Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | REL606 | 4,100,183 | A→G | 100% | S350P (TCT→CCT) | hslU ← | ATP‑dependent protease ATP‑binding subunit |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 4,100,183 | 0 | A→G | 100.0% | 483.2 | 139 | S350P (TCT→CCT) | hslU | ATP‑dependent protease ATP‑binding subunit |
Reads supporting (aligned to +/- strand): new base (54/85): ref base (0/0): total (54/85) |
Only 100 of 141 total aligned reads displayed.
CGCCATCAGTGCTTTGTACTGCACGGTGATAGAGGCATTCGGCTCGGTCAGAATACGCTCGAAG > REL606/4100151‑4100214 | cGCCATCAGTGCTTTGTACTGCACGGTGATAGGgg < 1:13855544/35‑1 (MQ=255) cGCCATCAGTGCTTTGTACTGCACGGTGATAGGgg < 1:796030/35‑1 (MQ=255) cGCCATCAGTGCTTTGTACTGCACGGTGATAGGgg < 1:11597512/35‑1 (MQ=255) gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc > 1:17871286/1‑35 (MQ=255) gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc < 1:13281745/35‑1 (MQ=255) gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc < 1:13117162/35‑1 (MQ=255) gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc < 1:20028032/35‑1 (MQ=255) gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc < 1:5763019/35‑1 (MQ=255) gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc > 1:10611631/1‑35 (MQ=255) gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc < 1:8550566/35‑1 (MQ=255) ccATCAGTGCTTTGTACTGCACGGTGATAGGGGCa > 1:8351863/1‑35 (MQ=255) cATCAGTGCTTTGTACTGCACGGTGATAGGGGCAt > 1:6092139/1‑35 (MQ=255) cATCAGTGCTTTGTACTGCACGGTGATAGGGGCAt < 1:18638200/35‑1 (MQ=255) cATCAGTGCTTTGTACTGCACGGTGATAGGGGCAt < 1:17418399/35‑1 (MQ=255) tCAGTGCTTTGTACTGCACGGTGATAGGGGCATTc < 1:4143621/35‑1 (MQ=255) tCAGTGCTTTGTACTGCACGGTGATAGGGGCATTc < 1:2265120/35‑1 (MQ=255) tCAGTGCTTTGTACTGCACGGTGATAGGGGCATTc < 1:18705815/35‑1 (MQ=255) tCAGTGCTTTGTACTGCACGGTGATAGGGGCATTc < 1:13661706/35‑1 (MQ=255) tCAGTGCTTTGTACTGCACGGTGATAGGGGCATTc < 1:10015879/35‑1 (MQ=255) tCAGTGCTTTGTACTGCACGGTGATAGGGGCATTc < 1:10740674/35‑1 (MQ=255) cAGTGCTTTGTACTGCACGGTGATAGGGGCATTCg < 1:6669309/35‑1 (MQ=255) cAGTGCTTTGTACTGCACGGTGATAGGGGCATTCg > 1:4079900/1‑35 (MQ=255) cAGTGCTTTGTACTGCACGGTGATAGGGGCATTCg < 1:10034679/35‑1 (MQ=255) cAGTGCTTTGTACTGCACGGTGATAGGGGCATTCg > 1:1802361/1‑35 (MQ=255) cAGTGCTTTGTACTGCACGGTGATAGGGGCATTCg < 1:12380941/35‑1 (MQ=255) aGTGCTTTGTACTGCACGGTGGTAGGGGCATTCgg < 1:13657603/35‑1 (MQ=38) aGTGCTTTGTACTGCACGGTGATAGGGGCATTCgg > 1:5529004/1‑35 (MQ=255) aGTGCTTTGTACTGCACGGTGATAGGGGCATTCgg < 1:8995654/35‑1 (MQ=255) aGTGCTTTGTACTGCACGGTGATAGGGGCATTCgg > 1:7402214/1‑35 (MQ=255) aGTGCTTTGTACTGCACGGTGATAGGGGCATTCgg < 1:709013/35‑1 (MQ=255) aGTGCTTTGTACTGCACGGTGATAGGGGCATTCgg < 1:5192996/35‑1 (MQ=255) gTGCTTTGTACTGCACGGTGATAGGGGCATTCGGc > 1:7724212/1‑35 (MQ=255) gTGCTTTGTACTGCACGGTGATAGGGGCATTCGGc > 1:10161403/1‑35 (MQ=255) gTGCTTTGTACTGCACGGTGATAGGGGCATTCGGc > 1:16639694/1‑35 (MQ=255) gTGCTTTGTACTGCACGGTGATAGGGGCATTCGGc > 1:17585700/1‑35 (MQ=255) tGCTTTGTACTGCACGGTGATAGGGGCATTCGGCt < 1:844084/35‑1 (MQ=255) tGCTTTGTACTGCACGGTGATAGGGGCATTCGGCt < 1:5435178/35‑1 (MQ=255) tGCTTTGTACTGCACGGTGATAGGGGCATTCGGCt < 1:17418604/35‑1 (MQ=255) tGCTTTGTACTGCACGGTGATAGGGGCATTCGGCt < 1:9200487/35‑1 (MQ=255) gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc > 1:20352546/1‑35 (MQ=255) gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc < 1:2830020/35‑1 (MQ=255) gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc < 1:19671241/35‑1 (MQ=255) gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc < 1:13108997/35‑1 (MQ=255) gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc > 1:8091110/1‑35 (MQ=255) gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc < 1:3915193/35‑1 (MQ=255) gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc < 1:17081130/35‑1 (MQ=255) cTTTGTACTGCACGGTGATAGGGGCATTCGGCTCg < 1:13211770/35‑1 (MQ=255) cTTTGTACTGCACGGTGATAGGGGCATTCGGCTCg < 1:6764151/35‑1 (MQ=255) cTTTGTACTGCACGGTGATAGGGGCATTCGGCTCg > 1:18346551/1‑35 (MQ=255) cTTTGTACTGCACGGTGATAGGGGCATTCGGCTCg < 1:3256461/35‑1 (MQ=255) cTTTGTACTGCACGGTGATAGGGGCATTCGGCTCg < 1:15165816/35‑1 (MQ=255) cTTTGTACTGCACGGTGATAGGGGCATTCGGCTCg < 1:16079319/35‑1 (MQ=255) tttGTACTGCACGGTGATAGGGGCATTCGGCTCgg > 1:2404673/1‑35 (MQ=255) tttGTACTGCACGGTGATAGGGGCATTCGGCTCgg > 1:1415148/1‑35 (MQ=255) tttGTACTGCACGGTGATAGGGGCATTCGGCTCgg > 1:20505823/1‑35 (MQ=255) ttGTACTGCACGGTGATAGGGGCATTCGGCTCggg > 1:17020672/1‑34 (MQ=255) ttGTACTGCACGGTGATAGGGGCATTCGGCTCggg > 1:15378430/1‑34 (MQ=255) ttGTACTGCACGGTGATAGGGGCATTCGGCTCggg > 1:18142540/1‑34 (MQ=255) ttGTACTGCACGGTGATAGGGGCATTCGGCTCggg > 1:11833561/1‑34 (MQ=255) ttGTACTGCACGGTGATAGGGGCATTCGGCTCGGt < 1:8909580/35‑1 (MQ=255) ttGTACTGCACGGTGATAGGGGCATTCGGCTCGGt < 1:14656007/35‑1 (MQ=255) ttGTACTGCACGGTGATAGGGGCATTCGGCTCGGt < 1:16585580/35‑1 (MQ=255) tGTACTGCACGGTGATAGGGGCATTCGGCTCGGTc < 1:2001888/35‑1 (MQ=255) tGTACTGCACGGTGATAGGGGCATTCGGCTCGGTc < 1:6580470/35‑1 (MQ=255) gTACTGCACGGTGATAGGGGCATTCGGCTCGGTCa > 1:9902961/1‑35 (MQ=255) gTACTGCACGGTGATAGGGGCATTCGGCTCGGTCa < 1:5151778/35‑1 (MQ=255) gTACTGCACGGTGATAGGGGCATTCGGCTCGGTCa < 1:6699674/35‑1 (MQ=255) gTACTGCACGGTGATAGGGGCATTCGGCTCGGTCa > 1:20537926/1‑35 (MQ=255) gTACTGCACGGTGATAGGGGCATTCGGCTCGGGCa > 1:15847396/1‑35 (MQ=37) tACTGCACGGTGATAGGGGCATTCGGCTCGGGCAg > 1:5269004/1‑35 (MQ=37) aCTGCACGGTGATAGGGGCATTCGGCTCGGTCAGa < 1:16240211/35‑1 (MQ=255) aCTGCACGGTGATAGGGGCATTAGGCTCGGTCAGa < 1:11720149/35‑1 (MQ=37) cTGCACGGTGATAGGTGCATTCGGCTCCGGCAGaa > 1:19439427/1‑35 (MQ=16) cTGCACGGTGATAGGGGCATTCGGCTCGGTCAGaa < 1:6400774/35‑1 (MQ=255) cTGCACGGTGATAGGGGCATTCGGCTCGGTCAGaa < 1:6190625/35‑1 (MQ=255) cTGCACGGTGATAGGGGCATTCGGCTCGGGCAGaa > 1:2014072/1‑35 (MQ=37) cTGCACGGTGATAGGGGCATTCGGCTCGGGCAGaa > 1:14491527/1‑35 (MQ=37) tGCACGGTGATAGGGGCATTCGGCTCGGTCAGAAt < 1:5515781/35‑1 (MQ=255) tGCACGGTGATAGGGGCATTCGGCTCGGTAAGAAt < 1:2423327/35‑1 (MQ=37) tGCACGGTGATAGGGGCATTCGGCTCGGGCAGGAt > 1:9494549/1‑35 (MQ=25) tGCACGGTGATAGGGGCATTCGGCTCGGGCAGAAt > 1:3520178/1‑35 (MQ=37) gCACGGTGATAGGGTCATTCGGCTCGGTCAGAATa < 1:3967650/35‑1 (MQ=38) gCACGGTGATAGGGGCATTCGGCTCGGGCCGAATa > 1:9942075/1‑35 (MQ=25) gCACGGTGATAGGGGCATTCGGCTCGGGCAGAATa > 1:5846989/1‑35 (MQ=37) catggTGATAGGGGCATTCGGCTCGGGCCGAATAc > 1:7632434/4‑35 (MQ=19) cACGGTGATAGGGGCGTTGGGCTCGGTCAGAATAc < 1:476074/35‑1 (MQ=255) cACGGTGATAGGGGCATTCGGCTCGGTCAGAATAc < 1:1865477/35‑1 (MQ=255) aCGGTGATAGGGGCATTCGGCTCGGTCAGAATACg < 1:14146317/35‑1 (MQ=255) ggTGATAGGGGCATTCGGCTCGGTCAGAATACGCt < 1:16412481/35‑1 (MQ=255) ggTGATAGGGGCATTCGGCTCGGTCAGAATACGCt < 1:17054113/35‑1 (MQ=255) ggTGATAGGGGCATTCGGCTCGGGCAGAATACGCt > 1:15770422/1‑35 (MQ=37) gTGATAGGGGCATTCGGCTCGGTCAGAATACGCTc < 1:17681707/35‑1 (MQ=255) gTGATAGGGGCATTCGGCTCGGTCAGAATACGCTc < 1:13443531/35‑1 (MQ=255) gTGATAGGGGCATTCGGCTCGGTCAGAATACGCTc < 1:4491759/35‑1 (MQ=255) gTGATAGGGGCATTCGGCTCGGTCAGAATACGCTc < 1:6959506/35‑1 (MQ=255) tGATAGGGGCATTCGGCTCGGTCAGAATACGCTCg < 1:7914686/35‑1 (MQ=255) tGATAGGGGCATTCGGCTCGGTCAGAATACGCTCg < 1:20229864/35‑1 (MQ=255) aTAGGGGCATTCGGCTCGGTCAGAATACGCTCGaa < 1:15543532/35‑1 (MQ=255) aTAGGGGCATTCGGCTCGGTCAGAATACGCTCGaa < 1:12232240/35‑1 (MQ=255) tAGGGGCATTCGGCTCGGTCAGAATACGCTCGAAg < 1:18373005/35‑1 (MQ=255) | CGCCATCAGTGCTTTGTACTGCACGGTGATAGAGGCATTCGGCTCGGTCAGAATACGCTCGAAG > REL606/4100151‑4100214 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |