New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 481061 = | 70 (0.680) | 12 (0.160) | 4/34 | NT | 13.9% | coding (2487/2505 nt) | copA | copper transporter |
? | REL606 | = 606452 | 99 (1.360) | coding (767/957 nt) | fepB | iron‑enterobactin transporter subunit |
Only 100 of 200 total aligned reads displayed.
ACCGGCGAACAGGAATAGCGATTCACCGTTTAACCCCGCAGCCAGATTTTCCCCACCAAGCTGAATGAT > REL606/606418‑606486 | cGGCGAACAGGAATAGCGATTCACCGTTTAACCcc > 1:439003‑M2/1‑33 (MQ=255) ggCGAACAGGAATAGCGATTCACCGTTTAACCccg < 1:2928250‑M2/35‑4 (MQ=255) ggCGAACAGGAATAGCGATTCACCGTTTAACCccg > 1:6537336‑M2/1‑32 (MQ=255) gCGAACAGGAATAGCGATTCACCGTTTAACCccgc < 1:13886599‑M2/35‑5 (MQ=255) gCGAACAGGAATAGCGATTCACCGTTTAACCccgc < 1:6950703‑M2/35‑5 (MQ=255) gCGAACAGGAATAGCGATTCACCGTTTAACCccgc > 1:11195143‑M2/1‑31 (MQ=255) cGAACAGGAATAGCGATTCACCGTTTAACCccgca < 1:150528‑M2/35‑6 (MQ=255) cGAACAGGAATAGCGATTCACCGTTTAACCccgca < 1:17474278‑M2/35‑6 (MQ=255) cGAACAGGAATAGCGATTCACCGTTTAACCccgca > 1:1768374‑M2/1‑30 (MQ=255) cGAACAGGAATAGCGATTCACCGTTTAACCccgca > 1:10652768‑M2/1‑30 (MQ=255) cGAACAGGAATAGCGATTCACCGTTTAACCccgca > 1:10042606‑M2/1‑30 (MQ=255) gAACAGGAATAGCGATTCACCGTTTAACCccgcag < 1:16922913‑M2/35‑7 (MQ=255) gAACAGGAATAGCGATTCACCGTTTAACCccgcag < 1:8313476‑M2/35‑7 (MQ=255) aaCAGGAATAGCGATTCACCGTTTAACCccgcagc > 1:10548571‑M2/1‑28 (MQ=255) aCAGGAATAGCGATTCACCGTTTAACCccgcagtc < 1:17781161‑M2/35‑9 (MQ=255) aCAGGAATAGCGATTCACCGTTTAACCCCGCAGcc < 1:10658366/35‑1 (MQ=255) aCAGGAATAGCGATTCACCGTTTAACCCCGCAGcc > 1:12640437/1‑35 (MQ=255) aCAGGAATAGCGATTCACCGTTTAACCCCGCAGcc < 1:13363434/35‑1 (MQ=255) aCAGGAATAGCGATTCACCGTTTAACCCCGCAGcc > 1:2376821/1‑35 (MQ=255) catgAATAGCGATTCACCGTTTAACCCCGCAGCCa > 1:10086582/4‑35 (MQ=255) cAGGAATAGCGATTCACCGTTTAACCCCGCAGCCa > 1:16679874/1‑35 (MQ=255) cAGGAATAGCGATTCACCGTTTAACCCCGCAGCCa > 1:10159900/1‑35 (MQ=255) cAGGAATAGCGATTCACCGTTTAACCCCGCAGCCa < 1:18114498/35‑1 (MQ=255) cAGGAATAGCGATTCACCGTTTAAACCCGCAGACa < 1:14970579/35‑1 (MQ=38) aGGAATAGCGATTCACCGTTTAACCCCGCAGCCAg < 1:18665483/35‑1 (MQ=255) aGGAATAGCGATTCACCGTTTAACCCCGCAGCCAg < 1:15173785/35‑1 (MQ=255) aGGAATAGCGATTCACCGTTTAACCCCGCAGCCAg < 1:776300/35‑1 (MQ=255) aGGAATAGCGATTCACCGTTTAACCCCGCAGCCAg < 1:15634978/35‑1 (MQ=255) ggAATAGCGATTCACCGTTTAACCCCGCAGCCata > 1:13139065/1‑33 (MQ=255) ggAATAGCGATTCACCGTTTAACCCCGCAGCCAGa > 1:12429607/1‑35 (MQ=255) gAATAGCGATTCACCGTTTAACCCCGCAGCCAGAt > 1:18434032/1‑35 (MQ=255) aaTAGCGATTCACCGTTTAACCCCGCAGCCAGAtt > 1:12967892/1‑35 (MQ=255) aTAGCGATTCACCGTTTAACCCCTCAGCCAGAttt > 1:6249573/1‑35 (MQ=255) tAGCGATTCACCGTTTAACCCCGCAGCCAGAtttt < 1:6064072/35‑1 (MQ=255) tAGCGATTCACCGTTTAACCCCGCAGCCAGAtttt > 1:12329087/1‑35 (MQ=255) tAGCGATTCACCGTTTAACCCCGCAGCCAGAtttt < 1:11872830/35‑1 (MQ=255) aGCGATTCGCCGTTTAACCCCGCAGCCAGATTTTc > 1:7289474/1‑35 (MQ=255) aGCGATTCACCGTTTAACCCCGCAGCCAGATTTTc < 1:5047739/35‑1 (MQ=255) cGATTCACCGTTTAACCCCGCAGCCAGATTTTccc > 1:17916768/1‑35 (MQ=255) cGATTCACCGTTTAACCCCGCAGCCAGATTTTccc > 1:877726/1‑35 (MQ=255) cGATTCACCGTTTAACCCCGCAGCCAGATTTTccc > 1:16203886/1‑35 (MQ=255) cGATTCACCGTTTAACCCCGCAGCCAGATTTTccc < 1:14062221/35‑1 (MQ=255) gATTCACCGTTTAACCCCGCAGCCAGNTTTTcccc < 1:12726888/35‑1 (MQ=255) gATTCACCGTTTAACCCCGCAGCCAGATTTTcccc > 1:19886431/1‑35 (MQ=255) gATGCACCGTTTAACCCCGCAGCCAGATTTTcccc < 1:2611929/35‑1 (MQ=255) aTTCACCGTTTAACCCCGCAGCCAGATTTTCCcca < 1:6407090/35‑1 (MQ=255) aTTCACCGTTTAACCCCGCAGCCAGATTTTCCcca < 1:16581951/35‑1 (MQ=255) aTTCACCGTTTAACCCCGCAGCCAGATTTTCCcca < 1:646686/35‑1 (MQ=255) ttCACCGTTTAACCCCGCAGCCAGATTTTCCccac < 1:6220738/35‑1 (MQ=255) ttCACCGTTTAACCCCGCAGCCAGATTTTCCccac > 1:11568505/1‑35 (MQ=255) ttCACCGTTTAACCCCGCAGCCAGATTTTCCccac > 1:11028165/1‑35 (MQ=255) tCACCGTTTAACCCCGCAGCCAGATTTTCCccacc > 1:13994336/1‑35 (MQ=255) tCACCGTTTAACCCCGCAGCCAGATTTTCCccacc > 1:6472126/1‑35 (MQ=255) tCACCGTTTAACCCCGCAGCCAGATTTTCCccacc < 1:5697841/35‑1 (MQ=255) tCACCGTTTAACCCCGCAGCCAGATTTTCCccaca < 1:13242220/35‑2 (MQ=255) ccccGTTTAACCCCGCAGCCAGATTTTCCccacca < 1:4593668/33‑1 (MQ=255) cccGTTTAACCACGCAGCCAGATTTTCCCCACCaa < 1:113248/34‑1 (MQ=255) aCCGTTTAACCCCGCAGCCAGATTTTCCCCACCaa < 1:19971881/35‑1 (MQ=255) aCCGTTTAACCCCGCAGCCAGATTTTCCCCACCaa < 1:14841560/35‑1 (MQ=255) aCCGTTTAACCCCGCAGCCAGATTTTCCCCACCaa < 1:12829274/35‑1 (MQ=255) aCCGTTTAACCCCGCAGCCAGATTTTCCCCACCaa < 1:3467576/35‑1 (MQ=255) ccGTTTAACCCCGCAGCCAGATTTTCCCCACCAAg < 1:12031627/35‑1 (MQ=255) ccGTTTAACCCCGCAGCCAGATTTTCCCCACCAAg > 1:15749128/1‑35 (MQ=255) cGTTTAACCccgcagcaaccggttggcgttactca > 1:3637635‑M2/1‑9 (MQ=255) cGTTTAACCCCGCAGCCAGATTTTCCCCACCAAGc > 1:6732929/1‑35 (MQ=255) cGTTTAACCCCGCAGCCAGATTTTCCCCACCAAGc < 1:8868454/35‑1 (MQ=255) gTTTAACCccgcagcaaccggttggcgttactcac > 1:10324344‑M2/1‑8 (MQ=255) gTTTAACCCCGCAGCCAGATTTTCCCCACCAAGCt < 1:952072/35‑1 (MQ=255) gTTTAACCCCGCAGCCAGATTTTCCCCACCAAGCt < 1:4000603/35‑1 (MQ=255) gTTTAACCCCGCAGCCAGATTTTCCCCACCAAGCt < 1:13453905/35‑1 (MQ=255) tttAACCccgcagcaaccggttggcgttactcact > 1:14190448‑M2/1‑7 (MQ=255) tttAACCccgcagcaaccggttggcgttactcact > 1:5860934‑M2/1‑7 (MQ=255) tttAACCCCGCAGCCAGATTTTCCCCACCAAGCTg < 1:18768371/35‑1 (MQ=255) tttAACCCCGCAGCCAGATTTTCCCCACCAAGCTg < 1:19035124/35‑1 (MQ=255) ttaAACCccgcagcaaccggttggcgttactcact > 1:16887233‑M2/1‑7 (MQ=255) gttaAACccgcagcaaccggttggcgttactcact > 1:8164462‑M2/2‑7 (MQ=255) ttAACCCCGCAGCCAGATTTTCCCCACCAAGCTGa < 1:14405473/35‑1 (MQ=255) ttAACCCCGCAGCCAGATTTTCCCCACCAAGCTGa > 1:3873551/1‑35 (MQ=255) ttAAACccgcagcaaccggttggcgttactcacta > 1:1360440‑M2/1‑6 (MQ=255) tacccccGCAGCCAGATTTTCCCCACCAAGCTGaa < 1:109178/32‑1 (MQ=255) tAACCCCGCAGCCAGATTTTCCCCACCAAGCTGaa > 1:14909679/1‑35 (MQ=255) tAACCCCGCAGCCAGATTTTCCCCACCAAGCTGaa < 1:20401158/35‑1 (MQ=255) tAACCCCGCAGCCAGATTTTCCCCACCAAGCTGaa < 1:5099308/35‑1 (MQ=255) tAACCCCGCAGCCAGATTTTCCCCACCAAGCTGaa < 1:7674670/35‑1 (MQ=255) tAACCCCGCAGCCAGATTTTCCCCACCAAGCTGaa < 1:6939335/35‑1 (MQ=255) tAAACccgcagcaaccggttggcgttactcactac > 1:3958296‑M2/1‑5 (MQ=255) tAAACccgcagcaaccggttggcgttactcactac > 1:4258879‑M2/1‑5 (MQ=255) aaACccgcagcaaccggttggcgttactcactacg > 1:8507465‑M2/1‑4 (MQ=255) aaACccgcagcaaccggttggcgttactcactacg > 1:5323323‑M2/1‑4 (MQ=255) aCCCCGCAGCCAGATTTTCCCCACCGAGCTGAatg > 1:18243076/1‑35 (MQ=255) aCCCCGCAGCCAGATTTTCCCCACCAAGCTGAatt > 1:8025559/1‑34 (MQ=255) aCCCCGCAGCCAGATTTTCCCCACCAAGCTGAatg < 1:3532823/35‑1 (MQ=255) aCCCCGCAGCCAGATTTTCCCCACCAAGCTGAatg > 1:13337256/1‑35 (MQ=255) aCCCCGCAGCCAGATTTTCCCCACCAAGCTGAatg > 1:1925679/1‑35 (MQ=255) ccccgcagcaaccggttggcgttactcactacggt > 1:2802724‑M2/1‑2 (MQ=255) ccccGCAGCCAGATTTTCCCCACCAAGCTGAatga < 1:1040046/35‑1 (MQ=255) ccccGCAGCCAGATTTTCCCCACCAAGCTGAatga > 1:19086640/1‑35 (MQ=255) cccgcagcaaccggttggcgttactcactacggta > 1:12790336‑M2/1‑1 (MQ=255) cccGCAGCCAGATTTTCCCCACCAAGCTGAatgat < 1:13679506/35‑1 (MQ=255) cccGCAGCCAGATTTTCCCCACCAAGCTGAatgat > 1:16323163/1‑35 (MQ=255) | ACCGGCGAACAGGAATAGCGATTCACCGTTTAACCCCGCAGCCAGATTTTCCCCACCAAGCTGAATGAT > REL606/606418‑606486 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |