New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1076727 = | 60 (0.580) | 8 (0.090) | 5/40 | NT | 14.4% | coding (1182/2547 nt) | torA | trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit |
? | REL606 | 3786648 = | 45 (0.530) | coding (75/339 nt) | ECB_03525 | conserved hypothetical protein |
Only 100 of 109 total aligned reads displayed.
GTGCATGATAATAGGATATCCAATATTGCACAGCCTGGCCGCCAACTGTGATAACGGCATGTTTGAGCT > REL606/3786614‑3786682 | gtgCATGATAATAGGATATCCAATATTGCACAGcc > 1:7348591/1‑35 (MQ=255) gtgCATGATAATAGGATATCCAATATTGCAAAGcc > 1:16534615/1‑35 (MQ=255) tgCATGATAATAGGATATCCAATATTGCACAGCCt > 1:10085700/1‑35 (MQ=255) tgCATGATAATAGGATATCCAATATTGCACAGCCt > 1:6454111/1‑35 (MQ=255) tgCATGATAATAGGATATCCAATATTGCACAACCt > 1:1677333/1‑35 (MQ=255) gCATGATAATAGGATATCCAATATTGCACAGCCTg > 1:17809169/1‑35 (MQ=255) cATGATAATAGGATATCCAATATTGCACAGCCttg > 1:6291228/1‑33 (MQ=255) cATGATAATAGGATATCCAATATTGCACAGCCTgg > 1:147620/1‑35 (MQ=255) cATGATAATAGGATATCCAATATTGCACAGCCTgg > 1:18443438/1‑35 (MQ=255) cATGATAATAGGATATCCAATATTGCACAGCCTgg > 1:4846105/1‑35 (MQ=255) cATGATAATAGGATATCCAATATTGCACAGCCTgg > 1:5856616/1‑35 (MQ=255) tGATAATAGGATATCCAATATTGCACAGCCTGgcc > 1:11866031/1‑35 (MQ=255) gATAATAGGATATCCAATATTGCACAGCCTGgccg > 1:3465278/1‑35 (MQ=255) gATAATAGGATATCCAATATTGCACAGCCTGgccg > 1:8212545/1‑35 (MQ=255) gATAATAGGATATCCAATATTGCACAGCCTGgccg > 1:16098445/1‑35 (MQ=255) ataataGGATATCCAATATTGCACAGCCTGgccgc > 1:19207417/1‑35 (MQ=255) ataataGGATATCCAATATTGCACAGCCTGgccgc > 1:847951/1‑35 (MQ=255) taataGGATATCCAATATTGCACAGCCTGgccgcc > 1:6882457/1‑35 (MQ=255) taGGATATCCAATATTGCACAGCCTGGCCGCCAAc > 1:14230519/1‑35 (MQ=255) tggATATCCAATATTGCACAGCCTGGCCGCCAACt > 1:15055066/2‑35 (MQ=255) aGGATATCCAATATTGCACAGCCTGGCCGCCAACt > 1:2812382/1‑35 (MQ=255) aGGATATCCAATATTGCACAGCCTGGCCGCCAACt > 1:17055562/1‑35 (MQ=255) ggATATCCAATATTGCACAGCCTGGCCGCCAACtg > 1:3818043/1‑35 (MQ=255) ggATATCCAATATTGCACAGCCTGGCCGCCAACtg > 1:8016822/1‑35 (MQ=255) gATATCCAATATTGCACAGCCTGGCCGCCAACtgt > 1:10571383/1‑35 (MQ=255) gATATCCAATATTGCACAGCCTGGCCGCCAACtgt > 1:10644945/1‑35 (MQ=255) gATATCCAATATTGCACAGCCTGGCCGCCAACtgt > 1:1590563/1‑35 (MQ=255) atatCCAATATTGCACAGCCTGGCCGCCAACtgtg > 1:15389796/1‑35 (MQ=255) atatCCAATATTGCACAGCCTGGCCGCCAACtgtg > 1:14565301/1‑35 (MQ=255) atCCAATATTGCACAGCCTGGCCGCCAACTGTGAt > 1:11678008/1‑35 (MQ=255) atCCAATATTGCACAGCCTGGCCGCCAACTGTGAt > 1:13316591/1‑35 (MQ=255) atCCAATATTGCAAAGCCTGGCCGCCAACTGTGAt < 1:429702/35‑1 (MQ=255) tCCAATATTGCACAGCCTGGCCGCCAACTGTGATa > 1:16710145/1‑35 (MQ=255) ccAATATTGCACAGCCTGGCCGCCAACTGTGATaa > 1:13238295/1‑35 (MQ=255) cAATATTGCACAGCCTGGCCTCCAACTGTGATAAc > 1:19198077/1‑35 (MQ=255) cAATATTGCACAGCCTGGCCGCCAACTGTGATAAc > 1:14626395/1‑35 (MQ=255) cAATATTGCACAGCCTGGCCGCCAACTGTGATAAc > 1:19795288/1‑35 (MQ=255) cAATATTGCACAGCCTGGCCGCCAACTGTGATAAc > 1:10971224/1‑35 (MQ=255) cAATATTGCACAGCCTGGCCGCCAACTGTGATAAc > 1:11135483/1‑35 (MQ=255) aatatgccccagcCTGGCCGCCAACTGTGATAACg < 1:10905499‑M2/22‑1 (MQ=255) aatatgccccagcCTGGCCGCCAACTGTGATAACg < 1:9249030‑M2/22‑1 (MQ=255) aaTATTGCACAGCCTGGCCGCCAACTGTGATAACg > 1:10833010/1‑35 (MQ=255) aaTATTCCCCAGCCTGGCCGCCAACTGTGATAACg < 1:4269283/35‑1 (MQ=37) atttggcccagcCTGGCCGCCAACTGTGATAACgg < 1:203262‑M2/23‑1 (MQ=255) atttcccccagcCTGGCCGCCAACTGTGATAACgg < 1:11372977‑M2/23‑1 (MQ=255) atatTGCACAGCCTGGCCGCCAACTGTGATaaaga > 1:18550825/1‑32 (MQ=255) atatTGCACAGCCTGGCCGCCAACTGTGATAACgg > 1:9545232/1‑35 (MQ=255) atatTGCACAGCCTGGCCGCCAACTGTGATAACgg > 1:17101364/1‑35 (MQ=255) atatTGCACAGCCTGGCCGCCAACTGTGATAACgg > 1:6129260/1‑35 (MQ=255) tttcccccagcCTGGCCGCCAACTGTGATAACGGc < 1:194887‑M2/24‑1 (MQ=255) ttgccccagcCTGGCCGCCAACTGTGATAACGGCa < 1:6536941‑M2/25‑1 (MQ=255) atgccccagcCTGGCCGCCAACTGTGATAACGGCa < 1:1310456‑M2/25‑1 (MQ=255) atTGCACAGCCTGGCCGCCAACTGTGATAACGGCa > 1:5875579/1‑35 (MQ=255) atTGCACAGCCTGGCCGCCAACTGTGATAACGGCa > 1:2091710/1‑35 (MQ=255) atTGCACAGCCTGGCCGCCAACTGTGATAACGGCa > 1:7718480/1‑35 (MQ=255) atTGCACAGCCTGGCCGCCAACTGTGATAACGGCa > 1:20057028/1‑35 (MQ=255) ttgcccagcCTGGCCGCCAACTGTGATAACGGCAt < 1:15175033‑M2/26‑1 (MQ=255) ttGCACAGCCTGGCCGCCAACTGTGATAACGGCAt > 1:14706501/1‑35 (MQ=255) tgccccagcCTGGCCGCCAACTGTGATAACGGCAt < 1:2798884‑M2/26‑1 (MQ=255) tGCACAGCCTGGCCGCCAACTGTGATAACGGCATg > 1:5503056/1‑35 (MQ=255) tGCACAGCCTGGCCGCCAACTGTGATAACGGCATg > 1:8170315/1‑35 (MQ=255) tGCACAGCCTGGCCGCCAACTGTGATAACGGCATg > 1:2910663/1‑35 (MQ=255) gCACAGCCTGGCCGCCAACTGTGATAACGGCATGt > 1:6012667/1‑35 (MQ=255) gCACAGCCTGGCCGCCAACTGTGATAACGGCATGt > 1:14677652/1‑35 (MQ=255) gCACAGCCTGGCCGCCAACTGTGATAACGGCATGt > 1:2116450/1‑35 (MQ=255) ccccagcCTGGCCGCCAACTGTGATAACGGCATGt < 1:15279511‑M2/28‑1 (MQ=255) cccagcCTGGCCGCCAACTGTGATAACGGCATGtt < 1:894581‑M2/29‑1 (MQ=255) cccagcCTGGCCGCCAACTGTGATAACGGCATGtt < 1:11612674‑M2/29‑1 (MQ=255) cacaGCCTGGCCGCCAACTGTGATAACGGCATGtt < 1:7822783/35‑1 (MQ=255) ccagcCTGGCCGCCAACTGTGATAACGGCATGttt < 1:13965963‑M2/30‑1 (MQ=255) ccagcCTGGCCGCCAACTGTGATAACGGCATGttt < 1:15097603‑M2/30‑1 (MQ=255) acaGCCTGGCCGCCAACTGTGATAACGGCATTttt > 1:4490086/1‑35 (MQ=255) acaGCCTGGCCGCCAACTGTGATAACGGCATGttt > 1:14403138/1‑35 (MQ=255) acaGCCTGGCCGCCAACTGTAATAACGGCATGttt > 1:6629093/1‑35 (MQ=255) cagcCTGGCCGCCAACTGTGATAACGGCATGTTTg > 1:16835668‑M2/5‑35 (MQ=255) cagcCTGGCCGCCAACTGTGATAACGGCATGTTTg < 1:5958240‑M2/31‑1 (MQ=255) cagcCTGGCCGCCAACTGTGATAACGGCATGTTTg > 1:13297404‑M2/5‑35 (MQ=255) cagcCTGGCCGCCAACTGTGATAACGGCATGTTTg > 1:19478588‑M2/5‑35 (MQ=255) cagcCTGGCCGCCAACTGTGATAACGGCATGTTTg > 1:19495353‑M2/5‑35 (MQ=255) cagcCTGGCCGCCAACTGTGATAACGGCATGTTTg > 1:13362535‑M2/5‑35 (MQ=255) cagcCTGGCCGCCAACTGTGATAACGGCATGTTTg > 1:378190‑M2/5‑35 (MQ=255) agcCTGGCCGCCAACTGTGATAACGGCATGTTTGa < 1:8507605‑M2/32‑1 (MQ=255) agcCTGGCCGCCAACTGTGATAACGGCATGTTTGa > 1:17369187‑M2/4‑35 (MQ=255) agcCTGGCCGCCAACTGTGATAACGGCATGTTTGa < 1:2756243‑M2/32‑1 (MQ=255) agcCTGGCCGCCAACTGTGATAACGGCATGTTTGa > 1:19010127‑M2/4‑35 (MQ=255) agcCTGGCCGCCAACTGTGATAACGGCATGTTTGa < 1:5172150‑M2/32‑1 (MQ=255) agcCTGGCCGCCAACTGTGATAACGGCATGTTTGa > 1:2206674‑M2/4‑35 (MQ=255) gcCTGGCCGCCAACTGTGATAACGGCATGTTTGAg < 1:15678713‑M2/33‑1 (MQ=255) gcCTGGCCGCCAACTGTGATAACGGCATGTTTGAg > 1:6894233‑M2/3‑35 (MQ=255) gcCTGGCCGCCAACTGTGATAACGGCATGTTTGAg > 1:3367634‑M2/3‑35 (MQ=255) gcCTGGCCGCCAACTGTGATAACGGCATGTTTGAg < 1:14457345‑M2/33‑1 (MQ=255) cCTGGCCGCCAACTGTGATAACGGCATGTTTGAGc > 1:18295397‑M2/2‑35 (MQ=255) cCTGGCCGCCAACTGTGATAACGGCATGTTTGAGc < 1:5147051‑M2/34‑1 (MQ=255) cTGGCCGCCAACTGTGATAACGGCATGTTTGAGCt > 1:13562392/1‑35 (MQ=255) cTGGCCGCCAACTGTGATAACGGCATGTTTGAGCt < 1:2486961/35‑1 (MQ=255) cTGGCCGCCAACTGTGATAACGGCATGTTTGAGCt > 1:11405371/1‑35 (MQ=255) cTGGCCGCCAACTGTGATAACGGCATGTTTGAGCt < 1:3687876/35‑1 (MQ=255) cTGGCCGCCAACTGTGATAACGGCATGTTTGAGCt < 1:3979398/35‑1 (MQ=255) cTGGCCGCCAACTGTGATAACGGCATGTTTGAGCt < 1:16420642/35‑1 (MQ=255) cTGGCCGCCAACTGTGATAACGGCATGTTTGAGCt > 1:17019634/1‑35 (MQ=255) | GTGCATGATAATAGGATATCCAATATTGCACAGCCTGGCCGCCAACTGTGATAACGGCATGTTTGAGCT > REL606/3786614‑3786682 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |