New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1858460 | 47 (0.460) | 4 (0.050) | 4/40 | NT | 6.2% | intergenic (+227/+239) | insL‑4/yeaS | putative transposase insL for insertion sequence IS186/neutral amino‑acid efflux system |
? | REL606 | = 4005717 | 82 (0.960) | intergenic (+18/+265) | fre/fadA | NAD(P)H‑flavin reductase/acetyl‑CoA acetyltransferase |
Only 100 of 147 total aligned reads displayed.
CGTTTGCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAAACTTT > REL606/4005683‑4005751 | cGTTTGCATTTATCTGAGATATAAAAAAACCCGcc < 1:18659021/35‑1 (MQ=255) cGTTTGCATTTATCTGAGATATAAAAAAACCCGcc > 1:18431419/1‑35 (MQ=255) cGTTTGCATTTATCTGAGATATAAAAAAACCCGcc > 1:10733924/1‑35 (MQ=255) cGTTTGCATTTATATGAGATATAAAAAAGCCCGcc < 1:905497/35‑1 (MQ=37) gTTTGCATTTATCTGTGATATAAAAAAACCCGCCc < 1:3809844‑M2/35‑2 (MQ=255) gTTTGCATTTATCTGAGATATAAAAAAACCCTCCc < 1:19926013‑M2/35‑2 (MQ=255) gTTTGCATTTATCTGAGATATAAAAAAACCCGCCc < 1:14188472‑M2/35‑2 (MQ=255) gTTTGCATTTATCTGAGATATAAAAAAACCCGCCc < 1:16859067‑M2/35‑2 (MQ=255) gTTTGCATTTATCTGAGATATAAAAAAACCCGCCc < 1:460271‑M2/35‑2 (MQ=255) gTTTGCATTTATCTGAGATATAAAAAAACCCGCCc > 1:377462‑M2/1‑34 (MQ=255) tttGCATTTATCTGAGATATAAAAAAACCCGCCcc < 1:1078738‑M2/35‑3 (MQ=255) tttGCATTTATCTGAGATATAAAAAAACCCGCCcc < 1:6153528‑M2/35‑3 (MQ=255) tttGCATTTATCTGAGATATAAAAAAACCCGCCcc < 1:10027135‑M2/35‑3 (MQ=255) ttGCATTTATCTGAGATATAAAAAACCCCGCCcct > 1:10420658‑M2/1‑32 (MQ=255) ttGCATTTATCTGAGATATAAAAAAACCCGCCcct < 1:13930057‑M2/35‑4 (MQ=255) ttGCATTTATCTGAGATATAAAAAAACCCGCCcct < 1:8801755‑M2/35‑4 (MQ=255) ttGCATTTATCTGAGATATAAAAAAACCCGCCcct < 1:7857009‑M2/35‑4 (MQ=255) tGCATTTATCTGAGATATAAAAAACCCCGCCcctg > 1:18181900‑M2/1‑31 (MQ=255) tGCATTTATCTGAGATATAAAAAAACCCGCCcctg < 1:707714‑M2/35‑5 (MQ=255) tGCATTTATCTGAGATATAAAAAAACCCGCCcctg < 1:19322201‑M2/35‑5 (MQ=255) tGCATTTATCTGAGATATAAAAAAACCCGCCcctg < 1:2842485‑M2/35‑5 (MQ=255) tGCATTTATCTGAGATATAAAAAAACCCGCCcctg < 1:19665124‑M2/35‑5 (MQ=255) tGCATTTATCTGAGATATAAAAAAACCCGCCcctg < 1:10686218‑M2/35‑5 (MQ=255) gCATTTATCTGAGATATAAAAAAACCCGCCCCTGa > 1:6595189/1‑35 (MQ=255) gCATTTATCTGAGATATAAAAAAACCCGCCCCTGa > 1:1511425/1‑35 (MQ=255) gCATTTATCTGAGATATAAAAAAACCCGCCCCTGa > 1:11387328/1‑35 (MQ=255) aTTTATCTGAGATATAAAAAAACCCGCCCCTGACa > 1:13755077/1‑35 (MQ=255) tttATCTGAGATATAAAAAACCCCGCCCCTGACAg < 1:13138681/35‑1 (MQ=255) tttATCTGAGATATAAAAAAACCCGCCCCTGACAg > 1:1174737/1‑35 (MQ=255) tttATCTGAGATATAAAAAAACCCGCCCCTGACAg > 1:17371223/1‑35 (MQ=255) tttATCTGAGATATAAAAAAACCCGCCCCTGACAg > 1:7610960/1‑35 (MQ=255) tATCTGAGATATAAAAAACCCCGCCCCTGACAGGc < 1:19731289/35‑1 (MQ=255) tATCTGAGATATAAAAAAACCCGCCCCTGACAGGc > 1:11940240/1‑35 (MQ=255) tATCTGAGATATAAAAAAACCCGCCCCTGACAGGc > 1:12889926/1‑35 (MQ=255) tATCTGAAATAAAAAAAACCCCGCCCCTGACAGGc < 1:16761715/35‑1 (MQ=21) aTCTGAGATATAAAAAACCCCGCCCCTGACAGGCg < 1:19009610/35‑1 (MQ=255) aTCTGAGATATAAAAAAACCCGCCCCTGACAGGCg > 1:2161949/1‑35 (MQ=255) aTCTGAGATAAAAAAAACCCCGCCCCTGACAGGCg < 1:13440885/35‑1 (MQ=25) tCTGAGATATAAAAAAACCCGCCCCTGACAGGCgg > 1:2900241/1‑35 (MQ=255) tCTGAGATATAAAAAAACCCGCCCCTGACAGGCgg > 1:1013071/1‑35 (MQ=255) cTGAGATATAAAAAAACCCGCCCCTGACAGGCggg > 1:11517315/1‑35 (MQ=255) cTGAGATATAAAAAAACCCGCCCCTGACAGGCggg > 1:2257372/1‑35 (MQ=255) gagaTATAAAAAAACCCGCCCCTGACAGGCgggga > 1:15327563/1‑33 (MQ=255) gagaTATAAAAAAACCCGCCCCTGACAGGCgggga > 1:18348631/1‑33 (MQ=255) gagaTATAAAAAAACCCGCCCCTGACAGGCGGgaa > 1:15835963/1‑35 (MQ=255) gagaTATAAAAAAACCCGCCCCTGACAGGCGGgaa > 1:14373752/1‑35 (MQ=255) gagaTAT‑AAAAAACCCGCCCCTGACAGGCGGgaag > 1:920355/1‑35 (MQ=37) gagaTAAAAAAAACCCCGCCCCTGACAGGCGGgaa < 1:6150603/35‑1 (MQ=25) agaTATAAAAAAACCCGCCCCTGACAGGCTGgaag > 1:15220610/1‑35 (MQ=255) agaTATAAAAAAACCCGCCCCTGACAGGCGGggag > 1:7749201/1‑35 (MQ=255) agaTATAAAAAAACCCGCCCCTGACAGGCGGggag > 1:805136/1‑35 (MQ=255) agaTATAAAAAAACCCGCCCCTGACAGGCGGggag > 1:1399663/1‑35 (MQ=255) agaTATAAAAAAACCCGCCCCTGACAGGCGGgaag > 1:15299479/1‑35 (MQ=255) agaTATAAAAAAACCCGCCCCTGACAGGCGGgaag > 1:4603761/1‑35 (MQ=255) tataaAAAAACCCCCGCCCCTGACAGGCGGgaaga < 1:2585525/34‑1 (MQ=25) gaTATAAAAAAACCCGCCCCTGACAGGCGGgaaga > 1:15604145/1‑35 (MQ=255) gaTATAAAAAAACCCGCCCCTGACAGGCGGgaaga > 1:10557322/1‑35 (MQ=255) atatAAAAAAACCCGCCCCTGACAGGCGGgaagaa > 1:14912224/1‑35 (MQ=255) atatAAAAAAACCCGCCCCTGACAGGCGGgaagaa > 1:14979622/1‑35 (MQ=255) atatAAAAAAACCCGCCCCTGACAGGCGGgaagaa > 1:17707846/1‑35 (MQ=255) atatAAAAAAACCCGCCCCTGACAGGCGGgaagaa > 1:15640144/1‑35 (MQ=255) taAAAAAACCCGCCCCTGACAGGCGGGGCGAAccg > 1:3313919/1‑33 (MQ=25) taAAAAAACCCACCCCTGACATGCGGGAAGAACgg > 1:12760808/1‑35 (MQ=38) aaaaaaacCCCGCCCCTGACAGGCGGGAAGAACgg < 1:13646869/34‑1 (MQ=255) aaaaaaacCCCGCCCCTGACAGGCGGGAAGAACgg < 1:1758360/34‑1 (MQ=255) aaaaaaacCCCGCCCCTGACAGGCGGGAAGAACgg < 1:15922468/34‑1 (MQ=255) aaaaaccCCCGCCCCTGACAGGCGGGAAGAACGGc < 1:17877370/35‑1 (MQ=37) aaaaaacCCCGCCcctgccggcatattcgaacgtc > 1:3654293‑M2/1‑13 (MQ=255) aaaaaacCCCGCCCCTGACAGGCGGGAAGAACGGc < 1:12849335/35‑1 (MQ=255) aaaaaacCCCGCCCCTGACAGGCGGGAAGAACGGc < 1:7022301/35‑1 (MQ=255) aaaaaaCCCGCCCCTGACAGGCGGGGAGAACGGCa > 1:9279343/1‑35 (MQ=255) aaaaaaCCCGCCCCTGACAGGCGGGAAGAACGGCa > 1:687166/1‑35 (MQ=255) aaaaaaCCCGCCCCTGACAGGCGGGAAGAAAGGCa > 1:18215473/1‑35 (MQ=255) aaaacCCCGCCCCTGACAGGCGGGAAGAACGGCaa < 1:17128340/35‑1 (MQ=255) aaaaaCCCGCCCCTGACAGGCGGGGAGAACGGCaa > 1:4295374/1‑35 (MQ=255) aaaaCCCGCCCCTGACAGGCGGGGAGGACCGGAAc > 1:16441545/1‑35 (MQ=19) aaaaCCCGCCCCTGACAGGCGGGAAGAACGGCAAc > 1:12696191/1‑35 (MQ=255) aaccccGCCCCTGACAGGCGGGAAGAAAGGCAACt < 1:16279416/32‑1 (MQ=37) aaCCCGCCCCTGACAGGCTGGGAGAACGGCAAATa > 1:3629413/1‑35 (MQ=25) aaCCCGCCCCTGACAGGCGGGAAGAACGGCAAATa > 1:6742290/1‑35 (MQ=255) aaCCCGCCCCTGACAGGCGGGAAGAACGGCAAATa > 1:5308083/1‑35 (MQ=255) aCCCGCCCCTGACAGGCGGGGAGAACGGCAACTaa > 1:5199058/1‑35 (MQ=255) aCCCGCCCCTGACAGGCGGGAAGAACGGCAACTaa > 1:12934117/1‑35 (MQ=255) aCCCCCCcctgccggcatattcgaacgtcatcttg > 1:16525653‑M2/1‑7 (MQ=255) cccCCCCCTGACAGGCGGGAAGAACGGCAACTaaa < 1:7154807/35‑1 (MQ=255) ccGCCCCTGACAGGCGGGAAGAACGGCAACTaaaa > 1:315194/1‑35 (MQ=255) cccccctgccggcatattcgaacgtcatcttgata > 1:1807498‑M2/3‑4 (MQ=255) cccccctgccggcatattcgaacgtcatcttgata > 1:15109733‑M2/3‑4 (MQ=255) cGCCCCTGACATGCGGGAAGAACGGCAACTAAAAc > 1:19343059/1‑35 (MQ=255) gCCCCTGACAGGCGGGAAGAACGGCAACTaaaaat > 1:13402568/1‑33 (MQ=255) gCCCCTGACAGGCGGGAAGAACGGCAACTAAAACt > 1:4063913/1‑35 (MQ=255) cccctgccggcatattcgaacgtcatcttgataaa > 1:10199156‑M2/1‑2 (MQ=255) ccccTGACAGGCGGGAAGAACGGCAAATAAAAAtt > 1:2299866/1‑35 (MQ=25) cccaTGCCAGGCGGGAAGAACGGCAACTAAAACtt < 1:15810829/35‑1 (MQ=37) ccctgccggcatattcgaacgtcatcttgataaag > 1:6065362‑M2/1‑1 (MQ=255) ccctgccggcatattcgaacgtcatcttgataaag > 1:20111443‑M2/1‑1 (MQ=255) ccctgccggcatattcgaacgtcatcttgataaag > 1:13105805‑M2/1‑1 (MQ=255) ccctgccggcatattcgaacgtcatcttgataaag > 1:11634500‑M2/1‑1 (MQ=255) cccTGACAGGCGGGGAGAACGGCAAATAAAACttt > 1:20570809/1‑35 (MQ=25) cccTGACAGGCGGGAAGACCGGCAACTAAAACttt < 1:18138219/35‑1 (MQ=255) | CGTTTGCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAAACTTT > REL606/4005683‑4005751 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |