New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3281469 = | 113 (1.100) | 21 (0.220) | 7/44 | NT | 18.2% | coding (62/288 nt) | yhbH | predicted ribosome‑associated, sigma 54 modulation protein |
? | REL606 | = 4043982 | 85 (0.900) | coding (42/1404 nt) | yihO | predited transporter |
Only 100 of 181 total aligned reads displayed.
AACCAACGTCGCCCATACCATAGGCGATTTTTTCCCACAGATTCAGTTTTAATGTCAGTGGATTATGGT > REL606/4043948‑4044016 | aaCCAACGTCGCCCATACCATAGGCGATTTTTTcc > 1:3590960/1‑35 (MQ=255) aaCCAACGTCGCCCATACCATAGGCGATTTTTTcc > 1:11708470/1‑35 (MQ=255) aCCAACGTCGCCCATACCATAGGCGATTTTTTtcc > 1:18307971/1‑35 (MQ=255) aCCAACGTCGCCCATACCATAGGCGATTTTTTCCc > 1:20368352‑M2/1‑34 (MQ=255) aCCAACGTCGCCCATACCATAGGCGATTTTTTCCc < 1:2003310‑M2/35‑2 (MQ=255) aCCAACGTCGCCCATACCATAGGCGATTTTTTCCc > 1:16019840‑M2/1‑34 (MQ=255) ccAACGTCGCCCATACCATAGGCGATTTTTTCCca > 1:6389363‑M2/1‑33 (MQ=255) cAACGTCGCCCATACCATAGGCGATTTTTTCCcac < 1:5413887/35‑1 (MQ=255) cAACGTCGCCCATACCATAGGCGATTTTTTCCcac > 1:18888934/1‑35 (MQ=255) cAACGTCGCCCATACCATAGGCGATTTTTTCCcac > 1:18563883/1‑35 (MQ=255) aaCGTCGCCCATACCATAGGCGATTTTTTCCcccc < 1:4821611‑M2/35‑5 (MQ=255) aaCGTCGCCCATACCATAGGCGATTTTTTCCcaca < 1:20105295/35‑1 (MQ=255) aaCGTCGCCCATACCATAGGCGATTTTTTCCcaca < 1:10916584/35‑1 (MQ=255) aCGTCGCCCATACCATAGGCGATTTTTTCCCACAg > 1:2837257/1‑35 (MQ=255) aCGTCGCCCATACCATAGGCGATTTTTTCCCACAg > 1:18581740/1‑35 (MQ=255) cGTCGCCCATACCATAGGCGATTTTTTCCCACAGa < 1:7127857/35‑1 (MQ=255) cGTCGCCCATACCATAGGCGATTTTTTCCCACAGa > 1:17831840/1‑35 (MQ=255) cGTCGCCCATACCATAGGCGATTTTTTCCCACAGa < 1:13656862/35‑1 (MQ=255) cGTCGCCCATACCATAGGCGATTTTTTCCCACAGa > 1:18485678/1‑35 (MQ=255) gTCGCCCATACCATAGGCGATTTTTTTCCCCAGAt > 1:6897713/1‑35 (MQ=37) gTCGCCCATACCATAGGCGATTTTTTCCCCCAGAt > 1:5835320/1‑35 (MQ=255) gTCGCCCATACCATAGGCGATTTTTTCCCCCAGAt > 1:14041770/1‑35 (MQ=255) gTCGCCCATACCATAGGCGATTTTTTCCCACAGAt < 1:19898173/35‑1 (MQ=255) gTCGCCCATACCATAGGCGATTTTTTCCCACAGAt > 1:624170/1‑35 (MQ=255) gTCGCCCATACCATAGGCGATTTTTTCCCACAGAt > 1:1072693/1‑35 (MQ=255) tCGCCCATACCATAGGCGATTTTTTCCCACAGAtt < 1:4793053/35‑1 (MQ=255) tCGCCCATACCATAGGCGATTTTTTCCCACAGAtt > 1:422893/1‑35 (MQ=255) tCGCCCATACCATAGGCGATTTTTTCCCACAGAtt > 1:8444986/1‑35 (MQ=255) cGCCCATACCATAGGCGATTTTTTCCCACAGATTc < 1:2043848/35‑1 (MQ=255) gCCCATACCATAGGCGATTTTTTCCCACAGATTCa < 1:14658662/35‑1 (MQ=255) cccATACCATAGGCGATTTTTTCCCACAGATTCAg > 1:15146582/1‑35 (MQ=255) cccATACCATAGGCGATTTTTTCCCACAGATTCAg < 1:3845740/35‑1 (MQ=255) cccATACCATAGGCGATTTTTTCCCACAGATTCAg > 1:3748846/1‑35 (MQ=255) ccataccataGGCGATTTTTTCCCACAGATTCAGt < 1:6716623/35‑1 (MQ=255) cataccataGGCGATTTTTTCCCACAGATTCAGtt < 1:2418987/35‑1 (MQ=255) cataccataGGCGATTTTTTCCCACAGATTCAGtt < 1:14112786/35‑1 (MQ=255) cataccataGGCGATTTTTTCCCACAGATTCAGtt < 1:17307702/35‑1 (MQ=255) ataccataGGCGATTTTTTCCCCCAGATTCAGttt > 1:14590397/1‑35 (MQ=255) ataccataGGCGATTTTTTCCCCCAGATTCAGttt > 1:18273715/1‑35 (MQ=255) ataccataGGCGATTTTTTCCCACAGATTCAGttt > 1:3024727/1‑35 (MQ=255) ataccataGGCGATTTTTTCCCACAGATTCAGttt < 1:4167617/35‑1 (MQ=255) ataccataGGCGATTTTTTCCCACAGATTCAGttt < 1:4325813/35‑1 (MQ=255) ataccataGGCGATTTTTTCCCACAGATTCAGttt < 1:9136643/35‑1 (MQ=255) ataccataGGCGATTTTTTCCCACAGATTCAGttt < 1:14937132/35‑1 (MQ=255) taccataGGCGATTTTTTCCCACAGATTCAGtttt < 1:15784520/35‑1 (MQ=255) accataGGCGATTTTTTCCCACAGATTTAGTTTTa > 1:2532710/1‑35 (MQ=255) accataGGCGATTTTTTCCCACAGATTCAGTTTTa < 1:13811890/35‑1 (MQ=255) ccataGGCGATTTTTTCCCACAGATTCAGTTTTaa < 1:3401906/35‑1 (MQ=255) ataGGCGATTTTTTCCCACAGATTCAGTTTTAATg < 1:14390221/35‑1 (MQ=255) taGGCGATTTTTTCCCACAGATTCAGTTTTAATGt < 1:18086601/35‑1 (MQ=255) taGGCGATTTTTTCCCACAGATTCAGTTTTAATGt > 1:11642804/1‑35 (MQ=255) aGGCGATTTTTTCCCACAGATTCAGTTTTAATGTc < 1:10788110/35‑1 (MQ=255) aGGCGATTTTTTCCCACAGATTCAGTTTTAATGTc < 1:1628892/35‑1 (MQ=255) aGGCGATTTTTTCCCACAGATTCAGTTTTAATGTc > 1:13964923/1‑35 (MQ=255) aGGCGATTTTTTCCCACAGATTCAGTTTTAATGTc > 1:10279640/1‑35 (MQ=255) ggCGATTTTTTCCCACAGATTCAGTTTTAATGTCa < 1:9801433/35‑1 (MQ=255) ggCGATTTTTTCCCACAGATTCAGTTTTAATGTCa < 1:20134727/35‑1 (MQ=255) ggCGATTTTTTCCCACAGATTCAGTTTTAATGTCa > 1:15338457/1‑35 (MQ=255) gCGATTTTTTCCcagccaaatttgccaaacttgag > 1:8692780‑M2/1‑12 (MQ=255) gCGATTTTTTCCCACAGATTCAGTTTTAATGTCAg < 1:11871290/35‑1 (MQ=255) gCGATTTTTTCCCACAGATTCAGTTTTAATGTCAg < 1:6455308/35‑1 (MQ=255) gCGATTTTTTCCCACAGATTCAGTTTTAATGTCAg > 1:16081939/1‑35 (MQ=255) gCGATTTTTTCCCACAGATTCAGTTTTAATGTCAg > 1:1821070/1‑35 (MQ=255) gCGATTTTGTCCcagccaaatttgccaaacttgag > 1:12247741‑M2/1‑12 (MQ=255) gCGATTTTGTCCcagccaaatttgccaaacttgag > 1:5780013‑M2/1‑12 (MQ=255) cGATTTTTTCCCACAGATTCAGTTTTAATGTCAGt < 1:16588124/35‑1 (MQ=255) cGATTTTTTCCCACAGATTCAGTTTTAATGTCAGt < 1:19670605/35‑1 (MQ=255) cGATTTTTTCCCACAGATTCAGTTTTAATGTCAGt < 1:18405452/35‑1 (MQ=255) gATTTTTTCCCACAGATTCAGTTTTAATGTCAggg > 1:7255233/1‑33 (MQ=255) gATTTTTTCCCACAGATTCAGTTTTAATGTCAGTg < 1:105216/35‑1 (MQ=255) gATTTTTTCCAACAGATTCAGTTTTAATGTCAGTg < 1:8214837/35‑1 (MQ=255) gATTTTGTCCcagccaaatttgccaaacttgagca > 1:5965406‑M2/1‑10 (MQ=255) aTTTTTTCCCACAGATTCAGTTTTAATGTCAGTgg < 1:4116490/35‑1 (MQ=255) aTTTTTTCCCACAGATTCAGTTTTAATGTCAGTgg < 1:17133264/35‑1 (MQ=255) aTTTTTTCCCACAGATTCAGTTTTAATGTCAGTgg < 1:4526856/35‑1 (MQ=255) aTTTTGTCCcagccaaatttgccaaacttgagcaa > 1:12864044‑M2/1‑9 (MQ=255) ttttttCCCACAGATTCAGTTTTAATGTCAGTGGa < 1:13319538/35‑1 (MQ=255) tttttTCcagccaaatttgccaaacttgagcaata > 1:6156943‑M2/1‑7 (MQ=255) tttttCCcagccaaatttgccaaacttgagcaata > 1:9328863‑M2/1‑7 (MQ=255) tttttCCCACAGATTCAGTTTTAATGTCAGTGGAt < 1:19540208/35‑1 (MQ=255) tttttCCCACAGATTCAGTTTTAATGTCAGGgggt > 1:19306758/1‑33 (MQ=38) tttttCCCACAGATTCAGTTTTAATGTCAGGgggt > 1:15734884/1‑33 (MQ=38) ttttCCcagccaaatttgccaaacttgagcaatat > 1:9043253‑M2/1‑6 (MQ=255) ttttCCCACAGATTCAGTTTTAATGTCAGGggggt > 1:19737754/1‑32 (MQ=37) tttCCcagccaaatttgccaaacttgagcaatatt > 1:17865687‑M2/1‑5 (MQ=255) tttCCCACAGATTCAGTTTTAATGTCAGTGGATTa < 1:11190783/35‑1 (MQ=255) ttCCCACAGATTCAGTTTTAATGTCAGTGGATTAt < 1:20585562/35‑1 (MQ=255) ttCCCACAGATTCAGTTTTAATGTCAGTGGATTAt < 1:8125753/35‑1 (MQ=255) ttCCCACAGATTCAGTTTTAATGTCAGTGGATTAt < 1:565933/35‑1 (MQ=255) gtcCcagccaaatttgccaaacttgagcaatattt > 1:10845657‑M2/2‑4 (MQ=255) ctcCcagccaaatttgccaaacttgagcaatattt > 1:2209296‑M2/2‑4 (MQ=255) tCCcagccaaatttgccaaacttgagcaatatttt > 1:8675197‑M2/1‑3 (MQ=255) tCCCACAGATTCAGTTTTAATGTCATTGGATTATg > 1:16449592/1‑35 (MQ=255) tCCCACAGATTCAGTTTTAATGTCAGTGGATTATg < 1:17567795/35‑1 (MQ=255) tccagccaaatttgccaaacttgagcaatattttg > 1:12902545‑M2/2‑2 (MQ=255) cccagccaaatttgccaaacttgagcaatattttg > 1:18123752‑M2/1‑2 (MQ=255) cccACAGATTCAGTTTTAATGTCAGTGGATTATgg < 1:7814460/35‑1 (MQ=255) cccACAGATTCAGTTTTAATGTCAGGGGGATATgg > 1:4976262/1‑35 (MQ=25) cccACAGATTCAGTTTTAATGTCAGGGGAGTAttg > 1:7818861/1‑33 (MQ=25) ccACAGATTCAGTTTTAATGTCAGTGGATTATGGt < 1:12550055/35‑1 (MQ=255) | AACCAACGTCGCCCATACCATAGGCGATTTTTTCCCACAGATTCAGTTTTAATGTCAGTGGATTATGGT > REL606/4043948‑4044016 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |