New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2064682 = | 77 (0.750) | 9 (0.110) | 3/38 | NT | 10.8% | coding (595/1218 nt) | wcaC | predicted glycosyl transferase |
? | REL606 | = 3433062 | 88 (1.080) | pseudogene (399/621 nt) | yhfS | putative enzyme; b3376_1 |
Only 100 of 160 total aligned reads displayed.
GCTTTTGCGCCTCTTCCAGCACTCTGGCGGCAATCGGCTGATGAAACTCGACAATCAACACCTTCGACT > REL606/3433028‑3433096 | gcTTTTGCGCCTCTTCCAGCACTCTGGCGGCAATc > 1:13732954/1‑35 (MQ=255) cTTTTGCGCCTCTTCCAGCACTCTGGCGGCAATCg > 1:10053085‑M2/1‑34 (MQ=255) cTTTTGCGCCTCTTCCAGCACTCTGGCGGCAATCg > 1:5399197‑M2/1‑34 (MQ=255) cTTTGGCGCCTCTTCCAGCGCTCTGGCGGCAATCg < 1:19404839/35‑1 (MQ=25) ttttGCGCCTCTTCCAGCACTCTGGCGGCAATCgg < 1:10215943‑M2/35‑3 (MQ=255) ttttGCGCCTCTTCCAGCACTCTGGCGGCAATCgg > 1:3141308‑M2/1‑33 (MQ=255) ttttGCGCCTCTTCCAGCACTCTGGCGGCAATCgg < 1:4138472‑M2/35‑3 (MQ=255) ttttGCGCCTCTTCCAGCACTCTGGCGGCAATCgg > 1:8009132‑M2/1‑33 (MQ=255) ttttGCGCCTCTTCCAGCACTCTGGCGGCAATCgg > 1:13137954‑M2/1‑33 (MQ=255) tttGCGCCTCTTCCAGCACTCTGGCGGCAATCggc > 1:19575113‑M2/1‑32 (MQ=255) tttGCGCCTCTTCCAGCACTCTGGCGGCAATCggc < 1:5561104‑M2/35‑4 (MQ=255) tttGCGCCTCTTCCAGCACTCTGGCGGCAATCggc < 1:6281905‑M2/35‑4 (MQ=255) ttGCGCCTCTTCCAGCACTCTGGCGGCAATCggct > 1:20265990‑M2/1‑31 (MQ=255) ttGCGCCTCTTCCAGCACTCTGGCGGCAATCggct < 1:1716092‑M2/35‑5 (MQ=255) cgcCTCTTCCAGCACTCTGGCGGCAATCggctggg < 1:9357627‑M2/35‑8 (MQ=255) cgcCTCTTCCAGCACTCTGGCGGCAATCggctggg < 1:14576504‑M2/35‑8 (MQ=255) cgcCTCTTCCAGCACTCTGGCGGCAATCGGCtgat < 1:11647304/35‑1 (MQ=255) gcCTCTTCCAGCACTCTGGCGGCAATCggctggtt < 1:7886900‑M2/35‑9 (MQ=255) gcCTCTTCCAGCACTCTGGCGGCAATCggctgggg < 1:20414309‑M2/35‑9 (MQ=255) ccTCTTCCAGCACTCTGGCGTCAATCGGCtggtga > 1:9612221/1‑35 (MQ=25) ccTCTTCCAGCACTCTGGCGGCAATCggctggagg < 1:7290745‑M2/35‑10 (MQ=255) ccTCTTCCAGCACTCTGGCGGCAATCGGCtgatga < 1:13103538/35‑1 (MQ=255) ccTCTTCCAGCACTCTGGCGGCAATCGGCtgatga < 1:11294904/35‑1 (MQ=255) ctctTCCAGCACTCTGGCGGCAATCggctggtgga < 1:4494686‑M2/35‑11 (MQ=255) ctctTCCAGCACTCTGGCGGCAATCGGCTGATGaa < 1:15788439/35‑1 (MQ=255) tctTCCAGCACTCTGGCGGCAATCggctgggggaa < 1:15953539‑M2/35‑12 (MQ=255) tctTCCAGCACTCTGGCGGCAATCGGCTGGTGaaa > 1:18400692/1‑35 (MQ=255) tctTCCAGCACTCTGGCGGCAATCGGCTGATGaaa < 1:6387172/35‑1 (MQ=255) ctTCCAGCACTCTGGCGGCAATCGGCTGATGAAAc < 1:19068022/35‑1 (MQ=255) ctTCCAGCACTCTGGCGGCAATCGGCTGATGAAAc < 1:10813568/35‑1 (MQ=255) ttCCAGCTCTCTGGCGGCAATCggctgggggaaac < 1:20059548‑M2/35‑14 (MQ=255) ttCCAGCACTCTGGCTGCAATCggctgggggaaat < 1:3248176‑M2/35‑14 (MQ=255) ttCCAGCACTCTGGCGGCAATCggctgggggaaaa < 1:17052878‑M2/35‑14 (MQ=255) ttCCAGCACTCTGGCGGCAATCggctgagggaaat < 1:4639022‑M2/35‑14 (MQ=255) ttCCAGCACTCTGGCGGCAATCGGCTGATGAAACt < 1:14884237/35‑1 (MQ=255) ttCCAGCACTCTGGCGGCAATCGGCTGATGAAACt < 1:6967984/35‑1 (MQ=255) tCCAGTACTCTGGCGGCAATCGGCTGGGGAAAATc > 1:11541679/1‑35 (MQ=16) tCCAGCACTCTGGCGGCAATCggctgggggaaata < 1:8336365‑M2/35‑15 (MQ=255) tCCAGCACTCTGGCGGCAATCggctggggaaaatc < 1:10470975‑M2/35‑15 (MQ=255) tCCAGCACTCTGGCGGCAATCGGCTGGTGAAAATc > 1:20592981/1‑35 (MQ=25) tCCAGCACTCTGGCGGCAATCGGCTGATGAAACTc < 1:110128/35‑1 (MQ=255) tCCAGCACTCTGGCGGCAATCGGCTGATGAAACTc < 1:9340975/35‑1 (MQ=255) tCCAGCACTCTGGCGGCAATCGGCTGATGAAACTc < 1:19664367/35‑1 (MQ=255) tCCACCACTCTGGCGGCAATCGGCTGATGAAACTc < 1:4217776/35‑1 (MQ=255) ctaGCACTCTGGCGGCAATCGGCTGATGAAACTCg < 1:128393/33‑1 (MQ=255) ccAGCACTCTGGCGGCAATCggctgggggaaatcg < 1:17351053‑M2/35‑16 (MQ=255) ccAGCACTCTGGCGGCAATCGGCTGGTGGAAATCg > 1:8634834/1‑35 (MQ=21) ccAGCACTCTGGCGGCAATCGGCTGATGAAACTca > 1:7603447/1‑34 (MQ=255) ccAGCACTCTGGCGGCAATCGGCTGATGAAACTCg < 1:3552080/35‑1 (MQ=255) ccAGCACTCTGGCGGCAATCGGCTGATGAAACTCg < 1:16187875/35‑1 (MQ=255) ccAGCACTCTGGCGGCAATCGGCTGATGAAACTCg < 1:14435741/35‑1 (MQ=255) cAGCACTCTGGCGGCAATCGGCTGATGAAACTCGa < 1:10498630/35‑1 (MQ=255) cAGCACTCTGGCGGCAATCGGCTGATGAAACTCGa < 1:13517979/35‑1 (MQ=255) aGCACTCTGGCGGCAATCGGCTGGTGAAAATCGAc > 1:3451506/1‑35 (MQ=25) aGCACTCTGGCGGCAATCGGCTGATGAAACTCGAc < 1:844778/35‑1 (MQ=255) aGCACTCTGGCGGCAATCGGCTGATGAAACTCGAc < 1:20136103/35‑1 (MQ=255) aGCACTCTGGCGGCAATCGGCTGATGAAACTCGAc < 1:19656992/35‑1 (MQ=255) aGCACTCTGGCGGCAATCGGCTGATGAAACTCGAc < 1:18926189/35‑1 (MQ=255) gCACTCTGGCGGCAATCGGCTGATGAAACTCGACa < 1:8441474/35‑1 (MQ=255) gCACTCTGGCGGCAATCGGCTGATGAAACTCGACa < 1:6119607/35‑1 (MQ=255) cACTCTGGCGGCAATCGGCTGGTGGAAATCGACaa > 1:5232669/1‑35 (MQ=21) cACTCTGGCGGCAATCGGCTGATGAAACTCGACaa < 1:2410166/35‑1 (MQ=255) aCTCTGGCGGCAATCGGCTGATGAAACTCGACAAt < 1:9854761/35‑1 (MQ=255) aCTCTGGCGGCAATCGGCTGATGAAACTCGACAAt < 1:8398041/35‑1 (MQ=255) aCTCTGGCGGCAATCGGCTGATGAAACTCGACAAt < 1:16894691/35‑1 (MQ=255) ctctGGCGGCAATCGGCTGATGAAACTCGACAATc < 1:16077177/35‑1 (MQ=255) ctctGGCGGCAATCGGCTGATGAAACTCGACAATc < 1:19943303/35‑1 (MQ=255) tctGGCGGCAATCGGCTGATGAGACTCGACAATCa < 1:14869334/35‑1 (MQ=255) tctGGCGGCAATCGGCTGATGAAACTCGACAATCa < 1:13674202/35‑1 (MQ=255) tctGGCGGCAATCGGCTGATGAAACTCGACAATCa < 1:13336007/35‑1 (MQ=255) tctGGCGGCAATCGGCTGATGAAACTCGACAATCa < 1:15075470/35‑1 (MQ=255) ctGGCGGCAATCGGCTGATGAAACTCGACAATCaa < 1:14329132/35‑1 (MQ=255) tGGCGGCAATCGGCTGATGAAACTCGACAATCAac < 1:18132082/35‑1 (MQ=255) tGGCGGCAATCGGCTGATGAAACTCGACAATCAac < 1:9043095/35‑1 (MQ=255) ggcggcAATCGGCTGATGAAACTCGACAATCAaca < 1:16656903/35‑1 (MQ=255) ggcggcAATCGGCTGATGAAACTCGACAATCAaca < 1:6549690/35‑1 (MQ=255) gcggcAATCGGCTGATGAAACTCGACAATCAacac < 1:9694008/35‑1 (MQ=255) gcggcAATCGGCTGATGAAACTCGACAATCAacac < 1:20123326/35‑1 (MQ=255) gcggcAATCGGATGATGAAACTCGACAATCAacac < 1:7783405/35‑1 (MQ=255) gaggcAATCGGCTGATGAAACTCGACAATCAacac < 1:5011747/33‑1 (MQ=255) gggcAATCGGCTGATGAAACTCGACAATCAACAcc < 1:10668225/34‑1 (MQ=255) cggcAATCGGCTGATGAAACTCGACAATCAACAcc < 1:14804410/35‑1 (MQ=255) cggcAATCGGCTGATGAAACTAGACAATCAACAcc < 1:12348590/35‑1 (MQ=255) ggcAATCGGCTGATGAAACTCGACAATCAacacat < 1:4400352/35‑3 (MQ=255) ggcAATCGGCTGATGAAACTCGACAATCAACACCt < 1:12360391/35‑1 (MQ=255) cAATCTGCTGATGAAACTCGACAATCAACACCTTc > 1:17740972/1‑35 (MQ=255) cAATCGGCTTATGAAACTCGACAATCAACACCTTc > 1:13329380/1‑35 (MQ=255) cAATCGGCTGATGAAACTCGACAATCAACACCTTc < 1:15451179/35‑1 (MQ=255) cAATCGGCTGATGAAACTCGACAATCAACACCTTc < 1:9181627/35‑1 (MQ=255) cAATCGGCTGATGAAACTCGACAATCAACACCTTc < 1:11032502/35‑1 (MQ=255) cAATCGGCTGATGAAACTCGACAATAAACACCTTc < 1:14660379/35‑1 (MQ=255) aaTCGGCTGATGAAACTCGACAATCAACACCTTCg < 1:2755020/35‑1 (MQ=255) aaTCGGCTGATGAAACTCGACAATCAACACCTTCg > 1:15709080/1‑35 (MQ=255) aTCGGCTGATGAAACTCGACAATCAACACCTTCGa < 1:15090954/35‑1 (MQ=255) aTCGGCTGATGAAACTCGACAATCAACACCTTCGa < 1:4184173/35‑1 (MQ=255) cGGCTGATGAAACTCGACAATCAACACCTTCGACt < 1:14347430/35‑1 (MQ=255) cGGCTGATGAAACTCGACAATCAACACCTTCGACt > 1:2417863/1‑35 (MQ=255) cGGCTGATGAAACTCGACAATCAACACCTTCGACt < 1:19902467/35‑1 (MQ=255) cGGCTGATGAAACTCGACAATCAACACCTTCGACt < 1:4726343/35‑1 (MQ=255) cGGCTGATGAAACTCGACAATCAACACCTTCGACt < 1:1060879/35‑1 (MQ=255) | GCTTTTGCGCCTCTTCCAGCACTCTGGCGGCAATCGGCTGATGAAACTCGACAATCAACACCTTCGACT > REL606/3433028‑3433096 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |