Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 2,775,410 | 0 | C→G | 100.0% | 1.1 | 9 | D141H (GAC→CAC) | insJ‑3 | IS150 hypothetical protein |
Rejected: E-value exceeds prediction threshold. | ||||||||||
Reads supporting (aligned to +/- strand): new base (7/0): ref base (2/0): total (9/0) |
CTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTG > REL606/2775380‑2775430 | cTTGCCTTTCAAGATCCTCAATGCGTCGGGGtttt > 1:6932096/1‑35 (MQ=1) cTTGCCTTTCAAGATCCTCAATGCGTCGGGGtttt > 1:17328966/1‑35 (MQ=1) cTTGCCTTTCAAGATCCTCAATGCGTCGGGGtttt > 1:16753494/1‑35 (MQ=1) cTTGCCTTTCAAGATCCTCAATGCGTCGGGGtttt > 1:11657568/1‑35 (MQ=1) cTTGCCTTTCAAGATCCTCAATGCGTCGGGCtctt > 1:14379562/1‑35 (MQ=1) ttGCCTTTCAAGATCCTCAATGCGTCGGGGttttt > 1:16716484/1‑34 (MQ=1) ttGCCTTTCAAGATCCTCAATGCGTCGGGGttttt > 1:15196679/1‑34 (MQ=1) ttGCCTTTCAAGATCCTCAATGCGTCGGGGttttt > 1:12658372/1‑34 (MQ=1) ttGCCTTTCAAGATCCTCAATGCGTCGGGGttttt > 1:10064914/1‑34 (MQ=1) ttGCCTTTCAAGATCCTCAATGCGTCGGGGttttt > 1:10211509/1‑34 (MQ=1) tGCCTTTCAAGATCCTCAATGCGTCGGGGttttta > 1:13811759/1‑33 (MQ=1) tGCCTTTCAAGATCCTCAATGCGTCGGGGttttta > 1:12389394/1‑33 (MQ=1) tGCCTTTCAAGATCCTCAATGCGTCGGGGttttta > 1:18965648/1‑33 (MQ=1) tGCCTTTCAAGATCCTCAATGCGTCGGGGttttta > 1:20522210/1‑33 (MQ=1) gCCTTTCAAGATCCTCAATGCGTCGGGGTTTTTAc > 1:19896986/1‑35 (MQ=1) cTTTCAAGATCCTCAATGCGTCGGGCTTTTTAccg > 1:5624011/1‑33 (MQ=1) tttCAAGATCCTCAATGCGTCGGGGTTTTTGCAGc > 1:3199751/1‑35 (MQ=0) tttCAAGATCCTCAATGCGTCGGGCTTTTTACCGc > 1:18442725/1‑35 (MQ=1) tCAAGATCCTCAATGCGTCGGGCTTTTGATGGCTc > 1:8355952/1‑35 (MQ=1) aaGATCCTCAATGCGTCGGGGTTTTTACAGCCccc > 1:13346352/1‑34 (MQ=0) aaGATCCTCAATGCGTCGGGCTTTTTTTAGCTccc > 1:8249551/1‑34 (MQ=0) aGATCCTCAATGCGTCGGGCTTTTTACCGGTccca > 1:11625519/1‑33 (MQ=0) aGATCCTCAATGCGTCGGGCTTTTTACAGCCccca > 1:5282124/1‑33 (MQ=1) ccTCAATGCGTCGGGCTTTTTACAGCTCCCAAGCt > 1:10627961/1‑35 (MQ=0) cTCAATGCGTCGGGCTTTTTACAGCTCCAAAGccg > 1:7080431/1‑33 (MQ=1) | CTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTG > REL606/2775380‑2775430 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |