New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 187382 = | 110 (1.070) | 13 (0.150) | 3/40 | NT | 14.9% | coding (530/813 nt) | yaeI | predicted phosphatase |
? | REL606 | 3669194 = | 57 (0.670) | coding (1242/2031 nt) | malS | periplasmic alpha‑amylase precursor |
Only 100 of 186 total aligned reads displayed.
TGCCAGCATCAGTCTTGGCAGATTTGCTTCGCTGGCGGGAGGTGGTTTGCATTGTCCGGCCCATAAGTC > REL606/187348‑187416 | cattttgtttttatagaacacaggcagaccagaag > 1:9430612‑M1/35‑35 (MQ=255) gCCAGCATCAGTCTTGGCAGATTTGCTTCGCTGGc > 1:3449461/1‑35 (MQ=255) gCCAGCATCAGTCTTGGCAGATTTGCTTCGCTGGc > 1:2986150/1‑35 (MQ=255) gCCAGCATCAGTCTTGGCAGATTTGCTTCGCTGGc > 1:11297480/1‑35 (MQ=255) attttgtttttatagaacaccggcagaccagaaGc < 1:1617130‑M1/2‑1 (MQ=255) attttgtttttatagaacaccggcagaccagaaGc < 1:8784817‑M1/2‑1 (MQ=255) ttttgtttttatagaacaccggcagaccagaaGCg > 1:19512655‑M1/33‑35 (MQ=255) ttttgtttttatagaacaccggcagaccagaaGCg > 1:16766596‑M1/33‑35 (MQ=255) ttttgtttttatagaacaccggcagaccagaaGCg > 1:16106640‑M1/33‑35 (MQ=255) ccAGCATCAGTCTTGGCAGATTTGCTTCGCTGGCg < 1:13163292/35‑1 (MQ=255) ccAGCATCAGTCTTGGCAGATTTGCTTCGCTGGCg > 1:10058323/1‑35 (MQ=255) tttgtttttatagaacaccggcagaccagaaGCgg < 1:2737740‑M1/4‑1 (MQ=255) tttgtttttatagaacaccggcagaccagaaGCgg > 1:20128452‑M1/32‑35 (MQ=255) tttgtttttatagaacaccggcagaccagaaGCgg < 1:18250113‑M1/4‑1 (MQ=255) tttgtttttatagaacaccggcagaccagaaGCgg < 1:14505979‑M1/4‑1 (MQ=255) tttgtttttatacaacaccggcagaccagaaGCgg > 1:5217732‑M1/32‑35 (MQ=255) cAGCATCAGTCTTGGCAGATTTGCTTCGCTGGCgg < 1:19731651/35‑1 (MQ=255) cAGCATCAGTCTTGGCAGATTTGCTTCGCTGGCgg < 1:7186305/35‑1 (MQ=255) agaaTCAGTCTTGGCAGATTTGCTTCGCTGGCggg < 1:18143765/32‑1 (MQ=255) aGCATCAGTCTTGGCAGATTTGCTTCGCTGGCggg < 1:20581813/35‑1 (MQ=255) tgtttttatagaacaccggcagaccagaaGcgggg < 1:20355427‑M1/6‑2 (MQ=255) tgtttttatagaacaccggcagaccagaaGcgggg < 1:5869020‑M1/6‑2 (MQ=255) gCATCAGTCTTGGCAGATTTGCTTCGCTGGCgggg > 1:6020576/1‑34 (MQ=255) gCATCAGTCTTGGCAGATTTGCTTCGCTGGCGGGa < 1:3146411/35‑1 (MQ=255) gCATCAGTCTTGGCAGATTTGCTTCGCTGGCGGGa < 1:19005088/35‑1 (MQ=255) gCATCAGTCTTGGCAGATTTGCTTCGCTGGCGGGa < 1:8752445/35‑1 (MQ=255) gCATCAGTCTTGGCAGATTTGCTTCGCCGGCgggg > 1:7025696/1‑34 (MQ=255) cATCAGTCTTGGCAGATTTGCTTCGCTGGCggggg > 1:3325156/1‑33 (MQ=255) aTCAGTCTTGGCAGATTTGCTTCGCTGGCGGGGgg > 1:13479194/1‑35 (MQ=255) ttttatagaacaccggcagaccagaaGCGGGGggt < 1:11961795‑M1/9‑1 (MQ=255) tCAGTCTTGGCAGATTTGCTTCGCTGGCGGGAggt < 1:8255925/35‑1 (MQ=255) tCAGTCTTGGCAGATTTGCTTCGCTGGCGGGAggt < 1:13555792/35‑1 (MQ=255) tttatagaacaccggcagaccagaaGCGGgagggg < 1:14821356‑M1/10‑3 (MQ=255) cAGTCTTGGCAGATTTGCTTCGCTGGCGGGGgggg > 1:4778953/1‑33 (MQ=38) cAGTCTTGGCAGATTTGCTTCGCTGGCGGGAggtg < 1:19631414/35‑1 (MQ=255) cAGTCTTGGCAGATTTGCTTCGCTGGCGGGAggtg < 1:8729151/35‑1 (MQ=255) aGTCTTGGCAGATTTGCTTCGCTGGCGGGGggggg > 1:7697220/1‑35 (MQ=37) aGTCTTGGCAGATTTGCTTCGCTGGCGGGGggggg > 1:19244791/1‑35 (MQ=37) tCTTGGCAGATTTGCTTCGCTGGCGGGGggggggt > 1:11772001/1‑33 (MQ=25) tCTTGGCAGATTTGCTTCGCTGGCGGGGggggggt > 1:17628158/1‑33 (MQ=25) tCTTGGCAGATTTGCTTCGCTGGCGGGAGGTGGtt < 1:925795/35‑1 (MQ=255) tCTTGGCAGATTTGCTTCGCTGGCGGGAGGTGGtt < 1:1716999/35‑1 (MQ=255) tCTTGGCAGATTTGCTTCGCTGGCGGGAGGTGGtt < 1:4909951/35‑1 (MQ=255) atagaacaccggcagaccagaaGCGGGAGGTGGtt < 1:5416776‑M1/13‑1 (MQ=255) tagaacaccggcagaccagaaGCGGGAGGTTGttt < 1:13435265‑M1/14‑1 (MQ=255) tagaacaccggcagaccagaaGCGGGAGGTGGttt < 1:16852821‑M1/14‑1 (MQ=255) tagaacaccggcagaccagaaGCGGGAGGTGGttt < 1:13339535‑M1/14‑1 (MQ=255) cTTGGCAGATTTGCTTCGCTGGCGGGGGGGGGgtt > 1:13980040/1‑35 (MQ=25) cTTGGCAGATTTGCTTCGCTGGCGGGAggtggggt > 1:12748306/1‑32 (MQ=255) cTTGGCAGATTTGCTTCGCTGGCGGGAGGTGGttt < 1:1510314/35‑1 (MQ=255) cTTGGCAGATTTGCTTCGCTGGCGGGAGGTGGttt < 1:16934654/35‑1 (MQ=255) ttGGCAGATTTGCTTCGCTGGCGGGGGGGGGgttt > 1:2317841/1‑34 (MQ=25) ttGGCAGATTTGCTTCGCTGGCGGGGGGGGGGTTg > 1:8531114/1‑35 (MQ=25) ttGGCAGATTTGCTTCGCTGGCGGGAGGTGGTTTg < 1:9280783/35‑1 (MQ=255) ttGGCAGATTTGCTTCGCTGGCGGGAGGTGGTTTg < 1:2600141/35‑1 (MQ=255) ttGGCAGATTTGCTTCGCTGGCGGGAGGTGGTTTg < 1:16318343/35‑1 (MQ=255) ttGGCAGATTTGCTTCGCTGGCGGGAGGTGGTTTg < 1:13707037/35‑1 (MQ=255) tGGCAGATTTGCTTCGCTGGCGGGGGGTGGGTTGc > 1:18386894/1‑35 (MQ=37) tGGCAGATTTGCTTCGCTGGCGGGGGGGTGTTTgg > 1:3235693/1‑34 (MQ=25) tGGCAGATTTGCTTCGCTGGCGGGGGGGGGgtttt > 1:16636188/1‑33 (MQ=21) tGGCAGATTTGCTTCGCTGGCGGGGGGGGGGTTgg > 1:15563104/1‑34 (MQ=25) tGGCAGATTTGCTTCGCTGGCGGGGGGGGGGTTGc > 1:15340344/1‑35 (MQ=25) tGGCAGATTTGCTTCGCTGGCGGGAGGTGGTTTGc < 1:8363944/35‑1 (MQ=255) tGGCAGATTTGCTTCGCTGGCGGGAGGTGGTTTGc < 1:6773426/35‑1 (MQ=255) tGGCAGATTTGCTTCGCTGGCGGGAGGTGGTTTGc < 1:9748479/35‑1 (MQ=255) tGGCAGATTTGCTTCGCTGGCGGGAGGTGGTTTGc < 1:16017388/35‑1 (MQ=255) gaacacctgcagaccagaaGCGGGAGGTGGTTtgg < 1:16269114‑M1/16‑2 (MQ=255) aacaccggcagaccagaaGCGGGAGGTGGTttggg < 1:4046951‑M1/17‑3 (MQ=255) aacaccggcagaccagaaGCGGGAGGTGGTttggg < 1:5142193‑M1/17‑3 (MQ=255) aacaccggcagaccagaaGCGGGAGGTGGTttggg < 1:19612017‑M1/17‑3 (MQ=255) gCAGATTTGCTTCGCTGGCGGGGGGTGGGTTGcca > 1:1722782/1‑33 (MQ=25) gCAGATTTGCTTCGCTGGCGGGAGGTGGTTTGCAt < 1:14333767/35‑1 (MQ=255) gCAGATTTGCTTCGCTGGCGGGAGGTGGTTTGCAt < 1:7297249/35‑1 (MQ=255) cAGATTTGCTTCGCTGGCGGGAGGTGGTTTGCAtt < 1:10168446/35‑1 (MQ=255) cAGATTTGCTTCGCTGGCGGGAGGTGGTTTGCAtt < 1:4813626/35‑1 (MQ=255) cAGATTTGCTTCGCTGGCGGGAGGTGGGTTTCAtt > 1:8853559/1‑35 (MQ=37) aGATTTGCTTCGCTGGCGGGAGGTGGTTTGCATTg < 1:18578107/35‑1 (MQ=255) aGATTTGCTTCGCTGGCGGGAGGTGGTTTGCATTg < 1:18051632/35‑1 (MQ=255) aGATTTGCTTCGCTGGCGGGAGGGGGTTTTCATTg > 1:3943766/1‑35 (MQ=37) gATTTGCTTCGCTGGCGGGGGGTGGTTTGCAtttt > 1:627644/1‑33 (MQ=38) atcttGCTTCGCTGGCGGGAGGTGGTTTGCATTGt < 1:9564878/32‑1 (MQ=255) aTTTGCTTCGCTGGCGGGAGGTGGTTTGCATTGTc < 1:15635568/35‑1 (MQ=255) aTTTGCTTCGCTGGCGGGAGGTGGTTTGCATTGTc < 1:15868086/35‑1 (MQ=255) ttGCTTCGCTGGCGGGAGGTGGTTTGCATTGTCCg < 1:12949992/35‑1 (MQ=255) ttGCTTCGCTGGCGGGAGGTGGTTTGCATTGTCCg < 1:14246276/35‑1 (MQ=255) tGCTTCGCTGGCGTGAGGTGGTTTGCATTGTCCgg > 1:10808209/1‑35 (MQ=255) tGCTTCGCTGGCGGGAGGTGGTTTGCATTGTCCgg < 1:6487501/35‑1 (MQ=255) tGCTTCGCTGGCGGGAGGTGGTTTGCATTGTCCgg < 1:14730059/35‑1 (MQ=255) cTTCGCTGGCGGGAGGTGGTTTGCATTGTCCGGcc < 1:12083518/35‑1 (MQ=255) ttCGCTGGCGGGAGGTGGTTTGCATTGTCCGGccc < 1:3550097/35‑1 (MQ=255) ttCGCTGGCGGGAGGTGGTTTGCATTGTCCGGccc < 1:4636389/35‑1 (MQ=255) tCGCTGGCGGGAGGTGGTTTGCATTGTCCGGCCCa < 1:8628622/35‑1 (MQ=255) tCGCTGGCGGGAGGTGGTTTGCATTGTCCGGCCCa < 1:4102754/35‑1 (MQ=255) tCGCTGGCGGGAGGTGGTTTGCATTGTCCGGCCCa < 1:4387218/35‑1 (MQ=255) cGCTGGCGGGAGGTGGTTTGCATTGTCCGGCCCAt < 1:611072/35‑1 (MQ=255) cGCTGGCGGGAGGTGGTTTGCATTGTCCGGCCCAt < 1:10786508/35‑1 (MQ=255) cGCTGGCGGGAGGTGGTTTGCATTGTCCGGCCCAt < 1:17975240/35‑1 (MQ=255) gCTGGCGGGAGGTGGTTTGCATTGTCCGGCCCATa < 1:10720243/35‑1 (MQ=255) ggCGGGAGGTGGTTTGCATTGTCCGGCCCATAAGt < 1:17482936/35‑1 (MQ=255) GCGGGAGGTGGTTTGCATTGTCCGGCCCATAAGTc < 1:2555609‑M1/35‑1 (MQ=255) | TGCCAGCATCAGTCTTGGCAGATTTGCTTCGCTGGCGGGAGGTGGTTTGCATTGTCCGGCCCATAAGTC > REL606/187348‑187416 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |