New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2454481 | 67 (0.650) | 14 (0.140) | 6/46 | NT | 15.1% | coding (158/342 nt) | ECB_02307 | conserved hypothetical protein |
? | REL606 | = 4471806 | 97 (0.940) | coding (1485/1503 nt) | yjgR | predicted ATPase |
AACAAATTAAAGAGATTGTAGACACTAGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2454448‑2454481 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGGGGAGAAGAAG < REL606/4471806‑4471792 | AACAAATTAAAGAGATTGTAGACACTAGCGGCAGG > 1:18153197/1‑35 ACAAATTAAAGAGATTGTAGACACTAGCGGCAGGG > 1:14720496/1‑35 ACAAATTAAAGAGATTGTAGACACTAGCGGCAGGG > 1:4599232/1‑35 CAAATTAAAGAGATTGTAGACACTAGCGGGAGGGG > 1:4519857/1‑35 AAATTAAAGAGATTGTAGACACTAGCGGCAGGGGc > 1:19682972/1‑34 AAATTAAAGAGATTGTAGACACTAGCGGCAGGGGG > 1:13578383/1‑35 AAATTAAAGAGATTGTAGACACTAGCGGCAGGGGG > 1:16034747/1‑35 AAATTAAAGAGATTGTAGACACTAGCGGCAGGGGG > 1:8705271/1‑35 AAATTAAAGAGATTGTAGACACTAGCGGCAGGGGG > 1:18043660/1‑35 AAATTAAAGAGATTGTAGACACTAGCGGCAGGGGG > 1:8246476/1‑35 AATTAAAGAGATTGTAGACACTAGCGGCAGGGGGG > 1:4758890/1‑35 AATTAAAGAGATTGTAGACACTAGCGGCAGGGGGG > 1:6482195/1‑35 ATTAAAGAGATTGTAGACACTAGCGGCAGGGGGGG > 1:3149231/1‑35 ATTAAAGAGATTGTAGACACTAGCGGCAGGGGGGG > 1:20032867/1‑35 ATTAAAGAGATTGTAGACACTAGCGGCAGGGGGGG > 1:18500721/1‑35 ATTAAAGAGATTGTAGACACTAGCGGCAGGGGGGG > 1:15835661/1‑35 ATTAAAGAGATTGTAGACACTAGCGGCAGGGGGGG > 1:12652978/1‑35 TTAAAGAGATTGTAGACACTAGCGGCAGGGGGGGG > 1:4349664/1‑35 AAAGAGATTGTAGACACTAGCGGCAGGGGGGGagg > 1:15451741/1‑32 AAAGAGATTGTAGACACTAGCGGCAGGGGGGGGGg > 1:17463084/1‑34 AAAGAGATTGTAGACACTAGCGGCAGGGGGGGGGg > 1:406835/1‑34 AAAGAGATTGTAGACACTAGCGGCAGGGGGGGGGA > 1:8733079/1‑35 AAGAGATTGTAGACACTAGCGGCAGGGGGGGGGgg > 1:14770063/1‑33 AAGAGATTGTAGACACTAGCGGCAGGGGGGGGGAG > 1:373731/1‑35 AGAGATTGTAGACACTAGCGGCAGGGGGGGGGggg > 1:1797968/1‑32 AGAGATTGTAGACACTAGCGGCAGGGGGGGGGgac > 1:6810944/1‑32 AGAGATTGTAGACACTAGCGGCAGGGGGGGGGGGA > 1:5486306/1‑35 AGAGATTGTAGACACTAGCGGCAGGGGGGGGGAGA > 1:7070088/1‑35 AGATTGTAGACACTAGCGGCAGGGGGGGGGAGAAa > 1:724032/1‑34 GATTGTAGACACTAGCGGCAGGGGGGGGGAGAAGA > 1:2210310/1‑35 ATTGTAGACACTAGCGGCAGGGGGGGGGAGAAGAA > 1:7490360/1‑35 TTGTAGACACTAGCGGCAGGGGGGGGGAGAAAAAa > 1:4617533/1‑34 | AACAAATTAAAGAGATTGTAGACACTAGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2454448‑2454481 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGGGGAGAAGAAG < REL606/4471806‑4471792 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |