcgt                             <  1:10092681‑M2/35‑8 (MQ=255)
       acaTCATACACCAAATGCACCAGCCTTTtcagcgt                             <  1:18615944‑M2/35‑8 (MQ=255)
       acaTCATACACCAAATGCACCAGCCTTTtcagcgt                             <  1:9236788‑M2/35‑8 (MQ=255)
       acaTCATACACCAAATGCACCAGCCTTTtcagcgt                             >  1:8479127‑M2/1‑28 (MQ=255)
       acaTCATACACCAAATGCACCAGCCTTTtcagcgt                             <  1:13383587‑M2/35‑8 (MQ=255)
        catcatACACCAAATGCACCAGCCTTTtcagcgtc                            >  1:19488525‑M2/1‑27 (MQ=255)
        catcatACACCAAATGCACCAGCCTTTtcagcgtc                            >  1:3731328‑M2/1‑27 (MQ=255)
        catcatACACCAAATGCACCAGCCTTTtcagcgtc                            >  1:7030355‑M2/1‑27 (MQ=255)
         atcatACACCAAATGCACCGGCCTTTtcagcgtcg                           >  1:163039‑M2/1‑26 (MQ=255)
         atcatACACCAAATGCACCAGCCTTTtcagcgtcg                           >  1:6378456‑M2/1‑26 (MQ=255)
         atcatACACCAAATGCACCAGCCTTTtcagcgtcg                           >  1:14885115‑M2/1‑26 (MQ=255)
         atcatACACCAAATGCACCAGCCTTTtcagcgtcg                           >  1:9410688‑M2/1‑26 (MQ=255)
          tcatACACCAAATGCACCAGCCTTTtcagcgtctg                          <  1:13382392‑M2/35‑11 (MQ=255)
          tcatACACCAAATGCACCAGCCTTTtcagcgtcgg                          <  1:7039273‑M2/35‑11 (MQ=255)
          tcatACACCAAATGCACCAGCCTTTtcagcgtcgg                          <  1:11264116‑M2/35‑11 (MQ=255)
          tcatACACCAAATGCACCAGCCTTTtcagcgtcgg                          <  1:16423013‑M2/35‑11 (MQ=255)
           catACACCAAATGCACCAGCCTTTTCAGCGTCGGt                         <  1:8210152/35‑1 (MQ=255)
           catACACCAAATGCACCAGCCTTTTCAGCGTCGGt                         <  1:18143703/35‑1 (MQ=255)
           catACACCAAATGCACCAGCCTTTTCAGCGTCGGt                         <  1:20466569/35‑1 (MQ=255)
            atACACCAAATGCACCAGCCTTTTCAGCGTCGGtt                        <  1:15692973/35‑1 (MQ=255)
            atACACCAAATGCACCAGCCTTTTCAGCGTCGGtt                        <  1:3150292/35‑1 (MQ=255)
            atACACCAAATGCACCAGCCTTTTCAGCGTCGGtt                        <  1:19741724/35‑1 (MQ=255)
             tACACCAAATGCACCAGCCTTTtcagcgtcggggg                       <  1:5281915‑M2/35‑14 (MQ=255)
             tACACCAAATGCACCAGCCTTTtcagcgtcggggg                       <  1:7541054‑M2/35‑14 (MQ=255)
             tACACCAAATGCACCAGCCTTTTCAGCGTCGGTTg                       <  1:7651191/35‑1 (MQ=255)
             tACACCAAATGCACCAGCCTTTTCAGCGTCGGTTg                       <  1:8446573/35‑1 (MQ=255)
               ccccAAATGCACCAGCCTTTTCAGCGTCGGTTGAt                     <  1:4211521/33‑1 (MQ=255)
                acCAAATGCACCAGCCTTTtcagcgtcgggggggg                    <  1:17395240‑M2/35‑17 (MQ=255)
                acCAAATGCACCAGCCTTTtcagcgtcgggggggg                    <  1:12582524‑M2/35‑17 (MQ=255)
                acCAAATGCACCAGCCTTTTCAGCGTCGGTTGATc                    <  1:16838197/35‑1 (MQ=255)
                acCAAATGCACCAGCCTTTTCAGCGTCGGTTGATc                    <  1:3797953/35‑1 (MQ=255)
                acCAAAGGCACCAGCCTTTTCAGCGTCGGTTGATc                    <  1:7857728/35‑1 (MQ=255)
                 ccAAATGCACCAGCCTTTtcagcgtcggggggggg                   <  1:1078414‑M2/35‑18 (MQ=255)
                 ccAAATGCACCAGCCTTTtcagcgtcggggggggg                   <  1:5101163‑M2/35‑18 (MQ=255)
                 ccAAATGCACCAGCCTTTTCAGCGTCGGTTGATCg                   <  1:10068813/35‑1 (MQ=255)
                 ccAAATGCACCAGCCTTTTCAGCGTCGGTTGATCg                   <  1:6053842/35‑1 (MQ=255)
                 ccAAATGCACCAGCCTTTTCAGCGTCGGTTGATCg                   <  1:15476853/35‑1 (MQ=255)
                 ccAAATGCACCAGCCTTTTCAGCGTCGGTTGATCg                   <  1:15127375/35‑1 (MQ=255)
                 ccAAATGCACAAGCCTTTTCAGCGTCGGTTGATCg                   <  1:12991885/35‑1 (MQ=255)
                  cAAATGCACCAGCCTTTtcagcgtcgggggggggg                  <  1:12209947‑M2/35‑19 (MQ=255)
                  cAAATGCACCAGCCTTTTCAGCGTCGGTTGATCGa                  <  1:16128825/35‑1 (MQ=255)
                  cAAATGCACCAGCCTTTTCAGCGTCGGTTGATCGa                  <  1:5772451/35‑1 (MQ=255)
                  cAAATGCACCAGCCTTTTCAGCGTCGGTTGATCGa                  <  1:4229060/35‑1 (MQ=255)
                  cAAATGCACCAGCCTTTTCAGCGTCAGTTGATCGa                  <  1:14329669/35‑1 (MQ=255)
                   aaaTGCACCAGCCTTTtcagcgtcggggggggggg                 <  1:6445589‑M2/35‑20 (MQ=255)
                   aaaTGCACCAGCCTTTTCAGCGTCGGTTGATCggg                 <  1:7442886/35‑3 (MQ=255)
                    aaTGCACCAGCCTTTTCAGCGTCGGTTGATCGAGc                <  1:12813403/35‑1 (MQ=255)
                    aaTGCACCAGCCTTTTCAGCGTCGGTTGATCGAGc                <  1:12461122/35‑1 (MQ=255)
                      tGCACCAGCCTTTTCAGCGTCGGTTGATCGAGCgg              <  1:2570281/35‑1 (MQ=255)
                      tGCACCAGCCTTTTCAGCGTCGGTTGATCGAGCgg              <  1:6742597/35‑1 (MQ=255)
                      tGCACCAGCCTTTTCAGCGTCGGTTGATCGAGCgg              <  1:6804906/35‑1 (MQ=255)
                      tGCACCAGCCTTTTCAGCGTCGGTTGATCGAGCgg              <  1:10707967/35‑1 (MQ=255)
                      tGCACCAGCCTTTTCAGCGTCGGTTGATCGAGCgg              <  1:8034783/35‑1 (MQ=255)
                        tcccAGCCTTTTCAGCGTCGGTTGATCGAGCGGGc            <  1:20366203/33‑1 (MQ=255)
                        cACCAGCCTTTTCAGCGTCGGTTGATCGAGCGGGc            <  1:15672555/35‑1 (MQ=255)
                        cACCAGCCTTTTCAGCGTCGGTTGATCGAGCGGGc            <  1:4511539/35‑1 (MQ=255)
                        cACCAGCCTTTTCAGCGTCGGTTGATCGAGCGGGc            <  1:15315736/35‑1 (MQ=255)
                          ccAGCCTTTTCAGCGTCGGTTGATCGAGCGGGCCa          <  1:4215008/35‑1 (MQ=255)
                           cAGCCTTTTCAGCGTCGGTTGATCGAGCGGGCCAt         <  1:2063490/35‑1 (MQ=255)
                           cAGCCTTTTCAGCGTCGGTTGATCGAGCGGGCCAt         <  1:3445919/35‑1 (MQ=255)
                            aGCCTTTTCAGCGTCGGTTGATCGAGCGGGCCATg        <  1:3685036/35‑1 (MQ=255)
                             gCCTTTTCAGCGTCGGTTGATCGAGCGGGCCATGc       <  1:14883668/35‑1 (MQ=255)
                              ccTTTTCAGCGTCGGTTGATCGAGCGGGCCATGCa      <  1:14081631/35‑1 (MQ=255)
                              ccTTTTCAGCGTCGGTTGATCGAGCGGGCCATGCa      <  1:7199210/35‑1 (MQ=255)
                               tttttCAGCGTCGGTTGATCGAGCGGGCCATGCAg     <  1:6039161/34‑1 (MQ=255)
                               cTTTTCAGCGTCGGTTGATCGAGCGGGCCATGCAg     <  1:356557/35‑1 (MQ=255)
                                 tttCAGCGTCGGTTGATCGAGCGGGCCATGCAGCg   <  1:10554155/35‑1 (MQ=255)
                                  ttCAGCGTCGGTTGATCGAGCGGGCCATGCAGCGt  <  1:12254197/35‑1 (MQ=255)
                                  ttCAGCGTCGGTTGATCGAGCGGGCCATGCAGCGt  <  1:11131711/35‑1 (MQ=255)
                                  |                                  
GCGGCGCACATCATACACCAAATGCACCAGCCTTTTCAGCGTCGGTTGATCGAGCGGGCCATGCAGCGT  >  REL606/2380481‑2380549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.