Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 3,015,771 IS150 (–) +3 bp 97.6% coding (1192‑1194/1677 nt) ECB_02816 → KpsD protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 2775877NA (NA)109 (1.160) 37/44 NT 97.9% noncoding (1/1443 nt) IS150 repeat region
?REL606 3015771 = 2 (0.020)coding (1192/1677 nt) ECB_02816 KpsD protein
* ? REL606 = 30157733 (0.040)97 (0.980) 40/46 NT 96.6% coding (1194/1677 nt) ECB_02816 KpsD protein
?REL606 = 3894996 NA (NA)noncoding (1443/1443 nt) IS150 repeat region

Only 100 of 141 total aligned reads displayed.

TTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2775848‑2775877
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCA  >  REL606/3015771‑3015804
                                                                
TTCATCGTCCAACAAAATGGGTGCAGTACACTTTC                               >  1:10585671/1‑35
TTCATCGTCCAACAAAATGGGTGCAGTACACTTTC                               >  1:8811953/1‑35
TTCATCGTCCAACAAAATGGGTGCAGTACACTCTC                               <  1:19976234/35‑1
 TCATCGTCCAACAAAATGGGTGCAGTACACTTTCT                              >  1:3602582/1‑35
 TCATCGTCCAACAAAATGGGTGCAGTACACTTTCT                              <  1:9103824/35‑1
 TCATCGTCCAACAAAATGGGTGCAGTACACTTTCT                              >  1:12178769/1‑35
 TCATCGTCCAACAAAATGGGTGCAGTACACTTTCT                              <  1:1507408/35‑1
  CATCGTCCAACAAAATGGGTGCAGTACACTTTCTG                             <  1:20125633/35‑1
  CATCGTCCAACAAAATGGGTGCAGTACACTTTCTG                             <  1:19019247/35‑1
  CATCGTCCAACAAAATGGGTGCAGTACACTTTCTG                             <  1:8217389/35‑1
  CATCGTCCAACAAAATGGGTGCAGTACACTTTCTG                             >  1:8322173/1‑35
  CATCGTCCAACAAAATGGGTGCAGTACACTTTCTG                             <  1:16303983/35‑1
  CATCGTCCAACAAAATGGGTGCAGTACACTTTCTG                             >  1:8960367/1‑35
  CATCGTCCAACAAAATGGGTGCAGTACACTCTCTt                             <  1:10129657/35‑2
   ATCGTCCAACAAAATGGGTGCAGTACACTTTCTGC                            <  1:6435409/35‑1
   ATCGTCCAACAAAATGGGTGCAGTACACTTTCTGC                            <  1:18571660/35‑1
   ATCGTCCAACAAAATGGGTGCAGTACACTTTCTGC                            >  1:18142849/1‑35
    TCGTCCAACAAAATGGGTGCAGTACACTTTCTGac                           <  1:17943087/35‑3
    TCGTCCAACAAAATGGGTGCAGTACACTTTCTGCC                           <  1:958079/35‑1
    TCGTCCAACAAAATGGGTGCAGTACACTTTCTGCC                           <  1:20611137/35‑1
     CGTCCAACAAAATGGGTGCAGTACACTTTCTGCCC                          <  1:12376254/35‑1
      GTCCAACAAAATGGGTGCAGTACACTTTCTGCCCA                         >  1:14013122/1‑35
      GTCCAACAAAATGGGTGCAGTACACTTTCTGCCCA                         >  1:12293588/1‑35
      GTCCAACAAAATGGGTGCAGTACACTTTCTGCCCA                         <  1:16002933/35‑1
      GTCCAACAAAATGGGTGCAGTACACTTTCTGCCCA                         >  1:2115644/1‑35
       TCCAACAAAATGGGTGCAGTACACTTTCTGCCCAG                        <  1:11039746/35‑1
       TCCAACAAAATGGGTGCAGTACACTTTCTGCCCAG                        <  1:8892937/35‑1
       TCCAACAAAATGGGTGCAGTACACTTTCTGCCCAG                        <  1:6016540/35‑1
       TCCAACAAAATGGGTGCAGTACACTTTCTGCCCAG                        <  1:2355547/35‑1
        CCAACAAAATGGGTGCAGTACACTTTCTGCCCAGT                       <  1:20412445/35‑1
        CCAACAAAATGGGTGCAGTACACTTTCTGCCCAGT                       <  1:5567874/35‑1
         CAACAAAATGGGTGCAGTACACTTTCTGCCCATTC                      >  1:12628641/1‑35
         CAACAAAATGGGTGCAGTACACTTTCTGCCCAGTC                      <  1:15771863/35‑1
         CAACAAAATGGGTGCAGTACACTTTCTGCCCAGTC                      <  1:10430561/35‑1
         CAACAAAATGGGTGCAGTACACTTTCTGCCCAGTC                      <  1:19342820/35‑1
         CAACAAAATGGGTGCAGTACACTTTCTGCCCAGTC                      <  1:716700/35‑1
          AACAAAATGGGTGCAGTACACTTTCTGCCCAGTCA                     <  1:1958813/35‑1
          AACAAAATGGGTGCAGTACACTTTCTGCCCAGTCA                     <  1:6929676/35‑1
          AACAAAATGGGTGCAGTACACTTTCTGCCCAGTCA                     <  1:15815354/35‑1
          AACAAAATGGGTGCAGTACACTTTCTGCCCAGTCA                     >  1:7545592/1‑35
          AACAAAATGGGTGCAGTACACTTTCTGCCCAGTCA                     <  1:18263547/35‑1
           ACAAAATGGGTGCAGTACACTTTCTGCCCAGTCAT                    <  1:1438419/35‑1
            CAAAATGGGTGCAGTACACTTTCTGCCCAGTCATC                   <  1:6658111/35‑1
            CAAAATGGGTGCAGTACACTTTCTGCCCAGTCATC                   >  1:10308404/1‑35
            CAAAATGGGTGCAGTACACTTTCTGCCCAGTCATC                   <  1:20014118/35‑1
             AAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC                  <  1:8980174/35‑1
             AAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC                  <  1:305983/35‑1
             AAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC                  >  1:14968577/1‑35
             AAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC                  >  1:11212992/1‑35
             AAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC                  <  1:10993932/35‑1
             AAAATGGGTGCAGTACACTTTCTGCACAGTCATCC                  <  1:7277826/35‑1
              AAATGGGTGCAGTACACTTTCTGCCCAGTCATCCA                 >  1:15568427/1‑35
              AAATGGGTGCAGTACACTTTCTGCCCAGTCATCCA                 >  1:15922113/1‑35
              AAATGGGTGCAGTACACTTTCTGCCCAGTCATCCA                 <  1:10825599/35‑1
              AAATGGGTGCAGTACACTTTCTGCCCAGTCATCCA                 <  1:19625677/35‑1
              AAATGGGTGCAGTACACTTTCTGCACAGTCATCCA                 <  1:6067611/35‑1
               gATGGGTGCAGTACACTTTCTGCCCAGTCATCCAC                <  1:163360/34‑1
               AATGGGTGCAGTACACTTTCTGCCCAGTCATCCAC                >  1:6693452/1‑35
               AATGGGTGCAGTACACTTTCTGCCCAGTCATCCAC                <  1:19637690/35‑1
               AATGGGTGCAGTACACTTTCTGCCCAGTCATCCAC                <  1:4616861/35‑1
                ATGGGTGCAGTACACTTTCTGCCCAGTCATCCACC               >  1:16899893/1‑35
                 TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCA              <  1:9996273/35‑1
                 TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCA              <  1:413635/35‑1
                 TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCA              <  1:1531768/35‑1
                 TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCA              >  1:19287362/1‑35
                 TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCA              >  1:18611485/1‑35
                  GGGTGCAGTACACTTTCTGCCCAGTCATCCACCAA             >  1:6812638/1‑35
                  GGGTGCAGTACACTTTCTGCCCAGTCATCCACCAA             <  1:1856003/35‑1
                  GGGTGCAGTACACTTTCTGCCCAGTCATCCACCAA             >  1:9573095/1‑35
                   GGTGCAGTACACTTTCTGCCCAGTCATCCACCAAA            >  1:10977020/1‑35
                   GGTGCAGTACACTTTCTGCCCAGTCATCCACCAAA            <  1:5645095/35‑1
                   GGTGCAGTACACTTTCTGCCCAGTCATCCACCAAA            <  1:11990473/35‑1
                    GTGCAGTACACTTTCTGCCCAGTCATCCACCAAAG           >  1:331694/1‑35
                    GTGCAGTACACTTTCTGCCCAGTCATCCACCAAAG           >  1:6413262/1‑35
                     TGCAGTACACTTTCTGCCCAGTCATCCACCAAAGA          <  1:13900448/35‑1
                     TGCAGTACACTTTCTGCCCAGTCATCCACCAAAGA          <  1:20331566/35‑1
                      GCAGTACACTTTCTGCCCAGTCATCCACCAAAGAA         >  1:9133667/1‑35
                      GCAGTACACTTTCTGCCCAGTCATCCACCAAAGAA         >  1:2393980/1‑35
                       CAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG        >  1:17722129/1‑35
                       CAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG        >  1:17489285/1‑35
                       CAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG        >  1:20451152/1‑35
                       CAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG        <  1:3932050/35‑1
                       CAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG        >  1:10897976/1‑35
                         GTAGACTTTCTGCCCAGTCATCCACCAAAGAAGAA      <  1:9866886/35‑1
                         GTACACTTTCTGCCCAGTCATCCACCAAAGAAGAA      >  1:311293/1‑35
                          nACACTTTCTGCCCAGTCATCCACCAAAGAAGAAG     >  1:18451743/2‑35
                          TACACTTTCTGCCCAGTCATCCACCAAAGAAGAAG     >  1:1562547/1‑35
                           ACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGC    <  1:16497524/35‑1
                           ACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGC    <  1:8743355/35‑1
                           ACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGC    <  1:18973625/35‑1
                           ACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGC    <  1:2135779/35‑1
                           ACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGC    >  1:3536743/1‑35
                            CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC   >  1:8836653/1‑35
                            CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC   >  1:7272745/1‑35
                            CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC   >  1:20528379/1‑35
                            CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC   <  1:9323085/35‑1
                            CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC   <  1:5881268/35‑1
                            CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC   >  1:4663497/1‑35
                            CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCC   >  1:4622795/1‑35
                            CACTTTATGCCCAGTCATCCACCAAAGAAGAAGCC   <  1:7499478/35‑1
                                                                
TTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2775848‑2775877
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCA  >  REL606/3015771‑3015804

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.