New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3676501 | 106 (1.030) | 13 (0.130) | 7/46 | NT | 12.1% | coding (1242/1278 nt) | yiaN | predicted transporter |
? | REL606 | = 3822225 | 91 (0.890) | coding (203/1323 nt) | glvG | predicted 6‑phospho‑beta‑glucosidase |
TTTGTTTTTATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3676487‑3676501 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCACCGATCCTGAAGTAGCGTTCAGCGACGTTGA < REL606/3822225‑3822192 | TTTGTTTTTATTCCCCCCACCGATCCTGAAGTAGC < 1:6595206/35‑1 TTGTTTTTATTCCCCCCACCGATCCTGAAGTAGCG < 1:20530198/35‑1 TGTTTTTCTTCCCCCCACCGATCCTGAAGTAGCGT < 1:12811314/35‑1 TGTTTTTATTCCCCCCACCGATCCTGAAGTAGCGT < 1:4635597/35‑1 TGTTTTTATTCCCCCCACCGATCCTGAAGTAGCGT < 1:3339658/35‑1 TGTTTTTAGTCCCCCCACCGATCCTGAAGTAGCGT < 1:19036717/35‑1 TTTTATTCCCCCCACCGATCCTGAAGTAGCGTTCA < 1:7835771/35‑1 TTTTAGTCCCCCCACCGATCCTGAAGTAGCGTTCA < 1:55787/35‑1 TTTATTCCCCCCACCGATCCTGAAGTAGCGTTCAG < 1:1998616/35‑1 TTTATTCCCCCCACCGATCCTGAAGTAGCGTTCAG < 1:1075665/35‑1 TTTATTCCCCCAACCGATCCTGAAGTAGCGTTCAG < 1:17846903/35‑1 TTACTCCCCCCACCGATCCTGAAGTAGCGTTCAGC < 1:6785496/35‑1 ataCCCCCCACCGATCCTGAAGTAGCGTTCAGCGA < 1:645523/32‑1 acTCCCCCCACCGATCCTGAAGTAGCGTTCAGCGA < 1:19719489/33‑1 ATTCCCCCCACCGATCCTGAAGTAGCGTTCAGCGA < 1:2129155/35‑1 tcCCCCCCACCGATCCTGAAGTAGCGTTCAGCGAC < 1:530208/33‑1 gcCCCCCCACCGATCCTGAAGTAGCGTTCAGCGAC < 1:19011953/33‑1 cCCCCCCACCGATCCTGAAGTAGCGTTCAGCGACG < 1:8193897/34‑1 cCCCCCCACCGATCCTGAAGTAGCGTTCAGCGACG < 1:4474945/34‑1 CCCCCCACCGATCCTGAAGTAGCGTTCAGCGACGT < 1:9421718/35‑1 CCCCCCACCGATCCTGAAGTAGCGTTCAGCGACGT < 1:1986901/35‑1 CCCCCCACCGATCCTGAAGTAGCGTTCAGCGACGT < 1:13357283/35‑1 CCCCCACCGATCCTGAAGTAGCGTTCAGCGACGTT < 1:6362945/35‑1 CCCCCACCGATCCTGAAGTAGCGTTCAGCGACGTT < 1:2135200/35‑1 CCCCCACCGATCCTGAAGTAGCGTTCAGCGACGTT < 1:13042206/35‑1 CCCCCACCGATCCTGAAGTAGCGTTCAGCGACGTT < 1:868682/35‑1 CCCCCACCGATCCTGAAGTAGCGTTCAGCGACGTT < 1:10310554/35‑1 CCCCACCGATCCTGAAGTAGCGTTCAGCGACGTTG < 1:14979524/35‑1 CCCACCGATCCTGAAGTAGCGTTCAGCGACGTTGA < 1:5862645/35‑1 CCCACCGATCCTGAAGTAGCGTTCAGCGACGTTGA < 1:8113231/35‑1 | TTTGTTTTTATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3676487‑3676501 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCACCGATCCTGAAGTAGCGTTCAGCGACGTTGA < REL606/3822225‑3822192 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |