Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 1,420,709 | +GA :: IS3 (+) +4 bp | 14.6% | intergenic (+21/‑9) | ynaK → / → ECB_01341 | conserved protein/hypothetical protein |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1420709 = | 60 (0.780) | 11 (0.120) | 10/44 | NT | 13.0% | intergenic (+21/‑12) | ynaK/ECB_01341 | conserved protein/hypothetical protein |
? | REL606 | = 1443893 | NA (NA) | noncoding (1255/1255 nt) | IS3 | repeat region | |||||
* | ? | REL606 | = 1420712 | 69 (0.810) | 11 (0.110) | 11/46 | NT | 12.2% | intergenic (+24/‑9) | ynaK/ECB_01341 | conserved protein/hypothetical protein |
? | REL606 | 1607918 = | NA (NA) | coding (15/1320 nt) | ECB_01510 | putative tail component of prophage |
CAGGGATTTAAATAAATCATTTATTACAACAGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1420678‑1420712 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > REL606/1607918‑1607951 CAGGGATTTAAATAAATCATTTATTACAACAGGCT < 1:6681764/35‑1 CAGGGATTTAAATAAATCATTTATTACAACAGGCT < 1:13249009/35‑1 CAGGGATTTAAATAAATCATTTATTACAACAGGCT > 1:15606382/1‑35 TAAATAAATCATTTATTACAACAGGCTGATCTTAC < 1:20108480/35‑1 AAATAAATCATTTATTACAACAGGCTGATCTTACC > 1:12954301/1‑35 ATAAATCATTTATTACAACAGGCTGATCTTACCCA > 1:7628271/1‑35 AATCATTTATTACAACAGGCTGATCTTACCCAGCA > 1:11546969/1‑35 CATTTATTACAACAGGCTGATCTTACCCAGCAATA > 1:1871483/1‑35 CATTTATTACAACAGGCTGATCTTACCCAGCAATA < 1:6636569/35‑1 TTTATTACAACAGGCTGATCTTACCCAGCAATAGT < 1:6059269/35‑1 TTATTACAACAGGCTGATCTTACCCAGCAATAGTG < 1:4018553/35‑1 TACAACAGGCTGATCTTACCCAGCAATAGTGGACA < 1:7828339/35‑1 ACAACAGGCTGATCTTACCCAGCAATAGTGGACAC > 1:18241532/1‑35 ACAGGCTGATCTTACCCAGCAATAGTGGACACGCG < 1:13884621/35‑1 CTGATCTTACCCAGCAATAGTGGACACGCTGCTAA > 1:16409699/1‑35 CTGATCTTACCCAGCAATAGTGGACACGCGGCTAA > 1:15459339/1‑35 CTGATCTTACCCAGCAATAGTGGACACGCGGCTAA > 1:8421163/1‑35 CTGATCTTACCCAGCAATAGTGGACACGCGGCTAA > 1:8677302/1‑35 CTGATCTTACCCAGCAATAGTGGACACGCGGCTAA < 1:5149165/35‑1 CTGATCTTACCCAGCAATAGTGGACACGCGGCTAA < 1:18167789/35‑1 CTGATCTTACCCAGCAATAGTGGACACGCGGCTAA > 1:2872768/1‑35 CTGATCTTACCCAGCAATAGTGGACACGCGGCTAA < 1:5480941/35‑1 CTGATCTTACCCAGCAATAGTGGACACGCGGCTAA > 1:1889046/1‑35 TGATCTTACCCAGCAATAGTGGACACGCTGCTAAG > 1:5702385/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGGTAAG > 1:5203758/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:5713926/35‑1 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > 1:6793023/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:8268982/35‑1 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:8821101/35‑1 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:8971468/35‑1 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:9902548/35‑1 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:10307756/35‑1 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > 1:11286236/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:12022591/35‑1 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:13225826/35‑1 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > 1:13681996/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > 1:14045692/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:16356774/35‑1 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > 1:16883588/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:16990722/35‑1 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > 1:17804038/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > 1:1825805/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > 1:18444677/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:18905772/35‑1 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:18957966/35‑1 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > 1:229279/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > 1:2341735/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > 1:2915025/1‑35 TGATCTTACCCAGCAATAGTGGACACGCGGCCAAG > 1:1056605/1‑35 CAGGGATTTAAATAAATCATTTATTACAACAGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1420678‑1420712 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGATCTTACCCAGCAATAGTGGACACGCGGCTAAG > REL606/1607918‑1607951 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |