New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 215149993 (0.910)15 (0.220) 5/32 NT 19.5% coding (25/3633 nt) yehI hypothetical protein
?REL606 = 2649902 NA (NA)noncoding (776/2906 nt) rrlG 23S ribosomal RNA

Only 100 of 427 total aligned reads displayed.

AGGAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAA  >  REL606/2151465‑2151533
                                  |                                  
aGGAAAGAGCATGGACAAGGAATTACCGTGGCTGG                                    >  1:10764971‑M1/1‑35 (MQ=255)
aGGAAAGAGCATGGACAAGGAATTACCGTGGCTGG                                    <  1:3338920‑M1/35‑1 (MQ=255)
aGGAAAGAGCATGGACAAGGAATTACCGTGGCTGG                                    >  1:11454998‑M1/1‑35 (MQ=255)
aGGAAAGAGCATGGACAAGGAATTACCGTGGCTGG                                    >  1:12166396‑M1/1‑35 (MQ=255)
   aaaGAGCATGGACAAGGAATTACCGTGGCTGGggg                                 >  1:14000291‑M1/1‑32 (MQ=255)
    aaGAGCATGGACAAGGAATTACCGTGGCTGGgggg                                >  1:1309293‑M1/1‑31 (MQ=255)
     agagCATGGACAAGGAATTACCGTGGCTGGCGGAt                               <  1:4052928/35‑1 (MQ=255)
      gagCATGGACAAGGAATTACCGTGGCTGGgggggt                              >  1:735284‑M1/1‑29 (MQ=255)
      gagCATGGACAAGGAATTACCGTGGCTGGggggga                              >  1:18251950‑M1/1‑29 (MQ=255)
      gagCATGGACAAGGAATTACCGTGGCTGGCGGATa                              <  1:11728894/35‑1 (MQ=255)
       agCATGGACAAGGAATTACCGTGGCTGGgggggaa                             >  1:10593801‑M1/1‑28 (MQ=255)
        gCAGGGACAAGGAATTACCGTGGCTGGCGGATAAc                            <  1:18157510/35‑1 (MQ=255)
         cATGGACAAGGAATTACCGTGGCTGGCGGATAACg                           <  1:16627473/35‑1 (MQ=255)
         cATGGACAAGGAATTACCGTGGCTGGCGGATAACg                           <  1:4558055/35‑1 (MQ=255)
         cATGGACAAGGAATTACCATGGCTGGCGGATAACg                           <  1:1772314/35‑1 (MQ=255)
          aTGGACAAGGAATTACCGTGGCTGGgggggaaagc                          >  1:8946621‑M1/1‑25 (MQ=255)
           tGGACAAGGAATTACCGTGGCTGGgggggaaaggc                         >  1:1354909‑M1/1‑24 (MQ=255)
           tGGACAAGGAATTACCGTGGCTGGCGGATAACGcc                         <  1:20116991/35‑1 (MQ=255)
           tGGACAAGGAATTACCGTGGCTGGCGGATAACGcc                         <  1:12616790/35‑1 (MQ=255)
             gACAAGGAATTACCGTGGCTGGGGGGGAACGCCCa                       >  1:2146854/1‑35 (MQ=21)
             gACAAGGAATTACCGTGGCTGGGGGGGAAAGcccc                       >  1:3463344/1‑34 (MQ=12)
             gACAAGGAATTACCGTGGCTGGCGGATAACGCCCa                       <  1:1040343/35‑1 (MQ=255)
             gACAAGGAATTACCGTGGCTGGCGGATAACGCCCa                       <  1:16204296/35‑1 (MQ=255)
              aCAAGGAATTACCGTGGCTGGCGGATAACGCCCaa                      <  1:10972396/35‑1 (MQ=255)
               cAAGGAATTACCGTTGCTGGCGGGTAACGCCCAAc                     >  1:13841148/1‑35 (MQ=25)
               cAAGGAATTACCGTGGCTGGGGGGGAAAGCCCCAc                     >  1:3829707/1‑35 (MQ=9)
                aaGGAATTACCGTGGCTGGGGGGGAAAGCCCCACt                    >  1:6739251/1‑35 (MQ=9)
                 aGGAATTACCGTGGCTGGCGGATAACGCCCAACTg                   <  1:78162/35‑1 (MQ=255)
                  ggAATTACCGTGGCTGGCGGATAACGCCCAACTgg                  <  1:8742075/35‑1 (MQ=255)
                  ggAATTACCGTGGCTGGCGGATAACGCCCAACTgg                  <  1:5075808/35‑1 (MQ=255)
                      ttcccGTGGCTGGCGGATAACGCCCAACTGGAACt              <  1:2948923/32‑1 (MQ=255)
                       tACCGTGGCTGGCGGATAACGCCCAACTGGAACTg             <  1:1888347/35‑1 (MQ=255)
                        aCCGTGGCTGGCGGATAACGCCCAACTGGAACTGa            <  1:19325143/35‑1 (MQ=255)
                         ccGTGGCTGGCGGATAACGCCCAACTGGAACTGaa           <  1:11894257/35‑1 (MQ=255)
                          cGTGGCTGGCGGATAACGCCCAACTGGAACTGaaa          <  1:12375423/35‑1 (MQ=255)
                           gTGGCTGGgggtgaaaggccaatcaaaccgggaga         <  1:17058824‑M1/35‑28 (MQ=255)
                           gTGGCTGGCGGATAACGCCCAACTGGAACTGAAat         <  1:6534739/35‑1 (MQ=255)
                            tggctggcGGATAACGCCCAACTGGAACTGAAata        <  1:620131/35‑1 (MQ=255)
                            tggctggcGGATAACGCCCAACTGGAACTGAAata        <  1:5406082/35‑1 (MQ=255)
                            tGGCTGGgggtgaaaggccaatcaaaccgggagat        >  1:57872‑M1/1‑7 (MQ=255)
                            tGGCTGGgggtgaaaggccaatcaaaccgggagat        >  1:14672984‑M1/1‑7 (MQ=255)
                            tGGCTGGgggtgaaaggccaatcaaaccgggagat        <  1:15523690‑M1/35‑29 (MQ=255)
                            tGGCTGGgggtgaaaggccaatcaaaccgggagat        <  1:10239102‑M1/35‑29 (MQ=255)
                            tGGCTGGgggtgaaaggccaatcaaaccgggagat        <  1:17767670‑M1/35‑29 (MQ=255)
                            tGGCTGGgggtgaaaggccaatcaaaccgggagat        <  1:3520152‑M1/35‑29 (MQ=255)
                             ggCTGGgggtgaaaggccaatcaaaccgggagata       >  1:18452916‑M1/1‑6 (MQ=255)
                             ggCTGGgggtgaaaggccaatcaaaccgggagata       >  1:10023551‑M1/1‑6 (MQ=255)
                             ggCTGGgggtgaaaggccaatcaaaccgggagata       <  1:11141014‑M1/35‑30 (MQ=255)
                              gctggcGGATAACGCACAACTGGAACTGAAAtata      <  1:533272/35‑1 (MQ=255)
                              gCTGGgggtgaaaggccaatcaaaccgggagatag      >  1:2797485‑M1/1‑5 (MQ=255)
                              gCTGGgggtgaaaggccaatcaaaccgggagatag      >  1:157289‑M1/1‑5 (MQ=255)
                              gCTGGgggtgaaaggccaatcaaaccgggagatag      >  1:6878986‑M1/1‑5 (MQ=255)
                              gCTGGgggtgaaaggccaatcaaaccgggagatag      <  1:11240026‑M1/35‑31 (MQ=255)
                              gCTGGgggtgaaaggccaatcaaaccgggagatag      >  1:12491017‑M1/1‑5 (MQ=255)
                              gCTGGgggtgaaaggccaatcaaaccgggagatag      >  1:365257‑M1/1‑5 (MQ=255)
                              gCTGGgggtgaaaggccaatcaaaccgggagatag      >  1:15020829‑M1/1‑5 (MQ=255)
                              gCTGGgggtgaaaggccaatcaaaccgggagatag      >  1:9368567‑M1/1‑5 (MQ=255)
                              gCTGGgggtgaaaggccaatcaaaccgggagatag      <  1:12016447‑M1/35‑31 (MQ=255)
                              gCTGGgggtgaaaggccaatcaaaccgggagatag      >  1:7102275‑M1/1‑5 (MQ=255)
                              actGGgggtgaaaggccaatcaaaccgggagatag      <  1:17910684‑M1/34‑31 (MQ=255)
                               cTGGgggtgaaaggccaatcaaaccgggagatagc     <  1:4180402‑M1/35‑32 (MQ=255)
                               cTGGgggtgaaaggccaatcaaaccgggagatagc     <  1:3181798‑M1/35‑32 (MQ=255)
                               cTGGgggtgaaaggccaatcaaaccgggagatagc     <  1:14414253‑M1/35‑32 (MQ=255)
                               cTGGgggtgaaaggccaatcaaaccgggagatagc     <  1:2645523‑M1/35‑32 (MQ=255)
                               cTGGgggtgaaaggccaatcaaaccgggagatagc     >  1:811850‑M1/1‑4 (MQ=255)
                               cTGGgggtgaaaggccaatcaaaccgggagatagc     >  1:1416443‑M1/1‑4 (MQ=255)
                               cTGGgggtgaaaggccaatcaaaccgggagatagc     >  1:20569980‑M1/1‑4 (MQ=255)
                               cTGGgggtgaaaggccaatcaaaccgggagatagc     >  1:20306918‑M1/1‑4 (MQ=255)
                               cTGGgggtgaaaggccaatcaaaccgggagatagc     <  1:16380207‑M1/35‑32 (MQ=255)
                               cTGGgggtgaaaggccaatcaaaccgggagatagc     <  1:9199565‑M1/35‑32 (MQ=255)
                               cTGGgggtgaaaggccaatcaaaccgggagatagc     <  1:9463022‑M1/35‑32 (MQ=255)
                               cTGGgggtgaaaggccaatcaaaccgggagatagc     >  1:6323715‑M1/1‑4 (MQ=255)
                                tggcGGATAACGCCCAACTGGAACTGAAATATaaa    >  1:757901/1‑35 (MQ=255)
                                tGGgggtgaaaggccaatcaaacctggagatagct    >  1:19876802‑M1/1‑3 (MQ=255)
                                tGGgggtgaaaggccaatcaaaccgtgagatagct    >  1:15252894‑M1/1‑3 (MQ=255)
                                tGGgggtgaaaggccaatcaaaccgggagatagct    <  1:13149375‑M1/35‑33 (MQ=255)
                                tGGgggtgaaaggccaatcaaaccgggagatagct    >  1:15888900‑M1/1‑3 (MQ=255)
                                tGGgggtgaaaggccaatcaaaccgggagatagct    >  1:20376799‑M1/1‑3 (MQ=255)
                                tGGgggtgaaaggccaatcaaaccgggagatagct    <  1:8670299‑M1/35‑33 (MQ=255)
                                tGGgggtgaaaggccaatcaaaccgggagatagct    >  1:1735231‑M1/1‑3 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   <  1:8386702‑M1/35‑34 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   >  1:6792959‑M1/1‑2 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   <  1:9644170‑M1/35‑34 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   <  1:1747389‑M1/35‑34 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   <  1:19114574‑M1/35‑34 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   >  1:16446489‑M1/1‑2 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   <  1:1629599‑M1/35‑34 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   <  1:2409879‑M1/35‑34 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   <  1:15618325‑M1/35‑34 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   <  1:15141156‑M1/35‑34 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   >  1:4339358‑M1/1‑2 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   >  1:6085212‑M1/1‑2 (MQ=255)
                                 gggggtgaaaggccaatcaaaccgggagatagctg   >  1:13350523‑M1/1‑2 (MQ=255)
                                 ggcGGATAACGCCCAACTGGAACTGAAATATaaaa   >  1:14546010/1‑35 (MQ=255)
                                 ggcGGATAACGCCCAACTGGAACTGAAATATaaaa   <  1:20209764/35‑1 (MQ=255)
                                  ggggtgaaaggccaatcaaaccgggagatagctgg  >  1:8525598‑M1/1‑1 (MQ=255)
                                  ggggtgaaaggccaatcaaaccgggagatagctgg  <  1:19766038‑M1/35‑35 (MQ=255)
                                  ggggtgaaaggccaatcaaaccgggagatagctgg  >  1:13664595‑M1/1‑1 (MQ=255)
                                  ggggtgaaaggccaatcaaaccgggagatagctgg  >  1:18684453‑M1/1‑1 (MQ=255)
                                  gcGGATAACGCCCAACTGGAACTGAAATATaaaaa  <  1:16820573/35‑1 (MQ=255)
                                  |                                  
AGGAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAA  >  REL606/2151465‑2151533

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.