New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 2768160116 (1.130)20 (0.210) 7/44 NT 16.8% coding (39/324 nt) ygbE conserved inner membrane protein
?REL606 4085858 = 92 (0.980)intergenic (+56/‑93) cpxP/fieF periplasmic protein combats stress/ferrous iron efflux protein F

AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2768125‑2768160
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGGGGTTTTTTTTATC  >  REL606/4085858‑4085872
                                                   
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  >  1:561656/1‑35
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  >  1:591266/1‑35
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  >  1:17596281/1‑35
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  <  1:4227331/35‑1
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  >  1:7455304/1‑35
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  >  1:14166280/1‑35
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  <  1:12349022/35‑1
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  <  1:12348078/35‑1
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  <  1:11889562/35‑1
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  >  1:11887325/1‑35
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  >  1:19537431/1‑35
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  <  1:188537/35‑1
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  <  1:10360936/35‑1
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT                  >  1:9940882/1‑35
 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG                 <  1:9495788/35‑1
 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG                 <  1:12616696/35‑1
 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG                 <  1:9239086/35‑1
 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG                 >  1:385614/1‑35
 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG                 >  1:3627922/1‑35
 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG                 >  1:7732381/1‑35
 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG                 >  1:10340681/1‑35
 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG                 >  1:18725541/1‑35
  TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG                >  1:4962658/1‑35
  TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG                >  1:17308888/1‑35
  TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG                >  1:1719083/1‑35
  TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG                >  1:16085740/1‑35
  TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG                >  1:6790379/1‑35
  TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG                >  1:13809819/1‑35
  TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG                >  1:10252098/1‑35
   GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGt               >  1:18631209/1‑34
   GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG               >  1:3618251/1‑35
   GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG               >  1:18614003/1‑35
   GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG               >  1:4685313/1‑35
   GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG               >  1:680566/1‑35
   GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG               >  1:8750485/1‑35
   GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG               >  1:1187472/1‑35
   GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG               >  1:10470734/1‑35
    ACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGGG              >  1:9621143/1‑35
    ACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGGG              >  1:10110961/1‑35
     CCATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGG             >  1:2238830/1‑35
     CCATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGG             >  1:10698812/1‑35
     CCATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGG             >  1:15013449/1‑35
      CATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGT            >  1:12770353/1‑35
      CATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGT            >  1:8384492/1‑35
      CATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGT            >  1:17208812/1‑35
      CATGTCGTTTCTTCATCCTCAGTAAGGCTGGGGGT            >  1:9937418/1‑35
       ATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGttg           >  1:7815673/1‑32
       ATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGTa           >  1:4366898/1‑34
       ATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGTT           >  1:19756615/1‑35
        TGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGTgt          >  1:3800232/1‑33
        TGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGTTT          >  1:15621443/1‑35
         GTGGTTTCTTCATCCTCAGTAAGGCTGGGGGTTTT         >  1:3931316/1‑35
          TGGTTTCTTCATCCTCAGTAAGGCTGGGGTTTTTT        >  1:15433196/1‑35
          TGGTTTCTTCATCCTCAGTAAGGCTGGGGGTTTTT        >  1:11784946/1‑35
          TGGTTTCTTCATCCTCAGTAAGGCTGGGGGTTTTT        >  1:19651193/1‑35
          TGGTTTCTTCATCCTCAGTAAGGCTGGGGGTTTTT        >  1:19951901/1‑35
           GGTTTCTTCATCCTCAGTAAGGCTGGGGTTTTTTT       >  1:17889156/1‑35
           GGTTTCTTCATCCTCAGTAAGGCTGGGGTTTTTTT       >  1:9421558/1‑35
           GGTTTCTTCATCCTCAGTAAGGCTGGGGGTTTTTT       >  1:16438728/1‑35
           GGTTTCTTCATCCTCAGTAAGGCTGGGGGTCTTTT       >  1:19291062/1‑35
            GTTTCTTCATCCTCAGTAAGGCTGGGGTTTTTTTT      >  1:19281010/1‑35
            GTTTCTTCATCCTCAGTAAGGCTGGGGGTTTTTTT      >  1:15192530/1‑35
            GTTTCTTCATCCTCAGTAAGGCTGGGGGTTTTTTT      >  1:7969943/1‑35
            GTTTCTTCATCCTCAGTAAGGCTGGGGGTCTTTTT      >  1:17830888/1‑35
             TTTCTTCATCCTCAGTAAGGCTGGGGGTTTTTTTT     >  1:6105733/1‑35
              TTCTTCATCCTCAGTAAGGCTGGGGGTTTTTTTTt    >  1:6902834/1‑34
              TTCTTCATCCTCAGTAAGGCTGGGGGTTTTTTTTt    >  1:13402392/1‑34
              TTCTTCATCCTCAGTAAGGCTGGGGGTATTTTTTt    >  1:4182515/1‑34
                CTTCATCCTCAGTAAGGCTGGGGGTTTTTTTTttt  >  1:4603767/1‑32
                                                   
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2768125‑2768160
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGGGGTTTTTTTTATC  >  REL606/4085858‑4085872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.