New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 875814 = | 63 (0.610) | 19 (0.220) | 5/40 | NT | 23.4% | coding (127/597 nt) | ybjG | undecaprenyl pyrophosphate phosphatase |
? | REL606 | = 3285418 | 72 (0.840) | coding (277/654 nt) | yhbL | isoprenoid biosynthesis protein with amidotransferase‑like domain |
Only 100 of 142 total aligned reads displayed.
CGTTGTGCTGTAAGCCCCCACAACCAAAGTACCACGGCCAGCAACGGCACCACGGTAATCAAATCTTTA > REL606/875780‑875848 | cGTTGTGCTGTAAGCCCCCACAACCAAAGTACCAc > 1:2172817/1‑35 (MQ=255) cGTTGTGCTGTAAGCCCCCACAACCAAAGTACCAc > 1:7036486/1‑35 (MQ=255) cGTTGTGCTGTAAGCCCCCACAACCAAAGTACCAc > 1:12615504/1‑35 (MQ=255) aattgcttaaattcttcgccgcgccaaaccccccc < 1:4694345‑M1/1‑1 (MQ=255) aattgcttaaattcttcgccgcgccaaaccccccc > 1:10988355‑M1/35‑35 (MQ=255) gTTGTGCTGTAAGCCCCCACAACCAAAGTACCACg < 1:10471179/35‑1 (MQ=255) gTTGTGCTGTAAGCCCCCACAACCAAAGTACCACg > 1:16496831/1‑35 (MQ=255) gTTGTGCTGTAAGCCCCCACAACCAAAGTACCACg < 1:15152728/35‑1 (MQ=255) gTTGTGCTGTAAGCCCCCACAACCAAAGTACCACg > 1:11997101/1‑35 (MQ=255) attgcttaaattcttcgccgcgccaaaccccccCg > 1:18066657‑M1/34‑35 (MQ=255) attgcttaaattcttcgccgcgccaaaccccccCg < 1:14826452‑M1/2‑1 (MQ=255) attgcttaaattcttcgccgcgccaaaccccccCg < 1:7164230‑M1/2‑1 (MQ=255) ttgcttaaattcttcgccgcgccaaaccccccCgg > 1:3098342‑M1/33‑35 (MQ=255) ttgcttaaattcttcgccgcgccaaaccccccCgg < 1:2216517‑M1/3‑1 (MQ=255) ttgcttaaattcttcgccgcgccaaaccccacCgg > 1:7615931‑M1/33‑35 (MQ=255) ttGTGCTGTAAGCCCCCACAACCAAAGTACCACgg > 1:1342683/1‑35 (MQ=255) ttGTGCTGTAAGCCCCCACAACCAAAGTACCACgg > 1:7124342/1‑35 (MQ=255) ttGTGCTGTAAGCCCCCACAACCAAAGTACCACgg > 1:20229692/1‑35 (MQ=255) tgtgCTGTAAGCCCCCACAACCAAAGTACCACGGc > 1:19162172/1‑35 (MQ=255) tgcttaaattcttcgccgcgccaaaccccccCGGc < 1:3122640‑M1/4‑1 (MQ=255) tgcttaaattcttcgccgcgccaaaccccccCGGc < 1:11895661‑M1/4‑1 (MQ=255) tgcttaaattcttcgccgcgacaaaccccccCGGc > 1:14664523‑M1/32‑35 (MQ=255) gtgCTGTAAGCCCCCACAACCAAAGTACCACGGcc > 1:3990772/1‑35 (MQ=255) gtgCTGTAAGCCCCCACAACCAAAGTACCACGGcc > 1:7840421/1‑35 (MQ=255) gtgCTGTAAGCCCCCACAACCAAAGTACCACGGcc > 1:16437992/1‑35 (MQ=255) tgCTGTAAGCCCCCACAACCAAAGTACCACGGCCa > 1:4636018/1‑35 (MQ=255) tgCTGTAAGCCCCCACAACCAAAGTACCACGGCCa > 1:11164942/1‑35 (MQ=255) gCTGTAAGCCCCCACAACCAAAGTACCACGGCCAg > 1:20068885/1‑35 (MQ=255) cTGTAAGCCCCCACAACCAAAGTACCACGGCCAGc > 1:58706/1‑35 (MQ=255) cTGTAAGCCCCCACAACCAAAGTACCACGGCCAGc > 1:5420410/1‑35 (MQ=255) cTGTAAGCCCCCACAACCAAAGTACCACGGCCAGc > 1:9744079/1‑35 (MQ=255) cTGTAAGCCCCCACAACCAAAGTACCACGGCCAGc > 1:8675102/1‑35 (MQ=255) cTGTAAGCCCCCACAACCAAAGTACCACGGCCAGc > 1:2934997/1‑35 (MQ=255) gTAAGCCCCCACAACCAAAGTACCACGGCCAGCaa > 1:13371120/1‑35 (MQ=255) gTAAGCCCCCACAACCAAAGTACCACGGCCAGCaa > 1:5093682/1‑35 (MQ=255) tAAGCCCCCACAACCAAAGTACCACGGCCAGCAAc > 1:6009034/1‑35 (MQ=255) aGCCCCCACAACCAAAGTACCACGGCCAGCAACgg > 1:5280246/1‑35 (MQ=255) aGCCCCCACAACCAAAGTACCACGGCCAGCAACgg > 1:16769741/1‑35 (MQ=255) cccccACAACCAAAGTACCACGGCCAGCAACGGca > 1:16861647/1‑35 (MQ=255) ccccACAACCAAAGTACCACGGCCAGCAACGGcac > 1:10743557/1‑35 (MQ=255) ccccACAACCAAAGTACCACGGCCAGCAACGGcac > 1:18547431/1‑35 (MQ=255) ccccACAACCAAAGTACCACGGCCAGCAACGGcac > 1:4572307/1‑35 (MQ=255) ccACAACCAAAGTACCACGGCCAGCAACGGcacca > 1:8381951/1‑35 (MQ=255) ccAAAACCAAACCCCCCCGGCCAGCAACGGcacca < 1:9428451/35‑1 (MQ=12) cacaACCAAAGTACCACGGCCAGCAACGGcaccac > 1:18033254/1‑35 (MQ=255) cacaACCAAAGTACCACGGCCAGCAACGGcaccac > 1:5295891/1‑35 (MQ=255) acaACCAAAGTACCACGGCCAGCAACGGCACCACg > 1:10646598/1‑35 (MQ=255) ccaccaaaccccccCGGCCAGCAACGGCACCACgg > 1:15312708‑M1/15‑35 (MQ=255) caACCAAAGTACCACTGCCAGCAACGGCACCACgg > 1:8990102/1‑35 (MQ=255) caACCAAAGTACCACGGCCAGCAACTGCACCACgg > 1:9540650/1‑35 (MQ=255) caACCAAAGTACCACGGCCAGCAACGGCACCACgg > 1:17665717/1‑35 (MQ=255) aaCCAAAGTACCACGGCCAGCAACGGCACCACGGt > 1:5364015/1‑35 (MQ=255) aaCCAAAGTACCACGGCCAGCAACGGCACCACGGt > 1:9890308/1‑35 (MQ=255) aaCCAAAGTACCACGGCCAGCAACGGCACCACGGt > 1:10317043/1‑35 (MQ=255) aaCCAAAGTACCACGGCCAGCAACGGCACCACGGt > 1:14238148/1‑35 (MQ=255) aaCCAAAGTACCACGGCCAGCAACGGCACCACGGt > 1:16195372/1‑35 (MQ=255) aCCAAAGTACCACGGCCAGCAACGGCACCACGGTa > 1:7345869/1‑35 (MQ=255) aCCAAAGTACCACGGCCAGCAACGGCACCACGGTa > 1:19370732/1‑35 (MQ=255) aCCAAAGTACCACGGCCAGCAACGGCACCACGGTa > 1:8092752/1‑35 (MQ=255) ccAAAGTACCACGGCCAGCAACGGCACCACGGTaa > 1:8470995/1‑35 (MQ=255) caaaccccccCGGCCAGCAACGGCACCACGGTAAt > 1:9442202‑M1/11‑35 (MQ=255) cAAAGTACCACGGCCAGCAACGGCACCACGGTAAt > 1:14505773/1‑35 (MQ=255) cAAAGTACCACGGCCAGCAACGGCACCACGGTAAt > 1:13867777/1‑35 (MQ=255) cAAAGTACCACGGCCAGCAACGGCACCACGGTAAt > 1:19582941/1‑35 (MQ=255) aaaaccccccCGGCCAGCAACGGCACCACGGTAAt > 1:18119420‑M1/11‑35 (MQ=255) aaaccccccCGGCCAGCAACGGCACCACGGTAATc > 1:7648009‑M1/10‑35 (MQ=255) aaaccccccCGGCCAGCAACGGCACCACGGTAATc > 1:15285841‑M1/10‑35 (MQ=255) aaaccccccCGGCCAGCAACGGCACCACGGTAATc > 1:14925027‑M1/10‑35 (MQ=255) aaaGTACCACGGCCAGCAACGGCACCACGGTAATc > 1:6373049/1‑35 (MQ=255) aagcccccCGGCCAGCAACGGCACCACGGTAATCa > 1:9494065‑M1/9‑35 (MQ=255) aaccccccCGGCCAGCAACGGCACCACGGTAATCa > 1:7997012‑M1/9‑35 (MQ=255) aaGTCCCCCGGCCAGAAACGGCACCACGGTAATCa < 1:18616381/35‑1 (MQ=21) aaGTCCCCCGGCCAGAAACGGCACCACGGTAATCa < 1:3551828/35‑1 (MQ=21) aaGTACCACGGCCAGCAACGGCACCACGGTAATCa > 1:19168450/1‑35 (MQ=255) aaGTACCACGGCCAGCAACGGCACCACGGTAATCa > 1:13259106/1‑35 (MQ=255) aaGTACCACGGCCAGCAACGGCACCACGGTAATCa > 1:8935574/1‑35 (MQ=255) aaGTACCACGGCCAGCAACGGCACCACGGTAATCa > 1:19573303/1‑35 (MQ=255) accccccCGGCCAGCAACGGCACCACGGTAATCaa > 1:4140564‑M1/8‑35 (MQ=255) aGTACCACGGCCAGCAACGGCACCACGGTAATCaa > 1:13670977/1‑35 (MQ=255) aGTACCACGGCCAGCAACGGCACCACGGTAATCaa > 1:629437/1‑35 (MQ=255) gTACCACGGCCAGCAACGGCACCACGGTAATCaaa > 1:6775802/1‑35 (MQ=255) ccccccCGGCCAGCAACGGCACCACGGTAATCaaa > 1:18380023‑M1/7‑35 (MQ=255) ccccccCGGCCAGCAACGGCACCACGGTAATCaaa > 1:2777538‑M1/7‑35 (MQ=255) tACCACGGCCAGCAACGGCACCACGGTAATCAAAt > 1:5893187/1‑35 (MQ=255) tACCACGGCCAGCAACGGCACCACGGTAATCAAAt > 1:11545320/1‑35 (MQ=255) cccccCGGCCAGCAACGGCACCACGGTAATCAAAt > 1:12745906‑M1/6‑35 (MQ=255) cccccCGGCCAGCAACGGCACCACGGTAATCAAAt > 1:4932315‑M1/6‑35 (MQ=255) ccccCGGCCAGCAACGGCACGACGGTAATCAAATc > 1:3450289‑M1/5‑35 (MQ=255) ccccCGGCCAGCAACGGCACCACGGTAATCAAATc > 1:15772664‑M1/5‑35 (MQ=255) ccccCGGCCAGCAACGGCACCACGGTAATCAAATc > 1:20580219‑M1/5‑35 (MQ=255) aCCACGGCCAGCAACGGCACCACGGTAATCAAATc > 1:4496264/1‑35 (MQ=255) cccCGGCCAGCAACGGCACCACGGTAATCAAATCt > 1:16904344‑M1/4‑35 (MQ=255) ccACGGCCAGCAACGGCACCACGGTAATCAAATCt > 1:2405064/1‑35 (MQ=255) ccCGGCCAGCAACGGCACCACGGTAATCAAATCtt > 1:17528159‑M1/3‑35 (MQ=255) ccCGGCCAGCAACGGCACCACGGTAATAAAATCtt > 1:14217126‑M1/3‑35 (MQ=255) cACGGCCAGCAACGGCACCACTGTAATCAAATCtt > 1:6057444/1‑35 (MQ=255) cACGGCCAGCAACGGCACCACGGTAATCAAATCtt > 1:13730408/1‑35 (MQ=255) CGGCCAGCAACGGCACCACGGTAATCAAATCTTTa < 1:5960085‑M1/35‑1 (MQ=255) CGGCCAGCAACGGCACCACGGTAATCAAATCTTTa > 1:11555470‑M1/1‑35 (MQ=255) CGGCCAGCAACGGCACCACGGTAATCAAATCTTTa > 1:18792216‑M1/1‑35 (MQ=255) | CGTTGTGCTGTAAGCCCCCACAACCAAAGTACCACGGCCAGCAACGGCACCACGGTAATCAAATCTTTA > REL606/875780‑875848 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |