New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2966320 | 71 (0.690) | 9 (0.120) | 3/36 | NT | 10.0% | coding (1067/1992 nt) | tktA | transketolase 1, thiamin‑binding |
? | REL606 | 3882316 = | 109 (1.410) | coding (102/816 nt) | atpB | F0F1 ATP synthase subunit A |
Only 100 of 159 total aligned reads displayed.
CGCTTCGATAGCATTCTGAGACGCTTTACGGCTGGCGATTTTCGCCGGATTAGCCTGCAGTTTAGCGAT > REL606/2966286‑2966354 | cGCTTCGATAGCATTCTGAGACGCTTTACGGCTGG < 1:17462861‑M1/35‑1 (MQ=255) cGCTTCGATAGCATTCTGAGACGCTTTACGGCTGG < 1:9144645‑M1/35‑1 (MQ=255) cGCTTCGATAGCATTCTGAGACGCTTTACGGCTGG > 1:7243982‑M1/1‑35 (MQ=255) cGCTTCGATAGCATTCTGAGACGCTTTACGGCTGG < 1:7260884‑M1/35‑1 (MQ=255) gCTTCGATAGCATTCTGAGACGCTTTACGGCTGGg > 1:9833426‑M1/1‑34 (MQ=255) gCTTCGATAGCATTCTGAGACGCTTTACGGCTGGg > 1:4891808‑M1/1‑34 (MQ=255) gCTTCGATAGCATTCTGAGACGCTTTACGGCTGGg > 1:15989979‑M1/1‑34 (MQ=255) gCTTCGATAGCATTCTGAGACGCTTTACGGCTGGg > 1:892599‑M1/1‑34 (MQ=255) gCTTCGATAGCATTCTGAGACGCTTTACGGCTGGc < 1:18615872/35‑1 (MQ=255) gCTTCGATAGCATTCTGAGACGATTTACGGCTGGc < 1:13264014/35‑1 (MQ=255) cTTCGATAGCATTCTGAGACGCTTTACGGCTGGgg > 1:7186942‑M1/1‑33 (MQ=255) cTTCGATAGCATTCTGAGACGCTTTACGGCTGGgg > 1:8278007‑M1/1‑33 (MQ=255) cTTCGATAGCATTCTGAGACGCTTTACGGCTGGCg < 1:2673195/35‑1 (MQ=255) cTTCGATAGCATTCTGAGACGCTTTACGGCTGGCg < 1:8903063/35‑1 (MQ=255) ttCGATAGCATTCTGAGACGCTTTACGGCTGGggg > 1:7549252‑M1/1‑32 (MQ=255) ttCGATAGCATTCTGAGACGCTTTACGGCTGGggg > 1:15392482‑M1/1‑32 (MQ=255) ttCGATAGCATTCTGAGACGCTTTACGGCTGGggg > 1:15366508‑M1/1‑32 (MQ=255) ttCGATAGCATTCTGAGACGCTTTACGGCTGGCGa < 1:17832138/35‑1 (MQ=255) ttCGATAGCATTCTGAGACGCTTTACGGCTGGCGa < 1:11803472/35‑1 (MQ=255) tCGATAGCATTCTGAGACGCTTTACGGCTGGgggg > 1:5001632‑M1/1‑31 (MQ=255) tCGATAGCATTCTGAGACGCTTTACGGCTGGgggg > 1:18902922‑M1/1‑31 (MQ=255) tCGATAGCATTCTGAGACGCTTTACGGCTGGgggg > 1:13673834‑M1/1‑31 (MQ=255) tCGATAGCATTCTGAGACGCTTTACGGCTGGgggg > 1:15665337‑M1/1‑31 (MQ=255) cGATAGCATTCTGAGACGCTTTACTGCTGGCGAtt > 1:2870487/1‑35 (MQ=255) cGATAGCATTCTGAGACGCTTTACGGCTGGggggt > 1:6675048‑M1/1‑30 (MQ=255) gATAGCATTCTGAGACGCTTTACGGCTGGCGAttt < 1:7709989/35‑1 (MQ=255) gATAGCATTCTGAGAAGCTTTACGGCTGGCGAttt < 1:19453734/35‑1 (MQ=255) aTAGCATTCTGAGACGCTTTACGGCTGGgggtttt > 1:18674926‑M1/1‑28 (MQ=255) aTAGCATTCTGAGACGCTTTACGGCTGGggggttt > 1:2992234‑M1/1‑28 (MQ=255) aTAGCATTCTGAGACGCTTTACGGCTGGCGAtttt < 1:20401696/35‑1 (MQ=255) tAGCATTCTGAGACGCTTTACGGCTGGggggtttt > 1:6757197‑M1/1‑27 (MQ=255) tAGCATTCTGAGACGCTTTACGGCTGGggggtttt > 1:14445773‑M1/1‑27 (MQ=255) tAGCATTCTGAGACGCTTTACGGCTGGCGATTTTc < 1:5745994/35‑1 (MQ=255) naGCATNCTGAGACGCTTTACGGCTGGCGATTTTc < 1:1209355/34‑1 (MQ=255) gCATTCTGAGACGCTTTACGGCTGGCGATTTTCGc < 1:2683816/35‑1 (MQ=255) cATTCTGAGACGCTTTACGGCTGGggggtttttgc > 1:19484119‑M1/1‑24 (MQ=255) cATTCTGAGACGCTTTACGGCTGGCGATTTTCGcc < 1:10804985/35‑1 (MQ=255) cATTCTGAGACGCTTTACGGCTGGCGATTTTCGcc < 1:10260070/35‑1 (MQ=255) aTTCTGAGACGCTTTACGGCTGGCGATTTTCGCCg < 1:94554/35‑1 (MQ=255) aTTCTGAGACGCTTTACGGCTGGCGATTTTCGCCg < 1:13289171/35‑1 (MQ=255) ttCTGAGACGCTTTACGGCTGGCGATTTTCGCCgg < 1:4871502/35‑1 (MQ=255) tCTGAGACGCTTTACGGCTGGCGATTTTCGCCGGn < 1:4118515/35‑1 (MQ=255) tCTGAGACGCTTTACGGCTGGCGATTTTCGCCGGa < 1:16489756/35‑1 (MQ=255) tCTGAGACGCTTTACGGCTGGCGATTTTCGCCGGa < 1:17760906/35‑1 (MQ=255) tCTGAGACGCTTTACGGCTGGCGATTTTCGCCGGa < 1:15987068/35‑1 (MQ=255) tCTGAGACGCTTTACGGCTGGCGATTTTCGCCGGa < 1:12414712/35‑1 (MQ=255) cTGAGACGCTTTACGGCTGGCGATTTTCGCCGGAt < 1:5062171/35‑1 (MQ=255) tGAGACGCTTTACGGCTGGCGATTTTCGCCGGAtt < 1:4090014/35‑1 (MQ=255) tGAGACGCTTTACGGCTGGCGATTTTCGCCGGAtt < 1:3130856/35‑1 (MQ=255) gagaCGCTTTACGGCTGGCGATTTTCGCCGGATTa < 1:2774336/35‑1 (MQ=255) agaCGCTTTACGGCTGGCGATTTTCGCCGGATTAg < 1:9359885/35‑1 (MQ=255) agaCGCTTTACGGCTGGCGATTTTCGCCGGATTAg < 1:17444134/35‑1 (MQ=255) agaCGCTTTACGGCTGGCGATTTTCGCCGGATTAg < 1:17182284/35‑1 (MQ=255) agaCGCTTTACGGCTGGCGATTTTCGCCGGATTAg < 1:8875102/35‑1 (MQ=255) gaCGCTTTACGGCTGGCGATTTTCGCCGGATTAGc < 1:3750912/35‑1 (MQ=255) aCGCTTTACGGCTGGCGATTTTCGCCGGATTAGcc < 1:9039403/35‑1 (MQ=255) cGCTTTACGGCTGGCGATTTTCGCCGGATTAGCCt < 1:5855866/35‑1 (MQ=255) gCTTTACGGCTGGCGATTTTCGCCGGATTAGCCTg < 1:10052030/35‑1 (MQ=255) gCTTTACGGCTGGCGATTTTCGCCGGATTAGCCTg < 1:19768551/35‑1 (MQ=255) gCTTTACGGCTGGAGATTTTCGCCGGATTAGCCTg < 1:6014653/35‑1 (MQ=255) tttACGGCTGGCGATTTTCGCCGGATTAGCCTGCa < 1:708824/35‑1 (MQ=255) tttACGGCTGGCGATTTTCGCCGGATTAGCCTGCa < 1:6461189/35‑1 (MQ=255) tttACGGCTGGCGATTTTCGCCGGATTAGCCTGCa < 1:522161/35‑1 (MQ=255) tttACGGCTGGCGATTTTCGCCGGATTAGCCTGCa < 1:13729318/35‑1 (MQ=255) tttACGGCTGGCGATTTTCGCCGGATTAGCCTGCa < 1:1146989/35‑1 (MQ=255) ttACGGCTGGCGATTTTCGCCGGATTAGCCTGCAg < 1:300844/35‑1 (MQ=255) ttACGGCTGGCGATTTTCGCCGGATTAGCCTGCAg < 1:10877500/35‑1 (MQ=255) tACGGCTGGCGATTTTCGCCGGATTAGCCTGCAGt < 1:13339745/35‑1 (MQ=255) tACGGCTGGCGATTTTCGCCGGATTAGCCTGCAGt < 1:7806551/35‑1 (MQ=255) aCGGCTGGCGATTTTCGCCGGATTAGCCTGCAGtt < 1:4309885/35‑1 (MQ=255) aCGGCTGGCGATTTTCGCCGGATTAGCCTGCAGtt < 1:1590486/35‑1 (MQ=255) cGGCTGGCGATTTTCGCCGGATTAGCCTGCAGttt < 1:18723774/35‑1 (MQ=255) cGGCTGGCGATTTTCGCCGGATTAGCCTGCAGttt < 1:1426033/35‑1 (MQ=255) cGGCTGGCGATTTTCGCCGGATTAGCATGCAGttt < 1:6211232/35‑1 (MQ=255) ggCTGGCGATTTTCGCCGGATTAGCCTGCAGTTTa < 1:19134191/35‑1 (MQ=255) ggCTGGCGATTTTCGCCGGATTAGCCTGCAGTTTa < 1:18512299/35‑1 (MQ=255) ggCTGGCGATTTTCGCCGGATTAGCCTGCAGTTTa < 1:14556298/35‑1 (MQ=255) ggCTGGCGATTTTCGCCGGATTAGCCTGCAGTTTa > 1:10604715/1‑35 (MQ=255) gCTGGCGATTTTCGCCGGATTAGCCTGCAGTTTAg < 1:16813972/35‑1 (MQ=255) gCTGGCGATTTTCGCCGGATTAGCCTGCAGTTTAg < 1:1645595/35‑1 (MQ=255) cTGGCGATTTTCGCCGGATTAGCCTGCTGTTTAGc > 1:2586404/1‑35 (MQ=255) cTGGCGATTTTCGCCGGATTAGCCTGCAGTTTGGc < 1:2096054/35‑1 (MQ=255) cTGGCGATTTTCGCCGGATTAGCCTGCAGTTTAGc < 1:17073206/35‑1 (MQ=255) cTGGCGATTTTCGCCGGATTAGCCTGCAGTTTAGc < 1:11956552/35‑1 (MQ=255) cTGGCGATTTTCGCCGGATTAGCCTGCAGTTTAGc < 1:17660018/35‑1 (MQ=255) cTGGCGATTTTCGCCGGATTAGCCTGCAGTTTAGc < 1:19044224/35‑1 (MQ=255) tGGCGATTTTCGCCGGATTAGCCTGCAGTTTAGCg < 1:8406173/35‑1 (MQ=255) tGGCGATTTTCGCCGGATTAGCCTGCAGTTTAGCg < 1:7984637/35‑1 (MQ=255) ggCGATTTTCGCCGGATTAGCCTGCAGTTTAGCGa < 1:2012641/35‑1 (MQ=255) ggCGATTTTCGCCGGATTAGCCTGCAGTTTAGCGa > 1:13070459/1‑35 (MQ=255) ggCGATTTTCGCCGGATTAGCCTGCAGTTTAGCGa < 1:14908485/35‑1 (MQ=255) gggggttttgtggatccaccagcgagaatgtacgc < 1:1420046‑M1/35‑35 (MQ=255) gggggttttgtggatccaccagcgagaatgtacgc > 1:10544002‑M1/1‑1 (MQ=255) gggggttttgtggatccaccagcgagaatgtacgc > 1:7057531‑M1/1‑1 (MQ=255) gCGATTTTCGCGGGATTAGCCTGCAGTTTAGCGAt < 1:3389100/35‑1 (MQ=255) gCGATTTTCGCCGGATTAGCCTGCAGTTTAGCGAt > 1:74242/1‑35 (MQ=255) gCGATTTTCGCCGGATTAGCCTGCAGTTTAGCGAt < 1:13066605/35‑1 (MQ=255) gCGATTTTCGCCGGATTAGCCTGCAGTTTAGCGAt < 1:11968079/35‑1 (MQ=255) gCGATTTTCGCCGGATTAGCCTGCAGTTTAGCGAt < 1:15762483/35‑1 (MQ=255) gCGATTTTCGCCGGATTAGCCTGCAGTTTAGCGAt < 1:221445/35‑1 (MQ=255) | CGCTTCGATAGCATTCTGAGACGCTTTACGGCTGGCGATTTTCGCCGGATTAGCCTGCAGTTTAGCGAT > REL606/2966286‑2966354 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |