New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1731442 = | 72 (0.700) | 7 (0.070) | 3/46 | NT | 11.5% | coding (303/627 nt) | ydhY | predicted 4Fe‑4S ferridoxin‑type protein |
? | REL606 | 3480446 = | 39 (0.400) | coding (628/2394 nt) | malP | maltodextrin phosphorylase |
Only 100 of 137 total aligned reads displayed.
ACAGGCCGCCGCCAGAGCCAACCCCGTTGTCGCCAAAGAAATAATTGCGATGGATTTTGATACGGGAGA > REL606/1731408‑1731476 | ccgggCCGCCGCCAGAGCCAACCCCGTTGTCGCCa < 1:4531284/32‑1 (MQ=255) ccgggCCGCCGCCAGAGCCAACCCCGTTGTCGCCa < 1:12231250/32‑1 (MQ=255) accggtcaagcgtgggatctccccgttgtcggcta > 1:3434565‑M1/35‑35 (MQ=255) accggtcaagcgtgggatctccccgttgtcggcta > 1:5241236‑M1/35‑35 (MQ=255) accggtcaagcgtgggatctccccgttgtcggcta < 1:8330811‑M1/1‑1 (MQ=255) aCAGCCCGCCGCCAGAGCCAACCCCGTTGTCGCCa < 1:15217068/35‑1 (MQ=255) aCAGCCCGCCGCCAGAGCCAACCCCGTTGTCGCCa < 1:15442528/35‑1 (MQ=255) ccggtcaagcgtgggatctccccgttgtcggctac < 1:438862‑M1/2‑2 (MQ=255) ccggtcaagcgtgggatctccccgttgtcggctaa < 1:8289746‑M1/2‑1 (MQ=255) ccggtcaagcgtgggatctccccgttgtcggctaa < 1:17242474‑M1/2‑1 (MQ=255) ccggtcaagcgtgggatctccccgttgtcggctaa < 1:15964466‑M1/2‑1 (MQ=255) gggCCGCCGCCAGAGCCAACCCCGTTGTCGCCaaa < 1:6168439/34‑1 (MQ=255) cggtcaagcgtgggatctccccgttgtcggctaaa < 1:11809062‑M1/3‑1 (MQ=255) aGGCCGCCGCCAGAGCCAACCCCGTTGTCGCCaaa > 1:10623711/1‑35 (MQ=255) aGGCCGCCGCCAGAGCCAACCCCGTTGGCGCCaaa > 1:11291809/1‑35 (MQ=255) ggtcaagcgtgggatctccccgttgtcggctaaca < 1:16597841‑M1/4‑3 (MQ=255) gcccgccgccAGAGCCAACCCCGTTGTCGCCAAAg < 1:19217425/33‑1 (MQ=255) gtcaagcgtgggatctccccgttgtcggctaaaca < 1:14405608‑M1/5‑3 (MQ=255) gtcaagcgtgggatctccccgttgtcggctaaaac < 1:1937519‑M1/5‑3 (MQ=255) gtcaagcgtgggatctccccgttgtcggctAAagt < 1:14380300‑M1/5‑2 (MQ=255) gccgccgccAGAGCCAACCCCGTTTTCGCCAAAGa > 1:2790242/1‑35 (MQ=255) gccgccgccAGAGCCAACCCCGTTGTCGCCAAAGa > 1:8877391/1‑35 (MQ=255) cccgccgccAGAGCCAACCCCGTTGTCGCCAAAGa < 1:1241503/34‑1 (MQ=255) cccgccgccAGAGCCAACCCCGTTGTCGCCAAAGa > 1:15651573/2‑35 (MQ=255) tcaagcgtgggatctccccgttgtcggctaaacta < 1:4661173‑M1/6‑4 (MQ=255) ccgccgccAGAGCCAACCCCGTTGTCGCAAAAGaa < 1:15307573/35‑1 (MQ=255) ccccgccAGAGCCAACCCCGTTGTCGCCAAAGaaa < 1:5516082/33‑1 (MQ=255) caagcgtgggatctccccgttgtcggctaaagtaa < 1:10701339‑M1/7‑4 (MQ=255) caagcgtgggatctccccgttgtcggctAAACaaa < 1:7953395‑M1/7‑1 (MQ=255) caagcgtgggatctccccgttgtcggctAAAAaaa < 1:1840389‑M1/7‑1 (MQ=255) gccgccGGAGCCAACCCCGTTGTCGCCAAAGAaat < 1:20266860/35‑1 (MQ=255) gccgccAGAGCCAACCCCGTTGTCGCCAAAGAaat > 1:17213126/1‑35 (MQ=255) aagcgtgggatctccccgttgtcggctAAAgaaaa < 1:10302034‑M1/8‑2 (MQ=255) aagcgtgggatctccccgttgtcggctAAAGAaat < 1:8004776‑M1/8‑1 (MQ=255) ccgccAGAGCCAACCCCGTTGTCGCCAAAGAaata < 1:12396452/35‑1 (MQ=255) ccgccAGAGCAACCCCCGTTGTCGCCAAAGAaata < 1:17607961/35‑1 (MQ=37) agcgtgggatctccccgttgtcggctAAAGtaatg < 1:8399918‑M1/9‑2 (MQ=255) agcgtgggatctccccgttgtcggctAAAGAaata < 1:2379837‑M1/9‑1 (MQ=255) cgccAGAGCCAACCCCGTTGTCGCCAAAGAaataa > 1:1320339/1‑35 (MQ=255) cgccAGAGCCAACCCCGTTGTCGCCAAAGAaataa < 1:7449268/35‑1 (MQ=255) gccAGAGCCAACCCCGTTGTCGCCAAAGAaataat > 1:4494841/1‑35 (MQ=255) cAGAGCCACCCCCGTTGTCGCCAAAGAAATAATTg < 1:3317774/35‑1 (MQ=255) cAGAGCCAACCCCGTTGTCGCCAAAGAAATAATTg > 1:8483701/1‑35 (MQ=255) cAGAGCCAACCCCGTTGTCGCCAAAGAAATAATTg < 1:10102322/35‑1 (MQ=255) cAGAGCCAACCCCGTTGTCGCCAAAGAAATAATTg < 1:13371015/35‑1 (MQ=255) cAGAGCCAACCCCGTTGTCGCCAAAGAAATAATTg < 1:5422114/35‑1 (MQ=255) agagCCAACCCCGTTGTCGCCAAAGAAATAATTGc < 1:1140987/35‑1 (MQ=255) gagCCAACCCCGTTGTCGCCAAAGAAATAATTGCg < 1:18447866/35‑1 (MQ=255) gagCCAACCCCGTTGTCGCCAAAGAAATAATTGCg < 1:10137075/35‑1 (MQ=255) agCCAACCCCGTTGTCGCCAAAGAAATAATTGCGa < 1:7130663/35‑1 (MQ=255) gCCAACCCCGTTGTCGCCAAAGAAATAATTGCGAt > 1:14755858/1‑35 (MQ=255) gCCAACCCCGTTGTCGCCAAAGAAATAATTGCGAt > 1:3412700/1‑35 (MQ=255) gCCAACCCCGTTGTAGCCAAAGAAATAATTGCGAt < 1:15999936/35‑1 (MQ=255) ccAACCCCGTTGTCGCCAAAGAAATAATTGCGATg < 1:5195497/35‑1 (MQ=255) ccAACCCCGTTGTCGCCAAAGAAATAATTGCGATg < 1:10793717/35‑1 (MQ=255) ccAACCCCGTTGTCGCCAAAGAAATAATTGCGATg > 1:16643446/1‑35 (MQ=255) ccAACCCCGTTGTCGCCAAAGAAATAATTGCGATg > 1:13944633/1‑35 (MQ=255) ccAACCCAGTTGTCGCCAAAGAAATAATTGCGATg < 1:14137553/35‑1 (MQ=255) cAATCCCGTTGTCGCCAAAGAAATAATTGCGATgg < 1:18952434/35‑1 (MQ=255) cAACCCCGTTGTCGCCAAAGAAATAATTGCGATgg > 1:5085804/1‑35 (MQ=255) aaCCCCGTTGTCGCCAAAGAAATAATTGCGATGGa < 1:10783098/35‑1 (MQ=255) aaCCCCGGTGTCGCCAAAGAAATAATTGCGATGGa < 1:8229188/35‑1 (MQ=255) aCCCCGTTGTCGCCAAAGAAATAATTGCGATTGAt > 1:2984921/1‑35 (MQ=255) aCCCCGTTGTCGCCAAAGAAATAATTGCGATGGAt > 1:3142630/1‑35 (MQ=255) aCCCCGTTGTCGCCAAAGAAATAATTGCGATGGAt > 1:20492159/1‑35 (MQ=255) aCCCCGTTGTCGCCAAAGAAATAATTGCGATGGAt < 1:18806405/35‑1 (MQ=255) ccccGTTGTCGCCAAAGAAATAATTGCGATGGAtt < 1:2995613/35‑1 (MQ=255) cccGTTGTCGCCAAAGAAATAATTGCGATGGAttt < 1:11580674/35‑1 (MQ=255) cccGTTGTCGCCAAAGAAATAATTGCGATGGAttt > 1:453598/1‑35 (MQ=255) cccGTTGTCGCCAAAGAAATAATTGCGATGGAttt < 1:17832369/35‑1 (MQ=255) ccGTTGTCGCCAAAGAAATAATTGCGATGGAtttt > 1:15998667/1‑35 (MQ=255) cGTTGTCGCCAAAGAAATAATTGCGATGGATTTTg > 1:10240426/1‑35 (MQ=255) gTTGTCGCCAAAGAAATAATTGCGATGGATTTTGa > 1:4286917/1‑35 (MQ=255) gTTGTCGCCAAAGAAATAATTGCGATGGATTTTGa > 1:14326968/1‑35 (MQ=255) gTTGTCGCCAAAGAAATAATTGCGATGGATTTTGa < 1:14912638/35‑1 (MQ=255) gTTGTCGCCAAAGAAATAATTGCGATGGATTTTGa > 1:663963/1‑35 (MQ=255) gTTGTCGCCAAAGAAATAATTGCGATGGATTTTGa > 1:8504391/1‑35 (MQ=255) ttGTCGCCAAAGAAATAATTGCTATGGATTTTGAt > 1:7838454/1‑35 (MQ=255) ttGTCGCCAAAGAAATAATTGCGATGGATTTTGAt > 1:13019761/1‑35 (MQ=255) tGTCGCCAAAGAAATAATTGCGATGGATTTTGATa > 1:16526168/1‑35 (MQ=255) gTCGCCAAAGAAATAATTGCGATGGATTTTGATAc < 1:19606072/35‑1 (MQ=255) tCGCCAAAGAAATAATTGCGATGGATTTTGATACg < 1:10988948/35‑1 (MQ=255) cGCCAAAGAAATAATTGCGATGGATTTTGATACgg < 1:57689/35‑1 (MQ=255) cGCCAAAGAAATAATTGCGATGGATTTTGATACgg > 1:8856997/1‑35 (MQ=255) cGCCAAAGAAATAATTGCGATGGATTTTGATACgg < 1:18774064/35‑1 (MQ=255) gCCAAAGAAATAATTGCGATGGATTTTGATACggg < 1:5180503/35‑1 (MQ=255) gCCAAAGAAATAATTGCGATGGATTTTGATACggg < 1:7152708/35‑1 (MQ=255) gCCAAAGAAATAATTGCGATGGATTTTGATACggg > 1:19090756/1‑35 (MQ=255) gCCAAAGAAATAATTGCGATGGATTTTGATACggg < 1:13350942/35‑1 (MQ=255) ccAAAGAAATAATTGCGATGGATTTTGATACGGga > 1:17142044/1‑35 (MQ=255) ccAAAGAAATAATTGCGATGGATTTTGATACGGga < 1:4879302/35‑1 (MQ=255) ccAAAGAAATAATTGCGATGGATTTTGATACGGga > 1:19140270/1‑35 (MQ=255) ccAAAGAAATAATTGCGATGGATTTTGATACGGga < 1:13279173/35‑1 (MQ=255) cAAAGATATAATTTCGATGTATTTTGATACGGgag > 1:780098/1‑35 (MQ=25) cAAAGAAATAATTGCGATGGATTTTGATACGGgag > 1:10075006/1‑35 (MQ=255) AAAGAAATAATTGCGATGGATTTTGATACGGgaga > 1:8204953‑M1/1‑35 (MQ=255) AAAGAAATAATTGCGATGGATTTTGATACGGgaga > 1:14093766‑M1/1‑35 (MQ=255) AAAGAAATAATTGCGATGGATTTTGATACGGgaga < 1:15822261‑M1/35‑1 (MQ=255) AAAGAAATAATTGCGATGGATTTTGATACGGgaga < 1:18558130‑M1/35‑1 (MQ=255) AAAGAAATAATTGCGATGGATTTTGATACGGgaga < 1:3055596‑M1/35‑1 (MQ=255) | ACAGGCCGCCGCCAGAGCCAACCCCGTTGTCGCCAAAGAAATAATTGCGATGGATTTTGATACGGGAGA > REL606/1731408‑1731476 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |