New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2713428 = | 47 (0.520) | 102 (1.130) | 38/42 | NT | 68.5% | noncoding (77/93 nt) | serV | tRNA‑Ser |
? | REL606 | = 2774196 | NA (NA) | noncoding (1343/1343 nt) | IS186 | repeat region |
Only 100 of 298 total aligned reads displayed.
GTATGCGGTCAAAAGCTGCATCCGGGGTTCGAATccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2713461‑2713428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG < REL606/2774196‑2774160 GTATGCGGTCAAAAGCTGCATCCGGGGTTCGAATC < 1:19062013/35‑1 GTATGCGGTCAAAAGCTGCATCCGGGGTTCGAATC > 1:15511318/1‑35 GTATGCGGTCAAAAGCTGCATCCGGGGTTCGAATC > 1:6020900/1‑35 GTATGCGGTCAAAAGCTGCATCCGGGGTTCGAATC < 1:20479415/35‑1 TATGCTGTCAAAAGCTGCATCCGGGGTTCGAATCC > 1:13217832/1‑35 TATGCTGTCAAAAGCTGCATCCGGGGTTCGAATCC > 1:18022217/1‑35 TATGCGGTCAAAATCTGCATCCGGGGTTCGAATCC > 1:4024129/1‑35 TATGCGGTCAAAAGCTGCATCCGGGGTTCGAATCC < 1:11198455/35‑1 ATGCGGTCAAAAGCTGCATCCGGGGTTCGAATCCC > 1:10534370/1‑35 ATGCGGTCAAAAGCTGCATCCGGGGTTCGAATCCC < 1:15774423/35‑1 ATGCGGTCAAAAGCTGCATCCGGGGTTCGAATCCC > 1:10212938/1‑35 TGCGGTCAAAAGCTGCATCCGGGGTTCGAATCacc < 1:10610167/35‑4 GCGGTCAAAAGCTGCATCCGGGGTTCGAATCCCAT < 1:18276050/35‑1 CGGTCAAAAGCTGCATCCGGGGTTCGAATCCCATA > 1:1512378/1‑35 TCAAAAGCTGCATCCGGGGTTCGAATCCCATAAGC > 1:15313895/1‑35 CAAAAGCTGCATCCGGGGTTCGAATCCCATAAGCN > 1:16983681/1‑35 CAAAAGCTGCATCCGGGGTTCGAATCCCATAAGCG > 1:44734/1‑35 AAAGCTGCATCCGGGGTTCGAATCCCATAAGCGCT > 1:20289940/1‑35 AAAGCTGCATCCGGGGTTCGAATCCCATAAGCGCT > 1:717657/1‑35 AAGCTGCATCCGGGGTTCGAATCCCATAAGCGCTA > 1:18863503/1‑35 AAGCTGCATCCGGGGTTCGAATCCCATAAGCGCTA < 1:20166169/35‑1 AAGCTGCATCCGGGGTTCGAATCCCATAAGCGCTA > 1:5848019/1‑35 AGCTGCATCCGGGGTTCGAATCCCATAAGCGCTAA < 1:17637617/35‑1 AGCTGCATCCGGGGTTCGAATCCCATAAGCGCTAA > 1:13026194/1‑35 AGCTGCATCCGGGGTTCGAATCCCATAAGCGCTAA > 1:1357112/1‑35 AGCTGCATCCGGGGTTCGAATCCCATAAGCGCTAA > 1:4236479/1‑35 GCTGCATCCGGGGTTCGAATCCCATAAGCGCTAAC > 1:2125157/1‑35 GCTGCATCCGGGGTTCGAATCCCATAAGCGCTAAC < 1:19325740/35‑1 CTGCATCCGGTGTTCGAATCCCATAAGCGCTAACT > 1:3205563/1‑35 CTGCATCCGGGGTTCGAATCCCATAAGCGCTAACT < 1:18713762/35‑1 GCATCCGGGGTTCGAATCCCATAAGCGCTAACTTA > 1:16600550/1‑35 CATCCGGGGTTCTAATCCCATAAGCGCTAACTTAA > 1:20203768/1‑35 CATCCGGGGTTCGAATCCCATAAGCGCTAACTTAA > 1:100979/1‑35 ATCCGGGGTTCGAATCCCATAAGCGCTAACTTAAG < 1:1838346/35‑1 TCCGGGGTTCGAATCCCATAAGCGCTAACTTAAGG < 1:5360156/35‑1 TCCGGGGTTCGAATCCCATAAGCGCTAACTTAAGG < 1:1623380/35‑1 CCGGGGTTCGAATCCCATAAGCGCTAACTTAAGGG > 1:19632007/1‑35 CCGGGGTTCGAATCCCATAAGCGCTAACTTAAGGG < 1:18135455/35‑1 CGGGGTTCGAATCCCATAAGCGCTAACTTAAGGGT > 1:2966342/1‑35 CGGGGTTCGAATCCCATAAGCGCTAACTTAAGGGT > 1:9463093/1‑35 GGGTTCGAATCCCATAAGCGCTAACTTAAGGGTTG < 1:12880474/35‑1 GGGTTCGAATCCCATAAGCGCTAACTTAAGGGTTG < 1:14851800/35‑1 GGTTCGAATCCCATAAGCGCTAACTTAAGGGTTGA < 1:20048545/35‑1 GGTTCGAATCCCATAAGCGCTAACTTAAGGGTTGA > 1:2147066/1‑35 GGTTCGAATCCCATAAGCGCTAACTTAAGGGTTGA < 1:348381/35‑1 GTTCGAATCCCATAAGCGCTAACTTAAGGGTTGAA > 1:13116076/1‑35 TCGAATCCCATAAGCGCTAACTTAAGGGTTGAACC > 1:2330267/1‑35 TCGAATCCCATAAGCGCTAACTTAAGGGTTGAACC > 1:2508278/1‑35 TCGAATCCCATAAGCGCTAACTTAAGGGTTGAACC < 1:2893968/35‑1 ttATCCCATAAGCGCTAACTTAAGGGTTGAACCAT < 1:10462480/33‑1 ttATCCCATAAGCGCTAACTTAAGGGTTGAACCAT > 1:14612230/3‑35 tATCCCATAAGCGCTAACTTAAGGGTTGAACCATC < 1:10882781/34‑1 cggCCCATAAGCGCTAACTTAAGGGTTGAACCATC > 1:3759227/4‑35 agTCCCATAAGCGCTAACTTAAGGGTTGAACCATC < 1:8413688/33‑1 AATCCCATAAGCGCTAACTTAAGGGTTGAACCATC < 1:8741455/35‑1 ggCCCATAAGCGCTAACTTAAGGGTTGAACCATCT > 1:968881/3‑35 agCCCATAAGCGCTAACTTAAGGGTTGAACCATCT < 1:9252009/33‑1 ATCCCATAAGCGCTAACTTAAGGGTTGAACCATCT > 1:1229606/1‑35 ATCCCATAAGCGCTAACTTAAGGGTTGAACCATCT > 1:17170113/1‑35 ATCCCATAAGCGCTAACTTAAGGGTTGAACCATCT > 1:2804221/1‑35 ATCCCATAAGCGCTAACTTAAGGGTTGAACCATCT > 1:12636141/1‑35 ATCCCATAAGCGCTAACTTAAGGGTTGAACCATCT < 1:14145445/35‑1 tatCATAAGCGCTAACTTAAGGGTTGAACCATCTG < 1:4634961/32‑1 gCCCATAAGCGCTAACTTAAGGGTTGAACCATCTG < 1:16790697/34‑1 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTG < 1:7679232/35‑1 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTG < 1:6322724/35‑1 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTG > 1:4770833/1‑35 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTG < 1:4296014/35‑1 CCCATAATCGCTAACTTAAGGGTTGAACCATCTGA < 1:10804108/35‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA > 1:10060799/1‑35 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA > 1:7584676/1‑35 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA < 1:11669319/35‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA < 1:7111731/35‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA > 1:6540972/1‑35 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA < 1:17587478/35‑1 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA > 1:11885477/1‑35 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA > 1:580876/1‑35 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA > 1:5625633/1‑35 CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGA > 1:9131285/1‑35 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAA > 1:8636375/1‑35 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAA < 1:8279089/35‑1 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAA > 1:17072225/1‑35 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAA > 1:16018910/1‑35 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAA > 1:15610755/1‑35 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAA > 1:6677766/1‑35 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAA < 1:8878210/35‑1 CCATAAGCGCTAACTTAAGGGTTGAACCATCTAAA < 1:11033630/35‑1 CATAATCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:13980569/1‑35 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG < 1:11510538/35‑1 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:8029297/1‑35 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:6786401/1‑35 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:11983786/1‑35 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG < 1:5748136/35‑1 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:5179499/1‑35 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG < 1:13479238/35‑1 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:14380743/1‑35 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG < 1:14795915/35‑1 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG > 1:1647974/1‑35 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG < 1:17364302/35‑1 CATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG < 1:18551090/35‑1 GTATGCGGTCAAAAGCTGCATCCGGGGTTCGAATccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2713461‑2713428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG < REL606/2774196‑2774160 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |