New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1286707 = | 97 (0.940) | 17 (0.210) | 5/38 | NT | 21.4% | intergenic (+31/‑152) | narI/ECB_01206 | nitrate reductase 1, gamma (cytochrome b(NR)) subunit/hypothetical protein |
? | REL606 | = 4286236 | 48 (0.590) | coding (386/930 nt) | alsK | D‑allose kinase |
Only 100 of 118 total aligned reads displayed.
ACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAG > REL606/4286202‑4286270 | aCCGAGATAGGCCGCCAGAACCAGTTGTTGCGTaa < 1:12587452/35‑1 (MQ=255) aCCGAGATAGGCCGCCAGAACCAGTTGTTGCGTaa < 1:14299727/35‑1 (MQ=255) aCCGAGATAGGCCGCCAGAACCAGTTGTTGCGTaa < 1:16445575/35‑1 (MQ=255) aCCGAGATAGGCCGCCAGAACCAGTTGTTGCGTaa > 1:19040780/1‑35 (MQ=255) aCCGAGATAGGCCGCCAGAACCAGTTGTTGCGTaa > 1:4172675/1‑35 (MQ=255) aCCGAGATAGGCCGCCAGAACCAGTTGTTGCGTaa < 1:4756933/35‑1 (MQ=255) ccGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAg < 1:10729167‑M2/35‑2 (MQ=255) ccGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAg < 1:16471122‑M2/35‑2 (MQ=255) ccGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAg < 1:9020873‑M2/35‑2 (MQ=255) cGAGATAGGCCGCCAGAACCAGTTGTTGGGTaatg > 1:20420639/1‑33 (MQ=38) cGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAgg < 1:10450596‑M2/35‑3 (MQ=255) cGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAgg < 1:7478268‑M2/35‑3 (MQ=255) cGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAgg > 1:19330625‑M2/1‑33 (MQ=255) cGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAgg > 1:18154855‑M2/1‑33 (MQ=255) cGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAgg < 1:16854641‑M2/35‑3 (MQ=255) cGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAgg > 1:15242602‑M2/1‑33 (MQ=255) cGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAgg < 1:6313201‑M2/35‑3 (MQ=255) gagaTAGGCCGCCAGAACCAGTTGTTGCGTAAggc < 1:8979058‑M2/35‑4 (MQ=255) gagaTAGGCCGCCAGAACCAGTTGTTGCGTAAggc < 1:9574813‑M2/35‑4 (MQ=255) ngaTAGGCCGCCAGAACCAGTTGTTGCGTAAggcg < 1:11767431‑M2/35‑5 (MQ=255) agaTAGGCCGCCAGAACCAGTTGTTGCGTAAggcg < 1:4089273‑M2/35‑5 (MQ=255) agaTAGGCCGCCAGAACCAGTTGTTGCGTAAggcg > 1:12399873‑M2/1‑31 (MQ=255) agaTAGGCCGCCAGAACCAGTTGTTGCGTAAggcg < 1:12805601‑M2/35‑5 (MQ=255) agaTAGGCCGCCAGAACCAGTTGTTGCGTAAggcg > 1:11217958‑M2/1‑31 (MQ=255) gaTAGGCCGCCAGAACCAGTTGTTGCGTAAggcgg < 1:16554‑M2/35‑6 (MQ=255) gaTAGGCCGCCAGAACCAGTTGTTGCGTAAggcgg < 1:15040646‑M2/35‑6 (MQ=255) gaTAGCCCGCCAGAACCAGTTGTTGCGTAAggcgg > 1:4185554‑M2/1‑30 (MQ=255) aTAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGt < 1:7687636/35‑1 (MQ=255) tAGGCCGCCAGAACCAGTTGTTGCGTAAggcgggg < 1:6799146‑M2/35‑8 (MQ=255) tAGGCCGCCAGAACCAGTTGTTGCGTAAggcgggg < 1:12547507‑M2/35‑8 (MQ=255) aGGCCGCCAGAACCAGTTGTTGCGTAAggcggggt < 1:10396277‑M2/35‑9 (MQ=255) aGGCCGCCAGAACCAGTTGTTGCGTAAggcggggt < 1:13515374‑M2/35‑9 (MQ=255) aGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGttt < 1:20214237/35‑1 (MQ=255) aGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGttt < 1:6593734/35‑1 (MQ=255) ggCCGCCAGAACCAGTTGTTGCGTAAggcggggtt < 1:6858154‑M2/35‑10 (MQ=255) ggCCGCCAGAACCAGTTGTTGCGTAAGGCGGtttt < 1:8398159/35‑1 (MQ=255) ggCCGCCAGAACCAGTTGTTGCGTAAGGCGGtttt < 1:13260365/35‑1 (MQ=255) gccgccAGAACCAGTTGTTGCGTAAggcggggtta < 1:16954289‑M2/35‑11 (MQ=255) gacgccAGAACCAGTTGTTGCGTAAGGCGGTTTTc < 1:2064644/33‑1 (MQ=255) ccgccAGAACCAGTTGTTGCGTAAggcggggtttt < 1:7900049‑M2/35‑12 (MQ=255) ccgccAGAACCAGTTGTTGCGTAAGGCGGTTTTct < 1:13527825/35‑1 (MQ=255) ccgccAGAACCAGTTGTTGCGTAAGGCGGTTTTct < 1:11880513/35‑1 (MQ=255) ccgccAGAACCAGTTGTTGCGTAAGGCGGTTTTct < 1:11130012/35‑1 (MQ=255) ccgccAGAACCAGTTGTTGCGCAAggcggggtttt < 1:18047797‑M2/35‑12 (MQ=255) cgccAGAACCAGTTGTTGCGTAAggcgggtttttt < 1:1097387‑M2/35‑13 (MQ=255) cgccAGAACCAGTTGTTGCGTAAggcggggttttt < 1:5177674‑M2/35‑13 (MQ=255) cgccAGAACCAGTTGTTGCGTAAGGCGGTTTTcta < 1:13278801/35‑1 (MQ=255) cgccAGAACCAGTTGTTGCGTAAGGCGGTTTTcta < 1:9400947/35‑1 (MQ=255) cgccAGAACCAGTTGTTGCGTAAGGCGGTTTTcta < 1:20368931/35‑1 (MQ=255) cgccAGAACCAGTTGTTGCGTAAGGAGGTTTTcta < 1:19143777/35‑1 (MQ=255) gccAGAACCAGTTGTTGCGTAAggcgggttttttc < 1:2862930‑M2/35‑14 (MQ=255) gccAGAACCAGTTGTTGCGTAAggcggggtttttt < 1:6588445‑M2/35‑14 (MQ=255) gccAGAACCAGTTGTTGCGTAAggcggggtttttc < 1:9139820‑M2/35‑14 (MQ=255) ccAGAACCAGTTGTTGCGTAAGGCGGTTTTctact < 1:14480201/35‑1 (MQ=255) ctgAACCAGTTGTTGCGTAAGGCGGTTTTctacta < 1:4298003/33‑1 (MQ=255) cAGAACCAGTTGTTGCGTAAggcggggtttttttt < 1:9088719‑M2/35‑16 (MQ=255) cAGAACCAGTTGTTGCGTAAggcggggtttttttc < 1:17758393‑M2/35‑16 (MQ=255) cAGAACCAGTTGTTGCGTAAggcggggttttttta < 1:2220813‑M2/35‑16 (MQ=255) cAGAACCAGTTGTTGCGTAAggcggggtttttctt < 1:10246583‑M2/35‑16 (MQ=255) cAGAACCAGTTGTTGCGTAAggcggggtttttctt < 1:13832342‑M2/35‑16 (MQ=255) cAGAACCAGTTGTTGCGTAAGGCGGTTTTctacta < 1:10514214/35‑1 (MQ=255) cAGAACCAGTTGTTGCGTAAGGCGGTTTTctacta < 1:1282249/35‑1 (MQ=255) cAGAACCAGTTGTTGCGTAAGGCGGTTTTctacta < 1:12490027/35‑1 (MQ=255) cAGAACCAGTTGTTGAGTAAGGCGGTTTTctacta < 1:834174/35‑1 (MQ=255) aGAACCAGTTGTTGCGTAAGGCGGTTTTCtactac < 1:18050202/35‑1 (MQ=255) aGAACCAGTTGTTGCGTAAGGCGGTTTTCtactac < 1:14616124/35‑1 (MQ=255) gAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACg < 1:14911696/35‑1 (MQ=255) aaCCAGTTGTTGCGTAAGGCGGTTTTCTACTACGt < 1:723873/35‑1 (MQ=255) aaCCAGTTGTTGCGTAAGGCGGTTTTCTACTACGt < 1:9196631/35‑1 (MQ=255) aaCCAGTTGTTGCGTAAGGCGGTTTTCTACTACGt < 1:14254626/35‑1 (MQ=255) ccAGTTGTTGCGTAAGGCGGTTTTCTACTACGTcc < 1:3726816/35‑1 (MQ=255) ccAGTTGTTGCGTAAGGCGGTTTTCTACTACGTcc < 1:10504801/35‑1 (MQ=255) ccAGTTGTTGCGTAAGGCGGTTTTCTACTACGTcc < 1:8536747/35‑1 (MQ=255) ccAGTTGTTGCGTAAGGCGGGGTTTTTCTACGTcc > 1:8908834/1‑35 (MQ=16) cAGTTGTTGCGTAAGGCGGTTTTCTACTACGTccc < 1:5140482/35‑1 (MQ=255) cAGTTGTTGCGTAAGGCGGGTTTTTTTTACGTccc > 1:20079444/1‑35 (MQ=19) aGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCa < 1:6510846/35‑1 (MQ=255) aGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCa < 1:10200482/35‑1 (MQ=255) aGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCa < 1:462923/35‑1 (MQ=255) aGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCa < 1:14106361/35‑1 (MQ=255) aGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCa < 1:3235688/35‑1 (MQ=255) aGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCa < 1:19353396/35‑1 (MQ=255) aGTTGTTGCGTAAGGCGGGTTTTTTTTACTTcccc > 1:14968449/1‑34 (MQ=12) aGTTGTTGCGTAAGGCGGGTTTTTTCTAACTcccc > 1:1846271/1‑34 (MQ=12) ttgttgCGTAAGGCGGTTTCCTACTACGTCCCAgg < 1:5039877/35‑1 (MQ=255) tgCGTAAGGCGGTTTTCTACTACGTCCCAGGagag < 1:19016352/35‑1 (MQ=255) tgCGTAAGGCGGTTTTCTACTACGTCCCAGGagag < 1:12347048/35‑1 (MQ=255) tgCGTAAGGCGGTTTTCTACTACGTCCCAGGagag < 1:10256014/35‑1 (MQ=255) gCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGt < 1:2689150/35‑1 (MQ=255) gCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGt < 1:3991149/35‑1 (MQ=255) gCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGt < 1:14692794/35‑1 (MQ=255) gCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGt < 1:12112038/35‑1 (MQ=255) gTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTg < 1:16283055/35‑1 (MQ=255) gTAACGCGGTTTTCTACTACGTCCCAGGAGAGTTg > 1:2833741/1‑35 (MQ=255) tAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGc < 1:12144030/35‑1 (MQ=255) aaGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCa < 1:4189990/35‑1 (MQ=255) aaGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCa < 1:10487913/35‑1 (MQ=255) aGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAg < 1:19592071/35‑1 (MQ=255) aGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAg < 1:7588346/35‑1 (MQ=255) aGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAg < 1:14881778/35‑1 (MQ=255) | ACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAG > REL606/4286202‑4286270 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |