New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 875814 = | 63 (0.610) | 19 (0.220) | 5/40 | NT | 23.4% | coding (127/597 nt) | ybjG | undecaprenyl pyrophosphate phosphatase |
? | REL606 | = 3285418 | 72 (0.840) | coding (277/654 nt) | yhbL | isoprenoid biosynthesis protein with amidotransferase‑like domain |
Only 100 of 149 total aligned reads displayed.
AAATTGCTTAAATTCTTCGCCGCGCCAAACCCCCCCGGCACAATCAACGCATCCAGTTCAGCGGCATCG > REL606/3285384‑3285452 | aaTTGCTTAAATTCTTCGCCGCGCCAAACCCCCCc < 1:4694345‑M2/35‑2 (MQ=255) aaTTGCTTAAATTCTTCGCCGCGCCAAACCCCCCc > 1:10988355‑M2/1‑34 (MQ=255) aTTGCTTAAATTCTTCGCCGCGCCAAACCCCCCcg < 1:7164230‑M2/35‑3 (MQ=255) aTTGCTTAAATTCTTCGCCGCGCCAAACCCCCCcg < 1:5363426‑M2/35‑3 (MQ=255) aTTGCTTAAATTCTTCGCCGCGCCAAACCCCCCcg > 1:18066657‑M2/1‑33 (MQ=255) ttGCTTAAATTCTTCGCCGCGCCAAACCCCCCcgg < 1:2216517‑M2/35‑4 (MQ=255) ttGCTTAAATTCTTCGCCGCGCCAAACCCCACcgg > 1:7615931‑M2/1‑32 (MQ=255) tGCTTAAATTCTTCGCCGCGCCAAACCCCCCcggc < 1:3122640‑M2/35‑5 (MQ=255) tGCTTAAATTCTTCGCCGCGCCAAACCCCCCcggc < 1:10737366‑M2/35‑5 (MQ=255) tGCTTAAATTCTTCGCCGCGCCAAACCCCCCcggc < 1:15067253‑M2/35‑5 (MQ=255) tGCTTAAATTCTTCGCCGCGCCAAACCCCCCcggc < 1:11895661‑M2/35‑5 (MQ=255) tGCTTAAATTCTTCGCCGCGACAAACCCCCCcggc > 1:14664523‑M2/1‑31 (MQ=255) gCTTAAATTCTTCGCCGCGCCAAACCCCCCCGGca < 1:692619/35‑1 (MQ=255) gCTTAAATTCTTCGCCGCGCCAAACCCCCCCGGca > 1:1094461/1‑35 (MQ=255) cTTAAATTCTTCGCCGCGCCAAACCCCCCCGGcac < 1:15252493/35‑1 (MQ=255) cTTAAATTCTTCGCCGCGCCAAACCCCCCCGGcac < 1:13116697/35‑1 (MQ=255) cTTAAATTCTTCGCCGCGCCAAACCCCCCCGGcac > 1:11009178/1‑35 (MQ=255) ttAAATTCTTCGCCGCGCCAAACCCCCCCGGcaca < 1:14837007/35‑1 (MQ=255) ttAAATTCTTCGCCGCGCCAAACCCCCCCGGcaca < 1:18211445/35‑1 (MQ=255) tAAATTCTTCGCCGCGCCAAACCCCCCCGGCACaa < 1:9133224/35‑1 (MQ=255) aaaTTCTTCGCCGCGCCAAACCCCCCCGGCACAAt < 1:6184026/35‑1 (MQ=255) aaaTTCTTCGCCGCGCCAAACCCCCCCGGCACAAt < 1:19127497/35‑1 (MQ=255) aTTCTTCGCCGCGCCAAACCCCCCCGGCACAATCa > 1:17378618/1‑35 (MQ=255) aTTCTTCGCCGCGCCAAACCCCCCCGGCACAATCa > 1:470793/1‑35 (MQ=255) aTTCTTCGCCGCGCCAAACCCCCCCGGCACAATCa < 1:19844240/35‑1 (MQ=255) ttcttcGCCGCGCCAAACCCCCCCGGCACAATCaa < 1:691553/35‑1 (MQ=255) tcttcGCCGCGCCAAACCCCCCCTGCACAATCAAc > 1:11350894/1‑35 (MQ=255) tcttcGCCGCGCCAAACCCCCCCGGCACAATCAAc > 1:20234836/1‑35 (MQ=255) tcttcGCCGCGCCAAACCCCCCCGGCACAATCAAc < 1:14429547/35‑1 (MQ=255) tcttcGCCGCGCCAAACCCCCCCGGCACAATCAAc > 1:7543674/1‑35 (MQ=255) tcttcGCCGCGCCAAACCCCCCCGGCACAATCAAc < 1:1822133/35‑1 (MQ=255) tcttcGCCGCGCCAAACCCCCCCGGCACAATCAAc < 1:20068928/35‑1 (MQ=255) cttcGCCGCGCAAACCCCCCCCGTCACAATCAACg < 1:19265406/35‑1 (MQ=25) ttcGCCGCGCCAAACCCCCCCGGCACAATCAACGc > 1:18557344/1‑35 (MQ=255) ttcGCCGCGCCAAACCCCCCCGGCACAATCAACGc > 1:8955079/1‑35 (MQ=255) ttcGCCGCGCCAAACCCCCCCGGCACAATCAACGc > 1:15963905/1‑35 (MQ=255) ttcGCCGCGCCAAACCCCCCCGGCACAATCAACGc < 1:15257295/35‑1 (MQ=255) cgccgcGCCAAACCCCCCCGGCACAATCAACGCAt < 1:7419883/35‑1 (MQ=255) gccgcGCCAAACCCCCCCGGCACAATCAACGCATc < 1:19068475/35‑1 (MQ=255) ccgcGCCAAACCCCCCCGGCACAATCAACGCATcc > 1:7345985/1‑35 (MQ=255) ccgcGCCAAACCCCCCCGGCACAATCAACGCATcc < 1:9915241/35‑1 (MQ=255) ccgcGCCAAACCCCCCCGGCACAATCAACGCATcc < 1:11796913/35‑1 (MQ=255) ccgcGCCAAACCCCCCCGGCACAATCAACGCATcc > 1:11571291/1‑35 (MQ=255) ccgcGCCAAACCCCCCCGGCACAATCAACGCATcc < 1:8141955/35‑1 (MQ=255) ccgaGCCAAACCCCCCCGGCACAATCAACGCATcc < 1:19296014/35‑1 (MQ=255) cgcgCCAAACCCCCCCGGCACAATCAACGCATCCa > 1:12608143/1‑35 (MQ=255) gcgcCAAACCCCCCCGGCACAATCAACGCATCCAg < 1:5813564/35‑1 (MQ=255) gcgcCAAACCCCCCCGGCACAATCAACGCATCCAg < 1:12751001/35‑1 (MQ=255) ccaccaaaCCCCCCcggccagcaacggcaccacgg > 1:15312708‑M2/4‑14 (MQ=255) cgcCAAACCCCCCCGGCACAATCAACGCATCCAGt > 1:18542799/1‑35 (MQ=255) cgcCAAACCCCCCCGGCACAATCAACGCATCCAGt > 1:3409301/1‑35 (MQ=255) cgcCAAACCCCCCCGGCACAATCAACGCATCCAGt > 1:4116386/1‑35 (MQ=255) gcCAAACCCCCCCGGCACAATCAACGCATCCAGtt > 1:10298830/1‑35 (MQ=255) gcCAAACCCCCCCGGCACAATCAACGCATCCAGtt < 1:17521996/35‑1 (MQ=255) gcCAAACCCCCCCGGCACAATCAACGCATCCAGtt > 1:12086909/1‑35 (MQ=255) gcCAAACCCCCCCGGCACAATCAACGCATCCAGtt > 1:1534679/1‑35 (MQ=255) ccAACCCCCCCCGGCACAATCAACGCATCCAGTTc < 1:13985431/35‑1 (MQ=255) ccAAACCCCCCCGGCACAATCAACGCATCCAGTTc > 1:1135822/1‑35 (MQ=255) ccAAACCCCCCCGGCACAATCAACGCATCCAGTTc > 1:12662739/1‑35 (MQ=255) ccAAACCCCCCCGGCACAATCAACGCATCCAGTTc > 1:264379/1‑35 (MQ=255) nAAACCCCCCcggccagcaacggcaccacggtaat > 1:9942611‑M2/1‑10 (MQ=255) cAAACCCCCCcggccagcaacggcaccacggtaat > 1:9442202‑M2/1‑10 (MQ=255) cAAACCCCCCCGGCACAATCAACGCATCCAGTTCa > 1:8646877/1‑35 (MQ=255) cAAACCCCCCCGGCACAATCAACGCATCCAGTTCa > 1:6197055/1‑35 (MQ=255) aaaacCCCCCcggccagcaacggcaccacggtaat > 1:18119420‑M2/2‑10 (MQ=255) aagCCCCCCcggccagcaacggcaccacggtaatc > 1:2347548‑M2/1‑9 (MQ=255) aagCCCCCCcggccagcaacggcaccacggtaatc > 1:13597295‑M2/1‑9 (MQ=255) aaccccccccGGCACAATCAACGCATCCAGTTCAg < 1:18540848/32‑1 (MQ=255) aaaCCCCCCcggccagcaacggcaccacggtaatc > 1:14925027‑M2/1‑9 (MQ=255) aaaCCCCCCCGGCACAATCAACGCATCCAGTTCAg > 1:8905042/1‑35 (MQ=255) aaaCCCCCCCGGCACAATCAACGCATCCAGTTCAg > 1:7173355/1‑35 (MQ=255) aaaCCCCCCCGGCACAATCAACGCATCCAGTTCAg < 1:11654166/35‑1 (MQ=255) aaaCCCCCCCGGCACAATCAACGCATCCAGTTCAg > 1:5030592/1‑35 (MQ=255) aaaCACCCCCGGCACAATCAACGCATCCAGTTCAg < 1:13242424/35‑1 (MQ=255) aaGCCCCCcggccagcaacggcaccacggtaatca > 1:9494065‑M2/1‑8 (MQ=255) aaCCCCCCcggccagcaacggcaccacggtaatca > 1:7997012‑M2/1‑8 (MQ=255) aaCCCCCCCGGCACAATCAACGCATCCAGTTCAGc > 1:15137429/1‑35 (MQ=255) aaCCCCCCCGGCACAATCAACGCATCCAGTTCAGc < 1:13932692/35‑1 (MQ=255) aCCCCCCcggccagcaacggcaccacggtaatcaa > 1:8949098‑M2/1‑7 (MQ=255) aCCCCCCcggccagcaacggcaccacggtaatcaa > 1:4140564‑M2/1‑7 (MQ=255) aCCCCCCCGGCACAATCAACGCATCCAGTTCAGct > 1:16545802/1‑34 (MQ=255) tccccccggccagcaacggcaccacggtaatcaaa > 1:17674200‑M2/2‑6 (MQ=255) cccccccggccagcaacggcaccacggtaatcaaa > 1:11815992‑M2/1‑6 (MQ=255) cccccccggccagcaacggcaccacggtaatcaaa > 1:2777538‑M2/1‑6 (MQ=255) cccccccggccagcaacggcaccacggtaatcaaa > 1:20455775‑M2/1‑6 (MQ=255) cccccccggccagcaacggcaccacggtaatcaaa > 1:13750854‑M2/1‑6 (MQ=255) cccccccGGCACAATCAACGCATCCAGTTCAGCgg > 1:17622731/1‑35 (MQ=255) cccccccGGCACAATCAACGCATCCAGTTCAGCgg > 1:20576312/1‑35 (MQ=255) ccccccggccagcaacggcaccacggtaatcaaat > 1:5820602‑M2/1‑5 (MQ=255) ccccccggccagcaacggcaccacggtaatcaaat > 1:12745906‑M2/1‑5 (MQ=255) ccccccggccagcaacggcaccacggtaatcaaat > 1:4932315‑M2/1‑5 (MQ=255) cccccggccagcaacggcaccacggtaatcaaatc > 1:8574143‑M2/1‑4 (MQ=255) cccccggccagcaacggcaccacggtaatcaaatc > 1:15772664‑M2/1‑4 (MQ=255) cccccGGCACAATCAACGCATCCAGTTCAGCGGCa > 1:10449583/1‑35 (MQ=255) ccccGGCACAATCAACGCATCCAGTTCAGCGGCAt < 1:14148155/35‑1 (MQ=255) ccccGGCACAATCAACGCATCCAGTTCAGCGGCAt > 1:481178/1‑35 (MQ=255) cccggccagcaacggcaccacggtaataaaatctt > 1:14217126‑M2/1‑2 (MQ=255) cccGGCACAATCAACGCATCCAGTTCAGCGGCATc > 1:20109918/1‑35 (MQ=255) cccGGCACAATCAACGCATCCAGTTCAGCGGCATc > 1:10200390/1‑35 (MQ=255) ccggccagcaacggcaccacggtaatcaaatcttt > 1:16400411‑M2/1‑1 (MQ=255) | AAATTGCTTAAATTCTTCGCCGCGCCAAACCCCCCCGGCACAATCAACGCATCCAGTTCAGCGGCATCG > REL606/3285384‑3285452 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |