Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 1,776,434 | IS150 (–) +4 bp | 56.9% | intergenic (‑225/+56) | pheS ← / ← pheM | phenylalanyl‑tRNA synthetase alpha subunit/phenylalanyl‑tRNA synthetase operon leader peptide |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1776434 = | 33 (0.390) | 48 (0.470) | 28/48 | NT | 54.8% | intergenic (‑225/+59) | pheS/pheM | phenylalanyl‑tRNA synthetase alpha subunit/phenylalanyl‑tRNA synthetase operon leader peptide |
? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 1776437 | 33 (0.390) | 39 (0.380) | 21/48 | NT | 49.6% | intergenic (‑228/+56) | pheS/pheM | phenylalanyl‑tRNA synthetase alpha subunit/phenylalanyl‑tRNA synthetase operon leader peptide |
? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 158 total aligned reads displayed.
TTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTTCTCTT > REL606/1776403‑1776470 | ttttCAAAACGCGCATACAAAAAAAGCCTCCACTg > 1:15794263/1‑35 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaACTg > 1:13709553‑M1/32‑35 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaACTg > 1:3946520‑M1/32‑35 (MQ=255) tttCAAAACGCGCATACAAAAAAAGCCTCCACTgg > 1:5413099/1‑35 (MQ=255) ttCAAAACGCGCATACAAAAAAAGCCTCCACTGtg > 1:17360307‑M1/1‑33 (MQ=255) ttCAAAACGCGCATACAAAAAAAGCCTCCACTGtg > 1:4959412‑M1/1‑33 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaACTggg > 1:3613682‑M1/30‑35 (MQ=255) catcgtccaacaaaatgggtgcagtacaACTGGGa < 1:15477130‑M1/7‑1 (MQ=255) cAAAACGCGCATACAAAAAAAGCCTCCACTGGGAg > 1:11900143/1‑35 (MQ=255) aaaaaCGCGAATAAAAAAAAAGCCTCCACTGGGAg < 1:7533124/34‑1 (MQ=37) tcgtccaacaaaatgggtgcagtacaACTGGGAgg < 1:3966370‑M1/9‑1 (MQ=255) tcgtccaacaaaatgggtgcagtacaACTGGGAgg > 1:4284606‑M1/27‑35 (MQ=255) tcgtccaacaaaatgggtgcagtacaACTGGGAgg < 1:9345312‑M1/9‑1 (MQ=255) aaaaCGCGCATACAAAAAAAGCCTCCACTGtgtac > 1:16680911‑M1/1‑30 (MQ=255) cgtccaacaaaatgggtgcagtacaACTGGGAGGc < 1:19418512‑M1/10‑1 (MQ=255) cgtccaacaaaatgggtgcagtacaACTGGGAGGc < 1:10999161‑M1/10‑1 (MQ=255) cgtccaacaaaatgggtgcagtacaACTGGGAGGc < 1:18670360‑M1/10‑1 (MQ=255) aaaCGCGCATACAAAAAAAGCCTCCACTGtgtact > 1:12805942‑M1/1‑29 (MQ=255) gtccaacaaaatgggtgcagtacaACTGGGAGGCt > 1:11854333‑M1/25‑35 (MQ=255) aaCGCGCATAAAAAAAAAGCCTCCACTGGGAGGCt < 1:19148808/35‑1 (MQ=255) tccaacaaaatgggtgcagtacaACTGGGAGGCtt > 1:20212648‑M1/24‑35 (MQ=255) tccaacaaaatgggtgcagtacaACTGGGAGGCtt < 1:913584‑M1/12‑1 (MQ=255) tccaacaaaatgggtgcagtacaACTGGGAGGCtt < 1:12015480‑M1/12‑1 (MQ=255) tccaacaaaatgggtgcagtacaACTGGGAGGCtt > 1:11142578‑M1/24‑35 (MQ=255) aCGCGCATACAAAAAAAGCCTCCACTGtgtactga > 1:3738545‑M1/1‑27 (MQ=255) aCGCGCATACAAAAAAAGCCTCCACTGtgtactga > 1:20390632‑M1/1‑27 (MQ=255) aCGCGCATACAAAAAAAGCCTCCACTGTGAGGCtt > 1:10846752/1‑35 (MQ=255) aCGCGCATACAAAAAAAGCCTCCACTGGGAGGCtt > 1:5701132/1‑35 (MQ=255) aCGCGCATACAAAAAAAGCCTCCACTGGGAGGCtt > 1:6742500/1‑35 (MQ=255) aCGCGCATACAAAAAAAGCCTCCACTGGGAGGCtt < 1:10509108/35‑1 (MQ=255) cgcgCATACAAAAAAAGCCTCCACTGtgtactgac > 1:103449‑M1/1‑26 (MQ=255) cgcgCATACAAAAAAAGCCTCCACTGGGAGGTttt > 1:1888215/1‑35 (MQ=255) cgcgCATACAAAAAAAGCCTCCACTGGGAGGCttt > 1:10835179/1‑35 (MQ=255) gcgcATACAAAAAAAGCCTCCACTGtgtactgacc > 1:14164902‑M1/1‑25 (MQ=255) gcgcATACAAAAAAAGCCTCCACTGGGATGCTTTc > 1:14562155/1‑35 (MQ=255) caacaaaatgggtgcagtacaACTGGTAGGCTTTc < 1:3100739‑M1/14‑1 (MQ=255) caacaaaatgggtgcagtacaACTGGGAGGCTTTc > 1:5409188‑M1/22‑35 (MQ=255) cgcATACAAAAAAAGCCTCCACTGtgtactgaccc > 1:19073783‑M1/1‑24 (MQ=255) aacaaaatgggtgcagtacaACTGGGAGGCTTTCa > 1:2040510‑M1/21‑35 (MQ=255) aacaaaatgggtgcagtacaACTGGGAGGCTTTCa < 1:1546505‑M1/15‑1 (MQ=255) aacaaaatgggtgcagtacaACTGGGAGGCTTTCa > 1:7639501‑M1/21‑35 (MQ=255) gcATACAAAAAAAGCCTCCACTGtgtactgacccc > 1:16001335‑M1/1‑23 (MQ=255) acaaaatgggtgcagtacaACTGGGAGGCTTTCAg > 1:6182024‑M1/20‑35 (MQ=255) caaaatgggtgcagtacaACTGGGAGGCTTTCAgg < 1:16379508‑M1/17‑1 (MQ=255) aaaatgggtgcagtacaACTGGGAGGCTTTCAGgc > 1:9690188‑M1/18‑35 (MQ=255) aaaatgggtgcagtacaACTGGGAGGCTTTCAGgc < 1:12949700‑M1/18‑1 (MQ=255) aTACAAAAAAAGCCTCCACTGGGAGGCTTTCAGgc > 1:17777704/1‑35 (MQ=255) aaatgggtgcagtacaACTGGGAGGCTTTCAGgcg > 1:468877‑M1/17‑35 (MQ=255) aaatgggtgcagtacaACTGGGAGGCTTTCAGgcg < 1:16843045‑M1/19‑1 (MQ=255) aaaaaaaaagcCTCCACTGtgtactgaccccaaaa < 1:10568634‑M1/33‑17 (MQ=255) cAAAAAAGGCCTCCACTGGGAGGCTTTCAGGCGCt < 1:2664069/35‑1 (MQ=255) atgggtgcagtacaACTGGGAGGCTTTCAGGCGCt < 1:8819443‑M1/21‑1 (MQ=255) atgggtgcagtacaACTGGGAGGCTTTCAGGCGCt > 1:9109227‑M1/15‑35 (MQ=255) aaaaaaaacCCTCCACTGtgtactgaccccaaaaa < 1:17696431‑M1/34‑18 (MQ=255) aaaaaaaaGCCTCCACTGGGAGGCTTTCAGGCGCt < 1:16865649/34‑1 (MQ=255) aaaaaaaGCCTCCACTGtgtactgaccccaaaaag > 1:8259866‑M1/1‑17 (MQ=255) aaaaaaaGCCTCCACTGGGAGGCTTTCAGGCGCTg > 1:3019978/1‑35 (MQ=255) aaaaaaaGCCTCCACTGGGAGGCTTTCAGGCGCTg > 1:20190152/1‑35 (MQ=255) gggtgcagtacaACTGGGAGGCTTTCAGGCGCTGt > 1:7125492‑M1/13‑35 (MQ=255) aaaaaaGCCTCCACTGtgtactgaccccaaaaagt > 1:14045052‑M1/1‑16 (MQ=255) aaaaaaGCCTCCACTGGGAGGCTTTCAGGCGCTgg > 1:13355779/1‑34 (MQ=255) ggtgcagtacaACTGGGAGGCTTTCAGGCGctggg < 1:8014551‑M1/24‑3 (MQ=255) ggtgcagtacaACTGGGAGGCTTTCAGGCGCTGtt > 1:5921708‑M1/12‑35 (MQ=255) gtgcagtacaACTGGGAGGCTTTCAGGCgctggtt < 1:11451836‑M1/25‑4 (MQ=255) gtgcagtacaACTGGGAGGCTTTCAGGCGCTGttt > 1:659176‑M1/11‑35 (MQ=255) gtgcagtacaACTGGGAGGCTTTCAGGCGCTGttt > 1:10104064‑M1/11‑35 (MQ=255) aaaaGCCTCCACTGtgtactgaccccaaaaagttg > 1:14929060‑M1/1‑14 (MQ=255) aaaaGCCTCCACTGGGAGGCTTTCAGGCGCTgggt > 1:12667259/1‑32 (MQ=255) aaaaGCCTCCACTGGGAGGCTTTCAGGCGCTGgtt > 1:11619698/1‑35 (MQ=255) aaaaGCCTCCACTGGGAGGCTTTCAGGCGCTGgtt > 1:12052765/1‑35 (MQ=255) aaaaGCCTCCACTGGGAGGCTTTCAGGCGCTGgtt > 1:16247834/1‑35 (MQ=255) taaGCCTCCACTGGGAGGCTTTCAGGCGCTGtttt < 1:2669619/34‑1 (MQ=255) aaaGCCTCCACTGGGAGGCTTTCAGGCGCTGtttt < 1:15135389/35‑1 (MQ=255) aaaGCCTCCACTGGGAGGCTTTCAGGCGCTGgttt > 1:2236632/1‑35 (MQ=255) gcagtacaACTGGGAGGCTTTCAGGCGCTGTTTTc > 1:20014316‑M1/9‑35 (MQ=255) aaGCCTCCACTGtgtactgaccccaaaaagttgga > 1:6397845‑M1/1‑12 (MQ=255) aaGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTc < 1:3400118/35‑1 (MQ=255) aGCCTCAACTGtgtactgaccccaaaaagttggac < 1:5899527‑M1/35‑25 (MQ=255) nnctcNNCTGtgtactgaccccaaaaagttggaca < 1:17347595‑M1/33‑26 (MQ=255) ccTCCACTGtgtactgaccccaaaaagttggacag < 1:13429188‑M1/35‑27 (MQ=255) actCCACTGtgtactgaccccaaaaagttggacag < 1:15208444‑M1/34‑27 (MQ=255) tacaACTGGGAGGCTTTCAGGCGCTGTTTTCCGtt > 1:1008219‑M1/5‑35 (MQ=255) ccccacTGtgtactgaccccaaaaagttggacagt > 1:9347595‑M1/3‑8 (MQ=255) cTCCACTGtgtactgaccccaaaaagttggacagt < 1:13448566‑M1/35‑28 (MQ=255) cTCCACTGGGATGCTTTCAGGCGCTGTGTTACgct > 1:11268854/1‑33 (MQ=21) cTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGtn < 1:16648650/35‑1 (MQ=255) tCCACTGtgtactgaccccaaaaagttggacagtt < 1:10346386‑M1/35‑29 (MQ=255) acaaCTGGGAGGCTTTCAGGCGCTGGTTTTCGttt > 1:10721552/4‑35 (MQ=25) caACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTtc > 1:7770015‑M1/3‑35 (MQ=255) aaCTGGGAGGCTTTCAGGCGCTGGTTTTCGttttt > 1:7975076/2‑33 (MQ=25) cttGGGAGGCTTTCAGGCGCTGTTTTCCGTttctc < 1:19787998/33‑1 (MQ=255) aCTGGGAGGCTTTCAGGCGCTGTTTTCCGTttctc < 1:8300879/35‑1 (MQ=255) aCTGGGAGGCTTTCAGGCGCTGTTTTCCGTttctc < 1:5783290/35‑1 (MQ=255) aCTGGGAGGCTTTCAGGCGCTGGTTTTCGTttttc > 1:14627776/1‑35 (MQ=25) cTGGGAGGCTTTCAGGCGCTGTTTTCCGTttctct < 1:19328133/35‑1 (MQ=255) cTGGGAGGCTTTCAGGCGCTGTTTTCCGTttctct < 1:19597912/35‑1 (MQ=255) cTGGGAGGCTTTCAGGCGCTGGTTTTCGTttttct > 1:13267706/1‑35 (MQ=25) tGGGAGGCTTTCAGGCGCTGTTTTCCGTttctctt < 1:18283944/35‑1 (MQ=255) tGGGAGGCTTTCAGGCGCTGTTTTCCGTttctctt < 1:1731910/35‑1 (MQ=255) tGGGAGGCTTTCAGGCGCTGGTTTTCGTttctctt > 1:16383569/1‑35 (MQ=37) | TTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTTCTCTT > REL606/1776403‑1776470 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |