Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL606554,3770T→G100.0% 1.0 8V846G (GTG→GGG) ECB_00512putative tail component of prophage
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (8/0):  ref base (0/0):  total (8/0)

CCGTTTGACCGGCAAATTGTTATTCCGGCGGTGGCATTCAGTG  >  REL606/554346‑554388
                               |           
ccGTTTGACCGGCAAATTGTTATTCCGGCGGGggg          >  1:18770711/1‑34 (MQ=0)
ccGTTTGACCGGCAAATTGTTATTCCGGCGGGggg          >  1:19852677/1‑34 (MQ=0)
ccGTTTGACCGGCAAATTGTTATTCCGGCGGGggg          >  1:6823129/1‑34 (MQ=0)
ccGTTTGACCGACAAATTGTTATTCCGGCGGGggg          >  1:9096549/1‑34 (MQ=1)
 cGTTTGACCGGCAAATTGTTATTCCGGCGGGgggg         >  1:14057831/1‑33 (MQ=1)
 cGTTTGACCGGCAAATTGTTATTCCGGCGGGgggg         >  1:9229100/1‑33 (MQ=1)
  gTTTGACCGGCAAATTGTTATTCCGGCGGGggggt        >  1:2416254/1‑32 (MQ=1)
  gTTTGACCGGCAAATTGTTATTCCGGCGGGggggg        >  1:11707805/1‑32 (MQ=1)
  gTTTGACCGGCAAATTGTTATTCCGGCGGGggggg        >  1:1386296/1‑32 (MQ=1)
  gTTTGACCGGCAAATTGTTATTCCGGCGGCggggg        >  1:2483861/1‑32 (MQ=1)
        ccGGCAAATTGTTATTCCGGCGGGGGGGGTCAGTg  >  1:3681519/1‑35 (MQ=0)
                               |           
CCGTTTGACCGGCAAATTGTTATTCCGGCGGTGGCATTCAGTG  >  REL606/554346‑554388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.