New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 422594 = | 77 (0.750) | 21 (0.230) | 4/42 | NT | 25.6% | intergenic (‑281/+181) | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
? | REL606 | 2573117 = | 55 (0.610) | intergenic (‑11/‑196) | yfhM/sseA | hypothetical protein/3‑mercaptopyruvate sulfurtransferase |
Only 100 of 266 total aligned reads displayed.
TAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTG > REL606/422560‑422628 | cgccgcgcggacccgccagggttttgtgagttgtg < 1:19826000‑M1/4‑1 (MQ=255) cgccgcgcggacccgccagggttttgtgagtggtg > 1:9446786‑M1/32‑35 (MQ=255) cgccgcgcggacccgccagggttttgtgagtggtg > 1:3423178‑M1/32‑35 (MQ=255) cgccgcgcggacccgccagggttttgtgagtggtg < 1:17214636‑M1/4‑1 (MQ=255) aattattcgacgttgctaacgggccattgtggcag > 1:2893837‑M1/35‑35 (MQ=255) aattattcgacgttgctaacgggccattgtggcag > 1:225289‑M1/35‑35 (MQ=255) aattattcgacgttgctaacgggccattgtggcag > 1:5218254‑M1/35‑35 (MQ=255) gggaacagccagcagaccaccggcgagagcGGTgg < 1:16657015‑M1/5‑1 (MQ=255) gggaacagccagcagaccaccggcgagagcGGTgg < 1:15688254‑M1/5‑1 (MQ=255) gggaacagccagcagaccaccggcgagagcGGTgg < 1:6219819‑M1/5‑1 (MQ=255) gccgcgcggacccgccagggttttgtgagtggtgg < 1:5513818‑M1/5‑1 (MQ=255) attattcgacgttgctaacgggccattgtggcagg < 1:3242126‑M1/2‑1 (MQ=255) attattcgacgttgctaacgggccattgtggcagg > 1:20172555‑M1/34‑35 (MQ=255) attattcgacgttgctaacgggccattgtggcagg > 1:627511‑M1/34‑35 (MQ=255) attattcgacgttgctaacgggccattgtggcagg < 1:18247369‑M1/2‑1 (MQ=255) accgaccggactgtaagattacatcggctgggggg < 1:16229267‑M1/2‑1 (MQ=255) accgaccggactgggagattacatcggctgggggg < 1:19098206‑M1/2‑1 (MQ=255) aaCAAATAATTATCATTATGGTGACAATtgggtgg < 1:18497296/35‑1 (MQ=255) aaCAAATAATTATCATTATGGTGACAATtgggtgg < 1:18646265/35‑1 (MQ=255) aaCAAATAATTATCATTATGGTGACAATtgggtgg < 1:5857928/35‑1 (MQ=255) ttattcgacgttgctaacgggccattgtggcgggg < 1:9242758‑M1/3‑1 (MQ=255) ttattcgacgttgctaacgggccattgtggcaggg < 1:7852538‑M1/3‑1 (MQ=255) ttattcgacgttgctaacgggccattgtggcaggg < 1:10997674‑M1/3‑1 (MQ=255) ttattcgacgttgctaacgggccattgtggcaggg < 1:9400693‑M1/3‑1 (MQ=255) ccgaccggactggaagattacatcggctgggtggg < 1:18972094‑M1/3‑1 (MQ=255) aCAAATAATTATCATTATGGTGACAATtgggtggg > 1:1212505/1‑35 (MQ=255) aCAAATAATTATCATTATGGTGACAATtgggtggg < 1:11431386/35‑1 (MQ=255) gaacagccagcagaccaccggcgagagcGGTgggg < 1:3698596‑M1/7‑1 (MQ=255) cgaccggactggaagattacatcggctgggggggg < 1:7411329‑M1/4‑1 (MQ=255) cgaccggactggaagattacatcggctgggggggg < 1:16872806‑M1/4‑1 (MQ=255) gaccggactggaagattacatcggctggggggggg < 1:5169051‑M1/5‑1 (MQ=255) gaccggactggaagattacatcggctggggggggg < 1:10077958‑M1/5‑1 (MQ=255) gaccggactggaagattacatcggctggggggggg < 1:13580606‑M1/5‑1 (MQ=255) aaaTAATTATCATTATGGTGACAATTGGGTggggg > 1:2604039/1‑35 (MQ=255) aaaTAATTATCATTATGGTGACAATTGGGTggggg < 1:11880185/35‑1 (MQ=255) aaaTAATTATCATTATGGTGACAATTGGGTggggg < 1:3783352/35‑1 (MQ=255) cgcggacccgccagggttttgtgagtGGTgggggg < 1:20111477‑M1/9‑1 (MQ=255) accggactggaagattacatcggctgggggggggg < 1:4258475‑M1/6‑1 (MQ=255) acagccagcagaccaccggcgagagcGGTgggggg < 1:5729844‑M1/9‑1 (MQ=255) acagccagcagaccaccggcgagagcGGTgggggg < 1:6998721‑M1/9‑1 (MQ=255) tcgacgttgctaacgggccattgtggcaggggggg < 1:13066548‑M1/7‑1 (MQ=255) tcgacgttgctaacgggccattgtggcagggggga < 1:4353793‑M1/7‑2 (MQ=255) gcggacccgccagggttttgtgagtGGTggggggg < 1:15860569‑M1/10‑1 (MQ=255) gcggacccgccagggttttgtgagtGGTggggggg < 1:1740012‑M1/10‑1 (MQ=255) gcggacccgccagggttttgtgagtGGTggggggg < 1:8810253‑M1/10‑1 (MQ=255) gcggacccgccagggttttgtgagtGGGggggggg < 1:4175635‑M1/10‑1 (MQ=255) cagccagcagaccaccggcgagcgcGGtggggggc < 1:11250385‑M1/10‑2 (MQ=255) ataatTATCATTATGGTGACAATTGGGTggggggg < 1:8555200/35‑1 (MQ=255) ggactggaagattacatcggctggggGGGGGGGaa < 1:11784737‑M1/9‑1 (MQ=255) gacgttgctaacgggcccttgtggcaGGGGGGGaa < 1:17686798‑M1/9‑1 (MQ=255) aatTATCATTATGGTGACAATTGGGTGGGGGGGaa < 1:2985585/35‑1 (MQ=255) gactggaagattacatcggctggggGGGGGGGaaa < 1:18016465‑M1/10‑1 (MQ=255) gactggaagattacatcggctggggGGGGGGGaaa < 1:6881235‑M1/10‑1 (MQ=255) gacccgccagggttttgtgagtGGTGGGGGggaga < 1:12340464‑M1/13‑3 (MQ=255) atTATCATTATGGTGACAATTGGGTGGGGGGGaaa < 1:11534059/35‑1 (MQ=255) atTATCATTATGGTGACAATTGGGTGGGGGGGaaa > 1:5196481/1‑35 (MQ=255) acgttgctaacgggccattgtggcaGGGGGGGaaa < 1:8911054‑M1/10‑1 (MQ=255) acgttgctaacgggccattgtggcaGGGGGGGaaa < 1:14088975‑M1/10‑1 (MQ=255) ttATCATTATGGTGACAATTGGGTGGGGGGGaaaa < 1:7476366/35‑1 (MQ=255) ttATCATTATGGTGACAATTGGGTGGGGGGGaaaa < 1:9855631/35‑1 (MQ=255) ttATCATTATGGTGACAATTGGGTGGGGGGGaaaa > 1:19709081/1‑35 (MQ=255) ttATCATTATGGTGACAATTGGGTGGGGGGGaaaa > 1:11489363/1‑35 (MQ=255) gactccggttccgtagcgggGGGAGGGGGGGaaaa < 1:6554989‑M1/15‑1 (MQ=255) cagcagaccaccggcgagagcGGTGGGGGGGaaaa < 1:15597821‑M1/14‑1 (MQ=255) actggaagattacatcggctggggGGGGGGgaaac < 1:18464002‑M1/11‑2 (MQ=255) actggaagattacatcggctggggGGGGGGGaaaa < 1:7743100‑M1/11‑1 (MQ=255) acccgccagggttttgtgagtGGTGGGGGGGgaaa < 1:16972737‑M1/14‑1 (MQ=255) acccgccagggttttgtgagtGGTGGGGGGGaaaa < 1:3172636‑M1/14‑1 (MQ=255) gttgctaacgggccattgtggcaGGGGGGgaaaaa < 1:17456784‑M1/12‑2 (MQ=255) gttgctaacgggccattgtggcaGGGGGGaaaaaa < 1:16331051‑M1/12‑2 (MQ=255) ctggaagattacatcggctggggGGGGGGGAAAAt < 1:2348719‑M1/12‑1 (MQ=255) ctggaagattacatcggctggggGGGGGGGAAAAt < 1:17894094‑M1/12‑1 (MQ=255) agcagaccaccggcgagagcGGTGGGGGGgaaaaa < 1:3051421‑M1/15‑2 (MQ=255) tggaagattacatcggctggggGGGGGAGAAAatt < 1:13785931‑M1/13‑2 (MQ=255) tCATTATGGTGACAATTGGGTGGGGGGGAAAATaa < 1:10255265/35‑1 (MQ=255) tCATTATGGTGACAATTGGGTGGGGGGGAAAATaa < 1:18750672/35‑1 (MQ=255) gctaacgggccattgtggcaGGGGGGGAaaatgaa < 1:13859741‑M1/15‑4 (MQ=255) cATTATGGTGACAATTGGGTGGGGGGGAAAATaaa < 1:3842277/35‑1 (MQ=255) tATGGTGACAATTGGGTGGGGGGGAAAATAAAGAc > 1:18225750/1‑35 (MQ=255) aTGGTGACAATTGGGTGGGGGGGAAAATAAAGACt < 1:683481/35‑1 (MQ=255) tGGTGACAATTGGGTGGGGGGGAAAATAAAGACTc > 1:1272309/1‑35 (MQ=255) tGGTGACAATTGGGTGGGGGGGAAAATAAAGACTc > 1:8574493/1‑35 (MQ=255) ggTGACAATTGGGTGGGGGGGAAAATAAAGACTCa > 1:11283749/1‑35 (MQ=255) ggTGACAATTGGGTGGGGGGGAAAATAAAGACTCa > 1:2125930/1‑35 (MQ=255) gACAATTGGGTGGGGGGGAAAATAAAGACTCATTa < 1:13429395/35‑1 (MQ=255) aCAATTGGGTGGGGGGGAAAATAAAGACTCATTAg < 1:18787402/35‑1 (MQ=255) cAATTGGGTGGGGGGGAAAATAAAGACTCATTAGc < 1:4628242/35‑1 (MQ=255) tgggtgggGGGGAAAATAAAGACTCATTAGCTGaa < 1:7247099/35‑1 (MQ=255) gggtgggGGGGAAAATAAAGACTCATTAGCTGAAt > 1:12252054/1‑35 (MQ=255) gggtgggGGGGAAAATAAAGACTCATTAGCTGAAt > 1:16147184/1‑35 (MQ=255) GGTGGGGGGGAAAATAAAGACTCATTAGCTGAATc > 1:9026973‑M1/1‑35 (MQ=255) GGTGGGGGGGAAAATAAAGACTCATTAGCTGAATc > 1:10535549‑M1/1‑35 (MQ=255) GGTGGGGGGGAAAATAAAGACTCATTAGCTGAATc > 1:8085840‑M1/1‑35 (MQ=255) GGTGGGGGGGAAAATAAAGACTCATTAGCTGAATc > 1:13457696‑M1/1‑35 (MQ=255) GGTGGGGGGGAAAATAAAGACTCATTAGCTGAATc > 1:14703611‑M1/1‑35 (MQ=255) GGTGGGGGGGAAAATAAAGACTCATTAGCTGAATc < 1:15359976‑M1/35‑1 (MQ=255) GGTGGGGGGGAAAATAAAGACTCATTAGCTGAATc > 1:4748879‑M1/1‑35 (MQ=255) GGTGGGGGGGAAAATAAAGACTCATTAGCTGAATc > 1:4957172‑M1/1‑35 (MQ=255) GGGGGGGAAAATAAAGACTCATTAGCTGAATCgtg > 1:14960083‑M1/1‑35 (MQ=255) GGGGGGGAAAATAAAGACTCATTAGCTGAATCgtg < 1:10450871‑M1/35‑1 (MQ=255) | TAACAAATAATTATCATTATGGTGACAATTGGGTGGGGGGGAAAATAAAGACTCATTAGCTGAATCGTG > REL606/422560‑422628 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |