New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2204224 | 68 (0.660) | 16 (0.200) | 4/38 | NT | 14.9% | coding (1109/1251 nt) | yeiJ | predicted nucleoside transporter |
? | REL606 | 2724133 = | 129 (1.590) | coding (227/774 nt) | srlR | DNA‑bindng transcriptional repressor |
GGTGTGGCGCAACCGCAGAAAACGCCCCCACCACCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2204186‑2204224 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG > REL606/2724133‑2724166 GGTGTGGCGCAACCGCAGAAAACGCCCCCACCACC > 1:6901935/1‑35 GGTGTGGCGCAACCGCAGAAAACGCCCCCACCACC > 1:2155768/1‑35 GTGTGGCGCAACCGCAGAAAACGCCCCCACCACCA > 1:7004777/1‑35 TGTGGCGCAACCGCAGAAAACGCCCCCACCACCAC > 1:5890068/1‑35 GTGGCGCAACCGCAGAAAACGCCCCCACCACCACC > 1:7017178/1‑35 GTGGCGCAACCGCAGAAAACGCCCCCACCACCACC > 1:5227076/1‑35 TGGCGCAACCGCAGAAAACGCCCCCACCACCACCC > 1:3440910/1‑35 aCCCCCACCACCACCCACAAGAAAGAGCTGATTGC < 1:14498591/34‑1 CCCCCATCACCACCCACAAGAAAGAGCTGATTGCA < 1:17548681/35‑1 CCCCCACCACCACCCACAAGAAAGAGCTGATTGCA < 1:2331614/35‑1 CCCCCACCACCACCCACAAGAAAGAGCTGATTGCA < 1:11728803/35‑1 cctCACCACCACCCACAAGAAAGAGCTGATTGCAG < 1:14357180/32‑1 CCCCAACACCACCCACAAGAAAGAGCTGATTGCAG < 1:9642691/35‑1 ctCACCACCACCCACAAGAAAGAGCTGATTGCAGA < 1:13369916/33‑1 CCCATCACCACCCACAAGAAAGAGCTGATTGCAGA < 1:3447136/35‑1 CCCACCACCACCCACAAGAAAGAGCTGATTGCAGA < 1:13584371/35‑1 CCCACCACCACCCACAAGAAAGAGCTGATTGCAGA < 1:3695243/35‑1 tCACCACCACCCACAAGAAAGGGCTGATTGCAGAA < 1:18460529/34‑1 tCACCACCACCCACAAGAAAGAGCTGATTGCAGAA < 1:11993047/34‑1 tCACCACCACCCACAAGAAAGAGCTGATTGCAGAA < 1:1740997/34‑1 CCACCACCACCCACAAGAAAGAGCTGATTGCAGAA < 1:12108993/35‑1 CCACCACCACCCACAAGAAAGAGCTGATTGCAGAA < 1:6544750/35‑1 CCACCACCACCCACAAGAAAGAGCTGATTGCAGAA < 1:1120109/35‑1 catCACCACCCACAAGAAAGAGCTGATTGCAGAAG < 1:10436221/32‑1 catCACCACCCACAAGAAAGAGCTGATTGCAGAAG < 1:8542538/32‑1 acaACCACCCACAAGAAAGAGCTGATTGCAGAAGC < 1:3756991/32‑1 aaCACCACCCACAAGAAAGAGCTGATTGCAGAAGC < 1:11242965/33‑1 ACCACCACCCACAAGAAAGAGCTGATTGCAGAAGC < 1:16371269/35‑1 ACCACCACCCACAAGAAAGAGCTGATTGCAGAAGC < 1:11538749/35‑1 ACCACCACCCACAAGAAAGAGCTGATTGCAGAAGC < 1:5664325/35‑1 ACCACCACCCACAAGAAAGAGCTGATTGCAGAAGC < 1:4316565/35‑1 tCACCACCCACAAGAAAGAGCTGATTGCAGAAGCT < 1:10118614/34‑1 cccCCACCCACAAGAAAGAGCTGATTGCAGAAGCT < 1:15432459/32‑1 aCACCACCCACAAGAAAGAGCTGATTGCAGAAGCT < 1:19724864/34‑1 aCACCACCCACAAGAAAGAGCTGATTGCAGAAGCT < 1:1620751/34‑1 CCACCGCCCACAAGAAAGAGCTGATTGCAGAAGCT < 1:16485849/35‑1 CCACCACCCACAAGAAAGAGCTGATTGCAGAAGCT < 1:4913352/35‑1 CCACCACCCACAAGAAAGAGCTGATTGCAGAAGCT < 1:12977909/35‑1 ccCCACCCACAAGAAAGAGCTGATTGCAGAAGCTG < 1:7554545/33‑1 CACCACCCACAAGAAAGAGCTGATTGCAGAAGCTG < 1:5060007/35‑1 CACCACCCACAAGAAAGAGCTGATTGCAGAAGCTG < 1:12295169/35‑1 CACCACCCACAAGAAAGAGCTGATTGCAGAAGCTG < 1:6664720/35‑1 CACCACCCACAAGAAAGAGCTGATTGCAGAAGCTG < 1:7390228/35‑1 CACCACCCACAAGAAAGAGCTGATTGAAGAAGCTG < 1:17951218/35‑1 cCCAACCACAAGAAAGAGCTGATTGCAGAAGCTGC < 1:3407889/34‑1 ACCGCCCACAAGAAAGAGCTGATTGCAGAAGCTGC < 1:3608933/35‑1 ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC < 1:1148497/35‑1 ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC < 1:7156724/35‑1 ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC < 1:18071998/35‑1 ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC < 1:17400263/35‑1 ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC < 1:9317735/35‑1 ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC < 1:8769321/35‑1 ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC < 1:2378930/35‑1 ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC < 1:3594885/35‑1 ACCACCCACAAGAAAGAGCTGATTGCAGAAGATGC < 1:16804091/35‑1 cccCCCACAAGAAAGAGCTGATTGCAGAAGCTGCC < 1:6362212/32‑1 CCACCCACAAGAAAGAGCTGATTGCAGAAGCTGCC < 1:15895606/35‑1 CCACCCACAAGAAAGAGCTGATTGCAGAAGCTGCC < 1:10603636/35‑1 CCACCCACAAGAAAGAGCTGATTGCAGAAGCTGCC < 1:8252350/35‑1 ccCCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG < 1:11721494/33‑1 CACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG > 1:18482504/1‑35 CACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG > 1:1322899/1‑35 CACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG > 1:16153222/1‑35 CACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG > 1:4678642/1‑35 ACCCACAAGAAAGAGCTGATTGCAGAATCTGCCGT > 1:4581886/1‑35 ACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGT > 1:4965903/1‑35 ACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGT > 1:7148299/1‑35 ACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGT > 1:18415485/1‑35 CCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTT > 1:761688/1‑35 CCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTT > 1:9844502/1‑35 CCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTA > 1:9917473/1‑35 CCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTA > 1:6633581/1‑35 CCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTA > 1:2264338/1‑35 CCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTA > 1:19168125/1‑35 CCACAAGAAAGAGCTGATTGCAGAAGCTGCAGTTA < 1:19820487/35‑1 CACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG > 1:6205350/1‑35 CACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG > 1:3776169/1‑35 CACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG > 1:14827286/1‑35 CACAAGAAAGAGCTGATTGCAGAAGCTGCAGTTAG < 1:20231013/35‑1 CACAAGAAAGAGCTGATTGCAGAAGCTGCAGTTAG < 1:11090239/35‑1 GGTGTGGCGCAACCGCAGAAAACGCCCCCACCACCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2204186‑2204224 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG > REL606/2724133‑2724166 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |