New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2926199 = | 70 (0.680) | 14 (0.180) | 5/36 | NT | 18.0% | coding (378/408 nt) | ygfX | hypothetical protein |
? | REL606 | 3944634 = | 75 (0.970) | intergenic (+23/‑124) | proM/aslB | tRNA‑Pro/predicted regulator of arylsulfatase activity |
Only 100 of 263 total aligned reads displayed.
TCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCC > REL606/3944600‑3944668 | tctcGCCGACCAATTTTGAACCCCGCTTCGGCggg < 1:11167980/35‑1 (MQ=255) tctcGCCGACCAATTTTGAACCCCGCTTCGGCggg < 1:6640722/35‑1 (MQ=255) tctcGCCGACCAATTTTGAACCCCGCTTCGGCggg < 1:13114209/35‑1 (MQ=255) tctcGCCGACCAATTTTGAACCCCGCTTCGGCggg < 1:15864223/35‑1 (MQ=255) cttacagcagaggaacttgatgcgttaacggcggg > 1:11014334‑M2/35‑35 (MQ=255) catggacgaagctgaatggcgggatttacggcggg > 1:17195392‑M2/35‑35 (MQ=255) agcgcgcaggcatcagcatcaccgctgTCGGCggg < 1:10252237‑M1/8‑1 (MQ=255) ctcGCCGACCAATTTTGAACCCCGCTTCGGCgggg > 1:15559692/1‑35 (MQ=255) ctcGCCGACCAATTTTGAACCCCGCTTCGGCgggg < 1:2472275/35‑1 (MQ=255) ctcGCCGACCAATTTTGAACCCCGCTTCGGCgggg < 1:11937961/35‑1 (MQ=255) atggacgaagctgaatggcgggatttacggcgggg > 1:9743561‑M2/34‑35 (MQ=255) tcGCCGACCAATTTTGAACCCCGCTTCGGCggggg > 1:9368342/1‑34 (MQ=255) tcGCCGACCAATTTTGAACCCCGCTTCGGCGGGGt < 1:15209505/35‑1 (MQ=255) tcGCCGACCAATTTTGAACCCAGCTTCGGCGGGGt < 1:4846093/35‑1 (MQ=255) tacagcagaggaacttgatgcgttaacggcgggtg > 1:14175929‑M2/33‑33 (MQ=255) tacagcagaggaacttgatgcgttaacggcggGGt > 1:14243311‑M2/33‑35 (MQ=255) tacagcagaggaacttgatgcgttaacggcggGGt > 1:8387989‑M2/33‑35 (MQ=255) cgcgcaggcatcagcatcaccgctgTCGGCGGGGt < 1:613562‑M1/10‑1 (MQ=255) ggacgaagctgaatggcgggatttacggcgggggt > 1:12932003‑M2/32‑33 (MQ=255) ctgaaagggcgagtagggcgcaaagtggcggGGtt > 1:13995456‑M2/32‑35 (MQ=255) cGCCGACCAATTTTGAACCCCGCTTCGGCgggggt > 1:13644178/1‑33 (MQ=255) acagcagaggaacttgatgcgttaacggcgggggt > 1:18990954‑M2/32‑33 (MQ=255) acagcagaggaacttgatgcgttaacggcggGGtt > 1:16325354‑M2/32‑35 (MQ=255) acagcagaggaacttgatgcgttaacggcggGGtt > 1:18471802‑M2/32‑35 (MQ=255) acagcagaggaacttgatgcgttaacggcggGGtt > 1:6670627‑M2/32‑35 (MQ=255) tgaaagggcgagtagggcgcaaagtggcggGTttt > 1:9010996‑M2/31‑35 (MQ=255) tgaaagggcgagtagggcgcaaagtggcggGTttt > 1:8163370‑M2/31‑35 (MQ=255) tgaaagggcgagtagggcgcaaagtggcggGGttt > 1:871945‑M2/31‑35 (MQ=255) gCCGACCAATTTTGAACCCCGCTTCGGCGGGGgtt > 1:14893356/1‑35 (MQ=255) cgcaggcatcagcatcaccgctgTCGGCGGGgttc < 1:7552102‑M1/12‑2 (MQ=255) gcaggcatcagcatcaccgctgTCGGCGGGTtttt < 1:17758606‑M1/13‑1 (MQ=255) gcaggcatcagcatcaccgctgTCGGCGGGGtttt < 1:12238301‑M1/13‑1 (MQ=255) gaaagggcgagtagggcgcaaagtggcggGGtttt > 1:10418954‑M2/30‑35 (MQ=255) acgaagctgaatggcgggatttacggcggGGtttt > 1:3338402‑M2/30‑35 (MQ=255) acgaagctgaatggcgggatttacggcggGGtttt > 1:19695177‑M2/30‑35 (MQ=255) gcagaggaacttgatgcgttaacggcggGGttttt > 1:5866774‑M2/29‑35 (MQ=255) cGACCAATTTTGAACCCCGCTTCGGCGGGGttttt < 1:8966949/35‑1 (MQ=255) aaagggcgagtagggcgcaaagtggcggGGttctt > 1:18578463‑M2/29‑35 (MQ=255) aaagggcgagtagggcgcaaagtggcggGGttctt > 1:11346253‑M2/29‑35 (MQ=255) gACAAATTTTGAACCCCGCTTCGGCGGGGtttttt < 1:10648876/35‑1 (MQ=255) aggcatcagcatcaccgctgTCGGCGGggttttgt < 1:13747123‑M1/15‑3 (MQ=255) aagggcgagtagggcgcaaagtggcggGTtttttt > 1:13411492‑M2/28‑35 (MQ=255) agggcgagtagggcgcaaagtggcggGgttctttt > 1:2322133‑M2/27‑34 (MQ=255) agggcgagtagggcgcaaagtggcggGgttctttt > 1:18114667‑M2/27‑34 (MQ=255) agaggaacttgatgcgttaacggcggGgttttttt > 1:3887386‑M2/27‑34 (MQ=255) aagctgaatggcgggatttacggcggGGTTTTTTg > 1:448553‑M2/27‑35 (MQ=255) aCCAATTTTGAACCCCGCTTCGGCGGGGGTTTTTg > 1:16142169/1‑35 (MQ=255) gggcgagtagggcgcaaagtggcggggttttttat > 1:13727478‑M2/26‑33 (MQ=255) gaggaacttgatgcgttaacggcggggtttttttt > 1:12517515‑M2/26‑33 (MQ=255) gaggaacttgatgcgttaacggcggggtttttttt > 1:14740925‑M2/26‑33 (MQ=255) gctgaatggcgggatttacggcggggttttttttg > 1:1796005‑M2/25‑32 (MQ=255) catcagcatcaccgctgTCGGCGgggtttttttgc < 1:11548488‑M1/18‑4 (MQ=255) cAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGtt < 1:19191611/35‑1 (MQ=255) gcgagtagggcgcaaagtggcggGGTTTTTTTttt > 1:16498765‑M2/24‑35 (MQ=255) aaTTTTGAACCCCGCTTCGGCGGGGTTTTTTGttt > 1:10474811/1‑35 (MQ=255) aTTTTGAACCCCGCTTCGGCGGGGTTTTTTGtttt < 1:19547027/35‑1 (MQ=255) aTTTTGAACCCCGCTTCGGCGGGGGTTTTTGtttt > 1:18349241/1‑35 (MQ=255) aTTTTGAACCCCGCTTCGGCGGGGGTTTTTGtttt > 1:5702697/1‑35 (MQ=255) ttttGAACCCCGCTTCGGCGGGGGTTTTTGTTTTc > 1:9161744/1‑35 (MQ=255) ttttGAACCCCGCTTCGGCGGGGGTTTTTGTTTTc > 1:6346519/1‑35 (MQ=255) tttGAACCCCGCTTCGGCGGGGGTTTTTGTTTTCt > 1:3719336/1‑35 (MQ=255) tttGAACCCCGCTTCGGCGAGGTTTTTTGTTTTCt < 1:17644151/35‑1 (MQ=255) ttGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCtg < 1:4085750/35‑1 (MQ=255) ttGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCtg > 1:6458082/1‑35 (MQ=255) ttGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCtg < 1:3083504/35‑1 (MQ=255) ttGAACCCCGCTTCGGCGGGGGTTTTTGTTTTCtg > 1:11667603/1‑35 (MQ=255) gAACCCCGCTTCGGCGGGGTTTTTTTGTTTCtttg > 1:7211119/1‑35 (MQ=17) gAACCCCGCTTCGGCGGGGTTTTTTGTTTTCtgtg < 1:1006140/35‑1 (MQ=255) gAACCCCGCTTCGGCGGGGTTTTTTGTTTTCtgtg < 1:14578369/35‑1 (MQ=255) gAACCCCGCTTCGGCGGGGTTTTTTGTTTTCtgtg < 1:7717531/35‑1 (MQ=255) aCCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCa < 1:892790/35‑1 (MQ=255) aCCCCGCTTCGGCGGGGGTTTTTGTTTTCTGTGCa > 1:12853257/1‑35 (MQ=255) aCCCCGCTTCGGCGGGGGTTTTTGTTTTCTGTGCa > 1:11233915/1‑35 (MQ=255) cccGCTTCGGCGGGGTTTTTTGTTTTCTGTGCAtt < 1:16892397/35‑1 (MQ=255) cccGCTTCGGCGGGGGTTTTTGTTTTCTGTGCAtt > 1:202573/1‑35 (MQ=255) cccGCTTCGGCGGGGGTTTTTGTTTTCTGTGCAtt > 1:8622842/1‑35 (MQ=255) ccGCTTCGGCGGGGTTTTTTGTTTTCTGTGCAttt < 1:8553698/35‑1 (MQ=255) cGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTc < 1:1736998/35‑1 (MQ=255) cTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGt < 1:16461498/35‑1 (MQ=255) ttCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTc < 1:2848256/35‑1 (MQ=255) TCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCa > 1:9221483‑M1/1‑35 (MQ=255) TCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCa > 1:15503019‑M1/1‑35 (MQ=255) cggctgGGTTTTTTGTTTTCTGTGCATTTCGTCAc > 1:582581‑M2/7‑35 (MQ=255) cggcggGGTTTTTTGTTTTCTGTGCATTTCGTCAc < 1:19739324‑M2/29‑1 (MQ=255) cggcggGGTTTTTTGTTTTCTGTGCATTTCGTCAc < 1:1235366‑M2/29‑1 (MQ=255) ggcggGGTTTTTTGTTTTCTGTGCATTTCGTCACt < 1:14537879‑M2/30‑1 (MQ=255) ggcggGGTTTTTTGTTTTCTGTGCATTTCGTCACt > 1:16731127‑M2/6‑35 (MQ=255) ggcggGGTTTTTTGTTTTCTGTGCATTTCGTCACt > 1:5518706‑M2/6‑35 (MQ=255) ggcggGGTTTTTTGTTTTCTGTGCATTTCGTCACt > 1:20548076‑M2/6‑35 (MQ=255) gcggGGTTTTTTGTTTTCTGTGCATTTCGTCACtt > 1:18261777‑M2/5‑35 (MQ=255) gcggGGTTTTTTGTTTTCTGTGCATTTCGTCACtt < 1:12134190‑M2/31‑1 (MQ=255) gcggGGTTTTTTGTTTTCTGTGCATTTCGTCACtt > 1:20108245‑M2/5‑35 (MQ=255) cggGGTTTTTTGTTTTCTGTGCATTTCGTCACttt > 1:7968664‑M2/4‑35 (MQ=255) cggGGTTTTTTGTTTTCTGTGCATTTCGTCACttt > 1:22223‑M2/4‑35 (MQ=255) cggGGTTTTTTGTTTTCTGTGCATTTCGTCACttt > 1:14295387‑M2/4‑35 (MQ=255) ggGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTc > 1:9556799‑M2/3‑35 (MQ=255) gGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTcc > 1:3556642‑M2/2‑35 (MQ=255) gGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTcc > 1:9467498‑M2/2‑35 (MQ=255) ggTTTTTTGTTTTCTGTGCATTTCGTCACTTTccc < 1:17507389/35‑1 (MQ=255) ggTTTTTTGTTTTCTGTGCATTTCGTCACTTTccc < 1:2521444/35‑1 (MQ=255) | TCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCC > REL606/3944600‑3944668 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |