Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | REL606 | 3,481,820 | A→G | 100% | T46A (ACC→GCC) | malT → | transcriptional regulator MalT |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 3,481,820 | 0 | A→G | 100.0% | 418.1 | 120 | T46A (ACC→GCC) | malT | transcriptional regulator MalT |
Reads supporting (aligned to +/- strand): new base (53/67): ref base (0/0): total (53/67) |
Only 100 of 142 total aligned reads displayed.
CGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGGGCGGCAGGCAA > REL606/3481788‑3481851 | cgcTGATCACGAGTCCTGCGGGCTACGGAAAGgcc > 1:11777972/1‑35 (MQ=255) cgcTGATCACGAGTCCTGCGGGCTACGGAAAGgcc > 1:7746434/1‑35 (MQ=255) cgcTGATCACGAGTCCTGCGGGCTACGGAAAGgcc > 1:16025985/1‑35 (MQ=255) cgcTGATCACGAGTCCTGCGGGCTACGGAAAGgcc < 1:5312595/35‑1 (MQ=255) gcTGATCACGAGTCCTGCGGGCTACGGAAAGgcca > 1:17520257/1‑35 (MQ=255) gcTGATCACGAGTCCTGCGGGCTACGGAAAGgcca < 1:16552558/35‑1 (MQ=255) gcTGATCACGAGTCCTGCGGGCTACGGAAAGgcca > 1:7694414/1‑35 (MQ=255) gcTGATCACGAGTCCTGCGGGCTACGGAAAGgcca < 1:8922721/35‑1 (MQ=255) gcTGATCACGAGTCCTGCGGGCTACGGAAAGgcca < 1:8905118/35‑1 (MQ=255) cTGATCACGAGTCCTGCGGGCTACGGAAAGgccac < 1:17027782/35‑1 (MQ=255) tGATCACGAGTCCTGCGGGCTACGGAAAGgccacc > 1:2812363/1‑35 (MQ=255) tGATCACGAGTCCTGCGGGCTACGGAAAGgccacc < 1:10913948/35‑1 (MQ=255) gATCACGAGTCCTGCGGGCTACGGAAAGGCCAccc > 1:184491/1‑35 (MQ=255) aTCACGAGTCCTGCTGGCTACGGAAAGGCCACCCt > 1:10439783/1‑35 (MQ=38) aTCACGAGTCCTGCGGGCTACGGAAAGGCCACCCt < 1:14304394/35‑1 (MQ=255) aTCACGAGTCCTGCGGGCTACGGAAAGGCCACCCt < 1:8028997/35‑1 (MQ=255) aTCACGAGTCCTGCGGGCTACGGAAAGGCCACCCt < 1:3870053/35‑1 (MQ=255) aTCACGAGTCCTGCGGGCTACGGAAAGGCCACCCt < 1:2214297/35‑1 (MQ=255) taaCGAGTCCTGCGGGCTACGGAAAGGCCACCCTc < 1:13456077/33‑1 (MQ=255) tCACGAGTCCTGCGGGCTACGGAAAGGCCACCCTc > 1:1574684/1‑35 (MQ=255) tCACGAGTCCTGCGGGCTACGGAAAGGCCACCCTc > 1:4291350/1‑35 (MQ=255) tCACGAGTCCTGCGGGCTACGGAAAGGCCACCCTc < 1:10394356/35‑1 (MQ=255) tCACGAGTCCTGCGGGCTACGGAAAGGCCACCCTc > 1:9089946/1‑35 (MQ=255) cACGAGTCCTGCGGGCTACGGAAAGGCCACCCTCa < 1:1102310/35‑1 (MQ=255) cACGAGTCCTGCGGGCTACGGAAAGGCCACCCTCa > 1:17924474/1‑35 (MQ=255) cACGAGTCCTGCGGGCTACGGAAAGGCCACCCTCa < 1:13116755/35‑1 (MQ=255) cACGAGTCCTGCGGGCTACGGAAAGGCCACCCTCa > 1:2980451/1‑35 (MQ=255) cACGAGTCCTGCGGGCTACGGAAAGGCCACCCTCa > 1:17059033/1‑35 (MQ=255) cACGAGTCCTGCGGGCTACGGAAAGGCCACCCTCa > 1:370913/1‑35 (MQ=255) aCGAGTCCTGCGGGCTACGGAAAGGCCACCCTCAt < 1:19002044/35‑1 (MQ=255) aCGAGTCCTGCGGGCTACGGAAAGGCCACCCTCAt > 1:6879673/1‑35 (MQ=255) aCGAGTCCTGCGGGCTACGGAAAGGCCACCCTCAt < 1:11577407/35‑1 (MQ=255) aCGAGTCCTGCGGGCTACGGAAAGGCCACCATCAt < 1:1244293/35‑1 (MQ=38) cGAGTCCTGCGGGCTACGGAAAGGCCACCCTCAtt < 1:3114963/35‑1 (MQ=255) cGAGTCCTGCGGGCTACGGAAAGGCCACCCTCAtt > 1:15863172/1‑35 (MQ=255) cGAGTCCTGCGGGCTACGGAAAGGCCACCCTCAtt > 1:15776771/1‑35 (MQ=255) cGAGTCCTGCGGGCTACGGAAAGGCCACCCTCAtt > 1:14058968/1‑35 (MQ=255) cGAGTCCTGCGGGCTACGGAAAGGCCACCCTCAtt > 1:1011544/1‑35 (MQ=255) gAGTCCTGCGGGCTACGGAAAGGCCACCCTCAttt > 1:20268468/1‑35 (MQ=255) gAGTCCTGCGGGCTACGGAAAGGCCACCCTCAttt < 1:3636432/35‑1 (MQ=255) gAGTCCTGCGGGCTACGGAAAGGCCACCCTCAttt > 1:3080163/1‑35 (MQ=255) aGTCCTGCGGGCTACGGAAAGGCCACCCTCATTTc < 1:4592586/35‑1 (MQ=255) aGTCCTGCGGGCTACGGAAAGGCCACCCTCATTTc < 1:11489475/35‑1 (MQ=255) aGTCCTGCGGGCTACGGAAAGGCCACCCTCATTTc < 1:863787/35‑1 (MQ=255) aGTCCTGCGGGCTACGGAAAGGCCACCCTCATTTc < 1:18898671/35‑1 (MQ=255) gTCCTGCGGGCTACGGAAAGGCCACCCTCATTTcc > 1:15971514/1‑35 (MQ=255) gTCCTGCGGGCTACGGAAAGGCCACCCTCATTTcc < 1:1990197/35‑1 (MQ=255) gTCCTGCGGGCTACGGAAAGGCCACCCTCATTTcc > 1:5792722/1‑35 (MQ=255) gTCCTGCGGGCTACGGAAAGGCCACCCTCATTTcc > 1:19839690/1‑35 (MQ=255) tCCTGCGGGCTACGTAAAGGCCACCCTCATTTccc > 1:16975348/1‑35 (MQ=38) tCCTGCGGGCTACGGAAAGGCCACCCTCATTTccc > 1:14290652/1‑35 (MQ=255) ccTGCGGGCTACGGAAAGGCCACCCTCATTTCCCa < 1:9631030/35‑1 (MQ=255) ccTGCGGGCTACGGAAAGGCCACCCTCATTTCCCa > 1:8739192/1‑35 (MQ=255) ccTGCGGGCTACGGAAAGGCCACCCTCATTTCCCa < 1:12360183/35‑1 (MQ=255) ccTGCGGGCTACGGAAAGGCCACCCTCATTTCCCa < 1:16165356/35‑1 (MQ=255) cTGCGGGCTACGGAAAGGCCACCCTCATTTCCCAg < 1:6489680/35‑1 (MQ=255) cTGCGGGCTACGGAAAGGCCACCCTCATTTCCCAg > 1:14872612/1‑35 (MQ=255) cTGCGGGCTACGGAAAGGCCACCCTCATTTCCCAg < 1:16290749/35‑1 (MQ=255) cTGCGGGCTACGGAAAGGCCACCCTCATTTCCCAg > 1:3917358/1‑35 (MQ=255) tGCGGGCTACGGAAAGGCCACCCTCATTTCCCAGt < 1:3575538/35‑1 (MQ=255) gCGGGCTACGGAAAGGCCACCCTCATTTCCCAGTg < 1:7109720/35‑1 (MQ=255) cGGGCTACGGAAAGGCCACCCTCATTTCCCAGTgt > 1:2518802/1‑34 (MQ=255) cGGGCTACGGAAAGGCCACCCTCATTTCCCAGTgg > 1:12670265/1‑35 (MQ=255) cGGGCTACGGAAAGGCCACCCTCATTTCCCAGTgg < 1:5567495/35‑1 (MQ=255) gggCTACGGAAAGGCCACCCTCATTTCCCAGTggg > 1:423375/1‑35 (MQ=255) gggCTACGGAAAGGCCACCCTCATTTCCCAGTggg < 1:14733536/35‑1 (MQ=255) ggCTACGGAAAGGCCACCCTCATTTCCCAGTGggc < 1:9082346/35‑1 (MQ=255) ggCTACGGAAAGGCCACCCTCATTTCCCAGTGggc < 1:1271705/35‑1 (MQ=255) ggCTACGGAAAGGCCACCCTCATTTCCCAGTGggc > 1:3785804/1‑35 (MQ=255) ggCTACGGAAAGGCCACCCTCATTTCCCAGTGggc < 1:13006129/35‑1 (MQ=255) ggCTACGGAAAGGCCACCCTCATTTCCCAGTGggc > 1:6294730/1‑35 (MQ=255) ggCTACGGAAAGGCCACCCTCATTTCCCAGTGggc < 1:7240674/35‑1 (MQ=255) gCTACGGAAAGGCCACCCTCATTTCCCAGTGggcg > 1:4487906/1‑35 (MQ=255) gCTACGGAAAGGCCACCCTCATTTCCCAGTGggcg < 1:4963362/35‑1 (MQ=255) gCTACGGAAAGGCCACCCTCATTTCCCAGTGggcg < 1:16596409/35‑1 (MQ=255) cTACGGAAAGGCCACCCTCATTTCCCAGTGggcgg < 1:4797671/35‑1 (MQ=255) cTACGGAAAGGCCACCCTCATTTCCCAGTGggcgg < 1:1365278/35‑1 (MQ=255) cTACGGAAAGGCCACCCTCATTT‑CCAGTGggcggc > 1:68030/1‑35 (MQ=25) tACGGAAAGGCCACCCTCATTTCCCATTGggcggc > 1:3722946/1‑35 (MQ=255) tACGGAAAGGCCACCCTCATTTCCCAGTGggcggc > 1:5303749/1‑35 (MQ=255) tACGGAAAGGCCACCCTCATTTCCAAGTGggcggc < 1:9147898/35‑1 (MQ=255) aCGGAAAGGCCACCCTCATTTCCCAGTGGGCggca > 1:17274958/1‑35 (MQ=255) aCGGAAAGGCCACCCTCATTTCCCAGTGGGCggca > 1:16971911/1‑35 (MQ=255) aCGGAAAGGCCACCCTCATTTCCCAGTGGGCggca < 1:16302415/35‑1 (MQ=255) cGGAAAGGCCACCCTCATTTCCCAGTGGGCggcag < 1:9606639/35‑1 (MQ=255) cGGAAAGGCCACCCTCATTTCCCAGTGGGCggcag > 1:4297029/1‑35 (MQ=255) ggAAAGGCCACCCTCATTTCCCAGTGGGCggcagg < 1:17068385/35‑1 (MQ=255) ggAAAGGCCACCCTCATTTCCCAGTGGGCggcagg < 1:14938330/35‑1 (MQ=255) ggAAAGGCCACCCTCATTTCCCAGTGGGCggcagg < 1:20209543/35‑1 (MQ=255) gAAAGGCCACCCTCATTTCCCAGTGGGCggcaggc < 1:5787635/35‑1 (MQ=255) gAAAGGCCACCCTCATTTCCCAGTGGGCggcaggc < 1:12914598/35‑1 (MQ=255) gAAAGGCCACCCTCATTTCCCAGTGGGCggcaggc < 1:11814481/35‑1 (MQ=255) aaaGGCCACCCTCATTTCCCAGTGGGCggcaggca < 1:1121228/35‑1 (MQ=255) aaaGGCCACCCTCATTTCCCAGTGGGCggcaggca < 1:411203/35‑1 (MQ=255) aaaGGCCACCCTCATTTCCCAGTGGGCggcaggca < 1:8822260/35‑1 (MQ=255) aaaGGCCACCCTCATTTCCCAGTGGGCggcaggca < 1:7754407/35‑1 (MQ=255) aaaGGCCACCCTCATTTCCCAGTAGGCggcaggca < 1:426548/35‑1 (MQ=38) aaGGCCACCCTCATTTCCCAGTGGGCGGCAGGCaa > 1:14720234/1‑35 (MQ=255) aaGGCCACCCTCATTTCCCAGTGGGCGGCAGGCaa < 1:6054261/35‑1 (MQ=255) aaGGCCACCCTCATTTCCCAGTGGGAGGCAGGCaa > 1:17654868/1‑35 (MQ=38) | CGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGGGCGGCAGGCAA > REL606/3481788‑3481851 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |