New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1774429 | 43 (0.420) | 8 (0.090) | 4/40 | NT | 14.3% | coding (783/2388 nt) | pheT | phenylalanyl‑tRNA synthetase beta subunit |
? | REL606 | = 2595910 | 60 (0.700) | coding (551/1062 nt) | yphC | predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding |
Only 100 of 148 total aligned reads displayed.
TTTCGCCAGCATCATCGCCATCATGCCGACCGGCCCCAGACCGACCACCAGCACGTTATCGCTGCCGGA > REL606/2595876‑2595944 | tttCGCCAGCATCATCGCCATCATGCCGACCGGcc < 1:14472012/35‑1 (MQ=255) tttCGCCACCATCATCGCCATCATGCCGACCGGcc < 1:8138685/35‑1 (MQ=255) ttccGCCAGCATCATCGCCATCATGCCGACCGGcc < 1:1474666/32‑1 (MQ=255) nttCGCCAGCATCATCGCCATCATGCCGACCGGcc > 1:17949968/2‑35 (MQ=255) ttCGCCAGCATCATCGCCATCATGCCGACCTGCCc < 1:6381408‑M2/35‑2 (MQ=255) ttCGCCAGCATCATCGCCATCATGCCGACCGGCCc < 1:14849992‑M2/35‑2 (MQ=255) ttCGCCAGCATCATCGCCATCATGCCGACCGGCCc < 1:12168262‑M2/35‑2 (MQ=255) ttCGCCAGCATCATCGCCATCATGCCGACCGGCCc > 1:5315485‑M2/1‑34 (MQ=255) ttCGCCAGCATCATCGCCATCATGCCGACCGGCCc < 1:5283613‑M2/35‑2 (MQ=255) ccccAGCATAATCGCCATCATGCCGACCGGCCCCa < 1:19101261/33‑1 (MQ=37) ccccAGCACCATCGCCATCATGCCGACCGGCCCCa < 1:19762076/33‑1 (MQ=25) cGCCAGCATCATCGCCATCATGCCGACCGGCCcca < 1:11533596‑M2/35‑4 (MQ=255) cGCCAGCATCATCGCCATCATGCCGACCGGCCcca > 1:18159654‑M2/1‑32 (MQ=255) cGCCAGCATCATCGCCATCATGCCGACCGGCCcca < 1:17601995‑M2/35‑4 (MQ=255) gCCAGCATCATCGCCATCATGCCGACCGGCCccag < 1:19877588‑M2/35‑5 (MQ=255) gCCAGCATCATCGCCATCATGCCGACCGGCCccag > 1:11973439‑M2/1‑31 (MQ=255) gCCAGCATCATCGCCATCATGCCGACCGGCCccag < 1:18869087‑M2/35‑5 (MQ=255) gCCAGCATCATCGCCATCATGCCGACCGGCCccag > 1:783797‑M2/1‑31 (MQ=255) gCCAGCATCATCGCCATCATGCCGACCGGCCccag < 1:15316427‑M2/35‑5 (MQ=255) gCCAGCATCATCGCCATCACGCCGACCGGCCccag < 1:11373628‑M2/35‑5 (MQ=255) ccAGCATCATCGCCATCATGCCGACCGGCCCCAga < 1:16850569/35‑1 (MQ=255) ccAGCATCATCGCCATCATGCAGACCGGCCCCAga < 1:7222293/35‑1 (MQ=255) cAGCATCATCGCCATCATGCCGACCGGCCCCAgac > 1:1508180/1‑35 (MQ=255) cAGCATCATCGCCATCATGCCGACCGGCCCCAgac > 1:14037485/1‑35 (MQ=255) cAGCATCATCGCCATCATGCCGACCGGCCCCAgac > 1:15941749/1‑35 (MQ=255) cAGCATCATCGCCATCATGCCGACCGGCCCCAgac < 1:12802036/35‑1 (MQ=255) cAGCATCATCGCCATCATGCCGACCGGCCCCAgac > 1:7604610/1‑35 (MQ=255) aGCATCATCGCCATCATGCCGACCGGCCCCAgacc > 1:18713040/1‑35 (MQ=255) aGCATCATCGCCATCATGCCGACCGGCCCCAgacc < 1:4418571/35‑1 (MQ=255) aGCATCATCGCCATCATGCCGACCGGCCCCAgacc < 1:431178/35‑1 (MQ=255) aGCATCATCGCCATCATGCCGACCGGCCCCAgacc > 1:8937700/1‑35 (MQ=255) aGCATCATCGCCATCATGCAGACCGGCCCCAgacc < 1:11713962/35‑1 (MQ=255) catcatCGCCATCATGCCGACCGGCCCCAgaccga > 1:15817553/1‑35 (MQ=255) catcatCGCCATCATGCCGACCGGCCCCAgaccga > 1:10223792/1‑35 (MQ=255) atcatcGCCATCATGCCGACCGGCCCCAgaccgac > 1:20336654/1‑35 (MQ=255) atcatcGCCATCATGCCGACCGGCCCCAgaccgac > 1:1403504/1‑35 (MQ=255) tcatcGCCATCATGCCGACCGGCCCCAgaccgacc > 1:14432274/1‑35 (MQ=255) gcatcGCCATCATGCCGACCGGCCCCAgaccgacc < 1:15390626/34‑1 (MQ=255) catcGCCATCATGCCGACCGGCCCCAGACCGacca < 1:10712135/35‑1 (MQ=255) catcGCCATCATGCCGACCGGCCCCAGACCGacca > 1:11534724/1‑35 (MQ=255) catcGCCATCATGCCGACCGGCCCCAGACCGacca < 1:13126025/35‑1 (MQ=255) atcGCCATCATGCCGACCGGCCCCAGACCGaccac > 1:19167626/1‑35 (MQ=255) atcGCCATCATGCCGACCGGCCCCAGACCGaccac < 1:16975363/35‑1 (MQ=255) tcGCCATCATGCCGACCGGCCCCAGACCGaccacc > 1:16498917/1‑35 (MQ=255) tcGCCATCATGCCGACCGGCCCCAGACCGaccacc > 1:1656883/1‑35 (MQ=255) tcGCCATCATGCCGACCGGCCCCAGACCGaccacc > 1:16008106/1‑35 (MQ=255) tcGCCATCATGCCGACCGGCCCCAGACCGaccacc < 1:13709336/35‑1 (MQ=255) gcGCCAGCATGCCGACCGGCCCCAGACCGaccacc < 1:16265339/34‑1 (MQ=255) cGCCATCATGCCGACCGGCCCCAGACCGAcgacca < 1:10333284/35‑1 (MQ=255) cGCCATCATGCCGACCGGCCCCAGACCGAccacca < 1:5598571/35‑1 (MQ=255) gCCATCATGCCGACCGGCCCCAGACCGACCACCAg > 1:14509788/1‑35 (MQ=255) gCCATCATGCCGACCGGCCCCAGACCGACCACCAg < 1:14393429/35‑1 (MQ=255) gCCATCATGCCGACCGGCCCCAGACCGACCACCAg > 1:7271699/1‑35 (MQ=255) atcatGCCGACCGGCCCCAGACCGACCACCAGCAc > 1:13735685/1‑35 (MQ=255) atcatGCCGACCGGCCCCAGACCGACCACCAGCAc > 1:4821487/1‑35 (MQ=255) tcatGCCGACCGGCCCCAGACCGACCACCAGCACg > 1:5266445/1‑35 (MQ=255) catGCCGACCGGCCCCAGACCGACCACCAGCACGt > 1:4094955/1‑35 (MQ=255) catGCCGACCGGCCCCAGACCGACCACCAGCACGt > 1:4910632/1‑35 (MQ=255) catGCCGACCGGCCCCAGACCGACCACCAGCACGt > 1:12532897/1‑35 (MQ=255) atGCCGACCGGCCCCAGACCCACCACCAGCACGtt > 1:469895/1‑35 (MQ=255) gCCGACCGGCCCCAGCCCGCCCACCAGCACGTTAt < 1:2923724/35‑1 (MQ=37) gCCGACCGGCCCCAGACCGACCACCAGCACGtaga > 1:7007187/1‑32 (MQ=255) gCCGACCGGCCCCAGACCGACCACCAGCACGTTAt > 1:10887368/1‑35 (MQ=255) gCCGACCGGCCCCAGACCGACCACCAGCACGTTAt > 1:3856585/1‑35 (MQ=255) cccgACCGGCCccagccgatgcacgctttcgataa > 1:11291789‑M2/2‑11 (MQ=255) ccGACCGGCCccagccgatgcacgctttcgataaa > 1:4390020‑M2/1‑10 (MQ=255) ccGACCGGCCCCAGCCCGCCCACCAGCACGTTATc < 1:17968264/35‑1 (MQ=37) ccGACCGGCCCCAGACCGACCACCAGCACGTTATc > 1:6194814/1‑35 (MQ=255) cGACCGGCCccagccgatgcacgctttcgataaag > 1:8516287‑M2/1‑9 (MQ=255) gcccGGCCCCAGACAGACCACCAGCACGTTATCGc < 1:7441408/33‑1 (MQ=37) gACCGGCCCCAGCCCGCCCACCAGCACGTTATCGc < 1:6234935/35‑1 (MQ=37) gACCGGCCCCAGACCGACCACCAGCACGTTATCGc > 1:9365472/1‑35 (MQ=255) gACCGGCCCCAGACCGACCACCAGCACGTTATCGc > 1:15929251/1‑35 (MQ=255) ccccGCCccagccgatgcacgctttcgataaagat > 1:6852737‑M2/2‑7 (MQ=255) aCCGGGCccagccgatgcacgctttcgataaagat > 1:12593048‑M2/1‑7 (MQ=255) aCCGGCCCCAGACCGACCACCAGCACGTTATCGCt > 1:636729/1‑35 (MQ=255) ccGGCCCCAGACCGACCACCAGCACGTTATCTCTg > 1:11134808/1‑35 (MQ=255) ccCGCCccagccgatgcacgctttcgataaagatc > 1:1208349‑M2/1‑6 (MQ=255) cGGCCccagccgatgcacgctttcgataaagatcg > 1:3966051‑M2/1‑5 (MQ=255) cGGCCCCAGACCGACCACCAGCACGTTATCGCttc > 1:18694060/1‑33 (MQ=255) cGGCCCCAGACCGACCACCAGCACGTTATCGCTGc > 1:1204356/1‑35 (MQ=255) ggCCccagccgatgcacgctttcgataaagatcgc > 1:15012455‑M2/1‑4 (MQ=255) ggCCCCAGACCGACCACCAGCACGTTATCGCTGcc > 1:19369989/1‑35 (MQ=255) ggCCCCAGACCGACCACCAGCACGTTATCGCTGcc > 1:19570914/1‑35 (MQ=255) gcccccAGCCCGCCCACCAGCACGTTATCGCTGcc < 1:3306990/33‑1 (MQ=21) cgcCccagccgatgcacgctttcgataaagatcgc > 1:19033125‑M2/2‑4 (MQ=255) cgcCccagccgatgcacgctttcgataaagatcgc > 1:12213351‑M2/2‑4 (MQ=255) cgcCccagccgatgcacgctttcgataaagatcgc > 1:5716693‑M2/2‑4 (MQ=255) ggcccagccgatgcacgctttcgataaagatcgca > 1:10067001‑M2/3‑3 (MQ=255) gCCCCAGACCGACCACCAGCACGTTATCGCTGCCg > 1:11085610/1‑35 (MQ=255) gCCCCAGACCGACCACCAGCACGTTATCGCTGCCg > 1:4268380/1‑35 (MQ=255) cccccagccgatgcacgctttcgataaagatcgca > 1:16762365‑M2/2‑3 (MQ=255) gcccagccgatgcacgctttcgataaagatcgcat > 1:14953498‑M2/2‑2 (MQ=255) cccagccgatgcacgctttcgataaagatcgcatt > 1:15122842‑M2/1‑1 (MQ=255) cccagccgatgcacgctttcgataaagatcgcatt > 1:14161753‑M2/1‑1 (MQ=255) cccagccgatgcacgctttcgataaagatcgcatt > 1:7919196‑M2/1‑1 (MQ=255) cccagccgatgcacgctttcgataaagatcgcatt > 1:20276736‑M2/1‑1 (MQ=255) cccAGACCGACCACCAGCACGTTATCGCTGcctca > 1:20262607/1‑32 (MQ=255) cccAGACCGACCACCAGCACGTTATCGCTGCCGGa > 1:15867823/1‑35 (MQ=255) cccAGACCGACCACCAGCACGTTATCGCTGCCGGa > 1:5692648/1‑35 (MQ=255) | TTTCGCCAGCATCATCGCCATCATGCCGACCGGCCCCAGACCGACCACCAGCACGTTATCGCTGCCGGA > REL606/2595876‑2595944 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |