New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1922884 = | 47 (0.460) | 13 (0.150) | 5/40 | NT | 20.9% | intergenic (+109/+232) | znuB/ruvB | high‑affinity zinc transporter membrane component/Holliday junction DNA helicase B |
? | REL606 | = 3625456 | 59 (0.690) | pseudogene (7/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
CTGATAAGACGCGAACAGCGTCGCATCAGGCACACTGCCAATGTCGGATGCGGTGCGAGCGCCTTATCT > REL606/1922850‑1922918 | cTGATAAGACGCGAACAGCGTCGCATCAGGCacac > 1:17752867/1‑35 (MQ=255) cTGATAAGACGCGAACAGCGTCGCATCAGGCacac > 1:13396621/1‑35 (MQ=255) cTGATAAGACGCGAACAGCGTCGCATCAGGCacac < 1:12603517/35‑1 (MQ=255) cTGATAAGACGCGAACAGCGTCGCATCAGGCacac < 1:13189095/35‑1 (MQ=255) tGATAAGACGCGAACAGCGTCGCATCAGGCACACt < 1:18071432/35‑1 (MQ=40) tGATAAGACGCGAACAGCGTCGCATCAGGCACACt < 1:2206123/35‑1 (MQ=40) tGATAAGACGCGAACAGCGTCGCATCAGGCACACt < 1:16537458/35‑1 (MQ=40) gATAAGACGCGAACAGCGTCGCATCAGGCACACTg > 1:10822164/1‑35 (MQ=38) gATAAGACGCGAACAGCGTCGCATCAGGCACACTg > 1:6699681/1‑35 (MQ=38) gATAAGACGCGAACAGCGTCGCATCAGGCACACTg > 1:12854999/1‑35 (MQ=38) aTAAGACGCGAACAGCGTCGCATCAGGCACACTGc < 1:9371625/35‑1 (MQ=38) aTAAGACGCGAACAGCGTCGCATCAGGCACACTGc > 1:4728628/1‑35 (MQ=38) tAAGACGCGAACAGCGTCGCATCATGCACACTGcc > 1:3724948/1‑35 (MQ=255) tAAGACGCGAACAGCGTCGCATCAGGCACACTGcc > 1:6793914/1‑35 (MQ=38) tAAGACGCGAACAGCGTCGCATCAGGCACACTGcc > 1:2435152/1‑35 (MQ=38) tAAGACGCGAACAGCGTCGCATCAGGCACACTGcc > 1:8963779/1‑35 (MQ=38) tAAGACGCGAACAGCGTCGCATCAGGCACACTGcc > 1:10049016/1‑35 (MQ=38) aaGACGCGAACAGCGTCGCATCAGGCACACTGCCa > 1:15205939/1‑35 (MQ=38) aaGACGCGAACAGCGTCGCATCAGGCACACTGCCa > 1:7218066/1‑35 (MQ=38) aGACGCGAACAGCGTCGCATCAGGCACACTGCCaa > 1:6418679/1‑35 (MQ=38) gACGCGAACAGCGTCGCATCAGGCACACTGCCAAt > 1:20343656/1‑35 (MQ=38) gACGCGAACAGCGTCGCATCAGGCACACTGCCAAt > 1:9019772/1‑35 (MQ=38) gACGCGAACAGCGTCGCATCAGGCACACTGCCAAt > 1:12549939/1‑35 (MQ=38) aCGCGAACAGCGTCGCATCAGGCACACTGCCAATg > 1:18657437/1‑35 (MQ=40) aCGCGAACAGCGTCGCATCAGGCACACTGCCAATg > 1:9308482/1‑35 (MQ=40) aCGCGAACAGCGTCGCATCAGGCACACTGCCAATg > 1:4764416/1‑35 (MQ=40) cgcgAACAGCGTCGCATCAGGCACACTGCCCATGt > 1:473837/1‑35 (MQ=255) cgcgAACAGCGTCGCATCAGGCACACTGCCAATgg > 1:3587483/1‑34 (MQ=255) cgcgAACAGCGTCGCATCAGGCACACTGCCAATGt > 1:17192552/1‑35 (MQ=255) cgcgAACAGCGTCGCATCAGGCACACTGCCAATGt > 1:12421727/1‑35 (MQ=255) cgcgAACAGCGTCGCATCAGGCACACTGCCAATGt > 1:13094577/1‑35 (MQ=255) cgcgAACAGCGTCGCATCAGGCACACTGCCAATGt > 1:6554894/1‑35 (MQ=255) gcgAACAGCGTCGCATCAGGCACACTGCCAATGTc > 1:3877334/1‑35 (MQ=255) gcgAACAGCGTCGCATCAGGCACACTGCCAATGTc > 1:17861030/1‑35 (MQ=255) cgAACAGCGTCGCATCAGGCACACTGCCAATGTCg > 1:13417079/1‑35 (MQ=255) aaCAGCGTCGCATCAGGCACACTGCCAATGTCggg > 1:7289825/1‑34 (MQ=255) aaCAGCGTCGCATCAGGCACACTGCCAATGTCGGa > 1:15217992/1‑35 (MQ=255) aaCAGCGTCGCATCAGGCACACTGCCAATGTCGGa > 1:17464187/1‑35 (MQ=255) aaCAGCGTCGCATCAGGCACACTGCCAATGTCGGa > 1:10225247/1‑35 (MQ=255) aCAGCGTCGCATCAGGCACACTGCCAATGTCgggt > 1:870295/1‑33 (MQ=255) aCAGCGTCGCATCAGGCACACTGCCAATGTCgggt > 1:13897444/1‑33 (MQ=255) cAGCGTCGCATCATGCACACTGCCAATGTCGGagg > 1:200988/1‑33 (MQ=14) cAGCGTCGCATCAGGCACACTGCCAATGTCGGATg > 1:2161872/1‑35 (MQ=40) cAGCGTCGCATCAGGCACACTGCCAATGTCGGATg > 1:18972573/1‑35 (MQ=40) aGCGTCGCATCAGGCACACTGCCAATGTCGGGTgg > 1:11320208/1‑34 (MQ=255) aGCGTCGCATCAGGCACACTGCCAATGTCGGATGc > 1:12713790/1‑35 (MQ=38) aGCGTCGCATCAGGCACACTGCCAATGTCGGATGc > 1:12317/1‑35 (MQ=38) cGTCGCATCAGGCACACTGCCAATGTCGGATGCgg > 1:17344115/1‑35 (MQ=38) gTCGCATCATGCACACTGCCAATGTCGGATGGggg > 1:4107960/1‑34 (MQ=14) gTCGCATCAGGCACACTGCCAATGTCGGGTGGggg > 1:788642/1‑34 (MQ=14) gTCGCATCAGGCACACTGCCAATGTCGGATGGggg > 1:12583123/1‑34 (MQ=255) gTCGCATCAGGCACACTGCCAATGTCGGATGCggg > 1:7765852/1‑34 (MQ=38) gTCGCATCAGGCACACTGCCAATGTCGGATGCggg > 1:1654824/1‑34 (MQ=38) cccccccgccccccCTGCCAATGTCGGATGCGGTg > 1:15082620‑M1/15‑35 (MQ=255) cGCATCAGGCACACTGCCAATGTCGGGTGCGGTGc > 1:19477659/1‑35 (MQ=255) cGCATCAGGCACACTGCCAATGTCGGATGGCGTGc > 1:17489228/1‑35 (MQ=14) cGCATCAGGCACACTGCCAATGTCGGATGCGGGGc > 1:6103376/1‑35 (MQ=255) cGCATCAGGCACACTACCAATGTCGGGTGCggggg > 1:7835308/1‑32 (MQ=14) gCATCAGGCACACTGCCAATGTCGGATGGGGGGCg > 1:17643239/1‑35 (MQ=14) gCATCAGGCACACTGCCAATGTCGGATGCGGGGCg > 1:13227297/1‑35 (MQ=255) cccccaccccccCTGCCAATGTCGGATGCGGTGCg > 1:9233500‑M1/13‑35 (MQ=255) ccccgccccccCTGCCAATTTCGGATGCGGTGCGa > 1:9425154‑M1/12‑35 (MQ=255) cccccccccccCTGCCAATGTCGGATGCGGTGCGa > 1:9065337‑M1/12‑35 (MQ=255) cATCAGGCACACTGCCAATGTCGGATGGGGGGCgg > 1:14854686/1‑34 (MQ=14) cccgccccccCTGCCAATGTCGGATGCGGTGCGAg > 1:17216264‑M1/11‑35 (MQ=255) aTCAGGTACACTGCCAATGTCGGATGCGGTGCggg > 1:7283089/1‑33 (MQ=11) ccgccccccCTGCCAATTTCGGATGCGGTGCGAgc > 1:18603571‑M1/10‑35 (MQ=255) ccgccccccCTGCCAATGTCGGATGCGGTGCGAgc > 1:4660374‑M1/10‑35 (MQ=255) ccgccccccCTGCCAATGTCGGATGCGGTGCGAgc > 1:4661286‑M1/10‑35 (MQ=255) cccccccccCTGCCAATGTCGGATGCGGTGCGAgc > 1:14016257‑M1/10‑35 (MQ=255) cgccccccCTGCCAATGTCGGATGCGGTGCGAgcg > 1:8504143‑M1/9‑35 (MQ=255) cgccccccCTGCCAATGTCGGATGAGGTGCGAgcg > 1:7155740‑M1/9‑35 (MQ=255) ccccccccCTGCCAATGTCGGATGCGGTGCGAgcg > 1:5798921‑M1/9‑35 (MQ=255) cAGGCACACTGCCAATGTCGGATGGGGGGGGAgcg > 1:15231770/1‑35 (MQ=14) aaccccccCTGCCAATGTCGGATGCGGTGCGAgcg > 1:19197238‑M1/9‑35 (MQ=255) aGGCACACTGCCAATGTCGGATTCGGTGCGAgcgc > 1:11850280/1‑35 (MQ=255) aGGCACACTGCCAATGTCGGATGCGGGGCGAgcgc > 1:17212583/1‑35 (MQ=255) cccccCTGCCAATGTCGGATGCGGTGCGAGCGCCt > 1:5353572‑M1/6‑35 (MQ=255) ccccCTGCCAATGTCGGATGCGGTGCGAGCGCCtt > 1:14884796‑M1/5‑35 (MQ=255) ccccCTGCCAATGTCGGATGCGGTGCGAGCGCCtt > 1:19553644‑M1/5‑35 (MQ=255) ccccCTGCCAATGTCGGATGCGGTGCGAGCGCCtt > 1:20078317‑M1/5‑35 (MQ=255) cacaCTCCCAATGTCGGATGCGGGGCGAGCGccct > 1:15661438/1‑33 (MQ=14) cccCTGCCAATGTCGGATGCGGTGCGAGCGCCTTa > 1:11311602‑M1/4‑35 (MQ=255) cccCTGCCAATGTCGGATGCGGTGCGAGCGCCTTa > 1:18304673‑M1/4‑35 (MQ=255) ccCTGCCAATGTCGGATGCGGTGCGAGCGCCTTAt > 1:5950794‑M1/3‑35 (MQ=255) ccCTGCCAATGTCGGATGCGGTGCGAGCGCCTTAt > 1:7474017‑M1/3‑35 (MQ=255) cCTGCCAATGTCGGATGCGGTGCGAGCGCCTTATc > 1:9149969‑M1/2‑35 (MQ=255) cCTGCCAATGTCGGATGCGGTGCGAGCGCCTTATc > 1:3902908‑M1/2‑35 (MQ=255) cCTGCCAATGTCGGATGCGGTGCGAGCGCCTTATc > 1:14173342‑M1/2‑35 (MQ=255) CTGCCAATGTCGGATGCGGTGCGAGCGCCTTATCt > 1:17240123‑M1/1‑35 (MQ=255) CTGCCAATGTCGGATGCGGTGCGAGCGCCTTATCt > 1:18456838‑M1/1‑35 (MQ=255) | CTGATAAGACGCGAACAGCGTCGCATCAGGCACACTGCCAATGTCGGATGCGGTGCGAGCGCCTTATCT > REL606/1922850‑1922918 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |