New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3780471 = | 81 (0.790) | 7 (0.120) | 4/28 | NT | 14.0% | coding (503/1359 nt) | ECB_03520 | conserved hypothetical protein |
? | REL606 | = 4600662 | 39 (0.650) | coding (33/606 nt) | osmY | periplasmic protein |
Only 100 of 114 total aligned reads displayed.
AGCATTGCACCGATAGAAAAACCGACACCCGCCCAGCCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3780513‑3780471 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccagcagAGTTTTCGAAATCTTCAGTCTTGTCATAGTCATC < REL606/4600662‑4600629 AGCATTGCCCCGATAGAAAAACCGACACCCGCCCA < 1:12338103/35‑1 AGCATTGCACCGATAGAAAAACCGACACCCGCCCA > 1:1012015/1‑35 GCATTGCACCTATAGAAAAACCGACACCCGCCCAG > 1:2197316/1‑35 GCATTGCACCGATAGAAAAACCGACACCCGCCCAG > 1:19011788/1‑35 GCATTGCACCGATAGAAAAACCGACACCCGCCCAG > 1:4704354/1‑35 CATTGCACCGATAGAAAAACCGACACCCGCCCAGC > 1:7314278/1‑35 CATTGCACCGATAGAAAAACCGACACCCGCCCAGC > 1:13250582/1‑35 CATTGCACCGATAGAAAAACCGACACCCGCCCAGC > 1:12363155/1‑35 ATTGCACCGATAGAAAAACCGACACCCGCCCAGCC > 1:3503572/1‑35 ATTGCACCGATAGAAAAACCGACACCCGCCCAGCC > 1:17384636/1‑35 ATTGCACCGATAGAAAAACCGACACCCGCCCAGCC > 1:14742975/1‑35 TGCACCGATAGAAAAACCGACACCCGCCCAGCCAG > 1:16041444/1‑35 CACCGATAGAAAAACCGACACCCGCCCAGCCAGCA > 1:13811252/1‑35 ACCGATAGAAAAACCGACACCCGCCCAGCCAGCAG > 1:4115731/1‑35 ACCGATAGAAAAACCGACACCCGCCCAGCCAGCAG > 1:10180248/1‑35 ACACCCCCCCAGCCAGCAGAGTTTTCGAAATCTTC < 1:3101271/35‑1 CACCCCCCCAGCCAGCAGAGTTTTCGAAATCTTCA < 1:5795042/35‑1 ACCCCCCCAGCCAGCAGAGTTTTCGAAATCTTCAG < 1:7036776/35‑1 ACCCCCCCAGCCAGCAGAGTTTTCGAAATCTTCAG < 1:13646117/35‑1 CCCTCCCAGCCAGCAGAGTTTTCGAAATCTTCAGT < 1:2795779/35‑1 CCCCCCCAGCCAGCAGAGTTTTCGAAATCTTCAGT < 1:1232390/35‑1 CCCCCCCAGCCAGCAGAGTTTTCGAAATCTTCAGT < 1:17057088/35‑1 cccCCCAGCCAGCAGAGTTTTCGAAATCTTCAGTC < 1:17187510/32‑1 cacCCCAGCCAGCAGAGTTTTCGAAATCTTCAGTC < 1:7533890/32‑1 ccCCCAGCCAGCAGAGTTTTCGAAATCTTCAGTCT < 1:4682437/33‑1 tCCCAGCCAGCAGAGTTTTCGAAATCTTCAGTCTT < 1:13042625/34‑1 cCCCAGCCAGCAGAGTTTTCGAAATCTTCAGTCTT < 1:18277884/34‑1 cCCCAGCCAGCAGAGTTTTCGAAATCTTCAGTCTT < 1:15984954/34‑1 cCCCAGCCAGCAGAGTTTTCGAAATCTTCAGTCTT < 1:14076015/34‑1 cCCCAGCCAGCAGAGTTTTCGAAATCTTCAGTCTT < 1:12403167/34‑1 CCCAGCCAGCAGAGTTTTCGAAATCTTCAGTCTTG < 1:1064342/35‑1 CCCAGCCAGCAGAGTTTTCGAAATCTTCAGTCTTG < 1:16103941/35‑1 CCAGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGT < 1:8659950/35‑1 CCAGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGT < 1:14388216/35‑1 CCAGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGT < 1:6886282/35‑1 CCAGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGT < 1:4027112/35‑1 CCAGCCAGCAGAGTTTTCGAAATCTTCAGTATTGT < 1:12195037/35‑1 CAGCCAGCAGAGTTTTCGAAGTCTTCAGTCTTGTC < 1:15973394/35‑1 CAGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTC < 1:11814685/35‑1 CAGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTC > 1:18291154/1‑35 CAGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTC < 1:18243772/35‑1 CAGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTC < 1:12812419/35‑1 CAGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTC > 1:15333603/1‑35 CAGCCAGCAGAGTTTTCGAAATCTTCAGTCCTGTC > 1:3899591/1‑35 CAGCCAGCAGAGTTTTCGAAAGCTTCAGTCTTGTC < 1:2475813/35‑1 AGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCA > 1:19103222/1‑35 AGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCA > 1:3802193/1‑35 AGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCA < 1:8048150/35‑1 AGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCA < 1:9357111/35‑1 AGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCA < 1:12328112/35‑1 AGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCA > 1:10417800/1‑35 AGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCA > 1:15993667/1‑35 AGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCA > 1:6005318/1‑35 AGCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCA > 1:15645152/1‑35 GCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCAT < 1:5693635/35‑1 GCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCAT > 1:10811749/1‑35 GCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCAT < 1:19901730/35‑1 GCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCAT < 1:6115850/35‑1 GCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCAT < 1:2440542/35‑1 GCCAGCAGAGTTTTCGAAATCTTCAGTCTTGTAAT < 1:3003850/35‑1 CCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATA < 1:4225400/35‑1 CCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATA > 1:5745571/1‑35 CCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATA > 1:20396105/1‑35 CCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATA > 1:13454011/1‑35 CCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATA < 1:19068818/35‑1 CCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATA > 1:1832209/1‑35 CCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATA < 1:16851481/35‑1 CCAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATA > 1:17503288/1‑35 CCAGCAGAGTTTTCGAAATCTTAAGTCTTGTCATA < 1:4135947/35‑1 CAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAG < 1:10498160/35‑1 CAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAG < 1:20255057/35‑1 CAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAG > 1:8515940/1‑35 CAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAG < 1:8379883/35‑1 CAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAG > 1:19300147/1‑35 CAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAG > 1:16604637/1‑35 CAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAG > 1:56710/1‑35 CAGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAG > 1:5030870/1‑35 CAGCAGAGTTTTCGAAATCTTCAATCTTGTCATAG > 1:9426167/1‑35 AGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAGT > 1:10489450/1‑35 AGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAGT < 1:3572471/35‑1 AGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAGT < 1:13866748/35‑1 AGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAGT < 1:15095336/35‑1 AGCAGAGTTTTCGAAATCTTCAGTCTTGTCATAGT > 1:511890/1‑35 GCAGAGTTTTCGAAATCTTCAGTCTTGTCATAGTC < 1:15705951/35‑1 GCAGAGTTTTCGAAATCTTCAGTCTTGTCATAGTC > 1:20292635/1‑35 GCAGAGTTTTCGAAATCTTCAGTCTTGTCATAGTC < 1:844288/35‑1 CAGAGTTTTCGAAATCTTCAGTCTTGTCATAGTCA > 1:20405193/1‑35 CAGAGTTTTCGAAATCTTCAGTCTTGTCATAGTCA > 1:11232203/1‑35 CAGAGTTTTCGAAATCTTCAGTCTTGTCATAGTCA > 1:1273861/1‑35 CAGAGTTTTCGAAATCTTCAGTCTTGTCATAGTCA > 1:6655843/1‑35 CAGAGTTTTCGAAATCTTCAGTCTTGTCATAGTCA > 1:18253853/1‑35 AGAGTTTTCGAAATCTTCAGTCTTGTCATAGTCAT > 1:18022211/1‑35 AGAGTTTTCGAAATCTTCAGTCTTGTCATAGTCAT < 1:1325700/35‑1 AGAGTTTTCGAAATCTTCAGTCTTGTCATAGTCAT < 1:17289871/35‑1 AGAGTTTTCGAAATCTTCAGTCTTGTCATAGTCAT < 1:7969452/35‑1 AGAGTTTTCGAAATCTTCAGTCTTGTCATAGTCAT > 1:6659907/1‑35 AGAGTTTTCGAAATCTTCAGTCTTGTCATAGTCAT > 1:606854/1‑35 GAGTTTTCGAAATCTTCAGTCTTGTCATAGTCATC < 1:19455258/35‑1 GAGTTTTCGAAATCTTCAGTCTTGTCATAGTCATC < 1:20190893/35‑1 GAGTTTTCGAAATCTTCAGTCTTGTCATAGTCATC < 1:1920423/35‑1 AGCATTGCACCGATAGAAAAACCGACACCCGCCCAGCCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3780513‑3780471 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccagcagAGTTTTCGAAATCTTCAGTCTTGTCATAGTCATC < REL606/4600662‑4600629 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |