New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 505984 = | 28 (0.270) | 12 (0.130) | 6/42 | NT | 16.8% | coding (808/816 nt) | allR | DNA‑binding transcriptional repressor |
? | REL606 | 2525727 = | 94 (1.050) | coding (4/1350 nt) | hyfD | hydrogenase 4 membrane subunit |
CCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAG > REL606/505950‑506018 | tgcacagcgtggtcagtgcggcgaacaaaaccccc > 1:16769951‑M1/35‑35 (MQ=255) tgcacagcgtggtcagtgcggcgaacaaaaccccc < 1:1420543‑M1/1‑1 (MQ=255) tgcacagcatggtcagtgcggcgaacaaaaccccc > 1:5956644‑M1/35‑35 (MQ=255) ccgcGATATCAGCACGGCGTTGGGACTGAAAGcac < 1:278040/35‑1 (MQ=255) ccgcGATATCAGCACGGCGTTGGGACTGAAAGcac < 1:3646695/35‑1 (MQ=255) ccgcGATATCAGCACGGCGTTGGGACTGAAAGcac > 1:15096324/1‑35 (MQ=255) ccgcGATATCAGCACGGCGTTGGGACTGAAAGcac < 1:19621870/35‑1 (MQ=255) ccgcGATATCAGCACGGCGTTGGGACTGAAAGcac > 1:18862965/1‑35 (MQ=255) gcacagcgtggtcagtgcggcgaacaaaaccccca < 1:10297999‑M1/2‑1 (MQ=255) gcacagcgtggtcagtgcggcgaacaaaaccccca < 1:15913968‑M1/2‑1 (MQ=255) gcacagcgtggtcagtgcggcgaacaaaaccccca < 1:3352591‑M1/2‑1 (MQ=255) gcacagcgtggtcagtgaggcgaacaaaaccccca > 1:14366095‑M1/34‑35 (MQ=255) cgcgATATCAGCACGGCGTTGGGACTGAAAGcaca < 1:17585256/35‑1 (MQ=255) cgcgATATCAGCACGGCGTTGGGACTGAAAGcaca < 1:18278628/35‑1 (MQ=255) cgcgATATCAGCACGGCGTTGGGACTGAAAGcaca < 1:13592869/35‑1 (MQ=255) cgcgATATCAGCACGGCGTTGGGACTGAAAGcaca > 1:6025868/1‑35 (MQ=255) cgcgATATCAGCACGGCGTTGGGACTGAAAGcaca < 1:6191929/35‑1 (MQ=255) cgcgATATCAGCACGGCGTTGGGACTGAAAGcaca > 1:2944353/1‑35 (MQ=255) gcgATATCAGCACGGCGTTGGGACTGAAAGCACAt < 1:4544100/35‑1 (MQ=255) gcgATATCAGCACGGCGTTGGGACTGAAAGCACAt < 1:16094506/35‑1 (MQ=255) gcgATATCAGCACGGCGTTGGGACTGAAAGCACAt > 1:8842279/1‑35 (MQ=255) gcgATATCAGCACGGCGTTGGGACTGAAAGCACAt < 1:8565247/35‑1 (MQ=255) gcgATATCAGCACGGCGTTGGGACTGAAAGCACAt < 1:11991540/35‑1 (MQ=255) gcgATATCAGCACGGCGTTGGGACTGAAAGCACAt < 1:12443888/35‑1 (MQ=255) cccagcgtggtcagtgcggcgaacaaaacccccat > 1:154244‑M1/33‑35 (MQ=255) cacagcgtggtcagtgcggcgaacaaaacccccat > 1:16979533‑M1/33‑35 (MQ=255) cacagcgtggtcagtgcggcgaacaaaacccccat < 1:4121553‑M1/3‑1 (MQ=255) cacagcgtggtcagtgcggcgaacaaaacccccat < 