New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 741667 = | 102 (0.990) | 24 (0.310) | 5/36 | NT | 25.9% | coding (2171/2802 nt) | sucA | alpha‑ketoglutarate decarboxylase |
? | REL606 | = 1476120 | 81 (0.790) | coding (71/1176 nt) | ydcO | predicted benzoate transporter |
Only 100 of 144 total aligned reads displayed.
ACAATCGCTGCTTGCCAGATTATTGCCGCTGAACTGGCGTAGCCAATTAATACCGCCAGAAACCCCGC > REL606/1476087‑1476154 | tctaTCGCTGCTTGCCAGATTATTGCCGCTGAACt < 1:15370090/32‑1 (MQ=255) aCAATCGCTGCTTGCCAGATTATTGCCGCTGAACt < 1:3814427/35‑1 (MQ=255) aCAATCGCTGCTTGCCAGATTATTGCCGCTGAACt < 1:16851599/35‑1 (MQ=255) cAATCGCTGCTTGCCAGATTATTGCCGCTGAACTg < 1:10808811/35‑1 (MQ=255) cAATCGCTGCTTGCCAGATTATTGCCGCTGAACTg < 1:19993951/35‑1 (MQ=255) cAATCGCTGCTTGCCAGATTATTGCCGCTGAACTg > 1:5695518/1‑35 (MQ=255) cAATCGCTGCTTGCCAGATTATTGCCGCTGAACTg < 1:11517769/35‑1 (MQ=255) cAATCGCTGCTTGCAAGATTATTGCCGCTGAACTg < 1:16367154/35‑1 (MQ=255) aaTCGCTGCTTGCCAGATTATTGCCGCTGAACTgg < 1:12656965/35‑1 (MQ=255) gccGCTGCTTGCCAGATTATTGCCGCTGAACTGGc < 1:2608726/33‑1 (MQ=255) aTCGCTGCTTGCCAGATTATTGCCGCTGAACTGGc > 1:8142142/1‑35 (MQ=255) aTCGCTGCTTGCCAGATTATTGCCGCTGAACTGGc < 1:4463758/35‑1 (MQ=255) aTCGCTGCTTGCCAGATTATTGCCGCTGAACTGGc < 1:13141651/35‑1 (MQ=255) aTCGCTGCTTGCCAGATTATTGCCGCTGAACTGGc < 1:7319709/35‑1 (MQ=255) aTCGCTGCTTGCCAGATTATTGCCGCTGAACTGGc > 1:8691071/1‑35 (MQ=255) aTCGCTGCTTGCCAGATTATTGCCGCTGAACTGGc > 1:11891981/1‑35 (MQ=255) tCGCTGCTTGCCAGATTATTGCCGCTGAACTGGCg < 1:15905155/35‑1 (MQ=255) cGCTGCTTGCCAGATTATTGCCGCTGAACTGGCGt < 1:7451878/35‑1 (MQ=255) cGCTGCTTGCCAGATTATTGCCGCTGAACTGGCGt < 1:8781863/35‑1 (MQ=255) gctgctTGCCAGATTATTGCCGCTGAACTGGCGTa < 1:12078580/35‑1 (MQ=255) ctgctTGCCAGATTATTGCCGCTGAACTGGCGTAg > 1:3627140/1‑35 (MQ=255) ctgctTGCCAGATTATTGCCGCTGAACTGGCGTAg < 1:16067023/35‑1 (MQ=255) ctgctTGCCAGATTATTGCCGCTGAACTGGCGTAg > 1:1184129/1‑35 (MQ=255) tgctTGCCAGATTATTGCCGCTGAACTGGCGTAGc < 1:15578131/35‑1 (MQ=255) tgctTGCCAGATTATTGCCGCTGAACTGGCGTAGc > 1:14313383/1‑35 (MQ=255) gctTGCCAGATTATTGCCGCTGAACTGGCGTAGcc > 1:7867693/1‑35 (MQ=255) gctTGCCAGATTATTGCCGCTGAACTGGCGTAGcc > 1:14653297/1‑35 (MQ=255) ctTGCCAGATTATTGCCGCTGAACTGGCGTAGCCa > 1:7656432/1‑35 (MQ=255) ttGCCAGATTATTGCCGCTGAACTGGCGTAGCCaa > 1:18970141/1‑35 (MQ=255) ttGCCAGATTATTGCCGCTGAACTGGCGTAGCCaa > 1:3243288/1‑35 (MQ=255) ttGCCAGATTATTGCCGCTGAACTGGCGTAGCCaa > 1:1795026/1‑35 (MQ=255) ttGCCAGATTATTGCCGCTGAACTGGCGTAGCCaa > 1:18218432/1‑35 (MQ=255) tGCCAGATTATTGCCGCTGAACTGGCGTAGCCAAt > 1:7769795/1‑35 (MQ=255) tGCCAGATTATTGCCGCTGAACTGGCGTAGCCAAt > 1:1865996/1‑35 (MQ=255) caccagATTATTGCCGCTGAACaacaacggcaggg < 1:10926945‑M2/33‑14 (MQ=255) caccagATTATTGCCGCTGAACaacaacggcaggg < 1:7406187‑M2/33‑14 (MQ=255) caccagATTATTGCCGCTGAACaacaacggcaggg < 1:13154311‑M2/33‑14 (MQ=255) caccagATTATTGCCGCTGAACaacaacggcaggg < 1:9579786‑M2/33‑14 (MQ=255) caccagATTATTGCCGCTGAACaacaacggcaggg < 1:16705236‑M2/33‑14 (MQ=255) gCCAGATTATTGCCGCTGAACTGGCGTAGCCAAtt > 1:18766819/1‑35 (MQ=255) gCCAGATTATTGCCGCTGAACTGGCGTAGCCAAtt > 1:19276293/1‑35 (MQ=255) accaGATTATTGCCGCTGAACaacaacggcagggg < 1:16407744‑M2/34‑15 (MQ=255) accaGATTATTGCCGCTGAACaacaacggcagggc < 1:2759880‑M2/34‑15 (MQ=255) ccAGATTATTGCCGCTGAACaacaacggcaggggc < 1:4985138‑M2/35‑16 (MQ=255) ccAGATTATTGCCGCTGAACaacaacggcagggcc < 1:402283‑M2/35‑16 (MQ=255) ccAGATTATTGCCGCTGAACaacaacggcaggcgc < 1:3954015‑M2/35‑16 (MQ=255) ccAGATTATTGCCGCTGAACTGGCGTAGCCAATTa > 1:2995538/1‑35 (MQ=255) ccAGATTATTGCCGCTGAACTGGCGTAGCCAATTa > 1:2106678/1‑35 (MQ=255) cAGATTATTGCCGCTGAACaacaacggcaggggcc < 1:8215369‑M2/35‑17 (MQ=255) cAGATTATTGCCGCTGAACaacaacggcaggggcc < 1:8683079‑M2/35‑17 (MQ=255) cAGATTATTGCCGCTGAACTGGCGTAGCCAATTaa > 1:9893658/1‑35 (MQ=255) cAGATTATTGCCGCTGAACTGGCGTAGCCAATTaa > 1:19423630/1‑35 (MQ=255) cAGATTATTGCCGCTGAACTGGCGTAGCCAATTaa > 1:8371222/1‑35 (MQ=255) aaatttttGCCGCTGAACTGGCGTAGCCAATTAAt < 1:2682756/33‑1 (MQ=25) aGATTATTGCGGCTGAACTGGCGTAGCCAATTAAt < 1:52918/35‑1 (MQ=255) aGATTATTGCCGCTGAACaacaacggcaggggccg < 1:20020974‑M2/35‑18 (MQ=255) aGATTATTGCCGCTGAACTGGCGTAGCCAATTAAt > 1:6112777/1‑35 (MQ=255) aGATTATTGCCGCTGAACTGGCGTAGCCAATTAAt > 1:10828759/1‑35 (MQ=255) gATTATTGCCGCTGAACaacaacggcaggggcccc < 1:17568907‑M2/35‑19 (MQ=255) gATTATTGCCGCTGAACaacaacggcagggcccgg < 1:45607‑M2/35‑19 (MQ=255) gATTATTGCCGCTGAACTGGCGTAGCCAATTAATa > 1:19773358/1‑35 (MQ=255) gATTATTGCCGCTGAACTGGCGTAGCCAATTAATa > 1:15603635/1‑35 (MQ=255) atttttGCCGCTGAACTGGCGTAGCCAATTAATAc < 1:527895/35‑1 (MQ=255) attattGCCGCTGAACaacaacggcaggggctgga < 1:20123354‑M2/35‑20 (MQ=255) attattGCCGCTGAACaacaacggcaggggccgga < 1:5857886‑M2/35‑20 (MQ=255) attattGCCGCTGAACaacaacggcagggcccgga < 1:841073‑M2/35‑20 (MQ=255) attattGCCGCTGAACTGGCGTAGCCAATTAATAc > 1:2477260/1‑35 (MQ=255) attattGCCGCTGAACTGGCGTAGCCAATTAATAc > 1:976983/1‑35 (MQ=255) attattGCCGCTGAACTGGCGTAGCCAATTAATAc > 1:18663397/1‑35 (MQ=255) attattGCCGCTGAACTGGCGTAGCCAATTAATAc > 1:6879092/1‑35 (MQ=255) attattGCCGCTGAACTAGCGTAGCCAATTAATAc > 1:14678166/1‑35 (MQ=255) ttattGCCGCTGAACTGGCGTAGCCAATTAATaac > 1:9103628/1‑33 (MQ=255) ttattGCCGCTGAACTGGCGTAGCCAATTAATAcc > 1:3601919/1‑35 (MQ=255) ttattGCCGCTGAACTGGCGTAGCCAATTAATAcc > 1:11908005/1‑35 (MQ=255) tattGCCGCTGAACaacaacggcaggggccggaac < 1:18596170‑M2/35‑22 (MQ=255) tattGCCGCTGAACTGGCGTAGCCAATTAATACCg > 1:9674576/1‑35 (MQ=255) tattGCCGCTGAACTGGCGTAGCCAATTAATACCg < 1:9211083/35‑1 (MQ=255) tattGCCGCTGAACTGGCGTAGCCAATTAATACCg > 1:5528068/1‑35 (MQ=255) attGCCGCTGAACaacaacggcaggggccggaaca < 1:7661950‑M2/35‑23 (MQ=255) attGCCGCTGAACTGGCGTAGCCAATTAATACCGc > 1:17924837/1‑35 (MQ=255) ttGCCGCTGAACTGGCGTAGCCAATTAATACCGcc > 1:19338271/1‑35 (MQ=255) ttGCCGCTGAACTGGCGTAGCCAATTAATACCGcc > 1:10639540/1‑35 (MQ=255) tGCCGCTGAACTGGCGTAGCCAATTAATACCGCCa > 1:10151872/1‑35 (MQ=255) gCCGCTGAACTGGCGTAGCCAATTAATACCGCCAg > 1:11533157/1‑35 (MQ=255) gCCGCTGAACTGGCGTAGCCAATTAATACCGCCAg > 1:5164579/1‑35 (MQ=255) cGCTGAACTGGCGTAGCCAATTAATACCGCCAGaa > 1:13807032/1‑35 (MQ=255) cGCTGAACTGGCGTAGCCAATTAATACCGCCAGaa > 1:6099405/1‑35 (MQ=255) gCTGAACTGGCGTAGCCAATTAATACCGCCAGaaa > 1:12879867/1‑35 (MQ=255) cTGAACTGGCGTAGCCAATTAATACCGCCAGAAAc > 1:6202425/1‑35 (MQ=255) cTGAACTGGCGTAGCCAATTAATACCGCCAGAAAc > 1:13857128/1‑35 (MQ=255) cTGAACTGGCGTAGCCAATTAATACCGCCAGAAAc > 1:19412982/1‑35 (MQ=255) cTGAACTGGCGTAGCCAATTAATACCGCCAGAAAc > 1:2060851/1‑35 (MQ=255) cTGAACTGGCGTAGCCAATTAATACCGCCAGAAAc > 1:19654586/1‑35 (MQ=255) tGAACTGGCGTAGCCAATTAATACCGCCAGAAAcc > 1:2413720/1‑35 (MQ=255) tGAACTGGCGTAGCCAATTAATACCGCCAGAAAcc > 1:15296785/1‑35 (MQ=255) gAACTGGCGTAGCCAATTAATACCGCCAGAAAccc > 1:1208343/1‑35 (MQ=255) aCTGGCGTAGCCAATTAATACCGCCAGAAACCCCg > 1:3779123/1‑35 (MQ=255) aCTGGCGTAGCCAATTAATACCGCCAGAAACCCCg > 1:19508971/1‑35 (MQ=255) aCTGGCGTAGCCAATTAATACCGCCAGAAACCCCg > 1:7004331/1‑35 (MQ=255) cTGGCGTAGCCAATTAATACCGCCAGAAACCCCGc > 1:15837049/1‑35 (MQ=255) | ACAATCGCTGCTTGCCAGATTATTGCCGCTGAACTGGCGTAGCCAATTAATACCGCCAGAAACCCCGC > REL606/1476087‑1476154 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |