New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2933125 = | 46 (0.450) | 11 (0.140) | 5/38 | NT | 16.9% | coding (1669/2874 nt) | gcvP | glycine dehydrogenase |
? | REL606 | = 3606341 | 72 (0.890) | coding (1517/2076 nt) | yhjG | predicted outer membrane biogenesis protein |
GTTATCAGCAGATGATTGCGCAGCTGGCTGACTGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2933163‑2933125 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggGGGAAATGAACGGTGACGCGGAACTACGCGGTAG < REL606/3606341‑3606308 tTTATCAGCAGATGATTGCGCAGCTGGCTGACTGG < 1:2655371/34‑1 GTTATCAGCAGATGATTGCGCAGCTGGCTGACTGG < 1:17554227/35‑1 GTTATCAGCAGATGATTGCGCAGCTGGCTGACTGG > 1:474105/1‑35 GTTATCAGCAGATGATTGCGCAGCTGGCTGACTGG < 1:19023444/35‑1 GTTATCAGCAGATGATTGCGCAGCTGGCTGACTGG < 1:3397982/35‑1 TTATCAGCAGATGATTGCGCAGCTTGCTGACTGGC > 1:15192802/1‑35 TTATCAGCAGATGATTGCGCAGCTGGCTGACTGGC < 1:16367681/35‑1 TTATCAGCAGATGATTGCGCAGCTGGCTGACTGGC > 1:7819892/1‑35 TTATCAGCAGATGATTGCGCAGCTGGCTGACTGGC > 1:1325901/1‑35 TATCAGCAGATGATTGCGCAGCTGGCTGACTGGCT < 1:11850120/35‑1 ATCAGCAGATGATTGCGCAGCTGGCTGACTGGCTt > 1:1716009/1‑34 ATCAGCAGATGATTGCGCAGCTGGCTGACTGGCTG < 1:19051688/35‑1 ATCAGCAGATGATTGCGCAGCTGGCTGACTGGCTG < 1:14550605/35‑1 ATCAGCAGATGATTGCGCAGCTGGCTGACTGGCTG < 1:19666843/35‑1 ATCAGCAGATGATTGCGCAGCTGGCTGACTGGCTG > 1:13477350/1‑35 ATCAGCAGATGATTGCGCAGCTGGCTGACTGGCTG > 1:392844/1‑35 ATCAGCAGATGATTGCGCAGCTGGCTGACTGGCTG > 1:6630539/1‑35 ATCAGCAGATGATTGCGCAGCTGGCTGACTGGCTG > 1:7462849/1‑35 TCAGCAGATGATTGCGCAGCTGGCTGACTGGCTGG < 1:1816815/35‑1 TCAGCAGATGATTGCGCAGCTGGCTGACTGGCTGG > 1:3594667/1‑35 TCAGCAGATGATTGCGCAGCTGGCTGACTGGCTGG > 1:12092629/1‑35 TCAGCAGATGATTGCGCAGCTGGCTGACTGGCTGG > 1:14779836/1‑35 catCAGATGATTGCGCAGCTGGCTGACTGGCTGGG > 1:11894175/4‑35 CAGCAGATGATTGCGCAGCTGGCTGACTGGCTGGG > 1:13926442/1‑35 CAGCAGATGATTGCGCAGCTGGCTGACTGGCTGGG > 1:308681/1‑35 CAGCAGATGATTGCGCAGCTGGCTGACTGGCTGGG > 1:1317581/1‑35 CAGCAGATGATTGCGCAGCTGGCTGACTGGCTGGG > 1:5463945/1‑35 CAGCAGATGATTGCGCACCTGGCTGACTGGCTGGG > 1:625915/1‑35 AGCAGATGATTGCGCAGCTGGCTGACTGGCTGGGG > 1:18782744/1‑35 AGCAGATGATTGCGCAGCTGGCTGACTGGCTGGGG > 1:17601446/1‑35 AGCAGATGATTGCGCAGCTGGCTGACTGGCTGGGG > 1:9879935/1‑35 AGCAGATGATTGCGCAGCTGGCTGACTGGCTGGGG > 1:14260349/1‑35 AGCAGATGATTGCGCAGCTGGCTGACTGGCTGGGG > 1:1119316/1‑35 AGCAGATGATTGCGCAGCTGGCTGACTGGCTGGGG > 1:16159638/1‑35 GCAGATGATTGCGCAGCTGGCTGACTGGCTGGGGG > 1:2944552/1‑35 CAGATGATTGCGCAGCTGGCTGACTGGCTGGGGGg > 1:18564719/1‑34 CAGATGATTGCGCAGCTGGCTGACTGGCTGGGGGg > 1:6543773/1‑34 AGATGATTGCGCAGCTGGCTGACTGGCTGGGGGga > 1:14195366/1‑33 AGATGATTGCGCAGCTGGCTGACTGGCTGGGGGAA > 1:15717118/1‑35 GATGATTGCGCAGCTGGCTGACTGGCTGGGGGGAA > 1:11991277/1‑35 GATGATTGCGCAGCTGGCTGACTGGCTGGGGGGAA > 1:11149468/1‑35 GATGATTGCGCAGCTGGCTGACTGGCTGGGGGAAA > 1:5939026/1‑35 ATGATTGCGCAGCTGGCTGACTGGCTGGGGGAAct > 1:11580060/1‑33 TGATTGCGCAGCTGGCTGACTGGCTGGGGGGAATG > 1:17389041/1‑35 TGATTGCGCAGCTGGCTGACTGGCTGGGGGGAATG > 1:9590642/1‑35 GATTGCGCAGCTGGCTGACTGGCTGGGGGGAATGA > 1:148617/1‑35 GATTGCGCAGCTGGCTGACTGGCTGGGGGGAATGA > 1:7720813/1‑35 GATTGCGCAGCTGGCTGACTGGCTGGGGGAAATGg > 1:13295448/1‑34 GATTGCGCAGCTGGCTGACTGGCTGGGGGAAATGA > 1:658751/1‑35 ATTGCGCAGCTGGCTGACTGGCTGGGGGAAATGAA > 1:6810551/1‑35 TTGCGCAGCTGGCTGACTGGCTGGGGGGAATGAAC > 1:10062150/1‑35 GCTGGGGGAAATGAACGGTGACGCGGAACTACGCG > 1:10897613/1‑35 GCTGGGGGAAATGAACGGTGACGCGGAACTACGCG > 1:16448183/1‑35 GCTGGGGGAAATGAACGGTGACGCGGAACTACGCG < 1:16864170/35‑1 cttGGGGAAATGAACGGTGACGCGGAACTACGCGG > 1:5482577/4‑35 CTGGGGGAAATGAACGGTGACGCGGAACTACGCGG > 1:754549/1‑35 CTGGGGGAAATGAACGGTGACGCGGAACTACGCGG > 1:5011570/1‑35 CTGGGGGAAATGAACGGTGACGCGGAACTACGCGG > 1:11245360/1‑35 CTGGGGGAAATGAACGGTGACGCGGAACTACGCGG > 1:16277549/1‑35 CTGGGGGAAATGAACGGTGACGCGGAACTACGCGG > 1:18218285/1‑35 TGGGGGAAATGAACGGTGACGCGGAACTACGCGGT < 1:8397690/35‑1 TGGGGGAAATGAACGGTGACGCGGAACTACGCGGT > 1:1636007/1‑35 TGGGGGAAATGAACGGTGACGCGGAACTACGCGGT > 1:16064724/1‑35 TGGGGGAAATGAACGGTGACGCGGAACTACGCGGT > 1:4308732/1‑35 GGGGGAAATGAACGGTGACGCTGAACTACGCGGTA > 1:13250517/1‑35 GGGGGAAATGAACGGTGACGCGGAACTACGCGGTA < 1:2983306/35‑1 GGGGGAAATGAACGGTGACGCGGAACTACGCGGTA > 1:10361801/1‑35 GGGGGAAATGAACGGTGACGCGGAACTACGCGGTA < 1:16558874/35‑1 GGGGGAAATGAACGGTGACGCGGAACTACGCGGTA > 1:9733214/1‑35 GGGGAAATGAACGGTGACGCGGAACTACGCGGTAG < 1:14784399/35‑1 GGGGAAATGAACGGTGACGCGGAACTACGCGGTAG < 1:4051884/35‑1 GGGGAAATGAACGGTGACGCGGAACTACGCGGTAG < 1:16581438/35‑1 GGGGAAATGAACGGTGACGCGGAACTACGCGGTAG < 1:12625134/35‑1 GGGGAAATGAACGGTGACGCGGAACTACGCGGTAG > 1:3758699/1‑35 GTTATCAGCAGATGATTGCGCAGCTGGCTGACTGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2933163‑2933125 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggGGGAAATGAACGGTGACGCGGAACTACGCGGTAG < REL606/3606341‑3606308 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |