New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 215149993 (0.910)15 (0.220) 5/32 NT 19.5% coding (25/3633 nt) yehI hypothetical protein
?REL606 = 2649902 NA (NA)noncoding (776/2906 nt) rrlG 23S ribosomal RNA

Only 100 of 338 total aligned reads displayed.

TTGAATAAGGAAAGAGCATGGACAAGGAATTACCGTGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2151458‑2151499
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggctggGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGG  <  REL606/2649902‑2649869
                                                                            
TTGAATAAGGAAAGAGCATGGACAAGGAATTACCG                                           >  1:18019784/1‑35
TTGAATAAGGAAAGAGCATGGACAAGGAATTACCG                                           <  1:15782630/35‑1
 TGAATAAGGAAAGAGCATGGACAAGGAATTACCGT                                          <  1:19061881/35‑1
 TGAATAAGGAAAGAGCATGGACAAGGAATTACCGT                                          >  1:6865092/1‑35
  GAATAAGGAAAGAGCATGGACAAGGAATTACCGTG                                         <  1:16704112/35‑1
  GAATAAGGAAAGAGCATGGACAAGGAATTACCGTG                                         <  1:15932107/35‑1
  GAATAAGGAAAGAGCATGGACAAGGAATTACCGTG                                         <  1:15463152/35‑1
  GAATAAGGAAAGAGCATGGACAAGGAATTACCGTG                                         >  1:3635082/1‑35
  GAATAAGGAAAGAGCATGGACAAGGAATTACCGTG                                         <  1:4173873/35‑1
  GAATAAGGAAAGAGCATGGACAAGGAATTACCGTG                                         <  1:12377582/35‑1
  GAATAAGGAAAGAGCATGGACAAGGAATTACCGTG                                         <  1:9783916/35‑1
   AATAAGGAAAGAGCATGGACAAGGAATTACCGTGG                                        <  1:1257894/35‑1
    ATAAGGAAAGAGCATGGACAAGGAATTACAGTGGC                                       <  1:6433485/35‑1
     TAAGGAAAGAGCATGGACAAGGAATTACCGTGGCT                                      <  1:6636284/35‑1
      AAGGAAAGAGCATGGACAAGGAATTACCGTGGCTG                                     >  1:14627357/1‑35
       AGGAAAGAGCATGGACAAGGAATTACCGTGGCTGG                                    >  1:12166396/1‑35
       AGGAAAGAGCATGGACAAGGAATTACCGTGGCTGG                                    >  1:10764971/1‑35
        GGAAAGAGCATGGACAAGTAATTACCGTGGCTGGG                                   >  1:2651614/1‑35
          AAAGAGCATGGACAAGGAATTACCGTGGCTGGGGG                                 >  1:1125775/1‑35
           AAGAGCATGGACAAGGAATTACCGTGGCTGGGGGg                                >  1:12867600/1‑34
             GAGCATGGACAAGGAATTACCGTGGCTGGGGGGGA                              >  1:4881461/1‑35
             GAGCATGGACAAGGAATTACCGTGGCTGGGGGGGA                              >  1:18251950/1‑35
                CATGGACAAGGAATTACCGTGGCTGGGGGGGAAAa                           >  1:15153650/1‑34
                                  GTGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGA         <  1:17058824/35‑1
                                  GTGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGA         <  1:10337475/35‑1
                                   TGGCTGGGGGTGAAAGGCCAATCAAACCGTGAGAT        >  1:3777161/1‑35
                                   TGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGAT        <  1:8549579/35‑1
                                   TGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGAT        <  1:19595241/35‑1
                                   TGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGAT        <  1:3520152/35‑1
                                   TGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGAT        <  1:8225229/35‑1
                                   TGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGAT        >  1:13821733/1‑35
                                   TGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGAT        <  1:422462/35‑1
                                   TGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGAT        <  1:13205813/35‑1
                                   TGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGAT        >  1:57872/1‑35
                                   TGGCTGGGGGGGAAAGGCCAATCAAACCGGGAGAT        >  1:19856448/1‑35
                                    GGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATA       <  1:20001542/35‑1
                                    GGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATA       <  1:20120659/35‑1
                                    GGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATA       <  1:8436999/35‑1
                                    GGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATA       >  1:8902165/1‑35
                                    GGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATA       >  1:10023551/1‑35
                                    GGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATA       >  1:10210614/1‑35
                                    GGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATA       <  1:10474095/35‑1
                                    GGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATA       <  1:11141014/35‑1
                                    GGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATA       <  1:14005518/35‑1
                                     aCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAG      <  1:17910684/34‑1
                                     GCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAG      >  1:9368567/1‑35
                                     GCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAG      >  1:2797485/1‑35
                                     GCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAG      <  1:297454/35‑1
                                     GCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAG      <  1:343741/35‑1
                                     GCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAG      >  1:12491017/1‑35
                                     GCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAG      >  1:19257418/1‑35
                                      CTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGC     >  1:2474158/1‑35
                                      CTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGC     >  1:14353914/1‑35
                                      CTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGC     >  1:1416443/1‑35
                                      CTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGC     <  1:7919257/35‑1
                                      CTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGC     <  1:10696448/35‑1
                                      CTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGC     <  1:9199565/35‑1
                                      CTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGC     <  1:9611268/35‑1
                                      CTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGC     <  1:16564971/35‑1
                                      CTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGC     <  1:18376957/35‑1
                                      CTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGC     <  1:16380207/35‑1
                                      CTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGC     <  1:15614147/35‑1
                                       TGGGGGTGAAGGGCCAATCAAACCGGGAGATAGCT    <  1:18673464/35‑1
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    <  1:6958504/35‑1
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    >  1:1735231/1‑35
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    <  1:6785120/35‑1
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    <  1:8670299/35‑1
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    <  1:3368320/35‑1
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    >  1:11925652/1‑35
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    >  1:17576504/1‑35
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    >  1:1201751/1‑35
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    <  1:6247919/35‑1
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    >  1:17873628/1‑35
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    >  1:13473712/1‑35
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    <  1:20544259/35‑1
                                       TGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCT    >  1:5577308/1‑35
                                        tGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   >  1:18874048/2‑35
                                        tGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   >  1:14564981/2‑35
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   >  1:7781693/1‑35
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   <  1:16256529/35‑1
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   >  1:16446489/1‑35
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   <  1:7401284/35‑1
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   <  1:9434078/35‑1
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   >  1:17212582/1‑35
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   <  1:1747389/35‑1
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   <  1:11470319/35‑1
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   >  1:6085212/1‑35
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   >  1:5210960/1‑35
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   <  1:13136735/35‑1
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   <  1:15867403/35‑1
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   <  1:15335634/35‑1
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   >  1:15107980/1‑35
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   <  1:1477595/35‑1
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   <  1:232923/35‑1
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   <  1:2061829/35‑1
                                        GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTG   <  1:2032773/35‑1
                                         GGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGG  >  1:4393329/1‑35
                                         GGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGG  >  1:13664595/1‑35
                                         GGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGG  >  1:3301145/1‑35
                                         GGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGG  >  1:9032429/1‑35
                                                                            
TTGAATAAGGAAAGAGCATGGACAAGGAATTACCGTGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2151458‑2151499
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggctggGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGG  <  REL606/2649902‑2649869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.