New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1050924 = | 43 (0.420) | 6 (0.070) | 4/40 | NT | 9.8% | coding (580/1794 nt) | hyaB | hydrogenase 1, large subunit |
? | REL606 | 1543472 = | 75 (0.880) | coding (969/1536 nt) | xasA | predicted glutamate:gamma‑aminobutyric acid antiporter |
Only 100 of 103 total aligned reads displayed.
CCGCAATGGCTACTGGGGGCACCCGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCA > REL606/1050890‑1050958 | ccGCAATGGCTACTGGGGGCACCCGCAGTACAAA‑c < 1:1765666/35‑1 (MQ=255) ccGCAATGGCTACTGGGGGCACCCGCAGTACAAA‑c < 1:10967576/35‑1 (MQ=255) ttctcgcgggatgtatgtcacagcgcagaaaaacc < 1:12028257‑M1/1‑1 (MQ=255) ttctcgcgggatgtatgtcacagcgcagaaaaacc < 1:5295241‑M1/1‑1 (MQ=255) cccAATGGCTACTGGGGGCACCCGCAGTACAAA‑Ct < 1:11226266/33‑1 (MQ=255) cGCAATGGCTACTGGGGGCACCCGCAGTACAAA‑Ct < 1:9816730/35‑1 (MQ=255) cGCAATGGCTACTGGGGGCACCCGCAGTACAAA‑Ct < 1:19706768/35‑1 (MQ=255) cGCAATGGCTACTGGGGGCACCCGCAGTACAAA‑Ct < 1:16117566/35‑1 (MQ=255) cGCAATGGCTACTGGGGGCACCCGCAGTACAAA‑Ct < 1:6990855/35‑1 (MQ=255) tctcgcgggatgtatgtcacagcgcagaaaaacCt < 1:3931588‑M1/2‑1 (MQ=255) tctcgcgggatgtatgtcacagcgcagaaaaacCt > 1:16178126‑M1/34‑35 (MQ=255) tctcgcgggatgtatgtcacagcgcagaaaaacCt < 1:4947865‑M1/2‑1 (MQ=255) tctcgcgggatgtatgtcacagcgcagaaaaacCt > 1:4967064‑M1/34‑35 (MQ=255) tctcgcgggatgtatgtcacagcgcagaaaaacCt > 1:577641‑M1/34‑35 (MQ=255) tctcgcgggatgtatgtcacagcgcagaaaaacCt > 1:6570085‑M1/34‑35 (MQ=255) tctcgcgggacgtatgtcacagcgcagaaaaacCt < 1:1893952‑M1/2‑1 (MQ=255) ctcgcgggatgtatgtcacagcgcagaaaaacCTg > 1:14054279‑M1/33‑35 (MQ=255) ctcgcgggatgtatgtcacagcgcagaaaaacCTg < 1:20433569‑M1/3‑1 (MQ=255) ctcgcgggatgtatgtcacagcgcagaaaaacCTg < 1:3357710‑M1/3‑1 (MQ=255) ctcgcgggatgtatgtcacagcgcagaaaaacCTg > 1:4176488‑M1/33‑35 (MQ=255) ctcgcgggatgtatgtcacagcgcagaaaaacCTg > 1:7340066‑M1/33‑35 (MQ=255) cAATGGCTACTGGGGGCACCCGCAGTACAAA‑CTgc < 1:15816263/35‑1 (MQ=255) tcgcgggatgtatgtcacagcgcagaaaaacCTgc < 1:50841‑M1/4‑1 (MQ=255) aCTGGGGGCACCCGCAGTACAAA‑CTGCCGCCAGaa > 1:7568102/1‑35 (MQ=255) aCTGGGGGCACCCGCAGTACAAA‑CTGCCGCCAGaa > 1:4620649/1‑35 (MQ=255) aCTGGGGGCACCCGCAGTACAAA‑CAGACGCCAGaa > 1:709798/1‑35 (MQ=25) ttGGGGGCACCCGCAGTACAAA‑CTGCCGCCAGAAg > 1:15703798/2‑35 (MQ=255) tGGGGGCACCCGCAGTACAAA‑CTGCCGCCAGAAGc > 1:15808347/1‑35 (MQ=255) gggggCACCCGCAGTACAAA‑CTGCCGCCAGAAGCt > 1:17987633/1‑35 (MQ=255) gggCACCCGCAGTAC‑AA‑CTGCCGCCAGAAGCTAAc > 1:11311464/1‑35 (MQ=38) gggCACCCGAAGTACAAA‑CTGCAGCCAGAAGCTaa < 1:20369054/35‑1 (MQ=38) ggCACCCGCAGTACAAA‑CTGCCGCCAGAAGCTAAc > 1:19682525/1‑35 (MQ=255) ggCACCCGCAGTACAAA‑CTGCCGCCAGAAGCTAAc > 1:7119356/1‑35 (MQ=255) gCACCCGCAGTACAAA‑CTGCCGCCAGAAGCTAAcc > 1:18387331/1‑35 (MQ=255) gCACCCGCAGTACAAA‑CTGCAGCCAGAAGCTAAcc < 1:2133922/35‑1 (MQ=255) cccccGAAGTAAAAC‑CTGCCGCCAGAAGCTAACCt < 1:19119832/33‑1 (MQ=21) aCCTGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTg > 1:16682097/1‑35 (MQ=255) aCCCGCAGTACAAA‑CTGCCGCCCGAAGCTAACCTg > 1:261060/1‑35 (MQ=255) aCCCGCAGTACAAA‑CTGCCGCCCGAAGCTAACCTg > 1:15010085/1‑35 (MQ=255) aCCCGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTg > 1:5995201/1‑35 (MQ=255) aCCCGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTg > 1:10790312/1‑35 (MQ=255) aCCCGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTg > 1:7625129/1‑35 (MQ=255) aCCCGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTg > 1:14378335/1‑35 (MQ=255) aCCCGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTg > 1:1137959/1‑35 (MQ=255) cccGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTGa > 1:20591091/1‑35 (MQ=255) ccGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTGAt > 1:7256880/1‑35 (MQ=255) cGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTGATg > 1:15494812/1‑35 (MQ=255) cGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTGATg > 1:19856245/1‑35 (MQ=255) cGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTGATg > 1:10656108/1‑35 (MQ=255) gCAGTACAAA‑CTGCCGCCAGAATCTAACCTGATgg > 1:14344333/1‑35 (MQ=255) gCAGTACAAA‑CTGCCGCCAGAAGCTAACCTGATgg > 1:20353245/1‑35 (MQ=255) gCAGTACAAA‑CTGCCGCCAGAAGCTAACCTGATgg > 1:19414650/1‑35 (MQ=255) gCAGTACAAA‑CTGCCGCCAGAAGCTAACCTGATgg > 1:19258003/1‑35 (MQ=255) gCAGTACAAA‑CTGCCGCCAGAAGCTAACCTGATgg > 1:12868678/1‑35 (MQ=255) gcataaaaacCTGCCGCCAGAAGCTAACCTGATgg > 1:8598559‑M1/11‑35 (MQ=255) cAGTACAAA‑CTGCCGCCAGAAGCTAACCTGATggg > 1:10714861/1‑35 (MQ=255) cAGTACAAA‑CTGCCGCCAGAAGCTAACCTGATggg > 1:10963759/1‑35 (MQ=255) cAGTACAAA‑CTGCCGCCAGAAGCTAACCTGATggg > 1:5174162/1‑35 (MQ=255) aagaaaaacCGGCCGCCAGAAGCTAACCTGATggg > 1:3673906‑M1/10‑35 (MQ=255) aGTACAAA‑CTGCCGCCAGAAGCTAACCTGATggtc > 1:14442746/1‑33 (MQ=255) aGTACAAA‑CTGCCGCCAGAAGCTAACCTGATGGGc > 1:12398272/1‑35 (MQ=255) aGTACAAA‑CTGCCGCCAGAAGCTAACCTGATGGGc > 1:15288228/1‑35 (MQ=255) aGTACAAA‑CTGCCGCCAGAAGCTAACCTGATGGGc > 1:1955557/1‑35 (MQ=255) gTACAAA‑CTGCCGCCAGAAGCTAACCTGATGGGCt > 1:13543903/1‑35 (MQ=255) gTACAAA‑CTGCCGCCAGAAGCTAACCTCATGGGCt > 1:8325417/1‑35 (MQ=255) atACAAACCTGCCGCCAGAAGCTAACCTGATGGGc < 1:15756797/34‑1 (MQ=25) agaaaaacCTGCCGCCAGAAGCTAACCTGATGGGc > 1:1695568‑M1/9‑35 (MQ=255) taaaaacCTGCCGCCAGAAGCTAACCTGATGGGCt > 1:12317471‑M1/8‑35 (MQ=255) tACAAA‑CTGCCGCCAGAAGCTAACCTGATGGGCtt > 1:7050930/1‑35 (MQ=255) gaaaaacCTGCCGCCAGAAGCTAACCTGATGGGCt > 1:2498755‑M1/8‑35 (MQ=255) aaCAAC‑CTGCCGCCAGAAGCTAACCTGATGGGcgt < 1:1463612/34‑3 (MQ=25) aaaaacCTGCCGCCAGAAGCTAACCTGATGGGCtt > 1:5579537‑M1/7‑35 (MQ=255) aaaaa‑ATGCCGCCAGAAGCTAACCTGATGGGCttt < 1:2551140/33‑1 (MQ=38) aCAAA‑CTGCCGCCAGAAGCTAACCTGATGGGCttt > 1:6412538/1‑35 (MQ=255) aCAAA‑CTGCCGCCAGAAGCTAACCTGATGGGCttt > 1:148330/1‑35 (MQ=255) cAAA‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTg > 1:10535864/1‑35 (MQ=255) cAAA‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTg > 1:4206806/1‑35 (MQ=255) cAAA‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTg > 1:19951622/1‑35 (MQ=255) cAAA‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTg > 1:5899955/1‑35 (MQ=255) cAAA‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTg > 1:18757976/1‑35 (MQ=255) cAAA‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTg > 1:2037951/1‑35 (MQ=255) acaacCTGCCGCCAGAAGCTAACCTGATGGGCttt > 1:8452009‑M1/6‑35 (MQ=255) aaaacCTGCCGCCAGAAGCTAACCTGATGGGCttt > 1:14019352‑M1/6‑35 (MQ=255) aaacCTGCCGCCAGAAGCTAACCTGATGGGCTTTg > 1:1929828‑M1/5‑35 (MQ=255) aaacCTGCCGCCAGAAGCTAACCTGATGGGCTTTg > 1:4022043‑M1/5‑35 (MQ=255) aaa‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTGc > 1:16381188/1‑35 (MQ=255) aaa‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTGc > 1:15766039/1‑35 (MQ=255) aaa‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTGc > 1:14903829/1‑35 (MQ=255) aa‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTGcc > 1:18313465/1‑35 (MQ=255) aa‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTGcc > 1:5997021/1‑35 (MQ=255) aa‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTGcc > 1:12083906/1‑35 (MQ=255) acCTGCCGCCAGAAGCTAACCTGATGGGCTttgac > 1:18608517‑M1/3‑33 (MQ=255) acCTCCCGCCAGAAGCTAACCTGATGGGCTTTGcc > 1:1977307‑M1/3‑35 (MQ=255) a‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTTccc > 1:18949899/1‑35 (MQ=255) a‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTGccc > 1:6366941/1‑35 (MQ=255) a‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTGccc > 1:16895369/1‑35 (MQ=255) a‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTGccc > 1:14377433/1‑35 (MQ=255) cCTCCCGCCAGAAGCTAACCTGATGGGCTTTGccc > 1:8813202‑M1/2‑35 (MQ=255) CTGCCGCCAGAAGCTAACCTTATGGGCTTTGCCCa < 1:16700321‑M1/35‑1 (MQ=255) CTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCa > 1:5641613‑M1/1‑35 (MQ=255) | CCGCAATGGCTACTGGGGGCACCCGCAGTACAAA‑CTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCA > REL606/1050890‑1050958 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |