New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 293548 | 72 (0.700) | 8 (0.090) | 5/42 | NT | 9.4% | coding (673/855 nt) | ykgD | predicted DNA‑binding transcriptional regulator |
? | REL606 | 2499664 = | 92 (1.020) | coding (171/951 nt) | talA | transaldolase A |
Only 100 of 180 total aligned reads displayed.
AATATGAGCATTTAATAGACGATGCTATCGCCTGGGGTAAAAAAAATGGCAAGACCCAGGAACAACAGG > REL606/2499630‑2499698 | aaTATGGGCATTTAATAGACGATGCTATCGCCCgg > 1:18431562/1‑35 (MQ=38) aaTATGAGCATTTAATAGACGATTCTATCGCCTgg > 1:15599357/1‑35 (MQ=255) aaTATGAGCATTTAATAGACGATGCTATCGCCTgg < 1:13544099/35‑1 (MQ=255) aaTATGAGCATTTAATAGACGATGCTATCGCCTgg > 1:974499/1‑35 (MQ=255) tccgtgatgtttccggaaccacgccgctggctggg > 1:12369593‑M2/34‑35 (MQ=255) tccgtgatgtttccggaaccacgccgctggctggg > 1:9781566‑M2/34‑35 (MQ=255) atatGAGCATTTAATAGACGATGCTATCGCGTggg < 1:8477856/35‑1 (MQ=255) atatGAGCATTTAATAGACGATGCTATCGCCTggg > 1:2891292/1‑35 (MQ=255) atatGAGCATTTAATAGACGATGCTATCGCCTggg > 1:20439684/1‑35 (MQ=255) atatGAGCATTTAATAGACGATGCTATCGCCTggg > 1:20334768/1‑35 (MQ=255) atatGAGCATTTAATAGACGATGCTATCGCCTggg < 1:5061545/35‑1 (MQ=255) tatGAGCATTTAATAGACGATGCTATCGCCTgggg > 1:18987084/1‑35 (MQ=255) tatGAGCATTTAATAGACGATGCTATCGCCTgggg > 1:16614305/1‑35 (MQ=255) ccgtgatgtttccggaaccacgccgctggctgggg > 1:3489510‑M2/33‑35 (MQ=255) cgtgatgtttccggaaccacgccgctggctggggg > 1:4707327‑M2/32‑34 (MQ=255) atGAGCATTTAATAGACGATGCTATCGCCTggggg > 1:18632154/1‑34 (MQ=255) atGAGCATTTAATAGACGATGCTATCGCCTGGGGt < 1:19388618/35‑1 (MQ=255) gtgatgtttccggaaccacgccgctggctggggga > 1:3515771‑M2/31‑33 (MQ=255) gtgatgtttccggaaccacgccgctggctgGGgtt > 1:1034722‑M2/31‑34 (MQ=255) gtgatgtttccggaaccacgccgctggctgGGgtg > 1:14875917‑M2/31‑34 (MQ=255) tgatgtttccggaaccacgccgctggctgggggtt > 1:18537440‑M2/30‑32 (MQ=255) tgatgtttccggaaccacgccgctggctgGGGTaa > 1:18949629‑M2/30‑35 (MQ=255) gAGCATTTAATAGACGATGCTATCGCCTGGGGGaa > 1:2260724/1‑35 (MQ=255) aGCATTTAATAGACGATGCTATCGCCTGGGGGaaa > 1:13311370/1‑35 (MQ=255) gCATTTAATAGACGATGCTATCGCCTGGGGTaaaa < 1:17047785/35‑1 (MQ=255) gCATTTAATAGACGATGCTATCGCCTGGGGGaaaa > 1:105348/1‑35 (MQ=255) gCATTTAATAGACGATGCTATCGCCTGGGGGaaaa > 1:8254325/1‑35 (MQ=255) gtttccggaaccacgccgctggctgGGGTtaaaaa > 1:19848010‑M2/26‑35 (MQ=255) gtttccggaaccacgccgctggctgGGGTaacaaa > 1:20106708‑M2/26‑35 (MQ=255) aTTTAATAGACGATGCTATCGCCTGGGGGaaaaaa > 1:7212463/1‑35 (MQ=255) aTTTAATAGACGATGCTATCGCCTGGGGGaaaaaa > 1:13243287/1‑35 (MQ=255) tttccggaaccacgccgctggctgGGGTtaaaaaa > 1:5147344‑M2/25‑35 (MQ=255) tttccggaaccacgccgctggctgGGGTtaaaaaa > 1:13866670‑M2/25‑35 (MQ=255) tttAATAGACGATGCTATCGCCTGGGGTaaaaaaa > 1:11038334/1‑35 (MQ=255) tttAATAGACGATGCTATCGCCTGGGGTaaaaaaa < 1:15741294/35‑1 (MQ=255) ttAATAGACGATGCTATCGCCTGGGGTaaaaaaaa < 1:17476554/35‑1 (MQ=255) ttAATAGACGATGCTATCGCCTGGGGTaaaaaaaa < 1:18132313/35‑1 (MQ=255) tAATAGACGATGCTATCGCCTGGGGTAAAAAAAAt < 1:17414581/35‑1 (MQ=255) tAATAGACGATGCTATCGCCTGGGGGAAAAAAAAt > 1:15944420/1‑35 (MQ=255) tAATAGACGATGCTATCGCCTGGGGGAAAAAAAAt > 1:12976725/1‑35 (MQ=255) ccggaaccacgccgctggctgGGGTTAAAAAAATg > 1:6788244‑M2/22‑35 (MQ=255) aaTAGACGATGCTATCGCCTGGGGTAAAAAAAATg < 1:17544196/35‑1 (MQ=255) aTAGACGATGCTATCGCCTGGGGTAAAAAAAATgg < 1:12095234/35‑1 (MQ=255) tAGACGATGCTATCGCCTGGGGTAAAAAAAATGGc < 1:13882149/35‑1 (MQ=255) tAGACGATGCTATCGCCTGGGGTAAAAAAAATGGc < 1:12337819/35‑1 (MQ=255) tAGACGATGCTATCGCCTGGGGTAAAAAAAATGGc < 1:7177500/35‑1 (MQ=255) tAGACGATGCTATCGCCTGGGGTAAAAAAAATGGc < 1:7580239/35‑1 (MQ=255) tAGACGATGCTATCGCCTGGGGTAAAAAAAAAgga > 1:4524085/1‑34 (MQ=255) tAGACGATGCTATCGCCTGGGGGAAAAAAAATGGc > 1:13805328/1‑35 (MQ=255) tAGACGATGCTATCGCCTGGGGGAAAAAAAATGGc > 1:5335626/1‑35 (MQ=255) tAGACGATGCTATCGCCTGGGGGAAAAAAAATGGc > 1:16033418/1‑35 (MQ=255) aGACGATGCTATCGCCTGGGGTAAAAAAAATggga > 1:20267763/1‑33 (MQ=255) aGACGATGCTATCGCCTGGGGGAAAAAAAATGGCa > 1:7395521/1‑35 (MQ=255) gACGATGCTATCGCCTGGGGTAAAAAAAATGGCaa < 1:6269468/35‑1 (MQ=255) aCGATGCTATCGCCTGGGGTAAAAAAAATGGCAAg < 1:62184/35‑1 (MQ=255) aCGATGCTATCGCCTGGGGTAAAAAAAATGGCAAg > 1:15841047/1‑35 (MQ=255) aCGATGCTATCGCCTGGGGTAAAAAAAATGGCAAg < 1:16737252/35‑1 (MQ=255) aCGATGCTATCGCCTGGGGTAAAAAAAATGGCAAg > 1:11337358/1‑35 (MQ=255) gATGCTATCGCCTGGGGTAAAAAAAATGGCCAGAc > 1:17881604/1‑35 (MQ=255) gATGCTATCGCCTGGGGTAAAAAAAATGGCAAGAc < 1:9526727/35‑1 (MQ=255) gATGCTATCGCCTGGGGTAAAAAAAATGGCAAGAc > 1:6170146/1‑35 (MQ=255) gATGCTATCGCCTGGGGTAAAAAAAATGGCAAGAc > 1:3704762/1‑35 (MQ=255) gATGCTATCGCCTGGGGTAAAAAAAATGGCAAGAc > 1:13572969/1‑35 (MQ=255) gATGCTATCGCCTGGGGTAAAAAAAATGGCAAGAc > 1:3020015/1‑35 (MQ=255) gATGCTATAGCCTGGGGTAAAAAAAATGGCAAGAc < 1:5320640/35‑1 (MQ=255) aTGCTATCGCCTGGGGTAAAAAAAATGGCAAGAcc > 1:14357369/1‑35 (MQ=255) aTGCTATCGCCTGGGGTAAAAAAAATGGCAAGAcc < 1:16918617/35‑1 (MQ=255) gCTATCGCCTTGGGTAAAAAAAATGGCAAGACCCa > 1:4073838/1‑35 (MQ=255) gCTATCGCCTGGTGTAAAAAAAATGGCAAGACCCa > 1:4466521/1‑35 (MQ=255) gCTATCGCCTGGGGTAAAAAAAATGGCAAGACCCa > 1:3856468/1‑35 (MQ=255) gCTATCGCCTGGGGTAAAAAAAATGGCAAGACCCa > 1:11238683/1‑35 (MQ=255) gCTATCGCCTGGGGTAAAAAAAATGGCAAGACCCa < 1:11372496/35‑1 (MQ=255) cTATCGCCTGGGGTAAAAAAAATGGCAAGACCCAg < 1:704287/35‑1 (MQ=255) tATCGCCTGGTGTAAAAAAAATGGCAAGACCCAgg > 1:7275896/1‑35 (MQ=255) tATCGCCTGGGGTAAAAAAAATGGCAAGACCCAgg < 1:3281853/35‑1 (MQ=255) tATAGCCTGGGGTAAAAAAAATGGCAAGACCCAgg < 1:20394630/35‑1 (MQ=255) aTCGCCTGGGGTAAAAAAAATGGCAAGACCCAGGa < 1:8825923/35‑1 (MQ=255) aTCGCCTGGGGTAAAAAAAATGGCAAGACCCAGGa > 1:15101470/1‑35 (MQ=255) tCGCCTGGGGTAAAAAAAATGGCAAGACCCAGGaa > 1:1534351/1‑35 (MQ=255) tCGCCTGGGGTAAAAAAAATGGCAAGACCCAGGaa < 1:5495568/35‑1 (MQ=255) cGCCTGGGGTAAAAAAAATGGCAATACCCAGGaac > 1:5693233/1‑35 (MQ=255) cGCCTGGGGTAAAAAAAATGGCAAGACCCAGGaac < 1:8090467/35‑1 (MQ=255) gCCTGGGGTAAAAAAAATGGCAAGACCCAGGaaca > 1:2404720/1‑35 (MQ=255) gCCTGGGGTAAAAAAAATGGCAAGACCCAGGaaca > 1:17956849/1‑35 (MQ=255) gCCTGGGGTAAAAAAAATGGCAAGACCCAGGaaca < 1:7213536/35‑1 (MQ=255) ccTGGGGTAAAAAAAATGGCAAGACCCAGGaacaa > 1:8116715/1‑35 (MQ=255) ccTGGGGTAAAAAAAATGGCAAGACCCAGGaacaa < 1:10379904/35‑1 (MQ=255) ccTGGGGTAAAAAAAATGGCAAGACCCAGGaacaa > 1:12712128/1‑35 (MQ=255) ccTGGGGTAAAAAAAATGGCAAGACCCAGGaacaa < 1:19650117/35‑1 (MQ=255) ccTGGGGTAAAAAAAATGGCAAGACCCAGGaacaa < 1:11494256/35‑1 (MQ=255) ctgGGGTAAAAAAAATGGCAAGCCCCAGGaacaac < 1:15492635‑M2/32‑1 (MQ=255) tgGGGTAAAAAAAATGGCAAGGCCCAGGAacaaca < 1:3333261‑M2/33‑1 (MQ=255) cgGGGTAAAAAAAATGGCAAGACCCAGGAacaaca < 1:11342634‑M2/33‑1 (MQ=255) gGGGTAAAAAAAATGGCAAGACCCAGGAACAACAg > 1:12676865‑M2/2‑35 (MQ=255) gGGGTAAAAAAAATGGCAAGACCCAGGAACAACAg > 1:5784354‑M2/2‑35 (MQ=255) gGGGTAAAAAAAATGGCAAGACCCAGGAACAACAg < 1:312491‑M2/34‑1 (MQ=255) gGGGTAAAAAAAATGGCAAGACCCAGGAACAACAg > 1:9083873‑M2/2‑35 (MQ=255) gGGGTAAAAAAAATGGCAAGACCCAGGAACAACAg > 1:365293‑M2/2‑35 (MQ=255) gggTAAAAAAAATGGCAAGACCCAGGAACAACAgg < 1:4149239/35‑1 (MQ=255) gggTAAAAAAAATGGCAAGACCCAGGAACAACAgg < 1:9066450/35‑1 (MQ=255) | AATATGAGCATTTAATAGACGATGCTATCGCCTGGGGTAAAAAAAATGGCAAGACCCAGGAACAACAGG > REL606/2499630‑2499698 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |