Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL606864,0690T→G100.0% 12.7 17V184G (GTG→GGG) yliCpredicted peptide transporter subunit: membrane component of ABC superfamily
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (11/0):  ref base (1/5):  total (12/5)
Fisher's exact test strand distribution p-value = 9.70e-04
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00

TACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCG  >  REL606/864035‑864103
                                  |                                  
tACATTTTACCCTCCCTGACGCTCGGCGCGGCAGt                                    <  1:16144299/35‑1 (MQ=255)
 aCATTTTACCCTCCCTGACGCTCGGCGCGGCAGTg                                   <  1:758100/35‑1 (MQ=255)
 aCATTTTACCCTCCCTGACGCTCGGCGCGGCAGTg                                   <  1:9461080/35‑1 (MQ=255)
 aCATTTTACCCTCCCTGACGCTCGGCGCGGCAGTg                                   <  1:18579117/35‑1 (MQ=255)
  cATTTTACCCTCCCCGACGCTCGGCGCGGCAGGgg                                  >  1:157771/1‑35 (MQ=37)
   aTTTTACCCTCCCTGACGCTCGGCGCGGCAGGggg                                 >  1:5404701/1‑34 (MQ=255)
   aTTTTACCCTCCCTGACGCTCGGCGCGGCAGGggg                                 >  1:9884799/1‑34 (MQ=255)
    ttttACCCTCCCTGACGCTCGGCGCGGCAGGgggc                                >  1:6394385/1‑33 (MQ=37)
    ttttACCCTCCCTGACGCTCGGCGCGGCAGGgggc                                >  1:16898235/1‑33 (MQ=37)
    ttttACCCTCCCTGACGCTCGGCGCGGCAGGGgcg                                >  1:10952454/1‑34 (MQ=255)
    ttttACCATCCCTGACGCTCGGCGCGGCAGTGgcc                                <  1:1276403/35‑1 (MQ=255)
     tttCCCCCCCCTGACGCTCGGCGCGGCAGTGgccg                               <  1:709797/35‑1 (MQ=37)
     tttACCCTCCCTGACGCTCGGCGCGGCAGGGggcg                               >  1:7326549/1‑35 (MQ=37)
     tttACCCTCCCTGACGCTCGGCGCGGCAGGGggcg                               >  1:5122166/1‑35 (MQ=37)
     tttACCCTCCCTGACGCTCGGCGCGGCAGGGggcg                               >  1:4219233/1‑35 (MQ=37)
      ttACCCTCCCTGACGCTCGGCGCGGCAGGGggcgg                              >  1:10896044/1‑34 (MQ=25)
       tACCCTCCCTGACGCTCGGCGCGGCAGGGggcgcg                             >  1:18781370/1‑34 (MQ=25)
        aCCCTCCCTGACGCTCGGCGCGGCAGGGggcgggc                            >  1:15732436/1‑32 (MQ=25)
          cctccctGACGCTCGGCGCGGCAGGGggcgcccgg                          >  1:6130742/1‑32 (MQ=25)
          cctccctGACGCTCGGCGCGGCAGGGGgcgccggg                          >  1:3025288/1‑33 (MQ=25)
           ctccctGACGCTCGGCGCTGCAGTGGccggcgggg                         >  1:1067847/1‑32 (MQ=21)
                     cggggCGCGGCGGGGCCCGCCGTGATGGCGCGCtt               <  1:16048931/32‑1 (MQ=19)
                          cgcgGCGGGGCCCGCCGTGATGGCGCGCTTTAccc          <  1:11999410/35‑1 (MQ=21)
                            gggCAGTGCCCGCCGTGATGGCGCGCTTTACCcgc        <  1:997639/34‑1 (MQ=255)
                             ggCAGCGCCCGCCGTGATGGCGCGCTTTACCcgcg       <  1:2220750/35‑1 (MQ=25)
                                aGTGCCCGCCGTGATGGCGCGCTTTACCCGCGcgt    <  1:7234584/35‑1 (MQ=255)
                                  tGGCCGCCGTGATGGCGCGCTTTACCCGCGcgtcg  >  1:10129760/1‑35 (MQ=255)
                                  |                                  
TACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCG  >  REL606/864035‑864103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.