New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1036071 | 104 (1.010) | 18 (0.180) | 6/46 | NT | 17.6% | intergenic (+43/+33) | ycbG/ompA | hypothetical protein/outer membrane protein A (3a;II*;G;d) |
? | REL606 | = 2316746 | 69 (0.700) | coding (216/891 nt) | yfbH | hypothetical protein |
AGGCAAAAAAAACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1036056‑1036071 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCCAGCCATAAAGCGATGCCGCGTTTGAGCGCAGC < REL606/2316746‑2316713 ccGCAAAAAAAACCCCCCAGCCATAAAGCGATGCC < 1:10323102/33‑1 cCAAAAAAAACCCCCCAGCCATAAAGCGATGCCGC < 1:4701778/34‑1 aCAAAAAAAACCCCCCAGCCATAAAGCGATGCCGC < 1:10539573/34‑1 GCAAAAAAAACCCCCCAGCCATAAAGCGATGCCGC < 1:5987452/35‑1 cAAAAAAATCCCCCAGCCATAAAGCGATGCCGCGT < 1:4286332/34‑1 cAAAAAAACCCCCCAGCCATAAAGCGATGCCGCGT < 1:12711325/34‑1 cAAAAAAACCCCCCAGCCATAAAGCGATGCCGCGT < 1:9622703/34‑1 AAAAAAAACCCCCCAGCCATAAAGCGATGCCGCGT < 1:5212776/35‑1 agAAAAACCCCCCAGCCATAAAGCGATGCCGCGTT < 1:3556755/33‑1 AAAAAATCCCCCAGCCATAAAGCGATGCCGCGTTT < 1:13744137/35‑1 AAAAAATCCCCCAGCCATAAAGCGATGCCGCGTTT < 1:5927032/35‑1 AAAAAACCCCCCAGCCATAAAGCGATGCCGCGTTT < 1:13124348/35‑1 AAAAAACCCCCCAGCCATAAAGCGATGCCGCGTTT < 1:3426826/35‑1 AAAAACCCCCCAGCCATAAAGCGATGCCGCGTTTG < 1:7713578/35‑1 AAAATCCCCCAGCCATAAAGCGATGCCGCGTTTGA < 1:9444665/35‑1 AAAATCCCCCAGCCATAAAGCGATGCCGCGTTTGA < 1:7001795/35‑1 AAAACCCCCCAGCCATAAAGCGATGCCGCGTTTGA < 1:3697308/35‑1 AAATCCCCCAGCCATAAAGCGATGCCGCGTTTGAG < 1:5144373/35‑1 actCCCCCAGCCATAAAGCGATGCCGCGTTTGAGC < 1:18782504/32‑1 acCCCCCCAGCCATAAAGCGATGCCGCGTTTGAGC < 1:7579882/33‑1 aatCCCCCAGCCATAAAGCGATGCCGCGTTTGAGC < 1:4047775/32‑1 aatCCCCCAGCCATAAAGCGATGCCGCGTTTGAGC < 1:10745308/32‑1 AACCCCCCAGCCATAAAGCGATGCCGCGTTTGAGC < 1:18130731/35‑1 AACCCCCCAGCCATAAAGCGATGCCGCGTTTGAGC < 1:13856132/35‑1 nCCCCCNAGCCATAAAGCGATGCCGCGTTTGAGCG < 1:342741/34‑1 ACCCCCCAGCCATAAAGCGATGCCGCGTTTGAGCG < 1:2024986/35‑1 ACCCCCCAGCCATAAAGCGATGCCGCGTTTGAGCG < 1:14502340/35‑1 CCCCCCAGCCATAAAGCGATGCCGCGTTTGAGCGC < 1:16532210/35‑1 CCCCCCAGCCATAAAGCGATGCCGCGTTTGAGCGC < 1:3436941/35‑1 aCCCCAGCCATAAAGCGATGCCGCGTTTGAGCGCA < 1:1254121/34‑1 CCCCCAGCCATAAAGCGATGCCGGGTTTGAGCGCA < 1:19546198/35‑1 CCCCCAGCCATAAAGCGATGCCGCGTTTGAGCGCA < 1:9742113/35‑1 CCCCCAGCCATAAAGCGATGCCGCGTTTGAGCGCA < 1:4147445/35‑1 CCCCCAGCCATAAAGCGATGCCGCGTTTGAGCGCA < 1:16483554/35‑1 CCCCCAGCCATAAAGCGATGCCGCGTTTGAGCGCA < 1:13104275/35‑1 CCCCCAGCCATAAAGCGATGACGCGTTTGAGCGCA < 1:18384630/35‑1 CCCCAGCCATAAAGCGATGCCGCGTTTGAGCGCAG < 1:12959373/35‑1 CCCCAGCCATAAAGCGATGCCGCGTTTGAGCGCAG < 1:1092614/35‑1 CCCAGCCATAAAGCGATGCCGCGTTTGAGCGCAGC < 1:20407724/35‑1 CCCAGCCATAAAGCGATGCCGCGTTTGAGCGCAGC < 1:1445528/35‑1 CCCAGCCATAAAGCGATGCCGCGTTTGAGCGCAGC < 1:13701810/35‑1 CCCAGCCATAAAGCGATGCCGCGTTTGAGCGCAGC < 1:9172959/35‑1 CCCAGCCATAAAGCGATGCCGCGTTTGAGCGCAGC < 1:9244338/35‑1 AGGCAAAAAAAACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1036056‑1036071 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCCAGCCATAAAGCGATGCCGCGTTTGAGCGCAGC < REL606/2316746‑2316713 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |