Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,015,771 | IS150 (–) +3 bp | 97.6% | coding (1192‑1194/1677 nt) | ECB_02816 → | KpsD protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2775877 | NA (NA) | 109 (1.160) | 37/44 | NT | 97.9% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 3015771 = | 2 (0.020) | coding (1192/1677 nt) | ECB_02816 | KpsD protein | |||||
* | ? | REL606 | = 3015773 | 3 (0.040) | 97 (0.980) | 40/46 | NT | 96.6% | coding (1194/1677 nt) | ECB_02816 | KpsD protein |
? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 140 total aligned reads displayed.
ATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCA > REL606/2775846‑2775911 | aTTTCATCGTCCAACAAAATGGGTGCAGTACAGGt > 1:11391668/1‑35 (MQ=35) aTTTCATCGTCCAACAAAATGGGTGCAGTACAGGt > 1:19790586/1‑35 (MQ=35) aTTTCATCGTCCAACAAAATGGGTGCAGTACAGGt > 1:12509750/1‑35 (MQ=35) tttCATCGTCCAACAAAATGGGTGCAGTACAGGtt > 1:8945493/1‑35 (MQ=38) tttCATCGTCCAACAAAATGGGTGCAGTACAGGtt > 1:732183/1‑35 (MQ=38) tttCATCGTCCAACAAAATGGGTGCAGTACAGGtt < 1:6367704/35‑1 (MQ=38) ttCATCGTCCAACAAAATGGGTGCAGTACAGGTTg < 1:4188680/35‑1 (MQ=40) ttCATCGTCCAACAAAATGGGTGCAGTACAGGTTg > 1:20003993/1‑35 (MQ=40) ttCATCGTCCAACAAAATGGGTGCAGTACAGGTTg < 1:18994380/35‑1 (MQ=40) tCATCGTCCAACAAAATGGGTGCAGTACAGGTTGa > 1:11602415/1‑35 (MQ=255) cATCGTCCAACAAAATGGTTGCAGTACATGTTGAt > 1:15931975/1‑35 (MQ=14) cATCGTCCAACAAAATGGGTGCAGTACAGGTTGAt < 1:9567473/35‑1 (MQ=255) cATCGTCCAACAAAATGGGTGCAGTACAGGTTGAt < 1:20347770/35‑1 (MQ=255) cATCGTCCAACAAAATGGGTGCAGTACAGGTTGAt < 1:17924716/35‑1 (MQ=255) cATCGTCCAACAAAATGGGTGCAGTACAGGTTGAt > 1:13038637/1‑35 (MQ=255) tCGTCCAACAAAATGGGTGCAGTACAGGTTGATAg < 1:2565498/35‑1 (MQ=255) tCGTCCAACAAAATGGGTGCAGTACAGGTTGATAg < 1:4136594/35‑1 (MQ=255) cGTCCAACAAAATGGGTGCAGTACAGGTTGATAGa < 1:6626832/35‑1 (MQ=255) gTCCAACAAAATGGGTGCAGTACAGGTTGATAGaa < 1:551015/35‑1 (MQ=255) gTCCAACAAAATGGGTGCAGTACAGGTTGATAGaa < 1:19394883/35‑1 (MQ=255) tCCAACAAAATGGGTGCAGTACAGGTTGATAGaaa < 1:13390095/35‑1 (MQ=255) tCCAACAAAATGGGTGCAGTACAGGTTGATAGaaa > 1:15079742/1‑35 (MQ=255) ccAACAAAATGGGTGCAGTACAGGTTGATAGAAat > 1:10022408/1‑35 (MQ=255) caacaaAATGGGTGCAGTACAGGTTGATAGAAata < 1:7877101/35‑1 (MQ=255) caacaaAATGGGTGCAGTACAGGTTGATAGAAata > 1:18267736/1‑35 (MQ=255) caacaaAATGGGTGCAGTACAGGTTGATAGAAata > 1:10114472/1‑35 (MQ=255) caacaaAATGGGTGCAGTACAGGTTGATAGAAata < 1:5468672/35‑1 (MQ=255) caacaaAATGGGTGCAGTACA‑GTTGATAGAAatat > 1:3149072/1‑35 (MQ=18) aacaaAATGGGTGCAGTACAGGTTGATAGAAatat < 1:13354518/35‑1 (MQ=255) aacaaAATGGGTGCAGTACAGGTTGATAGAAatat > 1:12069055/1‑35 (MQ=255) aacaaAATGGGTGCAGTACA‑GTTGATAGAAATATc > 1:8843925/1‑35 (MQ=18) acaaAATGGGTGCAGTACAGGTTGATAGAAatatg < 1:11148114/35‑2 (MQ=255) acaaAATGGGTGCAGTACAGGTTGATAGAAATATc > 1:1926304/1‑35 (MQ=255) acaaAATGGGTGCAGTACAGGTTGATAGAAATATc > 1:11577841/1‑35 (MQ=255) acaaAATGGGTGCAGTACAGGTTGATAGAAATATc < 1:16138628/35‑1 (MQ=255) acaaAATGGGTGCAGTACAGGTTGATAGAAATATc > 1:15404812/1‑35 (MQ=255) acaaAATGGGTGCAGTACAGGTTGATAGAAATATc < 1:4765661/35‑1 (MQ=255) acaaAATGGGTGCAGTACAGGTTGATAGAAATATc < 1:2306376/35‑1 (MQ=255) caaAATGGGTGCAGTACAGGTTGATAGAAATATCg < 1:50327/35‑1 (MQ=255) caaAATGGGTGCAGTACAGGTTGATAGAAATATCg > 1:19529140/1‑35 (MQ=255) caaAATGGGTGCAGTACAGGTTGATAGAAATATCg > 1:5659222/1‑35 (MQ=255) caaAATGGGTGCAGTACAGGTTGATAGAAATATCg < 1:10311281/35‑1 (MQ=255) caaAATGGGTGCAGTACAGGTTGATAGAAATATCg < 1:7030259/35‑1 (MQ=255) caaAATGGGTGCAGTACAGGTTGATAGAAATATCg < 1:1582698/35‑1 (MQ=255) aaaaTGGGTGCAGTACAGGTTGATAGAAATATCGc > 1:13242009/1‑35 (MQ=255) aaaaTGGGTGCAGTACAGGTTGATAGAAATATCGc < 1:2110093/35‑1 (MQ=255) aaaTGGGTGCAGTACAGGTTGATAGAAATATCGcc < 1:1745035/35‑1 (MQ=255) aaaTGGGTGCAGTACAGGTTGATAGAAATATCGcc > 1:8659815/1‑35 (MQ=255) aaTGGGTGCAGTACAGGTTGATAGAAATATCGCCt < 1:2945271/35‑1 (MQ=255) aaTGGGTGCAGTACAGGTTGATAGAAATATCGCCt < 1:14923920/35‑1 (MQ=255) aaTGGGTGCAGTACAGGTTGATAGAAATATCGCCt < 1:7129263/35‑1 (MQ=255) aaTGGGTGCAGTACAGGTTGATAGAAATATCGCCt > 1:19598407/1‑35 (MQ=255) aaTGGGCGCAGTACAGGTTGATAGAAATATCGCCt > 1:14823600/1‑35 (MQ=255) aTGGGTGCAGTACAGGTTTATAGAAATATCGCCTg > 1:300127/1‑35 (MQ=255) aTGGGTGCAGTACAGGTTTATAGAAATATCGCCTg > 1:12613110/1‑35 (MQ=255) aTGGGTGCAGTACAGGTTGATAGAAATATCGCCTg < 1:319694/35‑1 (MQ=255) gggTGCAGTACTGGTTGATAGAAATATCGCCTggg < 1:19328265/35‑1 (MQ=255) ggTGCAGTACAGGTTGATAGAAATATCGCCTgggg < 1:371806/35‑1 (MQ=255) ggTGCAGTACAGGTTGATAGAAATATCGCCTgggg > 1:20459506/1‑35 (MQ=255) gTGCAGTACAGGTTGATAGAAATATCGCCTGGGGc < 1:3549960/35‑1 (MQ=255) gTGCAGTACAGGTTGATAGAAATATCGCCTGGGGc < 1:6110358/35‑1 (MQ=255) gTGCAGTACAGGTTGATAGAAATATCGCCTGGGGc < 1:5627953/35‑1 (MQ=255) gTGCAGTACAGGTTGATAGAAATATCGCCTGGGGc > 1:12747215/1‑35 (MQ=255) gTGCAGTACAGGTTGATAGAAATATCGCCTGGGGc > 1:20013810/1‑35 (MQ=255) gTGCAGTAAAGGTTGATAGAAATATCGCCTGGGGc < 1:7787031/35‑1 (MQ=255) tGCAGTACAGGTTGATAGAAATATCGCCTGGGGCt < 1:11722240/35‑1 (MQ=255) tGCAGTACAGGTTGATAGAAATATCGCCTGGGGCt > 1:5290955/1‑35 (MQ=255) tGCAGTACAGGTTGATAGAAATATCGCCTGGGGCt > 1:4502623/1‑35 (MQ=255) gaaGTACAGGTTGATAGAAATATCGCCTGGGGCtt < 1:3553891/33‑1 (MQ=255) gCAGTACAGGTTGATAGAAATATCGCCTGGGGCtt < 1:8540646/35‑1 (MQ=255) gCAGTACAGGTTGATAGAAATATCGCCTGGGGCtt > 1:14924263/1‑35 (MQ=255) gCAGTACAGGTTGATAGAAATATCGCCTGGGGCtt < 1:7132933/35‑1 (MQ=255) gCAGTACAGGTTGATAGAAATATCGCCTGGGGCtt < 1:8602717/35‑1 (MQ=255) cAGTACAGGTTGATAGAAATATCGCCTGGGGCttt > 1:16996117/1‑35 (MQ=255) aGTACAGGTTGATAGAAATATCGCCTGGGGCtttt < 1:15129426/35‑1 (MQ=255) aGTACAGGTTGATAGAAATATCGCCTGGGGCtttt > 1:8512084/1‑35 (MQ=255) aGTACAGGTTGATAGAAATATCGCCTGGGGCtttt < 1:3294711/35‑1 (MQ=255) aGTACAGGTTGATAGAAATATCGCCTGGGGCtttt < 1:18735536/35‑1 (MQ=255) gTACAGGTTGATAGAAATATCGCCTGGGGCttttt > 1:272361/1‑34 (MQ=255) gTACAGGTTGATAGAAATATCGCCTGGGGCTTTTg < 1:17624847/35‑1 (MQ=255) gTACAGGTTGATAGAAATATCGCCTGGGGCTTTTg > 1:1989602/1‑35 (MQ=255) gTACAGGTTGATAGAAATATCGCCTGGGGCTTTTg > 1:10706471/1‑35 (MQ=255) gTACAGGTTGATAGAAATATCGCCTGGGGCTTTTg < 1:10372027/35‑1 (MQ=255) gTACAGGTTGATAGAAATATCGCCTGGGGCTTTTg > 1:3578597/1‑35 (MQ=255) gTACAGGTTGATAGAAATATCGCCTGGGGCTTTTg < 1:10054587/35‑1 (MQ=255) tACAGGTTGATAGAAATATCGCCTGGGGCTTTTGt < 1:17322751/35‑1 (MQ=255) tACAGGTTGATAGAAATATCGCCTGGGGCTTTTGt > 1:12038225/1‑35 (MQ=255) tACAGGTTGATAGAAATATCGCCTGGGGCTTTTGt > 1:19801643/1‑35 (MQ=255) tACAGGTTGATAGAAATATCGCCTGGGGCTTTTGt > 1:3168078/1‑35 (MQ=255) aCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTc > 1:8425094/1‑35 (MQ=255) aCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTc < 1:5748002/35‑1 (MQ=255) aCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTc < 1:20481643/35‑1 (MQ=255) aCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTc < 1:3315882/35‑1 (MQ=255) aCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTc < 1:9504400/35‑1 (MQ=255) cAGGTTGATAGAAATATCGCCTGGGGCTTTTGTcc < 1:18705018/35‑1 (MQ=255) cAGGTTGATAGAAATATCGCCTGGGGCTTTTGTcc > 1:8632347/1‑35 (MQ=255) cAGGTTGATAGAAATATCGCCTGGGGCTTTTGTcc > 1:20583101/1‑35 (MQ=255) cAGGTTGATAGAAATATCGCCTGGGGCTTTTGTcc > 1:3482168/1‑35 (MQ=255) aGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCa < 1:1858115/35‑1 (MQ=255) aGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCa > 1:15566924/1‑35 (MQ=255) | ATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCA > REL606/2775846‑2775911 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |