New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 957480 = | 61 (0.590) | 11 (0.150) | 3/34 | NT | 20.1% | coding (960/1293 nt) | serS | seryl‑tRNA synthetase |
? | REL606 | = 3467034 | 44 (0.600) | coding (963/2319 nt) | yhgF | predicted transcriptional accessory protein |
Only 100 of 125 total aligned reads displayed.
TTGCCCGTAACCTGCACGATCTGCTGATGGCGGCCCCTGCCGGACTGCGTGCAACGATGGGCCTCGATC > REL606/3467000‑3467068 | ttGCCCGTAACCTGCACGATCTGCTGATGGCGGcc < 1:9042997/35‑1 (MQ=255) tGCCCGTAACCTGCACGATCTGCTGATGGCGGCCc > 1:2577508‑M2/1‑34 (MQ=255) tGCCCGTAACCTGCACGATCTGCTGATGGCGGCCc > 1:13562236‑M2/1‑34 (MQ=255) tGCCCGTAACCTGCACGATCTGCTGATGGCGGCCc > 1:16508302‑M2/1‑34 (MQ=255) tGCCCGTAACCTGCACGATCTGCTGATGGCGGCCc > 1:6481313‑M2/1‑34 (MQ=255) gCCCGTAACCTGCACGATCTGCTGATGGCGGGCcc < 1:4236281‑M2/35‑3 (MQ=255) gCCCGTAACCTGCACGATCTGCTGATGGCGGCCcc > 1:9609551‑M2/1‑33 (MQ=255) gCCCGTAACCTGCACGATCTGCTGATGGCGGCCcc > 1:6677603‑M2/1‑33 (MQ=255) gCCCGTAACCTGCACGATCTGCTGATGGCGGCCcc < 1:13640429‑M2/35‑3 (MQ=255) cccGTAACCTGCACGATCTGCTGATGGCGGGCccc < 1:15405036‑M2/35‑4 (MQ=255) cccGTAACCTGCACGATCTGCTGATGGCGGGCccc < 1:10090166‑M2/35‑4 (MQ=255) cccGTAACCTGCACGATCTGCTGATGGCGGCCcct > 1:19872111‑M2/1‑32 (MQ=255) cccGTAACCTGCACGATCTGCTGATGGCGGCCcct > 1:16760381‑M2/1‑32 (MQ=255) cccGTAACCTGCACGATATGCTGATGGCGGCCcct > 1:13031986‑M2/1‑32 (MQ=255) ccGTAACCTGCACGATCTGCTGATGGCGGCCcctg > 1:14336147‑M2/1‑31 (MQ=255) ccGTAACCTGCACGATCTGCTGATGGCGGCCcccg < 1:7678820‑M2/35‑5 (MQ=255) cagtaACCTGCACGATCTGCTGATGGCGGCCcctg > 1:14346288‑M2/3‑31 (MQ=255) cGTAACCTGCACGATCTGCTGATGGCGGGCCCCGc > 1:4923762/1‑35 (MQ=25) cGTAACCTGCACGATCTGCTGATGGCGGCCcctgc > 1:10571451‑M2/1‑30 (MQ=255) gTAACCTGCACGATCTGCTGATGGCGGCCcctgcc > 1:16572623‑M2/1‑29 (MQ=255) tAACCTGCACGATCTTCTGATGGCGGCCCCCGCCg > 1:11781502/1‑35 (MQ=37) tAACCTGCACGATCTGCTGATGGCGGCCcctgccg > 1:5656658‑M2/1‑28 (MQ=255) acccTGCACGATCTGCTGATGGCGGCCCCTGCCgg < 1:1244506/33‑1 (MQ=255) aaCCTGCACGATCTGCTGATGGCGGGCCCCCCCgg > 1:2230426/1‑35 (MQ=25) aaCCTGCACGATCTGCTGATGGCGGCCCCTGCCgg < 1:4907650/35‑1 (MQ=255) aaCCTGCACGATCTGATGATGGCGGCCCCTGCCgg < 1:17358494/35‑1 (MQ=255) aCCTGCACGATCTGCTGATGGCGGCCCCTGCCGGa < 1:10004588/35‑1 (MQ=255) aCCTGCACGATCTGCTGATGGCGGCCCCTGCCGGa < 1:11154521/35‑1 (MQ=255) ccTGCACGATCTGCTGATGGCGGGCCCCCCCgggc > 1:11949202/1‑33 (MQ=21) ccTGCACGATCTGCTGATGGCGGCGCCTGCCGGAc < 1:20024088/35‑1 (MQ=255) cTGCACGATCTGCTGATGGCGGGCCCCGCCgggcc > 1:11190445/1‑32 (MQ=25) cTGCACGATCTGCTGATGGCGGGCCCCGCCGGGCt > 1:12354948/1‑35 (MQ=25) cTGCACGATCTGCTGATGGCGGCCCCTGCCGGACt < 1:10854341/35‑1 (MQ=255) cTGCACGATCTGCTGATGGCGGCCCCTGCCGGACt < 1:460306/35‑1 (MQ=255) cTGCACGATCTGCTGATGGCGGCCCCTGCCGGACt < 1:17119513/35‑1 (MQ=255) cACGTTCTGCTGATGGCGGCCCCTGCCGGACTGCg < 1:2829672/35‑1 (MQ=255) aCGATCTGCTGATGGCGGGCCCCCCCGGACCGCgg > 1:7372884/1‑34 (MQ=16) cGATCTGCTGATGGCGGCCCCTGCCGGACTGCGTg < 1:6871948/35‑1 (MQ=255) cGATCTGCTGATGGCGGCCCCTGCCGGACTGCGTg < 1:3051191/35‑1 (MQ=255) cGATCTGCTGATGGCGGCCCCTGCCGGACTGCGTg < 1:7510640/35‑1 (MQ=255) cGATCTGCTGATGGCGGCCCCTGCCGGACTGCGTg < 1:15879188/35‑1 (MQ=255) cGATCTGCTGATGGCGGCCCCTGCCGGACTGCGTg < 1:11326866/35‑1 (MQ=255) cGATCTGCTGATGGCGGCCCCTGCCGGACTGCGTg < 1:6074591/35‑1 (MQ=255) cGATCTGCTGAGGGCGGCCCCTGCCGGACTGCGTg < 1:3177649/35‑1 (MQ=255) gttCTCCTGATGGCGGCCCCTGCCGGACTGCGTGc < 1:18195406/33‑1 (MQ=38) gATCTGCTGATGGCGGGCCCTGCCGGCACGCGTGc > 1:672276/1‑35 (MQ=16) gATCTGCTGATGGCGGCCCCTGCCGGACTGCGTGc < 1:7880594/35‑1 (MQ=255) aTCTGCTGATGGCGGCCCCTGCCGGACTGCGTGCa < 1:13382494/35‑1 (MQ=255) aTCTGCTGATGGCGGCCCCTGCCGGACTGCGTGCa < 1:16021435/35‑1 (MQ=255) aTCTGCTGATGGCGGCCCCTGCCGGACTGCGTGCa < 1:20297772/35‑1 (MQ=255) aTCTGCGGATGGCGGCCCCTGCCGGACTGCGTGCa < 1:10849890/35‑1 (MQ=255) tCTGCTGATGGCGGCCCCTGCCGGACTGCGTGCaa < 1:18028520/35‑1 (MQ=255) tCTGCTGAGGGCGGCCCCTGCCGGACTGCGTGCaa < 1:17839232/35‑1 (MQ=255) ctgctgATGGCGGCCCCTGCCGGACTGCGTGCAAc < 1:9159039/35‑1 (MQ=255) ctgcggATGGCGGCCCCTGCCGGACTGCGTGCAAc < 1:9024268/35‑1 (MQ=255) ctgcggATGGCGGCCCCTGCCGGACTGCGTGCAAc < 1:10851616/35‑1 (MQ=255) ctgcggATGGCGGCCCCTGCCGGACTGCGTGCAAc < 1:20008644/35‑1 (MQ=255) cggctgATGGCGGCCCCTGCCGGACTGCGTGCAAc < 1:7425459/33‑1 (MQ=255) cgcctgAGGGCGCCCCCTGCCGGACTGCGTGCAAc < 1:8664957/32‑1 (MQ=25) tgctgATGGCGGCCCCTGCCGGACTGCGTGCAACg < 1:9768542/35‑1 (MQ=255) tgcggATGGCGGCCCCTGCCGGACTGCGTGCAACg < 1:3928668/35‑1 (MQ=255) ggctgAGGGCGGCCCCTGCCGGACTGCGTGCAACg < 1:6467160/34‑1 (MQ=255) gctgATGGCGGCCCCTGCCGGACTGCGTGCAACGa < 1:15791600/35‑1 (MQ=255) ctgATGGCGGCCCCTGCCGGACTGCGTGCAACGAt < 1:11664156/35‑1 (MQ=255) ctgATGGCGGCCCCTGCAGGACTGCGTGCAACGAt < 1:7966072/35‑1 (MQ=255) tgATGGCGGCCCCTGCCGGACTGCGTGCAACGATg < 1:3683485/35‑1 (MQ=255) gATGGCGGCCCCTGCCGGACTGCGTGCAACGATgg < 1:5021371/35‑1 (MQ=255) aaTGGCGCCCCCTGCCGGACTGCGTGCAACGATgg < 1:9149211/34‑1 (MQ=255) gtgGGGGCCcctgccgtaccgtaaaatcatccttt > 1:1087860‑M2/2‑9 (MQ=255) tGGCGGCCcctgccgtaccgtaaaatcatcctttg > 1:574800‑M2/1‑8 (MQ=255) tGGCGGCCcctgccgtaccgtaaaatcatcctttg > 1:808803‑M2/1‑8 (MQ=255) tGGCGGCCCCTGCCGGACTGCGTGCAACGATGGGc < 1:11365329/35‑1 (MQ=255) tgcggcccctgccgtaccgtaaaatcatcctttgc > 1:5943146‑M2/2‑7 (MQ=255) ggcggcCcctgccgtaccgtaaaatcatcctttgc > 1:5596180‑M2/1‑7 (MQ=255) ggcggcCCCTGCCGGACTGCGTGCAACGATGGGcc < 1:15425666/35‑1 (MQ=255) ggcggcCCCTGCCGGACTGCGTGCAACGATGGGcc < 1:10542061/35‑1 (MQ=255) gccggcCCCTGCCGGACTGCGTGCAACGATGGGcc < 1:15757977/33‑1 (MQ=255) gctgcCcctgccgtaccgtaaaatcatcctttgca > 1:5439144‑M2/1‑6 (MQ=255) gcggcCcctgccgtaccgtaaaatcatcctttgca > 1:11646770‑M2/1‑6 (MQ=255) gcggcCCATGCCGGACTGCGTGCAACGATGGGCCt < 1:19106166/35‑1 (MQ=255) gggcCCCTGCCGGACTGCGTGCAACGATGGGCCTc < 1:14604883/34‑1 (MQ=255) cggcCCCTGCCGGACTGCGTGCAACGATGGGCCTc < 1:983739/35‑1 (MQ=255) ccgcccctgccgtaccgtaaaatcatcctttgcac > 1:19889566‑M2/3‑5 (MQ=255) ggcCcctgccgtaccgtaaaataatcctttgcact > 1:2268640‑M2/1‑4 (MQ=255) ggcCCCTGCCGGACTGCGTGCAACGATGGTCCTCg > 1:18142809/1‑35 (MQ=255) ggcCCCTGCCGGACTGCGTGCAACGATGGGCCTCg > 1:9751745/1‑35 (MQ=255) ggcCCCTGCCGGACTGCGTGCAACGATGGGCCTCg > 1:2557442/1‑35 (MQ=255) ggcCCCTGCCGGACTGCGTGCAACGATGGGCCTCg > 1:19026089/1‑35 (MQ=255) ggcCCCTGCCGGACTGCGTGCAACGATGGGCCTCg > 1:6405577/1‑35 (MQ=255) ggcCCCTGCCGGACTGCGTGCAACGATGGGCCCCg > 1:20344906/1‑35 (MQ=255) ggccctgccgtaccgtaaaatcatcctttgcactg > 1:4567363‑M2/3‑3 (MQ=255) gcCcctgccgtaccgtaaaatcatcctttgcactg > 1:14960093‑M2/1‑3 (MQ=255) gcCcctgccgtaccgtaaaatcatactttgcactg > 1:2389180‑M2/1‑3 (MQ=255) gcCCCTGCCGGACTGCGTGCAACGATGGGCCTCGa > 1:4960784/1‑35 (MQ=255) gcCCCTGCCGGACTGCGTGCAACGATGGGCCTCGa > 1:17694143/1‑35 (MQ=255) gccctgccgtacagtaaaatcatcctttgcactgg > 1:17430073‑M2/2‑2 (MQ=255) cccctgccgtaccgtaaaatcatcctttgcactgg > 1:18929419‑M2/1‑2 (MQ=255) ccctgccgtaccgtaaaatcatcctttgcactggc > 1:3469077‑M2/1‑1 (MQ=255) cccTGCCGGACTGCGTGCAACGATGGGCCTCGATc < 1:1939368/35‑1 (MQ=255) cccTGCCGGACTGCGTGCAACGATGGGCCTCGATc < 1:16754963/35‑1 (MQ=255) | TTGCCCGTAACCTGCACGATCTGCTGATGGCGGCCCCTGCCGGACTGCGTGCAACGATGGGCCTCGATC > REL606/3467000‑3467068 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |