New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1686611 | 82 (0.800) | 12 (0.120) | 3/48 | NT | 15.0% | coding (276/1059 nt) | rnfD | electron transport complex protein RnfD |
? | REL606 | = 4059472 | 54 (0.530) | coding (536/636 nt) | fdoI | formate dehydrogenase‑O, cytochrome b556 subunit |
CCCCCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1686604‑1686611 ‑‑‑‑‑‑‑‑CCGCCATGGTGGAAGGATGGGTTACCAGCGCCTG < REL606/4059472‑4059439 cgCCCCTCCCGCCATGGTGGAAGGATGGGTTACCA < 1:10110480/33‑1 CCCCCCCCCCGCCATGGTGGAAGGATGGGTTACCA < 1:8312670/35‑1 CCCCCCCCCCGCCATGGTGGAAGGATGGGTTACCA < 1:3705047/35‑1 CCCCCCCCCCGCCATGGTGGAAGGATGGGTTACCA < 1:2123004/35‑1 CCCCCCCCCCGCCATGGTGGAAGGATGGGTTACCA < 1:12379775/35‑1 CCCCCCCCCCGCCATGGTGGAAGGATGGGTTACCA < 1:12278073/35‑1 CCCCCCCCCGCCATGGTGGAAGGATGGGTTACCAG < 1:15376147/35‑1 CCCCCCCCCGCCATGGTGGAAGGATGGGTTACCAG < 1:16028348/35‑1 CCCCCCCCCGCCATGGTGGAAGGATGGGTTACCAG < 1:5441170/35‑1 CCCCCCCCCGCCATGGTGGAAGGATGGGTTACCAG < 1:3206622/35‑1 CCCCCCCCGCCATGGTGGAAGGATGGGTTACCAGC < 1:1263025/35‑1 CCCCCCCCGCCATGGTGGAAGGATGGGTTACCAGC < 1:633570/35‑1 CCCCCCCGCCATGGTGGAAGGATGGGTTACCAGCG < 1:11045772/35‑1 CCCCCCCGCCATGGTGGAAGGATGGGTTACCAGCG < 1:7236858/35‑1 CCCCCCCGCCATGGTGGAAGGATGGGTTACCAGCG < 1:11453688/35‑1 CCCCCCCGCCATGGTGGAAGGATGGGTTACCAGCG < 1:15537221/35‑1 ctcCCCGCCATGGTGGAAGGATGGGTTACCAGCGC < 1:20496468/32‑1 cccCCCGCCATGGTGGAAGGATGGGTTACCAGCGC < 1:2315696/32‑1 cccCCCGCCATGGTGGAAGGATGGGTTACCAGCGC < 1:17377378/32‑1 caCCCGCCATGGTGGAAGGATGGGTTACCAGCGCC < 1:18879660/33‑1 CTCCCGCCATGGTGGAAGGATGGGTTACCAGCGCC < 1:4174932/35‑1 cCCCGCCATGGTGGAAGGATGGGTTACCAGCGCCT < 1:4587988/34‑1 CCCGCCATGGTGGAAGGATGGGTTACCAGCGCCTG < 1:5382235/35‑1 CCCGCCATGGTGGAAGGATGGGTTACCAGCGCCTG < 1:12438664/35‑1 CCCCCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1686604‑1686611 ‑‑‑‑‑‑‑‑CCGCCATGGTGGAAGGATGGGTTACCAGCGCCTG < REL606/4059472‑4059439 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |