New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 365501 = | 115 (1.120) | 5 (0.060) | 3/40 | NT | 6.1% | coding (1217/1221 nt) | sbmA | predicted transporter |
? | REL606 | = 3726074 | 57 (0.670) | coding (49/1545 nt) | yibO | phosphoglyceromutase |
Only 100 of 231 total aligned reads displayed.
GGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCT > REL606/365467‑365535 | ggTGACAAAATTCAGGAAGTAACCCATACCTTGAg > 1:17276410/1‑35 (MQ=255) ggTGACAAAATTCAGGAAGTAACCCATACCTTGAg < 1:12607316/35‑1 (MQ=255) ggTGACAAAATTCAGGAAGTAACCCATACCTTGAg > 1:7876293/1‑35 (MQ=255) aaacctatggtactggtgattctggatggctatgg > 1:18226268‑M1/35‑35 (MQ=255) aaacctatggtactggtgattctggatggctatgg > 1:6745865‑M1/35‑35 (MQ=255) aaacctatggtactggtgattctggatggctatgg > 1:14188222‑M1/35‑35 (MQ=255) gTGACAAAATTCAGGAAGTAACCCATACCTTGAGc > 1:2215647/1‑35 (MQ=255) gTGACAAAATTCAGGAAGTAACCCATACCTTGAGc < 1:2612850/35‑1 (MQ=255) gTGACAAAATTCAGGAAGTAACCCATACCTTGAGc < 1:861397/35‑1 (MQ=255) gTGACAAAATTCAGGAAGTAACCCATACCTTGAGc < 1:7348722/35‑1 (MQ=255) aacctatggtactggtgattctggatggctatggc > 1:1536955‑M1/34‑35 (MQ=255) aacctatggtactggtgattctggatggctatggc < 1:12087621‑M1/2‑1 (MQ=255) aacctatggtactggtgattctggatggctatggc > 1:13070369‑M1/34‑35 (MQ=255) tGACAAAATTCAGGAAGTAACCCATACCTTGAGCt < 1:20183658/35‑1 (MQ=255) tGACAAAATTCAGGAAGTAACCCATACCTTGAGCt > 1:19953207/1‑35 (MQ=255) tGACAAAATTCAGGAAGTAACCCATACCTTGAGCt > 1:13155119/1‑35 (MQ=255) acctatggtactggtgattctggatggctatgggt < 1:2515620‑M1/3‑3 (MQ=255) acctatggtactggtgattctggatggctatggct < 1:11883301‑M1/3‑1 (MQ=255) acctatggtactggtgattctggatggctatggct < 1:13225122‑M1/3‑1 (MQ=255) acctatggtactggtgattctggatggctatggct < 1:18911531‑M1/3‑1 (MQ=255) gACAAAATTCAGGAAGTAACCCATACCTTGAGCTa < 1:5924127/35‑1 (MQ=255) gACAAAATTCAGGAAGTAACCCATACCTTGAGCTa < 1:16364577/35‑1 (MQ=255) cctatggtactggtgattctggatggctatggcta > 1:8422214‑M1/32‑35 (MQ=255) catatggtactggtgattctggatggctatggcta > 1:8285652‑M1/32‑35 (MQ=255) aCAAAATTCAGGAAGTAACCCATACCTTGAGCTaa < 1:17826414/35‑1 (MQ=255) cAAAATTCAGGAAGTAACCTATACCTTGAGCTaaa < 1:15894542/35‑1 (MQ=255) cAAAATTCAGGAAGTAACCCATACCTTGAGCTaaa < 1:5824758/35‑1 (MQ=255) cAAAATTCAGGAAGTAACCCATACCTTGAGCTaaa > 1:16843504/1‑35 (MQ=255) cAAAATTCAGGAAGTAACCCATACCTTGAGCTaaa < 1:10061904/35‑1 (MQ=255) atggtactggtgattctggatggctatgGCTaaaa < 1:14808048‑M1/7‑1 (MQ=255) atggtactggtgattctggatggctatgGCTaaaa < 1:6843407‑M1/7‑1 (MQ=255) atggtactggtgattctggatggctatgGCTaaaa < 1:11576618‑M1/7‑1 (MQ=255) aaaaTTCAGGAAGTAACCCATACCTTGAGCTaaaa > 1:6344859/1‑35 (MQ=255) aaaTTCAGGAAGTAACCCATACCTTGAGCTaaaaa < 1:1854257/35‑1 (MQ=255) aaaTTCAGGAAGTAACCCATACCTTGAGCTaaaaa < 1:6123107/35‑1 (MQ=255) aaaTTCAGGAAGTAACCCATACCTTGAGCTaaaaa > 1:13352991/1‑35 (MQ=255) aaTTCAGGAAGTAACCCATACCTTGAGCTAAAAAg < 1:18870114/35‑1 (MQ=255) aTTCAGGAAGTAACCCATACCTTGAGCTAAAAAgg < 1:13787909/35‑1 (MQ=255) ttCAGGAAGTAACCCATACCTTGAGCTAAAAAGga < 1:10803639/35‑1 (MQ=255) ttCAGGAAGTAACCCATACCTTGAGCTAAAAAGga > 1:3201696/1‑35 (MQ=255) tactggtgattctggatggctatgGCTAAAaagaa < 1:9252627‑M1/11‑3 (MQ=255) tactggtgattctggatggctatgGCTAAAaagaa < 1:18378934‑M1/11‑3 (MQ=255) tCAGGAAGTAACCCATACCTTGAGCTAAAAAGgag > 1:4745081/1‑35 (MQ=255) actggtgattctggatggctatgGCTAAAAAggaa < 1:10012098‑M1/12‑2 (MQ=255) actggtgattctggatggctatgGCTAAAAAGgag < 1:8732291‑M1/12‑1 (MQ=255) cAGTAAGTAACCCATACCTTGAGCTAAAAAGgaga > 1:14293559/1‑35 (MQ=255) cAGGAAGTAACCCATACCTTGAGCTAAAAAGgaga < 1:17649675/35‑1 (MQ=255) cAGGAAGTAACCCATACCTTGAGCTAAAAAGgaga > 1:17341384/1‑35 (MQ=255) cAGGAAGTAACCCATACCTTGAGCTAAAAAGgaga > 1:11449899/1‑35 (MQ=255) tggtgattctggatggctatgGCTAAAAAGGAGaa < 1:2803368‑M1/14‑1 (MQ=255) ggAAGTAACCCATACCTTGAGCTAAAAAGGAGAAg < 1:5813108/35‑1 (MQ=255) gAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGt < 1:4026743/35‑1 (MQ=255) gAAGTAACCCATACCTTGAGCTAAAAAGGA‑AAGTa < 1:3070367/35‑1 (MQ=255) aaGTAACCCATACCTTGAGCTAAAAAGGAGAAGTa > 1:10551048/1‑35 (MQ=255) aGTAACCCATACCTTGAGCTAAAAAGGAGAAGTaa < 1:9611168/35‑1 (MQ=255) aGTAACCCATACCTTGAGCTAAAAAGGAGAAGTaa < 1:1039723/35‑1 (MQ=255) aGTAACCCATACCTTGAGCTAAAAAGGAGAAGTaa < 1:10598061/35‑1 (MQ=255) gTAACCCATACCTTGAGCTAAAAAGGAGAAGTAAt < 1:16210397/35‑1 (MQ=255) tAACCCATACCTTGAGCTAAAAAGGAGAAGTAATg > 1:8498660/1‑35 (MQ=255) tAACCCATACCTTGAGCTAAAAAGGAGAAGTAATg > 1:13968219/1‑35 (MQ=255) aaCCCATACCTTGAGCTAAAAAGGAGAAGTAATgc < 1:8799995/35‑2 (MQ=255) aaCCCATACCTTGAGCTAAAAAGGAGAAGTAATGt > 1:9365649/1‑35 (MQ=255) aaCCCATACCTTGAGCTAAAAAGGAGAAGTAATGt < 1:18826126/35‑1 (MQ=255) aCCCATACCTTGAGCTAAAAAGGAGAAGTAATGTc < 1:19255893/35‑1 (MQ=255) aCCCATACCTTGAGCTAAAAAGGAGAAGTAATGTc < 1:15219575/35‑1 (MQ=255) cccATACCTTGAGCTAAAAAGGAGAAGTAATGTcg < 1:10220271/35‑1 (MQ=255) cccATACCTTGAGCTAAAAAGGAGAAGTAATGTcg < 1:19110788/35‑1 (MQ=255) cccATACCTTGAGCTAAAAAGGAGAAGTAATGTcg < 1:16914862/35‑1 (MQ=255) cccATACCTTGAGCTAAAAAGGAGAAGTAATGTcg > 1:5123618/1‑35 (MQ=255) cccATACCTTGAGCTAAAAAGGAGAAGTAATGTcg < 1:4917581/35‑1 (MQ=255) ccATACCTTGAGCTAAAAAGGAGAAGTAATGTggc < 1:18021292/35‑1 (MQ=255) ccATACCTTGAGCTAAAAAGGAGAAGTAATGTcgc > 1:17143006/1‑35 (MQ=255) ccATACCTTGAGCTAAAAAGGAGAAGTAATGTcgc > 1:5085165/1‑35 (MQ=255) ccATACCTTGAGCTAAAAAGGAGAAGTAATGTcgc < 1:12532050/35‑1 (MQ=255) ccATACCTTGAGCTAAAAAGGAGAAGTAATCTcgc > 1:6541031/1‑35 (MQ=255) cATACCTTGAGCTAAAAAGGAGAAGTAATGTcgcg < 1:1109189/35‑1 (MQ=255) cATACCTTGAGCTAAAAAGGAGAAGTAATGTcgcg < 1:19332295/35‑1 (MQ=255) aaTACCTTGAGCTAAAAAGGAGAAGTAATGTcgcg < 1:15733790/34‑1 (MQ=255) aTACCTTGAGCTAAAAAGGAGAAGTAATGTcgcgc < 1:7439702/35‑1 (MQ=255) aTACCTTGAGCTAAAAAGGAGAAGTAATGTcgcgc < 1:5174366/35‑1 (MQ=255) tACCTTGAGCTAAAAAGGAGAAGTAATGTcgcgcg > 1:1975477/1‑35 (MQ=255) tACCTTGAGCTAAAAAGGAGAAGTAATGTcgcgcg < 1:16514567/35‑1 (MQ=255) aCCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGt > 1:13017679/1‑35 (MQ=255) ccTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTc > 1:7229943/1‑35 (MQ=255) ccTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTc > 1:4470123/1‑35 (MQ=255) cTTGAGCTAAAAAGGAGAAGTAATGTCTCGCGTCa > 1:3840618/1‑35 (MQ=255) cTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCa < 1:7516546/35‑1 (MQ=255) cTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCa < 1:6963767/35‑1 (MQ=255) cTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCa < 1:10856543/35‑1 (MQ=255) ttGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCaa < 1:13296533/35‑1 (MQ=255) ttGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCaa < 1:2641137/35‑1 (MQ=255) tGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAAt > 1:244998/1‑35 (MQ=255) gAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATc < 1:7431186/35‑1 (MQ=255) gAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATc < 1:3719657/35‑1 (MQ=255) gAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATc < 1:16666710/35‑1 (MQ=255) aGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATcc > 1:524744/1‑35 (MQ=255) aGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATcc < 1:18668176/35‑1 (MQ=255) aGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATcc < 1:8970379/35‑1 (MQ=255) GCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCct > 1:3547082‑M1/1‑35 (MQ=255) GCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCct < 1:2354122‑M1/35‑1 (MQ=255) | GGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCT > REL606/365467‑365535 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |