New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1306327 = | 87 (0.850) | 9 (0.140) | 3/30 | NT | 15.9% | intergenic (‑88/+283) | cls/kch | cardiolipin synthetase/voltage‑gated potassium channel |
? | REL606 | = 3884923 | 41 (0.640) | coding (1072/1890 nt) | gidA | glucose‑inhibited division protein A |
Only 100 of 253 total aligned reads displayed.
ATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGCGGGGGTATAATGACCATT > REL606/1306293‑1306357 | ggcgcacatcatacaccaaatgcaccagcctttTc > 1:9517762‑M1/34‑35 (MQ=255) ggcgcacatcatacaccaaatgcaccagcctttTc > 1:9156224‑M1/34‑35 (MQ=255) cagcaaagaacagcccctggataaacttgctctcc < 1:17613835‑M1/1‑1 (MQ=255) cagcaaagaacagcccctggataaacttgctctcc < 1:10053639‑M1/1‑1 (MQ=255) tCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCa < 1:16393630/35‑1 (MQ=255) tCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCa < 1:871400/35‑1 (MQ=255) tCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCa < 1:14398327/35‑1 (MQ=255) tCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCa < 1:5149968/35‑1 (MQ=255) gcgcacatcatacaccaaatgcaccagcctttTCa < 1:20551576‑M1/3‑1 (MQ=255) agcaaagaacagcccctggataaacttgctctcCa < 1:15597200‑M1/2‑1 (MQ=255) cgcacatcatacaccaaatgcaccagcctttTCAg < 1:4476186‑M1/4‑1 (MQ=255) cgcacatcatacaccaaatgcaccagcctttTCAg < 1:10649232‑M1/4‑1 (MQ=255) cTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAg < 1:2183317/35‑1 (MQ=255) tGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGc > 1:19103732/1‑35 (MQ=255) tGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGc < 1:13327805/35‑1 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc < 1:14908225‑M1/5‑1 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc < 1:14483490‑M1/5‑1 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc > 1:19363973‑M1/31‑35 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc > 1:13161140‑M1/31‑35 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc < 1:13010417‑M1/5‑1 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc > 1:12818719‑M1/31‑35 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc > 1:2902803‑M1/31‑35 (MQ=255) caaagaacagcccctggataaacttgctctcCAGc < 1:11525482‑M1/4‑1 (MQ=255) cacatcatacaccaaatgcaccagcctttTCAGCg > 1:7804073‑M1/30‑35 (MQ=255) cacatcatacaccaaatgcaccagcctttTCAGCg < 1:16540506‑M1/6‑1 (MQ=255) aaagcacagcccctggataaacttgctctcCAGCg < 1:5788795‑M1/5‑1 (MQ=255) gCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGt < 1:17766402/35‑1 (MQ=255) gCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGt > 1:7975748/1‑35 (MQ=255) gCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGt > 1:14352045/1‑35 (MQ=255) gCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGt < 1:20129171/35‑1 (MQ=255) acatcatacaccaaatgcaccagcctttTCAGCGt < 1:18615944‑M1/7‑1 (MQ=255) acatcatacaccaaatgcaccagcctttTCAGCGt < 1:9236788‑M1/7‑1 (MQ=255) acatcatacaccaaatgcaccagcctttTCAGCGt < 1:13383587‑M1/7‑1 (MQ=255) acatcatacaccaaatgcaccagcctttTCAGCGt > 1:7286466‑M1/29‑35 (MQ=255) aagaacagcccctggataaacttgctctcCAGCGt < 1:20103935‑M1/6‑1 (MQ=255) aagaacagcccctggataaacttgctctcCAGCGt < 1:11589656‑M1/6‑1 (MQ=255) aagaacagcccctggataaacttgctctcCAGCGt < 1:8205198‑M1/6‑1 (MQ=255) cAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTc > 1:5600474/1‑35 (MQ=255) cAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTc < 1:2653047/35‑1 (MQ=255) agaacagcccctggataaacttgctctcCAGCGTc < 1:4013723‑M1/7‑1 (MQ=255) agaacagcccctggataaacttgctctcCAGCGTc < 1:7032122‑M1/7‑1 (MQ=255) agaacagcccctggataaacttgctctcCAGCGTc < 1:4581970‑M1/7‑1 (MQ=255) gaacagcccctggataaacttgctctcCAGCGTcg < 1:16721411‑M1/8‑1 (MQ=255) ccccagcccctggataaacttgctctcCAGCGTcg > 1:7379626‑M1/28‑35 (MQ=255) atcatacaccaaatgcaccggcctttTCAGCGTcg > 1:163039‑M1/27‑35 (MQ=255) atcatacaccaaatgcaccagcctttTCAGCGTcg < 1:15361005‑M1/9‑1 (MQ=255) aaaTAAAAACGCGGGAAAAGCACTGGTCAGCGTcg < 1:10143958/35‑1 (MQ=255) tcatacaccaaatgcaccagcctttTCAGCGTcgg < 1:11264116‑M1/10‑1 (MQ=255) aacagcccctggataaacttgctctcCAGCgtctg < 1:13900055‑M1/9‑3 (MQ=255) aacagcccctggataaacttgctctcCAGCGTcgg < 1:20286921‑M1/9‑1 (MQ=255) aacagcccctggataaacttgctctcCAGCGTcgg < 1:4270302‑M1/9‑1 (MQ=255) aTAAAAACGCGGGAAAAGCACTGGTCAGCGTcggg < 1:15673268/35‑1 (MQ=255) aTAAAAACGCGGGAAAAGCACTGGTCAGCGTcggg > 1:15910464/1‑35 (MQ=255) aTAAAAACGCGGGAAAAGCACTGGTCAGCGTcggg < 1:17342376/35‑1 (MQ=255) cagcccctggataaacttgctctcCAGCGTcgggg < 1:5924531‑M1/11‑1 (MQ=255) cagcccctggataaacttgctctcCAGCGTcgggg < 1:1820504‑M1/11‑1 (MQ=255) tacaccaaatgcaccagcctttTCAGCGTcggggg < 1:5281915‑M1/13‑1 (MQ=255) agccccttgataaacttgctctcCAGCGTcggggg < 1:10288919‑M1/12‑1 (MQ=255) agcccctggataaacttgctctcCAGCGTcggggg < 1:10780355‑M1/12‑1 (MQ=255) agcccctggataaacctgctctcCAGCGTcggggg < 1:6770817‑M1/12‑1 (MQ=255) agcccctcgataaacttgctctcCAGCGTcggggg < 1:11057782‑M1/12‑1 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggg < 1:8365631/35‑1 (MQ=255) gcccctggataaacttgctctcCAGCGtcgggggg < 1:1986119‑M1/13‑2 (MQ=255) gcccctggataaacttgctctcCAGCGtcgggggg < 1:8172764‑M1/13‑2 (MQ=255) gcccctggataaacttgctctcCAGCGtcgggggg < 1:7062122‑M1/13‑2 (MQ=255) ccctggataaacttgctctcCAGcgtcgggggggg < 1:6541698‑M1/15‑4 (MQ=255) accaaatgcaccagcctttTCAGcgtcgggggggg < 1:17395240‑M1/16‑4 (MQ=255) accaaatgcaccagcctttTCAGcgtcgggggggg < 1:12582524‑M1/16‑4 (MQ=255) aaCGCGGGAAAAGCACTGGTCAGCGTcgggggcgg > 1:5020385/1‑35 (MQ=255) cctggataaacttgctctcCAGCGTcggggggggg < 1:16854373‑M1/16‑1 (MQ=255) cctggataaacttgctctcCAGCGTcggggggggg < 1:482860‑M1/16‑1 (MQ=255) ccaaatgcaccagcctttTCAGCGTcggggggggg < 1:20593097‑M1/17‑1 (MQ=255) ccaaatgcaccagcctttTCAGCGTcggggggggg < 1:5101163‑M1/17‑1 (MQ=255) aCGCGGGAAAAGCACTGGTCAGCGTcgggggcggg < 1:5425988/35‑1 (MQ=255) aCGCGGGAAAAGCACTGGTCAGCGTcgggggcggg < 1:19245348/35‑1 (MQ=255) aCGCGGGAAAAGCACTGGTCAGCGTcgggggcggg > 1:3147209/1‑35 (MQ=255) caaatgcaccagcctttTCAGCGTcgggggggggg < 1:12209947‑M1/18‑1 (MQ=255) tggataaacttgctctcCAGCGTcggggggggggg < 1:6403791‑M1/18‑1 (MQ=255) gcgGGAAAAGCACTGGTCAGCGTcgggggcggggg < 1:18372810/35‑1 (MQ=255) gcgGGAAAAGCACTGGTCAGCGTcgggggcggggg < 1:17996145/35‑1 (MQ=255) ggataaacttgctctcCAGCGtcgggggggggggg < 1:3710290‑M1/19‑2 (MQ=255) aatgcaccagcctttTCAGCGtcgggggggggggg < 1:6320816‑M1/20‑2 (MQ=255) ggAAAAGCACTGGTCAGCGTCGGGGGCGGGGGtat < 1:12937559/35‑1 (MQ=255) ggAAAAGCACTGGTCAGCGTCGGGGGCGGGGGtat < 1:3489578/35‑1 (MQ=255) gAAAAGCACTGGTCAGCGTCGGGGGCGGGGGtata < 1:2007744/35‑1 (MQ=255) gAAAAGCACTGGTCAGCGTCGGGGGCGGGGGtata < 1:19786519/35‑1 (MQ=255) gAAAAGCACTGGTCAGCGTCGGGGGCGGGGGtata < 1:19177848/35‑1 (MQ=255) aaaaGCACTGGTCAGCGTCGGGGGCGGGGGTATaa < 1:10393064/35‑1 (MQ=255) aaaGCACTGGTCAGCGTCGGGGGCGGGGGGATAAt > 1:1448262/1‑35 (MQ=255) aaGCACTGGTCAGCGTCGGGGGCGGGGGTATAATg < 1:8559725/35‑1 (MQ=255) aGCACTGGTCAGCGTCGGGGGCGGGGGTATAATGa < 1:6617072/35‑1 (MQ=255) aGCACTGGTCAGCGTCGGGGGCGGGGGGATAATGa > 1:7546705/1‑35 (MQ=255) gCACTGGTCAGCGTCGGGGGCGGGGGTATAATGAc > 1:14767284/1‑35 (MQ=255) cACTGGTCAGCGTCGGGGGCGGGGGTATAATGAcc < 1:19552105/35‑1 (MQ=255) cACTGGTCAGCGTCGGGGGCGGGGGTATAATGAcc < 1:10975586/35‑1 (MQ=255) aCTGGTCAGCGTCGGGGGCGGGGGTATAATGACCa < 1:1533170/35‑1 (MQ=255) aCTGGTAAGCGTCGGGGGCGGGGGTATAATGACCa < 1:2347257/35‑1 (MQ=255) cTGGTCAGCGTCGGGGGCGGGGGTATAATGACCAt < 1:3566892/35‑1 (MQ=255) cTGGTCAGCGTCGGGGGCGGGGGTATAATGACCAt < 1:15799598/35‑1 (MQ=255) cTGGTCAGCGTCGGGGGCGGGGGTATAATGACCAt > 1:11714167/1‑35 (MQ=255) | ATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGCGGGGGTATAATGACCATT > REL606/1306293‑1306357 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |