New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 185846047 (0.460)4 (0.050) 4/40 NT 6.2% intergenic (+227/+239) insL‑4/yeaS putative transposase insL for insertion sequence IS186/neutral amino‑acid efflux system
?REL606 = 4005717 82 (0.960)intergenic (+18/+265) fre/fadA NAD(P)H‑flavin reductase/acetyl‑CoA acetyltransferase

Only 100 of 147 total aligned reads displayed.

CGTTTGCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAAACTTT  >  REL606/4005683‑4005751
                                  |                                  
cGTTTGCATTTATCTGAGATATAAAAAAACCCGcc                                    <  1:18659021/35‑1 (MQ=255)
cGTTTGCATTTATCTGAGATATAAAAAAACCCGcc                                    >  1:18431419/1‑35 (MQ=255)
cGTTTGCATTTATCTGAGATATAAAAAAACCCGcc                                    >  1:10733924/1‑35 (MQ=255)
cGTTTGCATTTATATGAGATATAAAAAAGCCCGcc                                    <  1:905497/35‑1 (MQ=37)
 gTTTGCATTTATCTGTGATATAAAAAAACCCGCCc                                   <  1:3809844‑M2/35‑2 (MQ=255)
 gTTTGCATTTATCTGAGATATAAAAAAACCCTCCc                                   <  1:19926013‑M2/35‑2 (MQ=255)
 gTTTGCATTTATCTGAGATATAAAAAAACCCGCCc                                   <  1:14188472‑M2/35‑2 (MQ=255)
 gTTTGCATTTATCTGAGATATAAAAAAACCCGCCc                                   <  1:16859067‑M2/35‑2 (MQ=255)
 gTTTGCATTTATCTGAGATATAAAAAAACCCGCCc                                   <  1:460271‑M2/35‑2 (MQ=255)
 gTTTGCATTTATCTGAGATATAAAAAAACCCGCCc                                   >  1:377462‑M2/1‑34 (MQ=255)
  tttGCATTTATCTGAGATATAAAAAAACCCGCCcc                                  <  1:1078738‑M2/35‑3 (MQ=255)
  tttGCATTTATCTGAGATATAAAAAAACCCGCCcc                                  <  1:6153528‑M2/35‑3 (MQ=255)
  tttGCATTTATCTGAGATATAAAAAAACCCGCCcc                                  <  1:10027135‑M2/35‑3 (MQ=255)
   ttGCATTTATCTGAGATATAAAAAACCCCGCCcct                                 >  1:10420658‑M2/1‑32 (MQ=255)
   ttGCATTTATCTGAGATATAAAAAAACCCGCCcct                                 <  1:13930057‑M2/35‑4 (MQ=255)
   ttGCATTTATCTGAGATATAAAAAAACCCGCCcct                                 <  1:8801755‑M2/35‑4 (MQ=255)
   ttGCATTTATCTGAGATATAAAAAAACCCGCCcct                                 <  1:7857009‑M2/35‑4 (MQ=255)
    tGCATTTATCTGAGATATAAAAAACCCCGCCcctg                                >  1:18181900‑M2/1‑31 (MQ=255)
    tGCATTTATCTGAGATATAAAAAAACCCGCCcctg                                <  1:707714‑M2/35‑5 (MQ=255)
    tGCATTTATCTGAGATATAAAAAAACCCGCCcctg                                <  1:19322201‑M2/35‑5 (MQ=255)
    tGCATTTATCTGAGATATAAAAAAACCCGCCcctg                                <  1:2842485‑M2/35‑5 (MQ=255)
    tGCATTTATCTGAGATATAAAAAAACCCGCCcctg                                <  1:19665124‑M2/35‑5 (MQ=255)
    tGCATTTATCTGAGATATAAAAAAACCCGCCcctg                                <  1:10686218‑M2/35‑5 (MQ=255)
     gCATTTATCTGAGATATAAAAAAACCCGCCCCTGa                               >  1:6595189/1‑35 (MQ=255)
     gCATTTATCTGAGATATAAAAAAACCCGCCCCTGa                               >  1:1511425/1‑35 (MQ=255)
     gCATTTATCTGAGATATAAAAAAACCCGCCCCTGa                               >  1:11387328/1‑35 (MQ=255)
       aTTTATCTGAGATATAAAAAAACCCGCCCCTGACa                             >  1:13755077/1‑35 (MQ=255)
        tttATCTGAGATATAAAAAACCCCGCCCCTGACAg                            <  1:13138681/35‑1 (MQ=255)
        tttATCTGAGATATAAAAAAACCCGCCCCTGACAg                            >  1:1174737/1‑35 (MQ=255)
        tttATCTGAGATATAAAAAAACCCGCCCCTGACAg                            >  1:17371223/1‑35 (MQ=255)
        tttATCTGAGATATAAAAAAACCCGCCCCTGACAg                            >  1:7610960/1‑35 (MQ=255)
          tATCTGAGATATAAAAAACCCCGCCCCTGACAGGc                          <  1:19731289/35‑1 (MQ=255)
          tATCTGAGATATAAAAAAACCCGCCCCTGACAGGc                          >  1:11940240/1‑35 (MQ=255)
          tATCTGAGATATAAAAAAACCCGCCCCTGACAGGc                          >  1:12889926/1‑35 (MQ=255)
          tATCTGAAATAAAAAAAACCCCGCCCCTGACAGGc                          <  1:16761715/35‑1 (MQ=21)
           aTCTGAGATATAAAAAACCCCGCCCCTGACAGGCg                         <  1:19009610/35‑1 (MQ=255)
           aTCTGAGATATAAAAAAACCCGCCCCTGACAGGCg                         >  1:2161949/1‑35 (MQ=255)
           aTCTGAGATAAAAAAAACCCCGCCCCTGACAGGCg                         <  1:13440885/35‑1 (MQ=25)
            tCTGAGATATAAAAAAACCCGCCCCTGACAGGCgg                        >  1:2900241/1‑35 (MQ=255)
            tCTGAGATATAAAAAAACCCGCCCCTGACAGGCgg                        >  1:1013071/1‑35 (MQ=255)
             cTGAGATATAAAAAAACCCGCCCCTGACAGGCggg                       >  1:11517315/1‑35 (MQ=255)
             cTGAGATATAAAAAAACCCGCCCCTGACAGGCggg                       >  1:2257372/1‑35 (MQ=255)
               gagaTATAAAAAAACCCGCCCCTGACAGGCgggga                     >  1:15327563/1‑33 (MQ=255)
               gagaTATAAAAAAACCCGCCCCTGACAGGCgggga                     >  1:18348631/1‑33 (MQ=255)
               gagaTATAAAAAAACCCGCCCCTGACAGGCGGgaa                     >  1:15835963/1‑35 (MQ=255)
               gagaTATAAAAAAACCCGCCCCTGACAGGCGGgaa                     >  1:14373752/1‑35 (MQ=255)
               gagaTATAAAAAACCCGCCCCTGACAGGCGGgaag                    >  1:920355/1‑35 (MQ=37)
               gagaTAAAAAAAACCCCGCCCCTGACAGGCGGgaa                     <  1:6150603/35‑1 (MQ=25)
                agaTATAAAAAAACCCGCCCCTGACAGGCTGgaag                    >  1:15220610/1‑35 (MQ=255)
                agaTATAAAAAAACCCGCCCCTGACAGGCGGggag                    >  1:7749201/1‑35 (MQ=255)
                agaTATAAAAAAACCCGCCCCTGACAGGCGGggag                    >  1:805136/1‑35 (MQ=255)
                agaTATAAAAAAACCCGCCCCTGACAGGCGGggag                    >  1:1399663/1‑35 (MQ=255)
                agaTATAAAAAAACCCGCCCCTGACAGGCGGgaag                    >  1:15299479/1‑35 (MQ=255)
                agaTATAAAAAAACCCGCCCCTGACAGGCGGgaag                    >  1:4603761/1‑35 (MQ=255)
                 tataaAAAAACCCCCGCCCCTGACAGGCGGgaaga                   <  1:2585525/34‑1 (MQ=25)
                 gaTATAAAAAAACCCGCCCCTGACAGGCGGgaaga                   >  1:15604145/1‑35 (MQ=255)
                 gaTATAAAAAAACCCGCCCCTGACAGGCGGgaaga                   >  1:10557322/1‑35 (MQ=255)
                  atatAAAAAAACCCGCCCCTGACAGGCGGgaagaa                  >  1:14912224/1‑35 (MQ=255)
                  atatAAAAAAACCCGCCCCTGACAGGCGGgaagaa                  >  1:14979622/1‑35 (MQ=255)
                  atatAAAAAAACCCGCCCCTGACAGGCGGgaagaa                  >  1:17707846/1‑35 (MQ=255)
                  atatAAAAAAACCCGCCCCTGACAGGCGGgaagaa                  >  1:15640144/1‑35 (MQ=255)
                     taAAAAAACCCGCCCCTGACAGGCGGGGCGAAccg               >  1:3313919/1‑33 (MQ=25)
                     taAAAAAACCCACCCCTGACATGCGGGAAGAACgg               >  1:12760808/1‑35 (MQ=38)
                     aaaaaaacCCCGCCCCTGACAGGCGGGAAGAACgg               <  1:13646869/34‑1 (MQ=255)
                     aaaaaaacCCCGCCCCTGACAGGCGGGAAGAACgg               <  1:1758360/34‑1 (MQ=255)
                     aaaaaaacCCCGCCCCTGACAGGCGGGAAGAACgg               <  1:15922468/34‑1 (MQ=255)
                      aaaaaccCCCGCCCCTGACAGGCGGGAAGAACGGc              <  1:17877370/35‑1 (MQ=37)
                      aaaaaacCCCGCCcctgccggcatattcgaacgtc              >  1:3654293‑M2/1‑13 (MQ=255)
                      aaaaaacCCCGCCCCTGACAGGCGGGAAGAACGGc              <  1:12849335/35‑1 (MQ=255)
                      aaaaaacCCCGCCCCTGACAGGCGGGAAGAACGGc              <  1:7022301/35‑1 (MQ=255)
                       aaaaaaCCCGCCCCTGACAGGCGGGGAGAACGGCa             >  1:9279343/1‑35 (MQ=255)
                       aaaaaaCCCGCCCCTGACAGGCGGGAAGAACGGCa             >  1:687166/1‑35 (MQ=255)
                       aaaaaaCCCGCCCCTGACAGGCGGGAAGAAAGGCa             >  1:18215473/1‑35 (MQ=255)
                        aaaacCCCGCCCCTGACAGGCGGGAAGAACGGCaa            <  1:17128340/35‑1 (MQ=255)
                        aaaaaCCCGCCCCTGACAGGCGGGGAGAACGGCaa            >  1:4295374/1‑35 (MQ=255)
                         aaaaCCCGCCCCTGACAGGCGGGGAGGACCGGAAc           >  1:16441545/1‑35 (MQ=19)
                         aaaaCCCGCCCCTGACAGGCGGGAAGAACGGCAAc           >  1:12696191/1‑35 (MQ=255)
                          aaccccGCCCCTGACAGGCGGGAAGAAAGGCAACt          <  1:16279416/32‑1 (MQ=37)
                           aaCCCGCCCCTGACAGGCTGGGAGAACGGCAAATa         >  1:3629413/1‑35 (MQ=25)
                           aaCCCGCCCCTGACAGGCGGGAAGAACGGCAAATa         >  1:6742290/1‑35 (MQ=255)
                           aaCCCGCCCCTGACAGGCGGGAAGAACGGCAAATa         >  1:5308083/1‑35 (MQ=255)
                            aCCCGCCCCTGACAGGCGGGGAGAACGGCAACTaa        >  1:5199058/1‑35 (MQ=255)
                            aCCCGCCCCTGACAGGCGGGAAGAACGGCAACTaa        >  1:12934117/1‑35 (MQ=255)
                            aCCCCCCcctgccggcatattcgaacgtcatcttg        >  1:16525653‑M2/1‑7 (MQ=255)
                             cccCCCCCTGACAGGCGGGAAGAACGGCAACTaaa       <  1:7154807/35‑1 (MQ=255)
                              ccGCCCCTGACAGGCGGGAAGAACGGCAACTaaaa      >  1:315194/1‑35 (MQ=255)
                               cccccctgccggcatattcgaacgtcatcttgata     >  1:1807498‑M2/3‑4 (MQ=255)
                               cccccctgccggcatattcgaacgtcatcttgata     >  1:15109733‑M2/3‑4 (MQ=255)
                               cGCCCCTGACATGCGGGAAGAACGGCAACTAAAAc     >  1:19343059/1‑35 (MQ=255)
                                gCCCCTGACAGGCGGGAAGAACGGCAACTaaaaat    >  1:13402568/1‑33 (MQ=255)
                                gCCCCTGACAGGCGGGAAGAACGGCAACTAAAACt    >  1:4063913/1‑35 (MQ=255)
                                 cccctgccggcatattcgaacgtcatcttgataaa   >  1:10199156‑M2/1‑2 (MQ=255)
                                 ccccTGACAGGCGGGAAGAACGGCAAATAAAAAtt   >  1:2299866/1‑35 (MQ=25)
                                 cccaTGCCAGGCGGGAAGAACGGCAACTAAAACtt   <  1:15810829/35‑1 (MQ=37)
                                  ccctgccggcatattcgaacgtcatcttgataaag  >  1:6065362‑M2/1‑1 (MQ=255)
                                  ccctgccggcatattcgaacgtcatcttgataaag  >  1:20111443‑M2/1‑1 (MQ=255)
                                  ccctgccggcatattcgaacgtcatcttgataaag  >  1:13105805‑M2/1‑1 (MQ=255)
                                  ccctgccggcatattcgaacgtcatcttgataaag  >  1:11634500‑M2/1‑1 (MQ=255)
                                  cccTGACAGGCGGGGAGAACGGCAAATAAAACttt  >  1:20570809/1‑35 (MQ=25)
                                  cccTGACAGGCGGGAAGACCGGCAACTAAAACttt  <  1:18138219/35‑1 (MQ=255)
                                  |                                  
CGTTTGCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAAACTTT  >  REL606/4005683‑4005751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.