1:10447813‑M1/3‑1 (MQ=255) cacagcgtggtcagtgcggcgaacaaaacccccat > 1:18201691‑M1/33‑35 (MQ=255) cacagcgtggtcagtgcggcgaacaaaacccccat > 1:4809163‑M1/33‑35 (MQ=255) cacagcgtggtcagtgcggcgaacaaaacccccat < 1:12560634‑M1/3‑1 (MQ=255) cacagcgtggtcagtgcggcgaacaaaacccccat > 1:15838230‑M1/33‑35 (MQ=255) cgATATCAGCACGGCGTTGGGACTGAAAGCACATc < 1:5319464/35‑1 (MQ=255) cgATATCAGCACGGCGTTGGGACTGAAAGCACATc > 1:8742487/1‑35 (MQ=255) gATATCAGCACGGCGTTGGGACTGAAAGCACATcc > 1:2351052/1‑35 (MQ=255) gATATCAGCACGGCGTTGGGACTGAAAGCACATcc < 1:11224652/35‑1 (MQ=255) gATATCAGCACGGCGTTGGGACTGAAAGCACATcc > 1:7167559/1‑35 (MQ=255) atatCAGCACGGCGTTGTGACTGAAAGCACATCCa > 1:11760905/1‑35 (MQ=255) atatCAGCACGGCGTTGGGACTGAAAGCACATCCa < 1:4375738/35‑1 (MQ=255) atatCAGCACGGCGTTGGGACTGAAAGCACATCCa > 1:14039054/1‑35 (MQ=255) tatCAGCACGGCGTTGGGACTGAAAGCACATCCAt > 1:19747497/1‑35 (MQ=255) tatCAGCACGGCGTTGGGACTGAAAGCACATCCAt > 1:15050295/1‑35 (MQ=255) tatCAGCACGGCGTTGGGACTGAAAGCACATCCAt > 1:4996762/1‑35 (MQ=255) atCAGCACGGCGTTGGGACTGAAAGCACATCCATa > 1:19831719/1‑35 (MQ=255) atCAGCACGGCGTTGGGACTGAAAGCACATCCATa > 1:20372305/1‑35 (MQ=255) tCAGCACGGCGTTGGGACTGAAAGCACATCCATaa > 1:15431704/1‑35 (MQ=255) tCAGCACGGCGTTGGGACTGAAAGCACATCCATaa > 1:4932557/1‑35 (MQ=255) gCACGGCGTTGGGACTGAAAGCACATCCATAAtgt > 1:17400971/1‑35 (MQ=255) cACGGCGTTGGGACTGAAAGCACATCCATAAtgtc > 1:4616408/1‑35 (MQ=255) cACGGCGTTGGGACTGAAAGCACATCCATAAtgtc > 1:14316375/1‑35 (MQ=255) cACGGCGTTGGGACTGAAAGCACATCCATAAtgtc > 1:8389616/1‑35 (MQ=255) cACGGCGTGGGGACTGAAAGCACATACATAAtgtc < 1:237979/35‑1 (MQ=37) aCGGCGTTGGGACTGAAAGCACATCCATAAtgtct > 1:7990852/1‑35 (MQ=255) aCGGCGTTGGGACTGAAAGCACATCCATAAtgtct > 1:9367052/1‑35 (MQ=255) cGGCGTTGGGACTGAAAGCACATCCATAAtgtctg > 1:11559079/1‑35 (MQ=255) ggCGTTGGGACTGAAAGCACATCCATAAtgtctgg > 1:2957892/1‑34 (MQ=255) ggCGTTGGGACTGAAAGCACATCCATAAtgtctgg > 1:9892235/1‑34 (MQ=255) ggCGTTGGGACTGAAAGCACATCCATAAtgtctgg > 1:2872182/1‑34 (MQ=255) ggCGTTGGGACTGAAAGCACATCCATAAtgtctgg > 1:1659531/1‑34 (MQ=255) gCGTTGGGACTGAAAGCACATCCATAAtgtctggg > 1:11321930/1‑33 (MQ=255) cGTTGGGACTGAAAGCACATCCATAAtgtctgggg > 1:8383390/1‑32 (MQ=255) gtggggACGAAAACCCCATCCATAATGTCTGTCGc < 1:16170940/32‑1 (MQ=12) tgggaacaaaaccccCATCCATAATGTCTGTCGCa > 1:5850326‑M1/16‑35 (MQ=255) tGGGACTAAACCCCCATCCATAATGTCTGTCGCAt < 1:11103429/35‑1 (MQ=19) gggACAAAAACCCCATCCATAATGTCTGTCGCATc < 1:12201444/35‑1 (MQ=19) gaacaaaaccccCATCCATAATGTCTGTCGCATcc > 1:4787997‑M1/13‑35 (MQ=255) actaaaccccCATCCATAATGTCTGTCGCATCCCg > 1:3594940‑M1/11‑35 (MQ=255) acaaaaccccCATCCATAATGTCTGTCGCATCCCg > 1:3006655‑M1/11‑35 (MQ=255) caaaaccccCATCCATAATGTCTGTCGCATCCCGc > 1:15032790‑M1/10‑35 (MQ=255) cTGAAAGCACATCCATAATGTCTGGCGGATtcccc > 1:1447666/1‑33 (MQ=21) aaaaccccCATCCATAATGTCTGTCGCATCCCGct > 1:12910844‑M1/9‑35 (MQ=255) aaaaccccCATCCATAATGTCTGTCGCATCCCGct > 1:11001147‑M1/9‑35 (MQ=255) aaaaccccCATCCATAATGTCTGTCGCATCCCGct > 1:10946807‑M1/9‑35 (MQ=255) gaaccccCATCCATAATGTCTGTCGCATCCCGctc > 1:5809194‑M1/8‑35 (MQ=255) caaacccCATCCATAATGTCTGTCGCATCCCGctc > 1:5085824‑M1/8‑35 (MQ=255) aaaacccCATCCATAATGTCTGTCGCATCCCGctc > 1:14446872‑M1/8‑35 (MQ=255) aaccccCATCCATAATGTCTGTCGCATCCCGctct > 1:12148317‑M1/7‑35 (MQ=255) accccCATCCATAATGTCTGTCGCATCCCGCTCTg > 1:17307965‑M1/6‑35 (MQ=255) aacccCATCCATAATGTCTGTCGCATCCCGCTCTg > 1:15337725‑M1/6‑35 (MQ=255) gcccCATCCATAATGTCTGTCGCATCCCGCTCTGc > 1:13251042‑M1/5‑35 (MQ=255) ccccCATCCATAATGTCTGTCGCATCCCGCTCTGc > 1:3523611‑M1/5‑35 (MQ=255) gccCATCCATAATGTCTGTCGCATCCCGCTCTGCg > 1:18957142‑M1/4‑35 (MQ=255) cccCATCCATAATGTCTGTCGCATCCCGCTCTGCg > 1:10273900‑M1/4‑35 (MQ=255) ccCATCCATAATGTCTGTCGCATCCCGCTCTGCgg > 1:17086068‑M1/3‑35 (MQ=255) ccCATCCATAATGTCTGTCGCATCCCGCTCTGCgg > 1:11743136‑M1/3‑35 (MQ=255) cCATCCATAATGTCTGTCGCATCCCGCTCTGCGGa > 1:288511‑M1/2‑35 (MQ=255) cCATCCATAATGTCTGTCGCATCACGCTCTGCGGa > 1:1696120‑M1/2‑35 (MQ=255) CATCCATAATGTCTGTCGCATCCCGCTCTGCGGAg > 1:12038992‑M1/1‑35 (MQ=255) CATCCATAATGTCTGTCGCATCCCGCTCTGCGGAg > 1:8224163‑M1/1‑35 (MQ=255) CATCCATAATGTCTGTCGCATCCCGCTCTGCGGAg > 1:18536416‑M1/1‑35 (MQ=255) CATCCATAATGTCTGTCGCATCCCGCTCTGCGGAg > 1:4115799‑M1/1‑35 (MQ=255) CATCCATAATGTCTGTCGCATCCAGCTCTGCGGAg > 1:12254385‑M1/1‑35 (MQ=255) | CCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAG > REL606/505950‑506018 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |