New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1493949 = | 71 (0.690) | 13 (0.160) | 5/38 | NT | 17.3% | coding (533/1062 nt) | yncE | hypothetical protein |
? | REL606 | = 1619524 | 68 (0.840) | intergenic (‑133/+84) | rem/hokD | predicted protein/small toxic polypeptide |
Only 100 of 170 total aligned reads displayed.
TGGGTCGTTGATGGCGAGAATATCAAACTGAAAACCGCCATCCAGAACACCGGTAAAATGAGTACCGGT > REL606/1493915‑1493983 | tGGGTCGTTGATGGCGAGAATATCAAACTGAAAAc > 1:20268847/1‑35 (MQ=255) tGGGTCGTTGATGGCGAGAATATCAAACTGAAAAc < 1:7693863/35‑1 (MQ=255) tGGGTCGTTGATGGCGAGAATATCAAACTGAAAAc > 1:20434090/1‑35 (MQ=255) tGGGTCGTTGATGGCGAGAATATCAAACTGAAAAc < 1:15864629/35‑1 (MQ=255) tGGGTCGTTGATGGCGAGAATATCAAACTGAAAAc < 1:6881855/35‑1 (MQ=255) tGGGTCGTTGATGGCGAGAATATCAAACTGAAAAc > 1:9758171/1‑35 (MQ=255) gaacttcaaacgcgttgaaaataaaaacaaaaacc < 1:295981‑M1/1‑1 (MQ=255) gggTCGTTGATGGCGAGAATATCAAACTGAAAAcc < 1:14631059/35‑1 (MQ=255) gggTCGTTGATGGCGAGAATATCAAACTGAAAAcc < 1:5093912/35‑1 (MQ=255) gggTCGTTGATGGCGAGAATATCAAACTGAAAAcc < 1:17630101/35‑1 (MQ=255) gggTCGTTGATGGCGAGAATATCAAACTGAAAAcc < 1:20208455/35‑1 (MQ=255) gggTCGTTGATGGCGAGAATATCAAACTGAAAAcc > 1:10993376/1‑35 (MQ=255) aacttcaaacgcgttgaaaataaaaacaaaaaccc > 1:15243980‑M1/34‑35 (MQ=255) ggTCGTTGATGGCGAGAATATCAAACTGAAAACCg > 1:18726606/1‑35 (MQ=255) ggTCGTTGATGGCGAGAATATCAAACTGAAAACCg > 1:6581907/1‑35 (MQ=255) ggTCGTTGATGGCGAGAATATCAAACTGAAAACCg < 1:3543136/35‑1 (MQ=255) acttcaaacgcgttgaaaataaaaacaaaaacCCg > 1:9412540‑M1/33‑35 (MQ=255) acttcaaacgcgttgaaaataaaaacaaaaacCCg < 1:3653118‑M1/3‑1 (MQ=255) acttcaaacgcgttgaaaataaaaacaaaaacCCg > 1:5885642‑M1/33‑35 (MQ=255) gTCGTTGATGGCGAGAATATCAAACTGAAAACCGc < 1:20542991/35‑1 (MQ=255) gTCGTTGATGGCGAGAATATCAAACTGAAAACCGc > 1:2668319/1‑35 (MQ=255) gTCGTTGATGGCGAGAATATCAAACTGAAAACCGc < 1:6438501/35‑1 (MQ=255) gTCGTTGATGGCGAGAATATCAAACTGAAAACCGc > 1:5340520/1‑35 (MQ=255) cttcaaacgcgttgaaaataaaaacaaanncCcgn < 1:16437002‑M1/4‑2 (MQ=255) cttcaaacgcgttgaaaataaaaacaaaaacCCGc < 1:6517045‑M1/4‑1 (MQ=255) ttcaaacgcgttgaaaataaaaacaaaaacCCGcc > 1:10061760‑M1/31‑35 (MQ=255) ttcaaacgcgttgaaaataaaaacaaaaacCCGcc < 1:6192710‑M1/5‑1 (MQ=255) tCGTTGATGTCGAGAATATCAAACTGAAAACCGcc > 1:12528441/1‑35 (MQ=255) tCGTTGATGGCGAGAATATCAAACTGAAAACCGcc > 1:8561028/1‑35 (MQ=255) cGTTGATGGCGAGAATATCAAACTGAAAACCGcaa < 1:4215084/35‑3 (MQ=255) gTTGATGGCGAGAATATCAAACTGAAAACCGCTAt > 1:7125384/1‑35 (MQ=255) gTTGATGGCGAGAATATCAAACTGAAAACCGCCAt > 1:7388947/1‑35 (MQ=255) gTTGATGGCGAGAATATCAAACTGAAAACCGCCAt > 1:17896197/1‑35 (MQ=255) tGATGGCGAGAATATCAAACTGAAAACCGCCATcc > 1:15741382/1‑35 (MQ=255) tGATGGCGAGAATATCAAACTGAAAACCGCCATcc > 1:10464245/1‑35 (MQ=255) tGATGGCGAGAATATCAAACTGAAAACCGCCATcc > 1:4538362/1‑35 (MQ=255) tGATGGCGAGAATATCAAACTGAAAACCGCCATcc > 1:4953541/1‑35 (MQ=255) gATGGCGAGAATATCAAACTGAAAACCGCCATCCa > 1:5012372/1‑35 (MQ=255) aTGGCGAGAATATCAAACTGAAAACCGCCATCCAg > 1:16707836/1‑35 (MQ=255) ggCGAGAATATCAAACTGAAAACCGCCATCCAGaa > 1:4768340/1‑35 (MQ=255) ggCGAGAATATCAAACTGAAAACCGCCATCCAGaa > 1:10855537/1‑35 (MQ=255) ggCGAGAATATCAAACTGAAAACCGCCATCCAGaa > 1:14145759/1‑35 (MQ=255) ggCGAGAATATCAAACTGAAAACCGCCATCCAGaa > 1:14311930/1‑35 (MQ=255) gCGAGAATATCAAACTGAAAACCGCCATCCAGAac > 1:11370824/1‑35 (MQ=255) cGAGAATATCAAACTGAAAACCGCCATCCAGAaca > 1:2100372/1‑35 (MQ=255) cGAGAATATCAAACTGAAAACCGCCATCCAGAaca > 1:4407973/1‑35 (MQ=255) cGAGAATATCAAACTGAAAACCGCCATCCAGAaca > 1:16073811/1‑35 (MQ=255) gagaATATCAAACTGAAAACCGCCATCCAGAacac > 1:19563518/1‑35 (MQ=255) agaATATCAAACTGAAAACCGCCATCCAGAACAcc > 1:2181973/1‑35 (MQ=255) agaATATCAAACTGAAAACCGCCATCCAGAACAcc > 1:5587699/1‑35 (MQ=255) gaATATCAAACTGAAAACCGCCATCCAGAACACCg > 1:10559906/1‑35 (MQ=255) aaTATCAAACTGAAAACCGCCATCCAGAACACCgg > 1:10238077/1‑35 (MQ=255) aaTATAAAACTAAAACCCGCCATCCAGAACACCgg < 1:17188403/35‑1 (MQ=21) atatCAAACTGAAAACCGCCATCCAGAACACCGGt > 1:3558711/1‑35 (MQ=255) atatCAAACTGAAAACCGCCATCCAGAACACCGGt > 1:8931280/1‑35 (MQ=255) atatCAAACTGAAAACCGCCATCCAGAACACCGGt > 1:936443/1‑35 (MQ=255) tatCAAACTGAAAACCGCCATCCAGAACACCGTTa > 1:1751487/1‑35 (MQ=255) tatCAAACTGAAAACCGCCATCCAGAACACCGGTa > 1:19236138/1‑35 (MQ=255) tatCAAACTGAAAACCGCCATCCAGAACACCGGTa > 1:17010981/1‑35 (MQ=255) tatAAAACTAAACCCCGCCATCCAGAACACCGGTa < 1:13307093/35‑1 (MQ=16) atCAAACTGAAAACCGCCATCCAGAACACCGGTaa > 1:132633/1‑35 (MQ=255) aacaaacaaaaacCCGCCATCCAGAACACCGGTaa > 1:7700613‑M1/14‑35 (MQ=255) aaaaaacaaaaacCCGCCATCCAGAACACCGGTaa > 1:13756006‑M1/14‑35 (MQ=255) tCAAACTGAAAACCGCCATCCAGTACACCGGTaaa > 1:19589281/1‑35 (MQ=255) tCAAACTGAAAACCGCCATCCAGAACACCGGTaaa > 1:4077522/1‑35 (MQ=255) cAAACTGAAAACCGCCATCCAGAACACCGGTaaaa > 1:12896320/1‑35 (MQ=255) cAAACTGAAAACCGCCATCCAGAACACCGGTaaaa > 1:18243718/1‑35 (MQ=255) cAAACTGAAAACCGCCATCCAGAACACCGGTaaaa > 1:18138211/1‑35 (MQ=255) naCTGAAAACCGCCATCCAGAACACCGGTAAAANg > 1:19418106/2‑35 (MQ=255) aaCTGAAAACCGCCATCCAGAACACCGGTAAAATg > 1:14249383/1‑35 (MQ=255) aaCTGAAAACCGCCATCCAGAACACCGGTAAAATg > 1:8134649/1‑35 (MQ=255) actaaaacCCGCCATCCAGAACACCGGTAAAATGa > 1:14411600‑M1/9‑35 (MQ=255) aCTTAAAACCTCCATCCAGAACACCGGTAAAATGa > 1:19943886/1‑35 (MQ=37) aCTGAAAACCGCCATCCAGAACACCTGTAAAATGa > 1:7208942/1‑35 (MQ=255) aCTGAAAACCGCCATCCAGAACACCGGTAAAATGa > 1:9042279/1‑35 (MQ=255) aCTGAAAACCGCCATCCAGAACACCGGTAAAATGa > 1:4017886/1‑35 (MQ=255) aCTGAAAACCGCCATCCAGAACACCGGTAAAATGa > 1:3076399/1‑35 (MQ=255) tGAAAACCGCCATCCAGAACACCGGTAAAATGAGt > 1:19355587/1‑35 (MQ=255) aaaaacCCGCCATCCAGAACACCGGTAAAATGAGt > 1:270466‑M1/7‑35 (MQ=255) gAAAACCGCCATCCAGAACACCGGTAAAATGAGTa > 1:16458809/1‑35 (MQ=255) gAAAACCGCCATCCAGAACACCGGTAAAATGAGTa > 1:12739053/1‑35 (MQ=255) gAAAACCGCCATCCAGAACACCGGTAAAATGAGTa > 1:12732050/1‑35 (MQ=255) aaaacCCGCCATCCAGCACACCGGTAAAATGAGTa > 1:9579456‑M1/6‑35 (MQ=255) aaccCCGCCATCCAGAACACCGGTAAAATGAGTAc > 1:17586912‑M1/5‑35 (MQ=255) aaaaCCGCCATCCAGAACACCGGTAAAATGAGTAc > 1:9686251/1‑35 (MQ=255) aaaaCCGCCATCCAGAACACCGGTAAAATGAGTAc > 1:19707412/1‑35 (MQ=255) aaaaCCGCCATCCAGAACACCGGTAAAATGAGTAc > 1:18655819/1‑35 (MQ=255) aaaCCGCCATCCAGAACACCGGTAAAATGAGTAcc > 1:17998976/1‑35 (MQ=255) aaaCCGCCATCCAGAACACCGGTAAAATGAGTAcc > 1:9608015/1‑35 (MQ=255) ccCCGCCATCCAGAACACCGGTAAAATGAGTACCg > 1:12091203‑M1/3‑35 (MQ=255) ccCCGCCATCCAGAACAACGGTAAAATGAGTACCg > 1:935245‑M1/3‑35 (MQ=255) aaCCGCCATCCAGAACACCGGTAAAATGAGTACCg > 1:13541951/1‑35 (MQ=255) aaCCGCCATCCAGAACACCGGTAAAATGAGTACCg > 1:9067064/1‑35 (MQ=255) cCCGCCATCCAGAACACCGGTAAAATGAGTACCgg > 1:12106453‑M1/2‑35 (MQ=255) aCCGCCATCCAGAACACTGGTAAAATGAGTACCgg > 1:17094013/1‑35 (MQ=255) aCCGCCATCCAGAACACCGGTAAAATGAGTACCgg > 1:346398/1‑35 (MQ=255) aCCGCCATCCAGAACACCGGTAAAATGAGTACCgg > 1:1810722/1‑35 (MQ=255) aCCGCCATCCAGAACACCGGTAAAATGAGTACCgg > 1:11163991/1‑35 (MQ=255) CCGCCATCCAGAACACCGGTAAAATGAGTACCGGt < 1:11751545‑M1/35‑1 (MQ=255) CCGCCATCCAGAACACCGGTAAAATGAGTACCGGt < 1:10034769‑M1/35‑1 (MQ=255) | TGGGTCGTTGATGGCGAGAATATCAAACTGAAAACCGCCATCCAGAACACCGGTAAAATGAGTACCGGT > REL606/1493915‑1493983 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |