New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3826321 = | 43 (0.420) | 5 (0.060) | 3/42 | NT | 9.5% | coding (314/1662 nt) | yidE | hypothetical protein |
? | REL606 | = 3885956 | 58 (0.650) | coding (39/1890 nt) | gidA | glucose‑inhibited division protein A |
TCAACCTGTTTGCTGTTCTGATCGTCATCATCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3826357‑3826321 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggCGGGGGTCATGCAGGCACCGAGGCCGCGATGGCC < REL606/3885956‑3885923 TCAACCTGTTTGCTGTTCTGATCGTCATCATCGGT < 1:9934113/35‑1 TCAACCTGTTTGCTGTTCTGATCGTCATCATCGGT < 1:9328598/35‑1 TCAACCTGTTTGCTGTTCTGATCGTCATCATCGGT < 1:8595129/35‑1 TCAACCTGTTTGCTGTTCTGATCGTCATCATCGGT < 1:5518899/35‑1 TCAACCTGTTTGCTGTTCTGATCGTCATCATCGGT > 1:5213930/1‑35 TCAACCTGTTTGCTGTTCTGATCGTCATCATCGGT > 1:4102631/1‑35 TCAACCTGTTTGCTGTTCTGATCGTCATCATCGGT < 1:10459885/35‑1 CAACCTGTTTGCTTTTCTGATCGTCATCATCGGTG > 1:3170720/1‑35 CAACCTGTTTGCTGTTCTGATCGTCATCATCGGTG < 1:9354781/35‑1 CAACCTGTTTGCTGTTCTGATCGTCATCATCGGTG > 1:13794474/1‑35 CAACCTGTTTGCTGTTCTGATCGTCATCATCGGTG < 1:2127150/35‑1 AACCTGTTTGCTGTTCTGATCGTCATCATCGGTGG < 1:19494423/35‑1 ACCTGTTTGCTGTTCTGATCGTCATCATCGGTGGg > 1:14881051/1‑34 CCTGTTTGCTGTTCTGATCGTCATCATCGGTGGgg > 1:7139689/1‑33 CTGTTTGCTGTTCTGATCGTCATCATCGGTGGGGG > 1:11309648/1‑35 CTGTTTGCTGTTCTGATCGTCATCATCGGTGGGGG > 1:6782207/1‑35 CTGTTTGCTGTTCTGATCGTCATCATCGGTGGGGG > 1:2400438/1‑35 CTGTTTGCTGTTCTGATCGTCATCATCGGTGGGGG > 1:19525106/1‑35 TGTTTGCTGTTCTGATCGTCATCATCGGTGGGGGG > 1:19357248/1‑35 GTTTGCTGTTCTGATCGTCATCATCGGTGGGGGGG > 1:18638028/1‑35 TTTGCTGTTCTGATCGTCATCATCGGTGGGGGGGG > 1:13702779/1‑35 TTTGCTGTTCTGATCGTCATCATCGGTGGGGGGGG > 1:12042794/1‑35 TTGCTGTTCTGATCGTCATCATCGGTGGGGGGGGg > 1:752571/1‑34 TTGCTGTTCTGATCGTCATCATCGGTGGGGGGGGT > 1:7376010/1‑35 TGCTGTTCTGATCGTCATCATCGGTGGGGGGGGTC > 1:7885463/1‑35 TGGCGGGGGTCATGCATGCACCGAGGCCGCGATGG > 1:19313459/1‑35 TGGCGGGGGTCATGCAGGCACCGAGGCCGCGCTGG > 1:16688094/1‑35 TGGCGGGGGTCATGCAGGCACCGAGGCCGCGATGG < 1:14863452/35‑1 TGGCGGGGGTCATGCAGGCACCGAGGCCGCGAAGG > 1:5020117/1‑35 GGCGGGGGTCATGCAGGCACCGAGGCCGCGATGGC > 1:4368942/1‑35 GCGGGGGTCATGCCGGCACCGAGGCCGCGATGGCC > 1:39411/1‑35 GCGGGGGTCATGCAGGCACCGAGGCCGCGATGGCC < 1:8733523/35‑1 TCAACCTGTTTGCTGTTCTGATCGTCATCATCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3826357‑3826321 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggCGGGGGTCATGCAGGCACCGAGGCCGCGATGGCC < REL606/3885956‑3885923 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |