Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,454,489 | IS150 (+) +4 bp | 38.1% | coding (342‑345/561 nt) | yrfE ← | ADP‑ribose diphosphatase |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3454489 = | 74 (0.860) | 46 (0.450) | 30/48 | NT | 34.1% | coding (345/561 nt) | yrfE | ADP‑ribose diphosphatase |
? | REL606 | = 3652533 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 3454492 | 74 (0.860) | 45 (0.440) | 28/48 | NT | 33.6% | coding (342/561 nt) | yrfE | ADP‑ribose diphosphatase |
? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region |
GAACGATCTGACTTTTTTGAAGAAGCTCAGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3454522‑3454489 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAA < REL606/3652533‑3652504 GAACGATCTGACTTTTTTGAAGAAGCTCAGCATGT > 1:1003681/1‑35 GAACGATCTGACTTTTTTGAAGAAGCTCAGCATGT < 1:120920/35‑1 AACGATCTGACTTTTTTGAAGAAGCTCAGCATGTG < 1:11751544/35‑1 AACGATCTGACTTTTTTGAAGAAGCTCAGCATGTG < 1:16455265/35‑1 AACGATCTGACTTTTTTGAAGAAGCTCAGCATGTG > 1:15555021/1‑35 ACGATCTGACTTTTTTGAAGAAGCTCAGCATGTGT < 1:5403234/35‑1 GATCTGACTTTTTTGAAGAAGCTCAGCATGTGTAC > 1:8924311/1‑35 GATCTGACTTTTTTGAAGAAGCTCAGCATGTGTAC > 1:6469461/1‑35 GATCTGACTTTTTTGAAGAAGCTCAGCATGTGTAC < 1:20486435/35‑1 GATCTGACTTTTTTGAAGAAGCTCAGCATGTGTAC < 1:13232662/35‑1 ATCTGACTTTTTTGAAGAAGCTCAGCATGTGTACT > 1:11142464/1‑35 ATCTGACTTTTTTGAAGAAGCTCAGCATGTGTACT > 1:19131341/1‑35 CTGACTTTTTTGAAGAAGCTAAGCATGTGTACTGA < 1:13779263/35‑1 TGACTTTTTTGAAGAAGCTCAGCATGTGTACTGAC < 1:3374126/35‑1 TGACTTTTTTGAAGAAGCTCAGCATGTGTACTGAC > 1:18499596/1‑35 TGACTTTTTTGAAGAAGCTCAGCATGTGTACTGAC < 1:13913557/35‑1 GACTTTTTTGAAGAAGCTCAGCATGTGTACTGACC > 1:3151671/1‑35 GACTTTTTTGAAGAAGCTCAGCATGTGTACTGACC < 1:15868853/35‑1 ACTTTTTTGAAGAAGCTCAGCATGTGTACTGACCC < 1:4288544/35‑1 CTTTTTTGAAGAAGCTCAGCATGTGTACTGACCCC > 1:10780739/1‑35 CTTTTTTGAAGAAGCTCAGCATGTGTACTGACCCC > 1:15885676/1‑35 TTTTTTGAAGAAGCTCAGCATGTGTACTGACCCCA < 1:20188610/35‑1 TTTTGAAGAAGCTCAGCATGTGTACTGACCCCAAA < 1:11254879/35‑1 TTTGAAGAAGCTCAGCATGTGTACTGACCCCAAAA < 1:8760766/35‑1 TTTGAAGAAGCTCAGCATGTGTACTGACCCCAAAA > 1:18812030/1‑35 TTGAAGAAGCTCAGCATGTGTACTGACCCCAAAAA < 1:2977526/35‑1 TGAAGAAGCTCAGCATGTGTACTGACCCCAAAAAG < 1:2934403/35‑1 TGAAGAAGCTCAGCATGTGTACTGACCCCAAAAAG > 1:8524272/1‑35 GAAGAATCTCAGCATGTGTACTGACCCCAAAAAGT > 1:7860611/1‑35 GAAGAAGCTCAGCATGTGTACTGACCCCAAAAAGT < 1:17938629/35‑1 GAAGAAGCTCAGCATGTGTACTGACCCCAAAAAGT > 1:12549422/1‑35 GAAGAAGCTCAGCATGTGTACTGACCCCAAAAAGT > 1:20398390/1‑35 GAAGAAGCTCAGCATGTGTACTGACCCCAAAAAGT < 1:243477/35‑1 AAGAAGCTCAGCATGTGTACTGACCCCAAAAAGTT < 1:13132799/35‑1 AAGAAGCTCAGCATGTGTACTGACCCCAAAAAGTT < 1:17079935/35‑1 AAGAAGCTCAGCATGTGTACTGACCCCAAAAAGTT > 1:8506691/1‑35 AGAAGCTCAGCATGTGTACTGACCCCAAAAAGTTG < 1:16934355/35‑1 AGAAGCTCAGCATGTGTACTGACCCCAAAAAGTTG < 1:3820963/35‑1 GAAGCTCAGCATGTGTACTGACCCCAAAAAGTTGG > 1:15807699/1‑35 AAGCTCAGCATGTGTACTGACCCCAAAAAGTTGGA > 1:4345026/1‑35 AGCTCAGCATGTGTACTGACCCCAAAAAGTTGGAC < 1:807647/35‑1 AGCTCAGCATGTGTACTGACCCCAAAAAGTTGGAC < 1:14884722/35‑1 AGCTCAGCATGTGTACTGACCCCAAAAAGTTGGAC > 1:14588141/1‑35 AGCTCAGCATGTGTACTGACCCCAAAAAGTTGGAC < 1:8052148/35‑1 GCTCAGCATGTGTACTGACCCAAAAAAGTTGGACA < 1:3076454/35‑1 GCTCAGCATGTGTACTGACCCAAAAAAGTTGGACA < 1:6829751/35‑1 CTCAGCATGTGTACTGACCCCAAAAAGTTGGACAG > 1:18315718/1‑35 TCAGCATGTGTACTGACCCCAAAAAGTTGGACAGT > 1:567302/1‑35 TCAGCATGTGTACTGACCCCAAAAAGTTGGACAGT > 1:20241455/1‑35 CAGCATGTGTACTGACCCCAAAAAGTTGGACAGTT > 1:11949655/1‑35 CAGCATGTGTACTGACCCCAAAAAGTTGGACAGTT > 1:16557741/1‑35 cGCATTTGTACTGACCCCAAAAAGTTGGACAGTTA < 1:18422534/34‑1 AGCATGTGTACTGGCCCCAAAAAGTTGGACAGTTA < 1:6494667/35‑1 AGCATGTGTACTGACCCCAAAAAGTTGGACAGTTA > 1:9392618/1‑35 AGCATGTGTACTGACCCCAAAAAGTTGGACAGTTA > 1:11384628/1‑35 AGCATGTGTACTGACCCCAAAAAGTTGGACAGTTA < 1:12167302/35‑1 AGCATGTGTACTGACCCCAAAAAGTTGGACAGTTA > 1:15881516/1‑35 gaATGTGTACTGACCCCAAAAAGTTGGACAGTTAA > 1:6813743/3‑35 cgtTGTGTACTGACCCCAAAAAGTTGGACAGTTAA < 1:16084929/32‑1 GCATGTGTACTGACCCCAAAAAGTTGGACAGTTAA > 1:20284626/1‑35 GCATGTGTACTGACCCCAAAAAGTTGGACAGTTAA < 1:14701120/35‑1 GAACGATCTGACTTTTTTGAAGAAGCTCAGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3454522‑3454489 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAA < REL606/3652533‑3652504 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |