New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2671676 = | 67 (0.650) | 9 (0.120) | 3/36 | NT | 13.7% | coding (328/594 nt) | grpE | heat shock protein |
? | REL606 | 4487631 = | 63 (0.820) | coding (453/1119 nt) | yjhC | predicted oxidoreductase |
Only 100 of 150 total aligned reads displayed.
TCAACCATCGCAGACATATCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATC > REL606/2671642‑2671710 | tCACCCATCGCAGACATATCCGGGTTAGCTTTATc < 1:13594986/35‑1 (MQ=255) tCACCCATCGCAGACATATCCGGGTTAGCTTTATc < 1:4868880/35‑1 (MQ=255) tCAACCATCGCAGACATATCCGGGTTAGCTTTATc > 1:7417563/1‑35 (MQ=255) tCAACCATCGCAGACATATCCGGGTTAGCTTTATc < 1:17155165/35‑1 (MQ=255) ctttttccaggaaagtctctcttgtttgttttccc > 1:5482224‑M1/35‑35 (MQ=255) ctttttccaggaaagtctctcttgtttgttttccc < 1:9630076‑M1/1‑1 (MQ=255) ctttttccaggaaagtctctcttgtttgttttccc > 1:18924994‑M1/35‑35 (MQ=255) tttttccaggaaagtctctcttgtttgttttccCa < 1:9017312‑M1/2‑1 (MQ=255) tttttccaggaaagtctctcttgtttgttttccCa < 1:12354146‑M1/2‑1 (MQ=255) tttttccaggaaagtctctcttgtttgttttccCa > 1:8286238‑M1/34‑35 (MQ=255) tttttccaggaaagtctctcttgtttgttttccCa > 1:6813643‑M1/34‑35 (MQ=255) cacccATCGCAGACATATCCGGGTTAGCTTTATCa < 1:17556684/32‑1 (MQ=255) cAACCATCGCAGACATATCCGGGTTAGCTTTATCa > 1:6007479/1‑35 (MQ=255) aacccATCGCAGACATATCCGGGTTAGCTTTATCa < 1:6022391/32‑1 (MQ=255) ttttccaggaaagtctctcttgtttgttttccCAg > 1:8097009‑M1/33‑35 (MQ=255) ttttccaggaaagtctctcttgtttgttttccCAg < 1:817492‑M1/3‑1 (MQ=255) aaCCATCGCAGACATATCCGGGTTAGCTTTATCAg > 1:12450684/1‑35 (MQ=255) tttccaggaaagtctctcttgtttgttttccCAGc > 1:2486165‑M1/32‑35 (MQ=255) tttccaggaaagtctctcttgtttgttttccCAGc > 1:380091‑M1/32‑35 (MQ=255) cccATCGCAGACATATCCGGGTTAGCTTTATCAGc < 1:683776/34‑1 (MQ=255) cccATCCCAGACATATCCGGGTTAGCTTTATCAGc < 1:11927054/34‑1 (MQ=255) aCCATCGCGGACATATCCGGGTTAGCTTTATCAGc > 1:974256/1‑35 (MQ=255) aCCATCGCAGACATATCCGGGTTAGCTTTATCAGc > 1:20178165/1‑35 (MQ=255) aCCATCGCAGACATATCCGGGTTAGCTTTATCAGc > 1:1424633/1‑35 (MQ=255) aCCATCGCAGACATATCCGGGTTAGCTTTATCAGc > 1:8689268/1‑35 (MQ=255) ttccaggaaattctctcttgtttgttttccCAGcc < 1:16247391‑M1/5‑1 (MQ=255) ttccaggaaagtctctcttgtttgttttccCAGcc < 1:20089557‑M1/5‑1 (MQ=255) ttccaggaaagtctctcttgtttgttttccCAGcc > 1:8432220‑M1/31‑35 (MQ=255) ttccaggaaagtctctcttgtttgttttccCAGcc > 1:12096305‑M1/31‑35 (MQ=255) ccATCGCAGACATATCCGGGTTAGCTTTATCAGcc > 1:11658442/1‑35 (MQ=255) ccATCGCAGACATATCAGGGTTAGCTTTATCAGcc < 1:11879509/35‑1 (MQ=255) tccaggaaagtctctcttgtttgttttccCAGCCa > 1:18165997‑M1/30‑35 (MQ=255) tccaggaaagtctctcttgtttgttttccCAGCCa < 1:25306‑M1/6‑1 (MQ=255) tccaggaaagtctctcttgtttgttttccCAGCCa < 1:11680106‑M1/6‑1 (MQ=255) cATCGCAGACATATCCGGGTTAGCTTTATCAGCCa > 1:2814584/1‑35 (MQ=255) aTCGCAGACATATCCGGGTTATCTTTATCAGCCAc > 1:9198096/1‑35 (MQ=255) aTCGCAGACATATCCGGGTTAGCTTTATCAGCCAc > 1:15178371/1‑35 (MQ=255) aTCGCAGACATATCCGGGTTAGCTTTATCAGCCAc > 1:10138465/1‑35 (MQ=255) aTCGCAGACATATCCGGGTTAGCTTTATCAGCCAc > 1:19121941/1‑35 (MQ=255) tCGCAGACATATCCGGGTTAGCTTTATCAGCCACt > 1:1324238/1‑35 (MQ=255) cccAGACATATCCGGGTTAGCTTTATCAGCCACtt < 1:2345574/33‑1 (MQ=255) gCAGACATATCCGGGTTAGCTTTATCAGCCACTTc > 1:18854768/1‑35 (MQ=255) cAGACATATCCGGGTTAGCTTTATCAGCCACTTcc > 1:8665119/1‑35 (MQ=255) aGACATATCCGGGTTAGCTTTATCAGCCACTTCCa > 1:9729979/1‑35 (MQ=255) gACATATCCGGGTTAGCTTTATCAGCCACTTCCAg > 1:651578/1‑35 (MQ=255) gACATATCCGGGTTAGCTTTATCAGCCACTTCCAg > 1:19498617/1‑35 (MQ=255) gACATATCCGGGTTAGCTTTATCAGCCACTTCCAg > 1:10077850/1‑35 (MQ=255) gACATATCCGGGTTAGCTTTATCAGCCACTTCCAg > 1:13186746/1‑35 (MQ=255) gACATATCCGGGTTAGCTTTATCAGCCACTTCCAg > 1:19119745/1‑35 (MQ=255) aaCATATCCGGGTTAGCTTTATCAGCCACTTCCAg > 1:1634692/2‑35 (MQ=255) aCATATCCGGGTTAGCTTTATCAGCCACTTCCAgc > 1:5957711/1‑35 (MQ=255) aCATATCCGGGTTAGCTTTATCAGCCACTTCCAgc > 1:14782057/1‑35 (MQ=255) aCATATCCGGGTTAGCTTTATCAGCCACTTCCAgc > 1:18035748/1‑35 (MQ=255) cATATCCGGGTTAGCTTTATCAGCCACTTCCAgcg > 1:442146/1‑35 (MQ=255) atatCCGGGTTAGCTTTATCAGCCACTTCCAgcgc > 1:3178211/1‑35 (MQ=255) atatCCGGGTTAGCTTTATCAGCCACTTCCAgcgc > 1:3792530/1‑35 (MQ=255) tatCCGGGTTAGCTTTATCAGCCACTTCCAGCGCa > 1:15780691/1‑35 (MQ=255) atCCGGGTTAGCTTTATCAGCCACTTCCAGCGCAc > 1:6892040/1‑35 (MQ=255) tCCGTGTTAGCTTTATCAGCCACTTCCAGCGCACg > 1:8173391/1‑35 (MQ=255) tCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACg > 1:495880/1‑35 (MQ=255) cggggTTATTTTTCCCAGCCACTTCCAGCGCACgg < 1:20518036/33‑2 (MQ=9) cGGGTTAGCTTTATCAGCCACTTCCAGCGCACGAt > 1:8342856/1‑35 (MQ=255) cGGGTTAGCTTTATCAGCCACTTCCAGCGCACGAt > 1:14151060/1‑35 (MQ=255) ggtttAGCTTTATCAGCCACTTCCAGCGCACGATc > 1:2071274/4‑35 (MQ=255) gggTTAGCTTTATCAGCCACTTCCAGCGCACGATc > 1:17865681/1‑35 (MQ=255) gttttgttttccCAGCCACTTCCAGCGCACGATcc > 1:4401152‑M1/13‑35 (MQ=255) ggTTAGCTTTATCAGCCACTTCCAGCGCACGATcc > 1:6036423/1‑35 (MQ=255) ggTTAGCTTTATCAGCCACTTCCAGCGCACGATcc > 1:18595652/1‑35 (MQ=255) ggTTAGCTTTATCAGCCACTTCCAGCGCACGATcc > 1:16423182/1‑35 (MQ=255) tttATCTTTCCCAGCCACTTCCAGCGCACGATCCa < 1:10433004/34‑1 (MQ=21) tttAGTTTTACCAGCCACTTACAGCGCACGATCCa < 1:6992829/34‑1 (MQ=25) ttAGCTTTATCAGCCACTTCCAGCGCACGATCCAg > 1:8371054/1‑35 (MQ=255) ttAGCTTTATCAGCCACTTCCAGCGCACGATCCAg > 1:16078131/1‑35 (MQ=255) tgtttttccCAGCCACTTCCAGCGCACGATCCAgg > 1:7584250‑M1/10‑35 (MQ=255) tAGCTTTATCAGCCACTTCCAGCGCACGATCCAgg > 1:11269768/1‑35 (MQ=255) tAGCTTTATCAGCCACTTCCAGCGCACGATCCAgg > 1:12997749/1‑35 (MQ=255) gatttttccCAGCCACTTCCAGCGCACGATCCAgg > 1:5657704‑M1/10‑35 (MQ=255) gcttttccCAGCCACTTCCAGCGCACGATCCAGGc > 1:4092945‑M1/9‑35 (MQ=255) aGCTTTATCAGCCACTTCCAGCGCACGATCCAGGc > 1:223299/1‑35 (MQ=255) ttttcccCAGCCACTTCCAGCGCACGATCCAGGCt > 1:402973‑M1/8‑35 (MQ=255) ttttcccCAGCCACTTCCAGCGCACGATCCAGGCt > 1:3222987‑M1/8‑35 (MQ=255) gCTTTATCAGCCACTTCCAGCGCACGATCCAGGCt > 1:10811627/1‑35 (MQ=255) gCTTTATCAGCCACTTCCAGCGCACGATCCAGGCt > 1:575500/1‑35 (MQ=255) ttttccCAGCCACTTCCAGCGCACGATCCAGGCTa > 1:291729‑M1/7‑35 (MQ=255) tttATCAGCCACTTCCAGCGCACGATCCAGGCTat > 1:10441684/1‑35 (MQ=255) tttATCAGCCACTTCCAGCGCACGATCCAGGCTat > 1:15946271/1‑35 (MQ=255) tttcCAGCCACTTCCAGCGCACGATCCAGGCTatc > 1:6839753‑M1/5‑35 (MQ=255) ttATCAGCCACTTCCAGCGCACGATCCAGGCTatc > 1:11578738/1‑35 (MQ=255) tcccCAGCCACTTCCAGCGCACGATCCAGGCTatc > 1:17651722‑M1/5‑35 (MQ=255) tccCAGCCACTTCCAGCGCACGATCCAGGCTatca > 1:12690684‑M1/4‑35 (MQ=255) tATCAGCCACTTCCAGCGCACGATCCAGGCTatca > 1:14047530/1‑35 (MQ=255) tATCAGCCACTTCCAGCGCACGATCCAGGCTatca > 1:16857002/1‑35 (MQ=255) ccCAGCCCCTTCCAGCGCACGATCCAGGCTatcaa > 1:6040154‑M1/3‑35 (MQ=255) ccCAGCCACTTCCAGCGCACGATCCAGGCTatcaa > 1:15979654‑M1/3‑35 (MQ=255) cCAGCCCCTTCCAGCGCACGATCCAGGCTatcaat > 1:10651731‑M1/2‑35 (MQ=255) CAGCCACTTCCAGCGCACGATCCAGGctnncaann < 1:19714097‑M1/35‑3 (MQ=255) CAGCCACTTCCAGCGCACGATCCAGGCTatcaatc > 1:13942139‑M1/1‑35 (MQ=255) CAGCCACTTCCAGCGCACGATCCAGGCTatcaatc < 1:7721059‑M1/35‑1 (MQ=255) CAGCCACTTCCAGCGCACGATCCAGGCTatcaatc > 1:15643978‑M1/1‑35 (MQ=255) CAGCCACTTCCAGCGCACGATCCAGGCTatcaatc < 1:9585492‑M1/35‑1 (MQ=255) | TCAACCATCGCAGACATATCCGGGTTAGCTTTATCAGCCACTTCCAGCGCACGATCCAGGCTATCAATC > REL606/2671642‑2671710 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |