New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 449635 = | 24 (0.230) | 5 (0.070) | 3/34 | NT | 11.1% | coding (1050/1551 nt) | ylaB | conserved inner membrane protein |
? | REL606 | = 3144237 | 63 (0.870) | coding (314/1746 nt) | dnaG | DNA primase |
Only 100 of 108 total aligned reads displayed.
GATTGATCGAAATATGCTGCTGTGGATGCTGACGCAGCCAGTCGCCCATATCTTCAAAGACGCTTCTTA > REL606/449601‑449669 | gATTGATCGAAATATGCTGCTGTGGATTCTGACGc > 1:1692910/1‑35 (MQ=255) gATTGATCGAAATATGCTGCTGTGGATGCTGACGc < 1:9120469/35‑1 (MQ=255) tcttgaagtgccatttgaagcaggcagcggcccca > 1:18721836‑M1/34‑35 (MQ=255) tcttgaagtgccatttgaagcaggcagcggcccca > 1:11458835‑M1/34‑35 (MQ=255) tattgaagtgccatttgaagcaggcagcggcccca > 1:19549700‑M1/34‑35 (MQ=255) aTTGATCGAAATATGCTTCTGTGGATGGTGGCGCa > 1:15225404/1‑35 (MQ=25) aTTGATCGAAATATGCTGCTGTGGATGTTGACGCa < 1:6027606/35‑1 (MQ=255) aTTGATCGAAATATGCTGCTGTGGATGGGGACGCa > 1:17542933/1‑35 (MQ=37) aTTGATCGAAATATGCTGCTGTGGATGCTGACGCa < 1:2011225/35‑1 (MQ=255) aTTGATCGAAATATGCTGCTGTGGATGCTGACGCa < 1:384896/35‑1 (MQ=255) aTTGATCGAAATATGCTGCTGTGGATGCTGACGCa < 1:11053160/35‑1 (MQ=255) aTTGATCGAAATATGCTGCTGTGGATGCTGACGCa < 1:6018089/35‑1 (MQ=255) aTTGATCGAAATATGCTGCTGTGGATGCTGACGCa < 1:11305985/35‑1 (MQ=255) aTTGATCGAAATATGCTGCTGTGGATGCTGACGCa < 1:3999243/35‑1 (MQ=255) aTTGATCGAAATATGCTGCTGTGGATGCTGACGCa < 1:19506306/35‑1 (MQ=255) ttGATCGAAATATGCTGCTGTGGATGCTGGCGGAg > 1:120583/1‑35 (MQ=37) ttGATCGAAATATGCTGCTGTGGATGCTGACGCAg < 1:12299189/35‑1 (MQ=255) ttGATCGAAATATGCTGCTGTGGATGCTGACGCAg < 1:6290146/35‑1 (MQ=255) ttGATCGAAATATGCTGCTGTGGATGCTGACGCAg < 1:9308568/35‑1 (MQ=255) cttgaagtgccatttgaagcaggcagcggccccag > 1:6046492‑M1/33‑35 (MQ=255) cttgaagtgccatttgaagcaggcagcggccccag < 1:13429530‑M1/3‑1 (MQ=255) ttgaagtgccatttgaagcaggcagcggcccccgc < 1:16100794‑M1/4‑4 (MQ=255) ttgaagtgccatttgaagcaggcagcggccccagc > 1:20518156‑M1/32‑35 (MQ=255) tGATCGAAATATGCTGCTGTGGATGCTGACGCAGc < 1:13987285/35‑1 (MQ=255) gATCGAAATATGCTGCTGTGGATGCTGACGCCGcc > 1:6024765/1‑35 (MQ=255) gATCGAAATATGCTGCTGTGGATGCTGACGCAGcc < 1:15969713/35‑1 (MQ=255) gATCGAAATATGCTGCTGTGGATGCTGACGCAGcc < 1:11283820/35‑1 (MQ=255) gATCGAAATATGCTGCTGTGGATGCTGACGCAGcc > 1:5842544/1‑35 (MQ=255) gaagtgccatttgaagcaggcagcggccccagcca < 1:2639158‑M1/6‑1 (MQ=255) gaagtgccatttgaagcaggcagcggccccagcca < 1:8017071‑M1/6‑1 (MQ=255) aTCGAAATATGCTGCTGTGGATGGTGGGGCAGGCa > 1:11378341/1‑35 (MQ=19) aagtgccatttgaagcaggcagcggccccagccag > 1:14692364‑M1/29‑35 (MQ=255) aagtgccatttgaagcaggcagcggccccagccag < 1:11627382‑M1/7‑1 (MQ=255) aagtgccatttgaagcaggcagcggccccagccag < 1:7795776‑M1/7‑1 (MQ=255) aagtgccatttgaagcaggcagcggccccagccag < 1:8251241‑M1/7‑1 (MQ=255) gAAATATGCTGCTGTGGATGCTGACGCAGCAAGTc < 1:5525947/35‑1 (MQ=255) aaaTATGCTGCTGTGGATTCTGACGCAGCCAGTCg > 1:14914414/1‑35 (MQ=255) atGCTGCTGTGGATGCTGACGCAGCCCGGCGcccc > 1:17662053/1‑34 (MQ=25) ctgctgGGGGTGGTGCCCCAGCCAGTCGCCCatat < 1:8582850/35‑1 (MQ=12) gtgGGTGCCGCCCCAGCCAGTCGCCCATATCTTCa < 1:3652644/35‑1 (MQ=16) gtgGATCCTCCCCCAGCCAGTCGCCCATATCTTCa < 1:11902654/35‑1 (MQ=16) tgGATGCTGCCCCAGCCAGTCGCCCATATCTTCaa < 1:9623421/35‑1 (MQ=25) tgGATGCTGACGCAGCCAGTCGCCCATATCTTCaa > 1:5309816/1‑35 (MQ=255) tgGATGCTGACGCAGCCAGTCGCCCATATCTTCaa > 1:140975/1‑35 (MQ=255) tgGATGCGGCCCCAGCCAGTCGCCCATATCTTCaa < 1:4727579/35‑1 (MQ=21) ggccgcggcccCAGCCAGTCGCCCATATCTTCaaa > 1:6606941‑M1/12‑35 (MQ=255) gATGCTGACGCAGCCAGTCGCCCATATCTTCAAAg > 1:5918645/1‑35 (MQ=255) gATGCTGACGCAGCCAGTCGCCCATATCTTCAAAg > 1:10118464/1‑35 (MQ=255) gATGCTGACGCAGCCAGTCGCCCATATCTTCAAAg > 1:15369599/1‑35 (MQ=255) gATGCTGACGCAGCCAGTCGCCCATATCTTCAAAg > 1:10976827/1‑35 (MQ=255) ttGCTGCCCCAGCCAGTCGCCCATATCTTCAAAGa < 1:4185150/34‑1 (MQ=25) aTGCTGACGCAGCCAGTCGCCCATATCTTCAAAGa > 1:18059318/1‑35 (MQ=255) aTGCTGACGCAGCCAGTCGCCCATATCTTCAAAGa > 1:17247140/1‑35 (MQ=255) ggcggcccCAGCCAGTCGCCCATATCTTCAAAGAc > 1:13004132‑M1/9‑35 (MQ=255) gcggcccCAGCCAGTCGCCCATATCTTCAAAGACg > 1:6691224‑M1/8‑35 (MQ=255) gCTGACGCAGCCAGTCGCCCATATCTTCAAAGACg > 1:19708804/1‑35 (MQ=255) ccgccccCAGCCAGTCGCCCATATCTTCAAAGACg > 1:162656‑M1/8‑35 (MQ=255) cTGACGCAGCCAGTCGCCCATATCTTCAAAGACGc > 1:11345227/1‑35 (MQ=255) cTGACGCAGCCAGTCGCCCATATCTTCAAAGACGc > 1:887045/1‑35 (MQ=255) cTGACGCAGCCAGTCGCCCATATCTTCAAAGACGc > 1:17635363/1‑35 (MQ=255) cTGACGCAGCCAGTCGCCCATATCTTCAAAGACGc > 1:15515220/1‑35 (MQ=255) cTGACGCAGCCAGTCGCCCATATCTTCAAAGACGc > 1:1653236/1‑35 (MQ=255) tGACGCAGCCAGTCGCCCATATCTTCAAAGACGct > 1:9142202/1‑35 (MQ=255) tGACGCAGCCAGTCGCCCATATCTTCAAAGACGct > 1:5165486/1‑35 (MQ=255) tGACGCAGCCAGTCGCCCATATCTTCAAAGACGct > 1:10511929/1‑35 (MQ=255) tGACGCAGCCAGTCGCCCATATCTTCAAAGACGct > 1:3878853/1‑35 (MQ=255) gccccCAGCCAGTCGCCCATATCTTCAAAGACGct > 1:17817003‑M1/6‑35 (MQ=255) cccccCAGCCAGTCGCCCATATCTTCAAAGACGct > 1:17247670‑M1/6‑35 (MQ=255) gcccCAGCCAGTCGCCCATATCTTCAAAGACGctt > 1:4056725‑M1/5‑35 (MQ=255) gcccCAGCCAGTCGCCCATATCTTCAAAGACGctt > 1:11147058‑M1/5‑35 (MQ=255) gcccCAGCCAGTCGCCCATATCTTCAAAGACGctt > 1:17324112‑M1/5‑35 (MQ=255) gACGCAGCCAGTCGCCCATATCTTCAAAGACGctt > 1:10589440/1‑35 (MQ=255) gACGCAGCCAGTCGCCCATATCTTCAAAGACGctt > 1:19325929/1‑35 (MQ=255) gACGCAGCCAGTCGCCCATATCTTCAAAGACGctt > 1:2795420/1‑35 (MQ=255) gACGCAGCCAGTCGCCCATATCTTCAAAGACGctt > 1:15430793/1‑35 (MQ=255) ccccCAGCCAGTCGCCCATATCTTCAAAGACGctt > 1:16133215‑M1/5‑35 (MQ=255) cccCAGCCAGTCGCCCATATCTTCAAAGACGcttc > 1:2607843‑M1/4‑35 (MQ=255) aCGCAGCCAGTCGCCCATATCTTCAAAGACGcttc > 1:13384912/1‑35 (MQ=255) aCGCAGCCAGTCGCCCATATCTTCAAAGACGcttc > 1:312499/1‑35 (MQ=255) ccCAGCCAGTCGCCCATATCTTCAAAGACGcttct > 1:9396718‑M1/3‑35 (MQ=255) ccCAGCCAGTCGCCCATATCTTCAAAGACGcttct > 1:15629727‑M1/3‑35 (MQ=255) ccCAGCCAGTCGCCCATATCTTCAAAGACGcttct > 1:6633266‑M1/3‑35 (MQ=255) ccCAGCCAGTCGCCCATATCTTCAAAGACGcttct > 1:11045371‑M1/3‑35 (MQ=255) gCAGCCAGTCGCCCATATCTTCAAAGACGcttctt > 1:15524089/1‑35 (MQ=255) gCAGCCAGTCGCCCATATCTTCAAAGACGcttctt > 1:18545802/1‑35 (MQ=255) gCAGCCAGTCGCCCATATCTTCAAAGACGcttctt < 1:19482697/35‑1 (MQ=255) cCAGCCAGTCGCCCATATCTTCAAAGACGcttctt > 1:16607884‑M1/2‑35 (MQ=255) cCAGCCAGTCGCCCATATCTTCAAAGACGcttctt > 1:14590627‑M1/2‑35 (MQ=255) cCAGCCAGTCGCCCATATCTTCAAAGACGcttctt > 1:1978645‑M1/2‑35 (MQ=255) cCAGCCAGTCGCCCATATCTTCAAAGACGcttctt > 1:4635681‑M1/2‑35 (MQ=255) cCAGCCAGTCGCCCATATCTTCAAAGACGcttctt > 1:461702‑M1/2‑35 (MQ=255) CAGCCAGTCGCCCATATCTTCAAAGACGCTTCTta < 1:3216180‑M1/35‑1 (MQ=255) CAGCCAGTCGCCCATATCTTCAAAGACGCTTCTta > 1:18209632‑M1/1‑35 (MQ=255) CAGCCAGTCGCCCATATCTTCAAAGACGCTTCTta < 1:1567025‑M1/35‑1 (MQ=255) CAGCCAGTCGCCCATATCTTCAAAGACGCTTCTta > 1:84942‑M1/1‑35 (MQ=255) CAGCCAGTCGCCCATATCTTCAAAGACGCTTCTta < 1:8072926‑M1/35‑1 (MQ=255) CAGCCAGTCGCCCATATCTTCAAAGACGCTTCTta > 1:3027859‑M1/1‑35 (MQ=255) CAGCCAGTCGCCCATATCTTCAAAGACGCTTCTta > 1:13141474‑M1/1‑35 (MQ=255) CAGCCAGTCGCCCATATCTTCAAAGACGCTTCTta < 1:13734428‑M1/35‑1 (MQ=255) CAGCCAGTCGCCCATATCTTCAAAGACGCTTCTta < 1:15068927‑M1/35‑1 (MQ=255) | GATTGATCGAAATATGCTGCTGTGGATGCTGACGCAGCCAGTCGCCCATATCTTCAAAGACGCTTCTTA > REL606/449601‑449669 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |