New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 422590 = | 83 (0.810) | 4 (0.040) | 4/46 | NT | 6.1% | intergenic (‑277/+185) | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
? | REL606 | 801538 = | 45 (0.440) | coding (346/1290 nt) | bioA | adenosylmethionine‑8‑amino‑7‑oxononanoate transaminase |
Only 100 of 133 total aligned reads displayed.
TGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGAAAATAAAGACTCATTAGCTGAAT > REL606/422556‑422624 | tGTTTAACAAATAATTATCATTATGGTGACAATtg < 1:10822313/35‑1 (MQ=255) tGTTTAACAAATAATTATCATTATGGTGACAATtg < 1:11031274/35‑1 (MQ=255) tGTTTAACAAATAATTATCATTATGGTGACAATtg < 1:13577874/35‑1 (MQ=255) gcgtttttctcgcggactccggttccgtagcgggg < 1:6223005‑M1/1‑1 (MQ=255) gTTTAACAAATAATTATCATTATGGTGACAATtgg < 1:6612780/35‑1 (MQ=255) gTTTAACAAATAATTATCATTATGGTGACAATtgg < 1:6567890/35‑1 (MQ=255) gTTTAACAAATAATTATCATTATGGTGACAATtgg < 1:868987/35‑1 (MQ=255) gTTTAACAAATAATTATCATTATGGTGACAATtgg < 1:14899159/35‑1 (MQ=255) tttAACAAATAATTATCATTATGGTGACAATtggg > 1:6863744/1‑35 (MQ=255) tttAACAAATAATTATCATTATGGTGACAATtggg > 1:11066790/1‑35 (MQ=255) tttAACAAATAATTATCATTATGGTGACAATtggg > 1:3357436/1‑35 (MQ=255) gtttttctcgcggactccggttccgtagcgggggg < 1:12184170‑M1/3‑1 (MQ=255) gtttttctcgcggactccggttccgtagcgggggg < 1:18608617‑M1/3‑1 (MQ=255) gtttttctcgcggactccggttccgtagcgggggg < 1:17464988‑M1/3‑1 (MQ=255) gtttttctcgcggactccggttccgtagcggggag < 1:1149238‑M1/3‑3 (MQ=255) tttttctcgcggactccggttccgtagcgggggaa < 1:3609099‑M1/4‑3 (MQ=255) ttAACAAATAATTATCATTATGGTGACAATtgggt > 1:4934632/1‑35 (MQ=255) ttAACAAATAATTATCATTATGGTGACAATtgggt < 1:4758582/35‑1 (MQ=255) ttAACAAATAATTATCATTATGGTGACAATtgggt > 1:17703528/1‑35 (MQ=255) ttAACAAATAATTATCATTATGGTGACAATtgggt > 1:20241983/1‑35 (MQ=255) ttAACAAATAATTATCATTATGGTGACAATtgggt < 1:3308069/35‑1 (MQ=255) ttAACAAATAATTATCATTATGGTGACAATtgggt < 1:11168997/35‑1 (MQ=255) tAACAAATAATTATCATTATGGTGACAATtgggtg < 1:7418824/35‑1 (MQ=255) tttctcgcggactccggttccgtagcggggggggg < 1:12677019‑M1/6‑4 (MQ=255) aaCAAATAATTATCATTATGGTGACAATtgggtgg < 1:3915623/35‑1 (MQ=255) aaCAAATAATTATCATTATGGTGACAATtgggtgg > 1:6895691/1‑35 (MQ=255) aaCAAATAATTATCATTATGGTGACAATtgggtgg < 1:18497296/35‑1 (MQ=255) aaCAAATAATTATCATTATGGTGACAATtgggtgg < 1:19011182/35‑1 (MQ=255) aaCAAATAATTATCATTATGGTGACAATtgggtgg < 1:5857928/35‑1 (MQ=255) aCAAATAATTATCATTATGGTGACAATtgggtggg < 1:6988081/35‑1 (MQ=255) aCAAATAATTATCATTATGGTGACAATtgggtggg < 1:11431386/35‑1 (MQ=255) aCAAATAATTATCATTATGGTGACAATtgggtggg < 1:7789657/35‑1 (MQ=255) cAAATAATTATCATTATGGTGACAATTGGGTgggg > 1:11118738/1‑35 (MQ=255) ctcgcggactccggttccgtagcgggGGGAggggg < 1:18478999‑M1/9‑1 (MQ=255) aaaTAATTATCATTATGGTGACAATTGGGTggggg < 1:3783352/35‑1 (MQ=255) aaaTAATTATCATTATGGTGACAATTGGGTggggg > 1:2604039/1‑35 (MQ=255) aaaTAATTATCATTATGGTGACAATTGGGTggggg < 1:12996760/35‑1 (MQ=255) aaaTAATTATCATTATGGTGACAATTGGGTggggg < 1:11880185/35‑1 (MQ=255) aataatTATCATTATGGTGACAATTGGGTgggggg < 1:19773981/35‑1 (MQ=255) aataatTATCATTATGGTGACAATTGGGTgggggg > 1:20087725/1‑35 (MQ=255) aataatTATCATTATGGTGACAATTGGGTgggggg < 1:5222683/35‑1 (MQ=255) aataatTATCATTATGGTGACAATTGGGTgggggg < 1:13972358/35‑1 (MQ=255) aataatTATCATTATGGTGACAATTGGGTgggggg < 1:11527886/35‑1 (MQ=255) aataatTATCATTATGGTGACAATTGGGTgggggg > 1:9351935/1‑35 (MQ=255) ataatTATCATTATGGTGACAATTGGGTggggggg < 1:58260/35‑1 (MQ=255) ataatTATCATTATGGTGACAATTGGGTggggggg < 1:10481985/35‑1 (MQ=255) cggactccggttccgtagcgggGGGAGGGGGGGaa < 1:9579743‑M1/13‑1 (MQ=255) aatTATCATTATGGTGACAATTGGGTGGGGGGGaa > 1:13452254/1‑35 (MQ=255) aatTATCATTATGGTGACAATTGGGTGGGGGGGaa < 1:2985585/35‑1 (MQ=255) atTATCATTATGGTGACAATTGGGTGGGGGGGcaa > 1:7970107/1‑35 (MQ=255) atTATCATTATGGTGACAATTGGGTGGGGGGGaaa > 1:17426245/1‑35 (MQ=255) atTATCATTATGGTGACAATTGGGTGGGGGGGaaa > 1:5196481/1‑35 (MQ=255) atTATCATTATGGTGACAATTGGGTGGGGGGGaaa > 1:13506983/1‑35 (MQ=255) atTATCATTATGGTGACAATTGGGTGGGGGGGaaa < 1:18764884/35‑1 (MQ=255) ttATCATTATGGTGACAATTGGGTGGGGGGGaaaa < 1:7476366/35‑1 (MQ=255) ttATCATTATGGTGACAATTGGGTGGGGGGGaaaa > 1:19709081/1‑35 (MQ=255) ttATCATTATGGTGACAATTGGGTGGGGGGGaaaa > 1:18802711/1‑35 (MQ=255) ttATCATTATGGTGACAATTGGGTGGGGGGGaaaa > 1:11489363/1‑35 (MQ=255) aTCATTATGGTGACAATTGGGTGGGGGGGAAAATa > 1:11419710/1‑35 (MQ=255) tCATTATGGTGACAATTGGGTGGGGGGGAAAATaa < 1:10255265/35‑1 (MQ=255) tCATTATGGTGACAATTGGGTGGGGGGGAAAATaa < 1:18750672/35‑1 (MQ=255) cATTATGGTGACAATTGGGTGGGGGGGAAAATaaa < 1:2727823/35‑1 (MQ=255) cATTATGGTGACAATTGGGTGGGGGGGAAAATaaa < 1:3842277/35‑1 (MQ=255) cATTATGGTGACAATTGGGTGGGGGGGAAAATaaa < 1:732726/35‑1 (MQ=255) cATTATGGTGACAATTGGGTGGGGGGGAAAATaaa < 1:7134294/35‑1 (MQ=255) ttATGGTGACAATTGGGTGGGGGGGAAAATAAAGa < 1:11432058/35‑1 (MQ=255) ttATGGTGACAATTGGGTGGGGGGGAAAATAAAGa < 1:16953300/35‑1 (MQ=255) ttAAGGTGACAATTGGGTGGGGGGGAAAATAAAGa > 1:20382712/1‑35 (MQ=255) tATGGTGACAATTGGGTGGGGGGGAAAATAAAGAc > 1:16319648/1‑35 (MQ=255) tATGGTGACAATTGGGTGGGGGGGAAAATAAAGAc < 1:14135105/35‑1 (MQ=255) tATGGTGACAATTGGGTGGGGGGGAAAATAAAGAc > 1:13268658/1‑35 (MQ=255) tATGGTGACAATTGGGTGGGGGGGAAAATAAAGAc > 1:18225750/1‑35 (MQ=255) aTGGTGACAATTGGGTGGGGGGGAAAATAAAGACt < 1:683481/35‑1 (MQ=255) aTGGTGACAATTGGGTGGGGGGGAAAATAAAGACt < 1:911436/35‑1 (MQ=255) aTGGTGACAATTGGGTGGGGGGGAAAATAAAGACt > 1:10248040/1‑35 (MQ=255) aTGGTGACAATTGGGTGGGGGGGAAAATAAAGACt < 1:1842880/35‑1 (MQ=255) tGGTGACAATTGGGTGGGGGGGAAAATAAAGACTc > 1:6011501/1‑35 (MQ=255) tGGTGACAATTGGGTGGGGGGGAAAATAAAGACTc > 1:8574493/1‑35 (MQ=255) tGGTGACAATTGGGTGGGGGGGAAAATAAAGACTc > 1:4330905/1‑35 (MQ=255) ggTGACAATTGGGTGGGGGGGAAAATAAAGACTCa > 1:11283749/1‑35 (MQ=255) gTGACAATTGGGTGGGGGGGAAAATAAAGACTCAt < 1:6624333/35‑1 (MQ=255) tGACAATTGGGTGGGGGGGAAAATAAAGACTCAtt < 1:13146917/35‑1 (MQ=255) tGACAATTGGGTGGGGGGGAAAATAAAGACTCAtt > 1:3252817/1‑35 (MQ=255) gACAATTGGGTGGGGGGGAAAATAAAGACTCATTa > 1:16901267/1‑35 (MQ=255) gACAATTGGGTGGGGGGGAAAATAAAGACTCATTa < 1:3816319/35‑1 (MQ=255) aCAATTGGGTGGGGGGGAAAATAAAGACTCATTAg < 1:18787402/35‑1 (MQ=255) aCAATTGGGTGGGGGGGAAAATAAAGACTCATTAg < 1:11789691/35‑1 (MQ=255) cAATTGGGTGGGGGGGAAAATAAAGACTCATTAGc > 1:15505162/1‑35 (MQ=255) cAATTGGGTGGGGGGGAAAATAAAGACTCATTAGc < 1:4628242/35‑1 (MQ=255) aaTTGGGTGGGGGGGAAAATAAAGACTCATTAGCt < 1:18691932/35‑1 (MQ=255) aaTTGGGTGGGGGGGAAAATAAAGACTCATTAGCt < 1:7859374/35‑1 (MQ=255) aTTGGGTGGGGGGGAAAATAAAGACTCATTAGCTg > 1:11260933/1‑35 (MQ=255) ttGGGTGGGGGGGAAAATAAAGACTCATTAGCTGa > 1:18213262/1‑35 (MQ=255) ttGGGTGGGGGGGAAAATAAAGACTCATTAGCTGa > 1:8900817/1‑35 (MQ=255) ttGGGTGGGGGGGAAAATAAAGACTCATTAGCTGa > 1:16794937/1‑35 (MQ=255) ttGGGTGGGGGGGAAAATAAAGACTCATTAGCTGa < 1:20591563/35‑1 (MQ=255) tgggtgggGGGGAAAATAAAGACTCATTAGCTGaa > 1:7147738/1‑35 (MQ=255) tgggtgggGGGGAAAATAAAGACTCATTAGCTGaa > 1:11822704/1‑35 (MQ=255) gggtgggGGGGAAAATAAAGACTCATTAGCTGAAt > 1:12252054/1‑35 (MQ=255) gggtgggGGGGAAAATAAAGACTCATTAGCTGAAt > 1:16147184/1‑35 (MQ=255) | TGTTTAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGAAAATAAAGACTCATTAGCTGAAT > REL606/422556‑422624 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |