New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 594300 = | 32 (0.310) | 8 (0.110) | 5/34 | NT | 13.7% | coding (902/2241 nt) | fepA | iron‑enterobactin outer membrane transporter |
? | REL606 | = 3534924 | 78 (1.070) | coding (8/1497 nt) | ftsY | fused Signal Recognition Particle (SRP) receptor: membrane binding protein/conserved protein |
Only 100 of 200 total aligned reads displayed.
GCCCAGCCAGGAAAAAAAGCCACGTTTTTTTTCTTTCGCCATTTGCGACTACACTCCTCGCTGTTGCTT > REL606/3534890‑3534958 | gCCCAGCCAGGAAAAAAAGCCACGTTTTTtttctt < 1:9700926/35‑1 (MQ=255) ccccAGCCAGGAAAAAAAGCCACGTTTTTtttctt < 1:171219/34‑1 (MQ=255) cccAGCCAGGAAAAAAAGCCACGTTTTTTTTCTTt < 1:25913‑M2/35‑2 (MQ=255) cccAGCCAGGAAAAAAAGCCACGTTTTTTTTCTTt < 1:20319642‑M2/35‑2 (MQ=255) cccAGCCAGGAAAAAAAGCCACGTTTTTTTTCTTt < 1:4191817‑M2/35‑2 (MQ=255) cccAGCCAGGAAAAAAAGCCACGTTTTTTTTCTTt > 1:4397905‑M2/1‑34 (MQ=255) ccagccggGAAAAAAAGCCACGTTTTTTTTCTTtc > 1:16208497‑M2/1‑33 (MQ=255) cagccagGAAAAAAAGCCACGTTTTTTTTCTTtcg < 1:16355989‑M2/35‑4 (MQ=255) agccagGAAAAAAAGCCACGTTTTTTTTCTTtcgc < 1:1509726‑M2/35‑5 (MQ=255) agccagGAAAAAAAGCCACGTTTTTTTTCTTtcgc > 1:3759764‑M2/1‑31 (MQ=255) gccagGAAAAAAAGCCACGTTTTTTTTCTTtcgcc > 1:15118720‑M2/1‑30 (MQ=255) gccagGAAAAAAAGCCACGTTTTTTTTCTTtcgcc > 1:3603600‑M2/1‑30 (MQ=255) gccagGAAAAAAAGCCACGTTTTTTTTCTTtcgcc > 1:18011728‑M2/1‑30 (MQ=255) ccagGAAAAAAAGCCACGTTTTTTTTCTTtcgcca > 1:6090654‑M2/1‑29 (MQ=255) ccagGAAAAAAAGCCACGTTTTTTTTCTTtcgcca > 1:4613755‑M2/1‑29 (MQ=255) ccagGAAAAAAAGCCACGTTTTTTTTCTTtcgcca < 1:19379184‑M2/35‑7 (MQ=255) ccagGAAAAAAAGCCACGTTTTTTTTCTTtcgcca > 1:10293839‑M2/1‑29 (MQ=255) ccagGAAAAAAAGCCACGTTTTTTTTCTTtcgcca < 1:3468440‑M2/35‑7 (MQ=255) cagGAAAAAAAGCCACGTTTTTTTTCTTtcgccat < 1:19270934‑M2/35‑8 (MQ=255) cagGAAAAAAAGCCACGTTTTTTTTCTTtcgccat > 1:1855095‑M2/1‑28 (MQ=255) cagGAAAAAAAGCCACGTTTTTTTTCTTtcgccat < 1:814584‑M2/35‑8 (MQ=255) cagGAAAAAAAGCCACGTTTTTTTTCTTtcgccat < 1:15297502‑M2/35‑8 (MQ=255) cagGAAAAAAAGCCACGTTTTTTTTCTTtcgccat < 1:3206793‑M2/35‑8 (MQ=255) cagAAAAAAAAGCCACGTTTTTTTTCTTtcgccat > 1:3796459‑M2/1‑28 (MQ=255) agaaaaaaaaGCCACGTTTTTTTTCTTTCGCCAtt < 1:15630566/32‑1 (MQ=255) agGAAAAAAAGCCACGTTTTTTTTCTTTCGCCAtt > 1:16553326/1‑35 (MQ=255) ggAAAAAAAGCCACGTTTTTTTTCTTTCGCCAttt < 1:8768176/35‑1 (MQ=255) gAAAAAAAGCCACGTTTTTTTTCTTTCGCCATTTg < 1:13100615/35‑1 (MQ=255) gAAAAAAAGCCACGTTTTTTTTCTTTCGCCATTTg > 1:15325106/1‑35 (MQ=255) aaaaaaaaGCCACGTTTTTTTTATTTCGCCATTTg < 1:4830969/34‑1 (MQ=255) aaaaaaaGCCACGTTTTTTTTCTTTCGCCATTTGc > 1:19624506/1‑35 (MQ=255) aaaaaaaGCCACGTTTTTTTTCTTTCGCCATTTGc > 1:5415817/1‑35 (MQ=255) aaaaaaaGCCACGTTTTTTTTCTTTCGCCATTTGc > 1:4789539/1‑35 (MQ=255) aaaaaaaGCCACGTTTTTTTTCTTTCGCCATTTGc < 1:20555812/35‑1 (MQ=255) aaaaaaaGCCACGTTTTTTTTCTTTCGCCATTTGc > 1:20443776/1‑35 (MQ=255) aaaaaaGCCACGTTTTTTTTCTTTCGCCATTTGCg < 1:11540230/35‑1 (MQ=255) aaaaaaGCCACGTTTTTTTTCTTTCGCCATTTGCg < 1:142783/35‑1 (MQ=255) aaaaaGCCACGTTTTTTTTCTTTCGCCATTTGCGa > 1:12489823/1‑35 (MQ=255) aaaGCCACGTTTTTTTTCTTTCGCCATTTGCGACt < 1:2680165/35‑1 (MQ=255) aaaGCCACGTTTTTTTTCTTTCGCCATTTGCGACt > 1:9390578/1‑35 (MQ=255) aaGCCACGTTTTTTTTCTTTCGCCATTTGCGACTa > 1:2029104/1‑35 (MQ=255) aaGCCACGTTTTTTTTCTTTCGCCATTTGCGACTa > 1:20022285/1‑35 (MQ=255) aaGCCACGTTTTTTTTCTTTCGCCATTTGCGACTa > 1:14562314/1‑35 (MQ=255) aGCCACGTTTTTTTTCTTTCGCCATTTGCGACTac < 1:1988222/35‑1 (MQ=255) aGCCACGTTTTTTTTCTTTCGCCATTTGCGACTac > 1:10597432/1‑35 (MQ=255) aGCCACGTTTTTTTTCTTTCGCCATTTGCGACTac < 1:14704816/35‑1 (MQ=255) aGCCACGTTTTTTTTCTTTCGCCATTTGCGACTac < 1:11089393/35‑1 (MQ=255) aGCCACGTTTTTTTTCTTTCGCCATTTGCGACTac < 1:7703930/35‑1 (MQ=255) gCCACGTTTTTTTTCTTTCGCCATTTGCGACTaca < 1:15463883/35‑1 (MQ=255) ccACGTTTTTTTTCTTTCGCCATTTGCGACTacac < 1:17959755/35‑1 (MQ=255) ccACGTTTTTTTTCTTTCGCCATTTGCGACTacac < 1:1406283/35‑1 (MQ=255) ccACGTTTTTTTTCTTTCGCCATTTGCGACTacac < 1:17244028/35‑1 (MQ=255) ccACGTTTTTTTTCTTTCGCCATTTGCGACTacac > 1:11919245/1‑35 (MQ=255) cACGTTTTTTTTCTTTCGCCATTTGCGACTACAct > 1:15009057/1‑35 (MQ=255) aCGTTTTTTTTCTTTCGCCATTTGCGACTACActc > 1:14653763/1‑35 (MQ=255) aCGTTTTTTTTCTTTCGCCATTTGCGACTACActc < 1:5183058/35‑1 (MQ=255) aCGTTTTTTTTCTTTCGCCATTTGCGACTACActc < 1:17011544/35‑1 (MQ=255) cGTTTTTTTTCTTTCGCCATTTGCGACTACActcc > 1:13815946/1‑35 (MQ=255) gTTTTTTTTCTTTCGCCATTTGCGACTACActcct < 1:19738201/35‑1 (MQ=255) gTTTTTTTTCTTTCGCCATTTGCGACTACActcct > 1:18257863/1‑35 (MQ=255) ttttttttTTTtcgccatatttcgagcgggtatag > 1:9648395‑M2/1‑11 (MQ=255) ttttttttCTTTCGCCATTTGCGACTACActcctc < 1:5543629/35‑1 (MQ=255) ttttttttCTTTCGCCATTTGCGACTACActcctc < 1:16829906/35‑1 (MQ=255) ttttttttCTTTCGCCATTTGCGACTACActcctc < 1:19970917/35‑1 (MQ=255) tttttttTTTtcgccatatttcgagcgggtatagg > 1:3879818‑M2/1‑10 (MQ=255) tttttttCTTTCGCCATTTGCGACTACACTCCTCg > 1:9041328/1‑35 (MQ=255) tttttttCTTTCGCCATTTGCGACTACACTCCTCg < 1:12166399/35‑1 (MQ=255) tttttttCTTTCGCCATTTGCGACTACACTCCTCg < 1:13578796/35‑1 (MQ=255) tttttttCTTTCGCCATTTGCGACTACACTCCTCg > 1:1318598/1‑35 (MQ=255) tttttttCTTTCGCCATTTGCGACTACACTCCTCg > 1:3390133/1‑35 (MQ=255) ttttttTTTtcgccatatttcgagcgggtatagga > 1:11228723‑M2/1‑9 (MQ=255) ttttttCTTTCGCCATTTGCGACTACACTCCTCGc > 1:10001684/1‑35 (MQ=255) ttttttCTTTCGCCATTTGCGACTACACTCCTCGc < 1:12880274/35‑1 (MQ=255) tttttTTTtcgccatatttcgagcgggtataggaa > 1:11204005‑M2/1‑8 (MQ=255) tttttCTTTCGCCATTTGCGACTACACTCCTCGCt > 1:1951723/1‑35 (MQ=255) ttttCTTTCGCCATTTGCGACTACACTCCTCGCTg > 1:10660458/1‑35 (MQ=255) ttttCTTTCGCCATTTGCGACTACACTCCTCGCTg < 1:8413061/35‑1 (MQ=255) tttttttcgccatatttcgagcgggtataggaatc > 1:10483898‑M2/1‑6 (MQ=255) tttttttcgccatatttcgagcgggtataggaatc > 1:6569074‑M2/1‑6 (MQ=255) tttctttcGCCATTTGCGACTACACTCCTCGCTGt > 1:17909256/1‑35 (MQ=255) tttctttcGCCATTTGCGACTACACTCCTCGCTGt < 1:7345265/35‑1 (MQ=255) tttctttcGCCATTTGCGACTACACTCCTCGCTGt < 1:7005218/35‑1 (MQ=255) tttctttcGCAATTTGCGACTACACTCCTCGCTGt < 1:17481873/35‑1 (MQ=255) ttttttcgccatatttcgagcgggtataggaatcg > 1:5445805‑M2/1‑5 (MQ=255) ttttttcgccatatttcgagcgggtataggaatcg > 1:2727194‑M2/1‑5 (MQ=255) ttctttcGCCATTTGCGACTACACTCCTCGCTGtt > 1:18742873/1‑35 (MQ=255) tttttcgccatatttcgagcgggtataggaatcgg > 1:1750447‑M2/3‑4 (MQ=255) tttttcgccatatttcgagcgggtataggaatcgg > 1:16297001‑M2/3‑4 (MQ=255) tctttcGCCATTTGCGACTACACTCCTCGCTGTTg > 1:810162/1‑35 (MQ=255) tctttcGCCATTTGCGACTACACTCCTCGCTGTTg > 1:6247001/1‑35 (MQ=255) tctttcGCCATTTGCGACTACACTCCTCGCTGTTg > 1:14244662/1‑35 (MQ=255) ttttcgccatatttcgagcgggtataggaatcgga > 1:12294432‑M2/2‑3 (MQ=255) ttttcgccatatttcgagcgggtataggaatcgga > 1:16758680‑M2/2‑3 (MQ=255) ctttcGCCATTTGCGACTACACTCCTCGCTGTTGc > 1:11432725/1‑35 (MQ=255) ctttcGCCATTTGCGAATACACTCCTCGCTGTTGc < 1:5057005/35‑1 (MQ=255) tttcGCCATTTGCGACTACACTCCTCGCTGTTGCt < 1:19140793/35‑1 (MQ=255) tttcGCCATTTGCGACTACACTCCTCGCTGTTGCt < 1:2992278/35‑1 (MQ=255) ttcGCCATTTGCGACTACACTCCTCGCTGTTGCtt > 1:7515795/1‑35 (MQ=255) ttcGCCATTTGCGACTACACTCCTCGCTGTTGCtt > 1:15735662/1‑35 (MQ=255) ttcGCCATTTGCGACTACACTCCTCGCTGTTGCtt < 1:2541822/35‑1 (MQ=255) | GCCCAGCCAGGAAAAAAAGCCACGTTTTTTTTCTTTCGCCATTTGCGACTACACTCCTCGCTGTTGCTT > REL606/3534890‑3534958 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |