New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2881323 | 43 (0.420) | 10 (0.130) | 4/36 | NT | 12.7% | coding (855/1230 nt) | yqeG | predicted transporter |
? | REL606 | 3882315 = | 105 (1.360) | coding (103/816 nt) | atpB | F0F1 ATP synthase subunit A |
CGCTTTCTATGCTGCCGAACGCCCCAGCATGGCTGTCAATTTCCGGGATTATTGTCGCAGTAGTTGCGA > REL606/2881289‑2881357 | cgcTTTCTATGCTGCCGAACGCCCCAGCATGGCTG > 1:15975265‑M1/1‑35 (MQ=255) cgcTTTCTATGCTGCCGAACGCCCCAGCATGGCTG > 1:16622793‑M1/1‑35 (MQ=255) cgcTTTCTATGCTGCCGAACGCCCCAGCATGGCTG < 1:8473964‑M1/35‑1 (MQ=255) cgcTTTCTATGCTGCCGAACGCCCCAGCATGGCTG < 1:15324657‑M1/35‑1 (MQ=255) cgcTTTCTATGCTGCCGAACGCCCCAGCATGGCTG < 1:13485244‑M1/35‑1 (MQ=255) cgcTTTCTATGCTGCCGAACGCCCCAGCATGGCTG < 1:8176615‑M1/35‑1 (MQ=255) gcTTTCTATGCTGCCGAACGCCCCAGCATGGCTGg > 1:4999300‑M1/1‑34 (MQ=255) gcTTTCTATGCTGCCGAACGCCCCAGCATGGCTGg > 1:11460935‑M1/1‑34 (MQ=255) gcTTTCTATGCTGCCGAACGCCCCAGCATGGCTGg > 1:11502783‑M1/1‑34 (MQ=255) gcTTTCTATGCTGCCGAACGCCCCAGCATGGCTGg > 1:13255920‑M1/1‑34 (MQ=255) gcTTTCTATGCTGCCGAACGCCCCAGCATGGCTGg > 1:19842002‑M1/1‑34 (MQ=255) cTTTCTATGCTGCCGAACGCCCCAGCATGGCTGgg > 1:19209049‑M1/1‑33 (MQ=255) cTTTCTATGCTGCCGAACGCCCCAGCATGGCTGTc < 1:8188631/35‑1 (MQ=255) tttCTATGCTGCCGAACGCCCCAGCATGGCTGggg > 1:3615120‑M1/1‑32 (MQ=255) tttCTATGCTGCCGAACGCCCCAGCATGGCTGTCa < 1:18575455/35‑1 (MQ=255) tttCTATGCTGCAGAACGCCCCAGCATGGCTGTCa < 1:17399079/35‑1 (MQ=255) ttCTATGCTGCCGAACGCCCCAGCATGGCTGTCaa < 1:11490193/35‑1 (MQ=255) ttCTATGCTGCCGAACGCCCCAGCATGGCTGTCaa < 1:6324508/35‑1 (MQ=255) ttCTATGCTGCCGAACGCCCCAGCATGGCTGTCaa < 1:6042549/35‑1 (MQ=255) cTATGCTGCCGAACGCCCCAGCATGGCTGgggggt > 1:13872137‑M1/1‑29 (MQ=255) cTATGCTGCCGAACGCCCCAGCATGGCTGgggggt > 1:1728966‑M1/1‑29 (MQ=255) cTATGCTGCCGAACGCCCCAGCATGGCTGTCAAtt < 1:5801090/35‑1 (MQ=255) tATGCTGCCGAACGCCCCAGCATGGCTGggggttt > 1:18111616‑M1/1‑28 (MQ=255) tATGCTGCCGAACGCCCCAGCATGGCTGggggttt > 1:10238695‑M1/1‑28 (MQ=255) tATGCTGCCGAACGCCCCAGCATGGCTGTCAAttt < 1:19180101/35‑1 (MQ=255) aTGCTGCCGAACGCCCCAGCATGGCTGggggtttt > 1:11357587‑M1/1‑27 (MQ=255) aTGCTGCCGAACGCCCCAGCATGGCTGgggggttt > 1:7373631‑M1/1‑27 (MQ=255) aTGCTGCCGAACGCCCCAGCATGGCTGggggggtt > 1:18690715‑M1/1‑27 (MQ=255) aTGCTGCCGAACGCCCCAGAATGGCTGTCAATTTc < 1:7528677/35‑1 (MQ=255) tgctgcCGAACGCCCCAGCATGGCTGgggggtttc > 1:15954982‑M1/1‑26 (MQ=255) tgctgcCGAACGCCCCAGCATGGCCGGCAATTTcc > 1:7680796/1‑35 (MQ=38) gctgcCGAACGCCCCAGCATGGCTGgggggtttcc > 1:19061584‑M1/1‑25 (MQ=255) cctgcCGAACGCCCCAGCATGGCTGTCAATTTCCg < 1:8841489/34‑1 (MQ=255) tgcCGAACGCCCCAGCATGGCTGTCAATTTCCggg < 1:11022912/35‑1 (MQ=255) tgcCGAACGCCCCAGCATGGCTGTCAATTTCCggg < 1:15913168/35‑1 (MQ=255) gcCGAACGCCCCAGCATGGCTGgggggttttgggg > 1:6219193‑M1/1‑22 (MQ=255) gcCGAACGCCCCAGCATGGCTGTCAATTTCCGGGa < 1:10209987/35‑1 (MQ=255) ccGAACGCCCCAGCATGGCTGTCAATTTCCGGGat < 1:8179254/35‑1 (MQ=255) ccGAACGCCCCAGCATGGCTGTCAATTTCCGGGat < 1:15931681/35‑1 (MQ=255) cGAACGCCCCAGCATGGCTGTCAATTTCCGGGatt < 1:12626997/35‑1 (MQ=255) gAACGCCCCAGCATGGCTGTCAATTTCCGGGatta < 1:11935359/35‑1 (MQ=255) gAACGCCCCAGCATGGCTGTCAATTTCCGGGatta < 1:18774156/35‑1 (MQ=255) aaCGCCCCAGCATGGCTGTCAATTTCCGGGattat < 1:7656776/35‑1 (MQ=255) aaCGCCCCAGCATGGCTGTCAATTTCCGGGattat < 1:20056443/35‑1 (MQ=255) aaCGCCCCAGCATGGCTGTCAATTTCCGGGattat < 1:13042887/35‑1 (MQ=255) aaCGCCCCAGCATGGCTGTCAATTTCCGGGattat < 1:1253314/35‑1 (MQ=255) aCGCCCCAGCATGGCTGTCAATTTCCGGGattatt < 1:15893486/35‑1 (MQ=255) aCGCCCCAGCATGGCTGTCAATTTCCGGGattatt < 1:9117289/35‑1 (MQ=255) aCGCCCCAGCATGGCTGTCAATTTCCGGGattatt < 1:15854771/35‑1 (MQ=255) aCGCCCCAGCATGGCTGGCAATTTCCGGGattatt < 1:2522584/35‑1 (MQ=255) gCCCCAGCATGGCTGTCAATTTCCGGGATTATTGt < 1:6295705/35‑1 (MQ=255) gCCCCAGCATGGCTGTCAATTTCCGGGATTATTGt < 1:15416007/35‑1 (MQ=255) gCCCCAGCATGGCTGTCAATTTCCGGGATTATAGt < 1:440598/35‑1 (MQ=255) gCCCCAGCATGGCTGTCAATTTCAGGGATTATTGt < 1:7464268/35‑1 (MQ=255) cccAGCATGGCTGTCAATTTCCGGGATTATTGTCg < 1:1797246/35‑1 (MQ=255) cccAGCATGGCCGGCAATTTCCGGGATTATTGTCg > 1:19444221/1‑35 (MQ=37) ccAGCATGGCTGTCAATTTCCGGGATTATTGTCGc < 1:2460609/35‑1 (MQ=255) ccAGCATGGCTGTCAATTTCCGGGATTATTGTCGc < 1:12521180/35‑1 (MQ=255) aGCATGGCTGTCAATTTCCGGGATTATTGTCGCag < 1:15612370/35‑1 (MQ=255) aGCATGGCTGTCAATTTCCGGGATTATTGTCGCag < 1:8804947/35‑1 (MQ=255) aGCATGGCTGTCAATTTCCGGGATTATTGTCGCag < 1:18825319/35‑1 (MQ=255) aGCATGCCTGTCATTTTCCGGGATTATTGTCGCag > 1:4020150/1‑35 (MQ=37) gCATGGCTGTCAATTTCCGGGATTATTGTCGCagt < 1:16960041/35‑1 (MQ=255) cATGGCTGTCAATTTCCGGGATTATTGTCGCagta < 1:10778306/35‑1 (MQ=255) cATGGCTGTCAATTTCCGGGATTATTGTCGCagta < 1:5752542/35‑1 (MQ=255) aTGGCTGTCAATTTCCGGGATTATTGTCGCagtag < 1:6173636/35‑1 (MQ=255) aTGGCTGTCAATTTCCGGGATTATTGTCGCagtag < 1:7673821/35‑1 (MQ=255) aTGGCTGTCAATTTCCGGGATTATTGTCGCagtag < 1:10109036/35‑1 (MQ=255) tGGCTGTCAATTTCCGGGATTATTGTCGCagtagt < 1:3091080/35‑1 (MQ=255) tGGCTGTCAATTTCCGGGATTATTGTCGCagtagt < 1:19450684/35‑1 (MQ=255) tGGCTGTCAATTTCCGGGATTATTGTCGCagtagt < 1:7250001/35‑1 (MQ=255) tGGCTGTAAATTTCCGGGATTATTGTCGCagtagt < 1:18183025/35‑1 (MQ=255) ggCTGTCAATTTCCGGGATTATTGTCGCAGTAGtt < 1:4703049/35‑1 (MQ=255) ggCTGTCAATTTCCGGGATTATTGTCGCAGTAGtt < 1:7501737/35‑1 (MQ=255) ggCTGTCAATTTCCGGGATTATTGTCGCAGTAGtt < 1:14812708/35‑1 (MQ=255) ggCTGTCAATTTCCGGGATTATTGTCGCAGTAGtt < 1:1033424/35‑1 (MQ=255) gCTGTCAATTTCCGGGATTATTGTCGCAGTAGTTg > 1:9151782/1‑35 (MQ=255) gCTGTCAATTTCCGGGATTATTGTCGCAGTAGTTg > 1:7126409/1‑35 (MQ=255) cTGTCAATTTCCGGGATTATTGTCGCAGTAGTTGc < 1:10998982/35‑1 (MQ=255) cTGTCAATTTCCGGGATTATTGTCGCAGTAGTTGc < 1:13448622/35‑1 (MQ=255) cTGTCAATTTCCGGGATTATTGTCGCAGTAGTTGc > 1:15095791/1‑35 (MQ=255) cTGTCAATTTCCGGGATTATTGTCGCAGTAGTTGc < 1:16699325/35‑1 (MQ=255) cTGTCAATTTCCGGGATTATTGTCGCAGTAGTTGc > 1:17847503/1‑35 (MQ=255) cTGTCAATTTCCGGGATTATTGTCGCAGTAGTTGc < 1:1916799/35‑1 (MQ=255) cTGTCAATTTCCGGGATTATTGTCGCAGTAGTTGc > 1:6816725/1‑35 (MQ=255) tGTCAATTTCCGGGATTATTGTCGCAGTAGTTGCg > 1:19827207/1‑35 (MQ=255) tGTCAATTTCCGGGATTATTGTCGCAGTAGTTGCg > 1:1810472/1‑35 (MQ=255) tGTCAATTTCCGGGATTATTGTCGCAGTAGTTGCg > 1:3052380/1‑35 (MQ=255) tGTCAATTTCCGGGATTATTGTCGCAGTAGTTGCg < 1:3390584/35‑1 (MQ=255) tGTCAATTTCCGGGATTATTGTCGCAGTAGTTGCg > 1:8574291/1‑35 (MQ=255) tGTCAATTTCCGGGATTATTGTCGCAGTAGTTGCg > 1:16271235/1‑35 (MQ=255) gTCAATTTCCGGGATTATTGTCGCAGTAGTTGCGa < 1:20492431/35‑1 (MQ=255) gTCAATTTCCGGGATTATTGTCGCAGTAGTTGCGa < 1:3392575/35‑1 (MQ=255) gTCAATTTCCGGGATTATTGTCGCAGTAGTTGCGa > 1:4340920/1‑35 (MQ=255) | CGCTTTCTATGCTGCCGAACGCCCCAGCATGGCTGTCAATTTCCGGGATTATTGTCGCAGTAGTTGCGA > REL606/2881289‑2881357 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |