New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3686160 | 56 (0.540) | 10 (0.160) | 3/30 | NT | 30.3% | coding (402/741 nt) | yiaT | hypothetical protein |
? | REL606 | 4048325 = | 11 (0.170) | coding (224/927 nt) | yihR | predicted aldose‑1‑epimerase |
Only 100 of 112 total aligned reads displayed.
ATATTCCTGCCCCTGATAGCGGTAACAGCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCACTTTACC > REL606/4048291‑4048359 | atatTCCTGCCCCTGATAGCGTTAACAGCCGTTgg > 1:2592505/1‑35 (MQ=255) atatTCCTGCCCCTGATAGCGGTAACAGCCGTTgg > 1:16616221/1‑35 (MQ=255) atatTCCTGCCCCTGATAGCGGTAACAGCCGTTgg > 1:6688261/1‑35 (MQ=255) atatTCCTGCCCCTGATAGCGGTAACAGCCGTTgg > 1:19956919/1‑35 (MQ=255) atatTCCTGCCCCTGATAGCGGTAACAGCCGGTgg > 1:10935261/1‑35 (MQ=255) atatTCCTGCCCCTGATAGCGGTAACAGCCGGTgg > 1:20527920/1‑35 (MQ=255) tatTCCTGCCCCTGATAGCGGTAACAGCCGTTGGc > 1:13633181/1‑35 (MQ=255) tatTCCTGCCCCTGATAGCGGTAACAGCCGTTGGc > 1:11604191/1‑35 (MQ=255) atTCCTGCCCCTGATAGCGGTAACAGCCGTTGGCg > 1:14484035/1‑35 (MQ=255) ttCCTGCCCCTGATAGCGGTAACAGCCGTTGGCgg > 1:9206489/1‑34 (MQ=255) tCCTGCCCCTGATAGCGGTAACAGCCGTTGGCGAt > 1:3985460/1‑35 (MQ=255) tCCTGCCCCTGATAGCGGTAACAGCCGTTGGCGAt > 1:5698423/1‑35 (MQ=255) ccTGCCCCTGATAGCGGTAACAGCCGGTGGCGATc > 1:2070395/1‑35 (MQ=255) cggCCCCTGATAGCGGTATCAGCCGTTGGCGATcc < 1:9927538/33‑1 (MQ=37) cTGCCCCTGATAGCGGTAACAGCCGTTGGCGATcc > 1:8710123/1‑35 (MQ=255) gCCCCTGATAGCGGTAACAGCCGTTGGCGATCCgg > 1:16134431/1‑35 (MQ=255) ccccTGATAGCGGTAACAGCCGTTGGCGATCCggg > 1:10842941/1‑34 (MQ=255) cccTGATAGCGGTAACAGCCGTTGGCGATCCGGtt > 1:10148267/1‑35 (MQ=255) cTGATAGCGGTAACAGCCGGTGGCGGTTCGGGTCg > 1:1944855/1‑35 (MQ=19) tGATAGCGGTAACAGCCGTTGGCGATCCGGGTCgg > 1:5128777/1‑35 (MQ=255) cccccccccagccgttgGCGATCCGGTTCGGCCAc < 1:9897997‑M2/18‑1 (MQ=255) cccccccccagccgttgGCGATCCGGTTCGGCCAc < 1:9323223‑M2/18‑1 (MQ=255) cccccccccagccgttgGCGATCCGGTTCGGCCAc < 1:17360047‑M2/18‑1 (MQ=255) cccccccccagccgttgGCGATCCGGTTCGGCCAc < 1:16665987‑M2/18‑1 (MQ=255) gCGGTAACAGCCGTTGGCGAACCGGCTCGGCCACg > 1:18494765/1‑35 (MQ=37) ccccccccagccgttgGCGATCCGGTTCGGCCACg < 1:8331632‑M2/19‑1 (MQ=255) ccccccccagccgttgGCGATCCGGTTCGGCCACg < 1:4292959‑M2/19‑1 (MQ=255) ccccccccagccgttgGCGATCCGGTTCGGCCACg < 1:12422903‑M2/19‑1 (MQ=255) cccccccagccgttgGCGATCCGGTTCGGCCACgg < 1:6308722‑M2/20‑1 (MQ=255) cccccccagccgttgGCGATCCGGTTCGGCCACgg < 1:15581129‑M2/20‑1 (MQ=255) cccccccagccgttgGCGATCCGGTTCGGCCACgg < 1:9262051‑M2/20‑1 (MQ=255) cGGTAACAGCCGTTGGCGATCCGGTTTGGCCCCgg > 1:9104866/1‑35 (MQ=37) ggTAACAGCCGTTGGCGATCCGGGTCGGCCACGGa > 1:15794316/1‑35 (MQ=255) ccccccagccgttgGCGATCCGGTTCGGCCACGGa < 1:14642477‑M2/21‑1 (MQ=255) ccccccagccgttgGCGATCCGGTTCGGCCACGGa < 1:17459574‑M2/21‑1 (MQ=255) ccccccagccgttgGCGATCCGGTTCGGCCACGGa < 1:7348155‑M2/21‑1 (MQ=255) cccccagccgttgGCGATCCGGTTCGGCCACGGaa < 1:11981154‑M2/22‑1 (MQ=255) tAACAGCCGTTGGCGATCCGGTTCGGCCACGGAAt > 1:17838665/1‑35 (MQ=255) ccccagccgttgGCGATCCGGTTCGGCCACGGAAt < 1:740126‑M2/23‑1 (MQ=255) ccccagccgttgGCGATCCGGTTCGGCCACGGAAt < 1:17449316‑M2/23‑1 (MQ=255) ccccagccgttgGCGATCCGGTTCGGCCACGGAAt < 1:1490911‑M2/23‑1 (MQ=255) ccccagccgttgGCGATCCGGTTCGGCCACGGAAt < 1:14186213‑M2/23‑1 (MQ=255) ccccagccgttgGAGATCCGGTTCGGCCACGGAAt < 1:20506821‑M2/23‑1 (MQ=255) cccagccgttgGCGATCCGGTTCGGCCACGGAATa < 1:17592434‑M2/24‑1 (MQ=255) cccagccgttgGCGATCCGGTTCGGCCACGGAATa < 1:1570640‑M2/24‑1 (MQ=255) ccagccgttgGCGATCCGGTTCGGCCACGGAAtac < 1:6557607‑M2/25‑2 (MQ=255) ccagccgttgGCGATCCGGTTCGGCCACGGAATaa < 1:7333455‑M2/25‑1 (MQ=255) ccagccgttgGCGATCCGGTTCGGCCACGGAATaa < 1:7588139‑M2/25‑1 (MQ=255) ccagccgttgGCGATCCGGTTCGGCCACGGAATaa < 1:19083427‑M2/25‑1 (MQ=255) aCAGCCGTTGGCGATCCGGTTCGGCCACGGAATaa > 1:11453981/1‑35 (MQ=255) aCAGCCGTTGGCGATCCGGTTCGGCCACGGAATaa > 1:16595099/1‑35 (MQ=255) cagccgttgGCGATCCGGTTCGGCCACGGAATAAg < 1:10503395‑M2/26‑1 (MQ=255) cagccgttgGCGATCCGGTTCGGCCACGGAATAAg < 1:18848524‑M2/26‑1 (MQ=255) cagccgttgGCGATCCGGTTCGGCCACGGAATAAg > 1:4800662‑M2/10‑35 (MQ=255) cagccgttgGCGATCCGGTTCGGCCACGGAATAAg > 1:13455727‑M2/10‑35 (MQ=255) cagccgttgGCGATCCGGTTCGGCCACGGAAAAAg > 1:19243771‑M2/10‑35 (MQ=255) cagccgttgGCGATCCGGTTCGGCCACAGAATAAg > 1:19968796‑M2/10‑35 (MQ=255) agccgttgGCGATCCGGTTCGGCCACGGAATAAGc > 1:18947937‑M2/9‑35 (MQ=255) agccgttgGCGATCCGGTTCGGCCACGGAATAAGc < 1:14492224‑M2/27‑1 (MQ=255) agccgttgGCGATCCGGTTCGGCCACGGAATAAGc > 1:9833637‑M2/9‑35 (MQ=255) agccgttgGCGATCCGGTTCGGCCACGGAATAAGc < 1:5952276‑M2/27‑1 (MQ=255) gccgttgGCGATCCGGTTCGGCCACGGAATAAGCa > 1:14908908‑M2/8‑35 (MQ=255) gccgttgGCGATCCGGTTCGGCCACGGAATAAGCa > 1:3738279‑M2/8‑35 (MQ=255) gccgttgGCGATCCGGTTCGGCCACGGAATAAGCa > 1:13662483‑M2/8‑35 (MQ=255) gccgttgGCGATCCGGTTCGGCCACGGAATAAGCa > 1:13290266‑M2/8‑35 (MQ=255) gccgttgGCGATCCGGTTCGGCCACGGAATAAGCa < 1:17266316‑M2/28‑1 (MQ=255) gccgttgGCGATCCGGTTCGGCCACGGAATAAGCa > 1:18049984‑M2/8‑35 (MQ=255) ccgttgGCGATCCGGTTCGGCCACGGAATAAGCAc < 1:6697236‑M2/29‑1 (MQ=255) ccgttgGCGATCCGGTTCGGCCACGGAATAAGCAc < 1:8036755‑M2/29‑1 (MQ=255) ccgttgGCGATCCGGTTCGGCCACGGAATAAGCAc > 1:16556161‑M2/7‑35 (MQ=255) ccgttgGCGATCCGGTTCGGCCACGGAATAAGCAc < 1:19379835‑M2/29‑1 (MQ=255) ccgttgGCGATCCGGTTCGGCCACGGAATAAGCAc < 1:3788909‑M2/29‑1 (MQ=255) ccgttgGCGATCCGGTTCGGCCACGGAATAAGCAc > 1:15180896‑M2/7‑35 (MQ=255) ccgttgGCGATCCGGTTCGGCCACGGAATAAGCAc < 1:13258502‑M2/29‑1 (MQ=255) cgttgGCGATCCGGTTCGGCCACGGAATAAGCACt > 1:9020058‑M2/6‑35 (MQ=255) cgttgGCGATCCGGTTCGGCCACGGAATAAGCACt > 1:19943616‑M2/6‑35 (MQ=255) cgttgGCGATCAGGTTCGGCCACGGAATAAGCACt < 1:5000502‑M2/30‑1 (MQ=255) gttgGCGATCCGGTTCGGCCACGGAATAAGCACtt < 1:6780700‑M2/31‑1 (MQ=255) gttgGCGATCCGGTTCGGCCACGGAATAAGCACtt > 1:6043797‑M2/5‑35 (MQ=255) gttgGCGATCCGGTTCGGCCACGGAATAAGCACtt > 1:19332219‑M2/5‑35 (MQ=255) ttgGCGATCCGGTTCGGCCACGGAATAAGCACttt < 1:2218291‑M2/32‑1 (MQ=255) ttgGCGATCCGGTTCGGCCACGGAATAAGCACttt < 1:6841325‑M2/32‑1 (MQ=255) ttgGCGATCCGGTTCGGCCACGGAATAAGCACttt < 1:12548570‑M2/32‑1 (MQ=255) ttgGCGATCCGGTTCGGCCACGGAATAAGCACttt < 1:2409291‑M2/32‑1 (MQ=255) ttgGCGATCCGGTTCGGCCACGGAATAAGCACttt < 1:9527211‑M2/32‑1 (MQ=255) ttgGCGATCCGGTTCGGCCACGGAATAAGCACttt > 1:7643344‑M2/4‑35 (MQ=255) ttgGCGATCCGGTTCGGCCACGGAATAAGCACttt < 1:8665287‑M2/32‑1 (MQ=255) ttgGCGATCCGGTTCGGCCACGGAATAAGCACttt < 1:18759650‑M2/32‑1 (MQ=255) ttgGCGATCCGGTTAGGCCACGGAATAAGCACttt < 1:10268056‑M2/32‑1 (MQ=255) tgGCGATCCGGTTCGGCCACGGAATAAGCACTTTa > 1:15972399‑M2/3‑35 (MQ=255) tgGCGATCCGGTTCGGCCACGGAATAAGCACTTTa > 1:966074‑M2/3‑35 (MQ=255) tgGCGATCCGGTTCGGCCACGGAATAAGCACTTTa < 1:4866715‑M2/33‑1 (MQ=255) tgGCGATCCGGTTCGGCCACGGAATAAGCACTTTa < 1:2818983‑M2/33‑1 (MQ=255) ggCGGTCCGGTTCGGCAACGGAATAAGCACTTTAc < 1:18157569/35‑1 (MQ=37) gGCGATCCGGTTCGGCCACGGAATAAGCACTTTAc < 1:11717393‑M2/34‑1 (MQ=255) gGCGATCCGGTTCGGCCACGGAATAAGCACTTTAc < 1:7379728‑M2/34‑1 (MQ=255) gGCGATCCGGTTCGGCCACGGAATAAGCACTTTAc < 1:17710129‑M2/34‑1 (MQ=255) gCGATCCGGTTCGGCCACGGAATAAGCACTTTAcc < 1:1789139/35‑1 (MQ=255) gCGATCCGGTTCGGCCACGGAATAAGCACTTTAcc < 1:1504326/35‑1 (MQ=255) gCGATCCGGTTCGGCCACGGAATAAGCACTTTAcc < 1:11072848/35‑1 (MQ=255) | ATATTCCTGCCCCTGATAGCGGTAACAGCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCACTTTACC > REL606/4048291‑4048359 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |