New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1889905 | 87 (0.850) | 12 (0.130) | 5/42 | NT | 17.4% | coding (1053/1374 nt) | yebQ | predicted transporter |
? | REL606 | 2379272 = | 38 (0.420) | coding (970/1014 nt) | usg | hypothetical protein |
Only 100 of 103 total aligned reads displayed.
TACTCCTGCACCAGTTTCTCGGCGATTTTTACTGCCATCAGCGCGCCGCCAAAGCGAACGTTATCGGCC > REL606/2379238‑2379306 | tACTCCTGCACCAGTTTCTCGGCGATTTTTATTGc > 1:8399508/1‑35 (MQ=255) tACTCCTGCACCAGTTTCTCGGCGATTTTTACTGc < 1:2725849/35‑1 (MQ=255) aCTCCTGCACCAGTTTCTCGGCGATTTTTTCTGcc > 1:12963806/1‑35 (MQ=255) aCTCCTGCACCAGTTTCTCGGCGATTTTTTCTGcc > 1:1116766/1‑35 (MQ=255) aCTCCTGCACCAGTTTCTCGGCGATTTTTACTGcc > 1:399657/1‑35 (MQ=255) aCTCCTGCACCAGTTTCTCGGCGATTTTTACTGcc > 1:14995669/1‑35 (MQ=255) cTCCTGCACCAGTTTCTCGGCGATTTTTTATGccc > 1:6064351/1‑34 (MQ=25) cTCCTGCACCAGTTTCTCGGCGATTTTTACTGCCa > 1:3045363/1‑35 (MQ=255) tCCTGCACCAGTTTCTCGGCGATTTTTTCTTccct > 1:13046365/1‑33 (MQ=25) tCCTGCACCAGTTTCTCGGCGATTTTTACTGCCAt > 1:9142183/1‑35 (MQ=255) tCCTGCACCAGTTTCTCGGCGAATTTTTCTGccct > 1:8678339/1‑33 (MQ=25) ccTGCACCAGTTTCTCGGCGATTTTTTCTGCCATc > 1:9380240/1‑35 (MQ=255) cTGCACCAGTTTCTCGGCGATTTTTTCTGCCCTcc > 1:5022412/1‑34 (MQ=25) cTGCACCAGTTTCTCGGCGATTTTTTCTGCCACCa > 1:3780116/1‑35 (MQ=25) tGCACCAGTTTCTCGGCGATTTTTACTGCCATCac > 1:2420336/1‑34 (MQ=255) gCACCAGTTTCTCGGCGTTTTTTCCTGCCATCAgc < 1:17819668/35‑1 (MQ=37) aCCAGTTTCTCGGCGATTTTTATTGCCATCAgccc > 1:5192553/1‑33 (MQ=37) ccAGTTTCTCGGCGATTTTTCCTGCCATCAgcgcg < 1:5991289/35‑1 (MQ=255) cattttCTCGGCGATTTTTCCTGCCATCAgcgcgc < 1:9511628/32‑1 (MQ=25) cAGTTTCTCGGCGATTTTTACTGCCATCAgggcgc < 1:751720/35‑1 (MQ=255) aGTTTCTCTGCGATTTTTACTGCCATCAGCGcgcc > 1:11698324/1‑35 (MQ=255) ttCTCGGCGTTTTTTCCTGCCATCAGCGCgccgcc < 1:3303053/35‑1 (MQ=25) ttCCCGGCTTTTTTTCCTGCCATCAGCGCgccgcc < 1:6199115/35‑1 (MQ=12) tctcGGCTTTTTTCCCTGCCATCAGCGCGCCGCCa < 1:1728460/35‑1 (MQ=16) tcccGGCGTTTTTCCCTGCCATCAGCGCGCCGCCa < 1:10191823/32‑1 (MQ=12) gcgggCGTTTTTTCCTGCCATCAGCGCGCCGCCaa < 1:7680882/32‑1 (MQ=21) cgcggcttttttccctgCCATCAGCGCGCCGCCaa < 1:2480669‑M2/18‑1 (MQ=255) ccgggcttttttccctgCCATCAGCGCGCCGCCaa < 1:3328865‑M2/18‑1 (MQ=255) cGGCGATTTTTACTGCCATCAGCGCGCCGCCAAAg > 1:12458918/1‑35 (MQ=255) gggttttttccctgCCATCAGCGCGCCGCCAAAGc < 1:8997447‑M2/21‑1 (MQ=255) ggcttttttccctgCCATCAGCGCGCCGCCAAAGc < 1:5650751‑M2/21‑1 (MQ=255) ggCGATTTTTACTGCCATCAGCGCGCCGCCAAAGc > 1:13870074/1‑35 (MQ=255) ggCGATTTTTACTGCCATCAGCGCGCCGCCAAAGc > 1:4740871/1‑35 (MQ=255) ggCGATTTTTACTGCCATCAGCGCGCCGCCAAAGc > 1:20535590/1‑35 (MQ=255) ggCGATTTTTACTGCCATCAGCGCGCCGCCAAAGc > 1:17496500/1‑35 (MQ=255) ggCGATTTTTACTGCCATCAGCGCGCCGCCAAAGc > 1:12037236/1‑35 (MQ=255) gcttttttccctgCCATCAGCGCGCCGCCAAAGCg < 1:1300602‑M2/22‑1 (MQ=255) gcttttttccctgCCATCAGCGCGCAGCCAAAGCg < 1:13900200‑M2/22‑1 (MQ=255) gCGATTTTTACTGCCATCAGCGCGCCGCCAAAGCg > 1:1396325/1‑35 (MQ=255) gCGATTTTTACTGCCATCAGCGCGCCGCCAAAGCg > 1:9601355/1‑35 (MQ=255) gCGATTTTTACTGCCATCAGCGCGCCGCCAAAGCg > 1:19216139/1‑35 (MQ=255) gCGATTTTTACTGCCATCAGCGCGCCGCCAAAGCg > 1:7053173/1‑35 (MQ=255) cGATTTTTACTGCCATCAGCGCGCCGCCAAAGCGa > 1:14674223/1‑35 (MQ=255) cGATTTTTACTGCCATCAGCGCGCCGCCAAAGCGa > 1:1460482/1‑35 (MQ=255) cGATTTTTACTGCCATCAGCGCGCCGCCAAAGCGa > 1:2725561/1‑35 (MQ=255) gtttttccctgCCATCAGCGCGCCGCCAAAGCGaa < 1:1392205‑M2/24‑1 (MQ=255) gATTTTTACTGCCATCAGCGCGCCGCCAAAGCTaa > 1:11894858/1‑35 (MQ=255) gATTTTTACTGCCATCAGCGCGCCGCCAAAGCGaa > 1:4209133/1‑35 (MQ=255) gATTTTTACTGCCATCAGCGCGCCGCCAAAGCGaa > 1:10824285/1‑35 (MQ=255) gATTTTTACTGCCATCAGCGCGCCGCCAAAGCGaa > 1:788694/1‑35 (MQ=255) gATTTTTACTGCCATCAGCGCGCCGCCAAAGCGaa > 1:18000467/1‑35 (MQ=255) gATTTTTACTGCCATCAGCGCGCCGCCAAAGCGaa > 1:619590/1‑35 (MQ=255) gATATTTACTGCCATCAGCGCGCCGCCAAAGCGaa > 1:2791146/1‑35 (MQ=255) tttttccctgCCATCAGCGCGCCGCCAAAGCGAAc < 1:7328979‑M2/25‑1 (MQ=255) aTTTTTACTGCCATCAGCGCGCCGCCAAAGCGAAc > 1:11291110/1‑35 (MQ=255) aTTTTTACTGCCATCAGCGCGCCGCCAAAGCGAAc > 1:19992716/1‑35 (MQ=255) aTTTTTACTGCCATCAGCGCGCCGCCAAAGCGAAc > 1:2866789/1‑35 (MQ=255) tttttACTGCCATCAGCGCGCCGCCAAAGCGAACg > 1:9798640/1‑35 (MQ=255) ttttccctgCCATCAGCGCGCCGCCAAAGCGAACg < 1:15476900‑M2/26‑1 (MQ=255) ttttccctgCCATCAGCGCGCCGCCAAAGCGAACg < 1:16873137‑M2/26‑1 (MQ=255) ttttccctgCCATCAGCGCGCCGCCAAAGCGAACg < 1:5668091‑M2/26‑1 (MQ=255) ttttACTGCCATCAGCGCGCCGCCAAAGCGAACGt > 1:11403214/1‑35 (MQ=255) ttttACTGCCATCAGCGCGCCGCCAAAGCGAACGt > 1:14465257/1‑35 (MQ=255) tttccctgCCATCAGCGCGCCGCCAAAGCGAACGt < 1:7138812‑M2/27‑1 (MQ=255) tttACTGCCATCAGCGCGCCGCCAAAGCGAACGtt > 1:14843035/1‑35 (MQ=255) tttACTGCCATCAGCGCGCCGCCAAAGCGAACGtt > 1:13604510/1‑35 (MQ=255) tttACTGCCATCAGCGCGCCGCCAAAGCGAACGtt > 1:2464163/1‑35 (MQ=255) ttccctgCCATCAGCGCGCCGCCAAAGCGAACGtt < 1:9634183‑M2/28‑1 (MQ=255) ttccctgCCATCAGCGCGCCGCCAAAGCGAACGtt < 1:3193041‑M2/28‑1 (MQ=255) tctcctgCCATCAGCGCGCCGCCAAAGCGAACGtt < 1:17616630‑M2/28‑1 (MQ=255) ttACTGCCATCAGCGCGCCGCCAAAGCGAACGTTa > 1:8509933/1‑35 (MQ=255) ttACTGCCATCAGCGCGCCGCCAAAGCGAACGTTa > 1:19195845/1‑35 (MQ=255) ttACTGCCATCAGCGCGCCGCCAAAGCGAACGTTa > 1:16669113/1‑35 (MQ=255) accctgCCATCAGCGCGCCGCCAAAGCGAACGTTa < 1:11081078‑M2/29‑1 (MQ=255) tcctgCCATCAGCGCGCCGCCAAAGCGAACGTTAt < 1:8408564‑M2/30‑1 (MQ=255) tACTGCCATCAGCGCGCCGCCAAAGCGAACGTTAt > 1:19277116/1‑35 (MQ=255) cctgCCATCAGCGCGCCGCCAAAGCGAACGTTATc < 1:11349244‑M2/31‑1 (MQ=255) cctgCCATCAGCGCGCCGCCAAAGCGAACGTTATc < 1:8993298‑M2/31‑1 (MQ=255) aCTGCCATCAGCGCGCCGCCAAAGCGAACGTTATc > 1:7670843/1‑35 (MQ=255) aCTGCCATCAGCGCGCCGCCAAAGCGAACGTTATc > 1:7053733/1‑35 (MQ=255) aCTGCCATCAGCGCGCCGCCAAAGCGAACGTTATc > 1:14243954/1‑35 (MQ=255) aCTGCCATCAGCGCGCCGCCAAAGCGAACGTTATc > 1:17914639/1‑35 (MQ=255) ctgCCATCAGCGCGCCGCCAAAGCGAACGTTATCg < 1:13931828‑M2/32‑1 (MQ=255) ctgCCATCAGCGCGCCGCCAAAGCGAACGTTATCg < 1:3037976‑M2/32‑1 (MQ=255) ctgCCATCAGCGCGCCGCCAAAGCGAACGTTATCg > 1:14095834‑M2/4‑35 (MQ=255) tgCCATCAGCGCGCTGCCAAAGCGAACGTTATCgg > 1:16245478‑M2/3‑35 (MQ=255) tgCCATCAGCGCGCCGCCAAAGCGAACGTTATCgg > 1:9024228‑M2/3‑35 (MQ=255) tgCCATCAGCGCGCCGCCAAAGCGAACGTTATCgg < 1:15609270‑M2/33‑1 (MQ=255) tgCCATCAGCGCGCCGCCAAAGCGAACGTTATCgg > 1:3229861‑M2/3‑35 (MQ=255) tgCCATCAGCGCGCCGCCAAAGCGAACGTTATCgg < 1:741783‑M2/33‑1 (MQ=255) tgCCATCAGCGCGCCGCCAAAGCGAACGTTATCgg < 1:1375175‑M2/33‑1 (MQ=255) tgCCATCAGCGCGCCGCCAAAGCGAACGTTATCgg < 1:18630399‑M2/33‑1 (MQ=255) tgCCACCAGCGCGCCGCCAAAGCGAACGTTATCgg < 1:20603326‑M2/33‑1 (MQ=255) gCCATCAGCGCGCCGCCAAAGCGAACGTTATCGGc > 1:3704523‑M2/2‑35 (MQ=255) gCCATCAGCGCGCCGCCAAAGCGAACGTTATCGGc > 1:11999660‑M2/2‑35 (MQ=255) gCCATCAGCGCGCCGCCAAAGCGAACGTTATCGGc < 1:4353121‑M2/34‑1 (MQ=255) ccATCAGCGCGCCGCCAAAGCGAACGTTATCgggc > 1:13668262/1‑33 (MQ=255) ccATCAGCGCGCCGCCAAAGCGAACGTTATCGGcc > 1:5828362/1‑35 (MQ=255) ccATCAGCGCGCCGCCAAAGCGAACGTTATCGGcc < 1:4202887/35‑1 (MQ=255) ccATCAGCGCGCCGCCAAAGCGAACGTTATCGGcc > 1:9733673/1‑35 (MQ=255) | TACTCCTGCACCAGTTTCTCGGCGATTTTTACTGCCATCAGCGCGCCGCCAAAGCGAACGTTATCGGCC > REL606/2379238‑2379306 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |