New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2318764 = | 63 (0.610) | 11 (0.140) | 4/36 | NT | 13.6% | coding (1344/1653 nt) | arnT | 4‑amino‑4‑deoxy‑L‑arabinose transferase |
? | REL606 | 4219145 = | 92 (1.190) | intergenic (+483/‑112) | yjbH/yjbA | predicted porin/phosphate‑starvation‑inducible protein PsiE |
Only 100 of 153 total aligned reads displayed.
TTTTTGTCGAGATGACACAAGAATCACTTCAGCCAAGCCGCTATATTCTTACTGATAGCGTCGGTGTTG > REL606/2318730‑2318798 | tttttGTCGAGATGACACAAGAATCACTTCAGCCa > 1:16209887/1‑35 (MQ=255) tttttGTCGAGATGACACAAGAATCACTTCAGCCa < 1:6786815/35‑1 (MQ=255) ttgttcaacctggatttggagcgcgcctccaccaa < 1:20340048‑M1/1‑1 (MQ=255) tgttcaacctggatttggagcgcgcctccaccaaa > 1:18797539‑M1/34‑35 (MQ=255) tgttcaacctggatttggagcgcgcctccaccaaa < 1:7367159‑M1/2‑1 (MQ=255) tgttcaacctggatttggagcgcgcctccaccaaa < 1:9891494‑M1/2‑1 (MQ=255) tttGTCGAGATGACACAAGAATCCCTTCAGCCAAg > 1:6530793/1‑35 (MQ=255) tttGTCGAGATGACACAAGAATCACTTCAGCCAAg > 1:3469767/1‑35 (MQ=255) tttGTCGAGATGACACAAGAATCACTTCAGCCAAg > 1:8219724/1‑35 (MQ=255) tttGTCGAGATGACACAAGAATCACTTCAGCCAAg > 1:1831995/1‑35 (MQ=255) gttcaacctggatttggagcgcgcctccaccaAAg < 1:15381503‑M1/3‑1 (MQ=255) gttcaacctggatttggagcgcgcctccaccaAAg < 1:8679085‑M1/3‑1 (MQ=255) gttcaacctggatttggagcgcgcctccaccaAAg > 1:3182935‑M1/33‑35 (MQ=255) gttcaacctggatttggagcgcgcctccaccaAAg < 1:10494037‑M1/3‑1 (MQ=255) ttcaacctggatttggagcgcgcctccaccaAAGc > 1:951614‑M1/32‑35 (MQ=255) ttcaacctggatttggagcgcgcctccaccaAAGc > 1:12878662‑M1/32‑35 (MQ=255) ttcaacctggatttggagcgcgcctccaccaAAGc > 1:19189763‑M1/32‑35 (MQ=255) ttGTGGAGATGACACAAGAATCACTTCAGCCAAGc > 1:1788504/1‑35 (MQ=255) ttGTCGAGATGACACAAGAATCACTTCTGCCAAGc > 1:18287581/1‑35 (MQ=255) ttGTCGAGATGACACAAGAATCACTTCAGCCAAGc > 1:17705743/1‑35 (MQ=255) ttGTCGAGATGACACAAGAATCACTTCAGCCAAGc < 1:6992137/35‑1 (MQ=255) ttGTCGAGATGACACAAGAATCACTTCAGCCAAGc > 1:8287355/1‑35 (MQ=255) ttGTCGAGATGACACAAGAATCACTTCAGCCAAGc > 1:2235815/1‑35 (MQ=255) tcaacctggatttggagcgcgcctccaccaAAGcc < 1:20158730‑M1/5‑1 (MQ=255) tcaacctggatttggagcgcgcctccaccaAAGcc < 1:8894876‑M1/5‑1 (MQ=255) tcaacctggatttggagcgcgcctccaccaAAGcc < 1:9581157‑M1/5‑1 (MQ=255) tcaacctggatttggagcgcgcctccaccaAAGcc < 1:9350687‑M1/5‑1 (MQ=255) tGTCGAGATGACACAAGAATCACTTCAGCCAAGcc > 1:13351766/1‑35 (MQ=255) tGTCGAGATGACACAAGAATCACTTCAGCCAAGcc > 1:7833422/1‑35 (MQ=255) tGTCGAGATGACACAAGAATCACTTCAGCCAAGcc > 1:16152762/1‑35 (MQ=255) tGTCGAGATGACACAAGAATCACTTCAGCCAAGcc > 1:16838384/1‑35 (MQ=255) gTCGAGATGACACAAGAATCACTTCAGCCAAGCCg > 1:18949621/1‑35 (MQ=255) gTCGAGATGACACAAGAATCACTTCAGCCAAGCCg > 1:14976586/1‑35 (MQ=255) gTCGAGATGACACAAGAATCACTTCAGCCAAGCCg > 1:12025459/1‑35 (MQ=255) gTCGAGATGACACAAGAATCACTTCAGCCAAGCCg > 1:5659668/1‑35 (MQ=255) gTCGAGATGACAAAAGAATCACTTCAGCCAAGCCg < 1:10953295/35‑1 (MQ=255) caacctggatttggagcgcgcctccaccaAAGCCg < 1:13522904‑M1/6‑1 (MQ=255) tCGAGATGACACAAGAATCACTTCAGCCAAGCCGc > 1:619536/1‑35 (MQ=255) tCGAGATGACACAACAATCACTTCAGCCAAGCCGc > 1:5797131/1‑35 (MQ=255) cGAGATGACACAAGAATCACTTCAGCCAAGCCGCt > 1:5485844/1‑35 (MQ=255) cGAGATGACACAAGAATCACTTCAGCCAAGCCGCt > 1:10871326/1‑35 (MQ=255) gagaTGACACAAGAATCACTTCAGCCAAGCCGCta > 1:20512301/1‑35 (MQ=255) gagaTGACACAAGAATCACTTCAGCCAAGCCGCta > 1:18462278/1‑35 (MQ=255) gagaTGACACAAGAATCACTTCAGCCAAGCCGCta > 1:11134947/1‑35 (MQ=255) agaTGACACAAGAATCACTTCAGCCAAGCCGCtat > 1:18050058/1‑35 (MQ=255) agaTGACACAAGAATCACTTCAGCCAAGCCGCtat > 1:14905038/1‑35 (MQ=255) gaTGACACAAGAATCACTTCAGCCAAGCCGCtata > 1:13758637/1‑35 (MQ=255) gaTGACACAAGAATCACTTCAGCCAAGCCGCtata > 1:13760029/1‑35 (MQ=255) gaTGACACAAGAATCACTTCAGCCAAGCCGCtata > 1:3949345/1‑35 (MQ=255) aTGACACAAGAATCACTTCAGCCAAGCCGCTatat > 1:12612778/1‑35 (MQ=255) tGACACAAGAATCACTTCAGCCAAGCCGCTATAtt > 1:12421135/1‑35 (MQ=255) tGACACAAGAATCACTTCAGCCAAGCCGCTATAtt > 1:3845766/1‑35 (MQ=255) gACACAAGAATCACTTCAGCCAAGCCGCTATATTc > 1:9590332/1‑35 (MQ=255) acacAAGAATCACTTCAGCCAAGCCGCTATATTCt > 1:3757505/1‑35 (MQ=255) acacAAGAATCACTTCAGCCAAGCCGCTATATTCt > 1:16565563/1‑35 (MQ=255) acacAAGAATCACTTCAGCCAAGCCGCTATATTCt > 1:13129144/1‑35 (MQ=255) cacaAGAATCACTTCAGCCAAGCCGCTATATTCtt > 1:3043611/1‑35 (MQ=255) cacaAGAATCACTTCAGCCAAGCCGCTATATTCtt > 1:14054413/1‑35 (MQ=255) cacaAGAATCACTTCAGCCAAGCCGCTATATTCtt > 1:19386825/1‑35 (MQ=255) cacaAGAATCACTTCAGCCAAGCCGCTATATTCtt > 1:13201963/1‑35 (MQ=255) acaAGAATCACTTCAGCCAAGCCGCTATATTCTTa > 1:4674499/1‑35 (MQ=255) acaAGAATCACTTCAGCCAAGCCGCTATATTCTTa > 1:18623895/1‑35 (MQ=255) aaGAATCACTTCAGCCAAGCCGCTATATTCTTACt > 1:16134671/1‑35 (MQ=255) aaGAATCACTTCAGCCAAGCCGCTATATTCTTACt > 1:47899/1‑35 (MQ=255) aaGAATCACTTCAGCCAAGCCGCTATATTCTTACt > 1:8104511/1‑35 (MQ=255) aaGAATCACTTCAGCCAAGCCGCTATATTCTTACt > 1:12040615/1‑35 (MQ=255) aaGAATCACTTCAGCCAAGCCGCTATATTCTTACt > 1:10300157/1‑35 (MQ=255) gAATCACTTCAGCCAAGCCGCTATATTCTTACTGa > 1:3994097/1‑35 (MQ=255) aaTCACTTCAGCCAAGCCGCTATATTCTTACTGAt > 1:8677736/1‑35 (MQ=255) aaTCACTTCAGCCAAGCCGCTATATTCTTACTGAt > 1:11977255/1‑35 (MQ=255) acccctccaccaAAGCCGCTATATTCTTACTGATa > 1:12463862‑M1/13‑35 (MQ=255) acccctccaccaAAGCCGCTATATTCTTACTGATa > 1:4245181‑M1/13‑35 (MQ=255) aTCCCTCCAGCAAAGCCGCTATATTCTTACTGATa < 1:14540505/35‑1 (MQ=25) aTCACTTCAGCCAAGCCGCTATATTCTTACTGATa > 1:18872252/1‑35 (MQ=255) tCACTTCAGCCAAGCCGCTATATTCTTACTGATAg > 1:9287302/1‑35 (MQ=255) tCACTTCAGCCAAGCCGCTATATTCTTACTGATAg > 1:20529923/1‑35 (MQ=255) cctccaccaAAGCCGCTATATTCTTACTGATAGCg > 1:4439199‑M1/10‑35 (MQ=255) ctcaaccaAAGCCGCTATATTCTTACTGATAGCGt > 1:15591315‑M1/9‑35 (MQ=255) tccagcaAAGCCGCTATATTCTTACTGATAGCGTc > 1:10624947‑M1/8‑35 (MQ=255) tccaccaAAGCCGCTATATTCTTACTGATAGCGTc > 1:4154382‑M1/8‑35 (MQ=255) tccaccaAAGCCGCTATATTCTTACTGATAGCGTc > 1:7292516‑M1/8‑35 (MQ=255) tCAGCCAAGCCGCTATATTCTTACTGATAGCGTCg > 1:7673864/1‑35 (MQ=255) ccaccaAACCCGCTATATTCTTACTGATAGCGTCg > 1:19546542‑M1/7‑35 (MQ=255) cgccaAAGCCGCTATATTCTTACTGATAGCGTCgg > 1:16386803‑M1/6‑35 (MQ=255) caccaAAGCCGCTATATTCTTACTGATAGCGTCgg > 1:13205036‑M1/6‑35 (MQ=255) cAGCCAAGCCGCTATATTCTTACTGATAGCGTCgg > 1:11165982/1‑35 (MQ=255) cAGCAAGGCCGCTATATTCTTACTGATAGCGTCgg < 1:10748903/35‑1 (MQ=38) aGCCAAGCCGCTATATTCTTACTGATAGCGTCggg > 1:9487695/1‑34 (MQ=255) aGCCAAGCCGCTATATTCTTACTGATAGCGTCggg > 1:8788848/1‑34 (MQ=255) gcaAAGCCGCTATATTCTTACTGATAGCGTCGgtg > 1:17069270‑M1/4‑35 (MQ=255) gCCAAGCCGCTATATTCTTACTGATAGCGTCgggg > 1:16960341/1‑33 (MQ=255) gCCAAGCCGCTATATTCTTACTGATAGCGTCgggg > 1:17270397/1‑33 (MQ=255) ccAAGCCGCTATATTCTTACTGATAGCGTCggggg > 1:2916070/1‑32 (MQ=255) caAAGCCGCTATATTCTTACTGATAGCGTCGgtgt > 1:12079732‑M1/3‑35 (MQ=255) caAAGCCGCTATATTCTTACTGATAGCGTCGgtgt > 1:6011958‑M1/3‑35 (MQ=255) aaAAGCCGCTATATTCTTACTGATAGCGTCGctgt > 1:17412991‑M1/3‑35 (MQ=255) aAAGCCGCTATATTCTTACTGATAGCGTCGGTGtt > 1:5433924‑M1/2‑35 (MQ=255) AAGCCGCTATATTCTTACTGATAGCGTCGGTGTTg > 1:19708730‑M1/1‑35 (MQ=255) AAGCCGCTATATTCTTACTGATAGCGTCGGTGTTg > 1:2408775‑M1/1‑35 (MQ=255) AAGCCGCTATATTCTTACTGATAGCGTCGGTGTTg > 1:5983052‑M1/1‑35 (MQ=255) | TTTTTGTCGAGATGACACAAGAATCACTTCAGCCAAGCCGCTATATTCTTACTGATAGCGTCGGTGTTG > REL606/2318730‑2318798 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |