New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1181580 | 88 (0.860) | 8 (0.100) | 3/38 | NT | 11.2% | coding (919/1305 nt) | ndh | respiratory NADH dehydrogenase 2/cupric reductase |
? | REL606 | 2872317 = | 57 (0.700) | coding (1204/1263 nt) | lysA | diaminopimelate decarboxylase, PLP‑binding |
Only 100 of 114 total aligned reads displayed.
TCTTCGATGGTCTGGCGACGGCGAATCAA‑CCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGC > REL606/2872283‑2872351 | tcttcGATGTTCTGGCGACGGCGAATCAA‑CCccgc > 1:5091512/1‑35 (MQ=37) ttcGATGGTCTGGCGACGGCGAATCAA‑CCGCGCCt > 1:11130428/1‑35 (MQ=255) tcGATGGTCTGGCGACGGCGAATCAA‑CCGCGCCTg > 1:13185630/1‑35 (MQ=255) cGATGGTCTGGCGACGGCGAATCAA‑CCGCGCCTGa > 1:10210541/1‑35 (MQ=255) gATGGTCTGGCGACGGCGAATCAA‑CCGCGCCTGAc > 1:8483323/1‑35 (MQ=255) aTGGTCTGGCGACTGCGAATCAA‑CCGCGCCTGAcc > 1:15291337/1‑35 (MQ=255) aTGGTCTGGCGACGGCGAATCAA‑CCGCGCCTGAcc > 1:6783369/1‑35 (MQ=255) tGGTCTGGCGACGGCGAATCAA‑ACGCGCCTGACCa > 1:16348004/1‑35 (MQ=255) ggTCTGGCGACGGCGAATCAA‑CCGCGCCTGACCAt > 1:18556256/1‑35 (MQ=255) gTCTGGCGACGGCGAATCAA‑CCTCGCCTGACCAtt > 1:13849540/1‑35 (MQ=255) gTCTGGCGACGGCGAATCAA‑CCGCGCCTGACCAtt > 1:291109/1‑35 (MQ=255) tCTGGCGACGGCGAATCAA‑CCGCGCCTGACCATTa > 1:11820437/1‑35 (MQ=255) tCTGGCGACGGCGAATCAA‑CCGCGCCTGACCATTa > 1:12599004/1‑35 (MQ=255) tCTGGCGACGGCGAATCAA‑CCGCGCCTGACCATTa > 1:4174536/1‑35 (MQ=255) cTGGCGACGGCGAATCAA‑CCGCGCCTGACCATTAt > 1:16900145/1‑35 (MQ=255) tGGCGACGGCGAATCAA‑CCGCGCCTGACCATTATc > 1:16395571/1‑35 (MQ=255) tGGCGACGGCGAATCAA‑CCGCGCCTGACCATTATc > 1:13361223/1‑35 (MQ=255) ggCGACGGCGAATCAA‑CCGCTCCTGACCATTATCa > 1:10492211/1‑35 (MQ=255) ggCGACGGCGAATCAA‑CCGCGCCTGACCATTATCa > 1:16434678/1‑35 (MQ=255) ggCGACGGCGAATCAA‑CCGCGCCTGACCATTATCa > 1:13048152/1‑35 (MQ=255) ggCGACGGCGAATCAA‑CCGCGCCTGACCATTATCa > 1:17729237/1‑35 (MQ=255) gCGCCGGCGAACCAC‑CCGCGCCTGACCATTATCaa < 1:8561950/35‑1 (MQ=25) gCGCCGGCAAACCAC‑CCGCGCCTGACCATTATCaa < 1:8776078/35‑1 (MQ=19) gCGACTGCGAATCAA‑CCGCGCCTGACCATTATCaa > 1:14251418/1‑35 (MQ=255) gCGACGGCGAATCAA‑CCGCGCCTGACCATTATCaa > 1:19031857/1‑35 (MQ=255) gCGACGGCGAATCAA‑CCGCGCCTGACCATTATCaa > 1:4931829/1‑35 (MQ=255) cGACGGCGAATCAA‑CCGCGCCTGACCATTATCaaa > 1:8643929/1‑35 (MQ=255) gACTGCGAATCAA‑CCGCGCCTGACCATTATCAAAc > 1:5754857/1‑35 (MQ=255) gACGGCGAATCAA‑CCGCGCCTGACCATTATCAAAc > 1:2572760/1‑35 (MQ=255) gACGGCGAATCAA‑CCGCGCCTGACCATTATCAAAc > 1:13336830/1‑35 (MQ=255) gACGGCGAATCAA‑CCGCGCCTGACCATTATCAAAc > 1:2504454/1‑35 (MQ=255) gACGGCGAATCAA‑CCGCGCCTGACCATTATCAAAc > 1:8255744/1‑35 (MQ=255) gACGGCGAATCAA‑CCGCGCCTGACCATTATCAAAc > 1:8520225/1‑35 (MQ=255) gACGGCGAATCAA‑CCGCGCCTGACCATTATCAAAc > 1:10123977/1‑35 (MQ=255) gACGCCGAATCAC‑CCGCGCCTGACCATTATCAAAc < 1:20131749/35‑1 (MQ=37) gcGGCGAACCAC‑CCGCGCCTGACCATTATCAAACa < 1:570421/34‑1 (MQ=25) aCGGCGAATCAC‑CCGCGCCTGACCATTATCAAACa < 1:20362382/35‑1 (MQ=255) aCGGCGAATCAA‑CCGCGCCTGACCATTATCAAACa > 1:17498079/1‑35 (MQ=255) aCGGCGAATCAA‑CCGCGCCTGACCATTATCAAACa > 1:9518491/1‑35 (MQ=255) aCGGCGAATCAA‑CCGCGCCTGACCATTATCAAACa > 1:10088901/1‑35 (MQ=255) aCGGCGAATCAA‑CCGCGCCTGACCATTATCAAACa > 1:16868285/1‑35 (MQ=255) aCGGCGAATCAA‑CCGCGCCTGACCATTATCAAACa > 1:14175881/1‑35 (MQ=255) ggacGAAACAC‑CCGCGCCTGACCATTATCAAACAg < 1:3078761/32‑1 (MQ=25) cGGCGAATCAA‑CCGCGCCTGACCATTATCAAACAg > 1:19544827/1‑35 (MQ=255) cGGCAAATCAC‑CCGCGCCTGACCATTATAAAACAg < 1:20560156/35‑1 (MQ=25) gggcaaaccacccgcgCCTGACCATTATCAAACAg < 1:6532756‑M2/19‑1 (MQ=255) ggCGAATCAA‑CCGCGCCTGACCATTATCAAACAGa > 1:11995251/1‑35 (MQ=255) ggCGAATCAA‑CCGCGCCTGACCATTATCAAACAGa > 1:15042050/1‑35 (MQ=255) ggcaaaccacccgcgCCTGACCATTATCAAACAGa < 1:3833212‑M2/20‑1 (MQ=255) gCGAATCAA‑CCGCGCCTGACCATTATCAAACAGaa > 1:11299605/1‑35 (MQ=255) gCGAATCAA‑CCGCGCCTGACCATTATCAAACAGaa > 1:47903/1‑35 (MQ=255) gCGAATCAA‑CCGCGCCTGACCATTAACAAACAGaa > 1:3863281/1‑35 (MQ=255) gcgaaccacccgcgCCTGACCATTATCAAACAGaa < 1:5035346‑M2/21‑1 (MQ=255) caaaaccacccgcgCCTGACCATTATCAAACAGaa < 1:17137696‑M2/21‑1 (MQ=255) gAATCAA‑CCGCGCCTGACCATTATCAAACAGAACt > 1:66913/1‑35 (MQ=255) caaaccacccgcgCCTGACCATTATCAAACAGAAc < 1:4663460‑M2/22‑1 (MQ=255) gaTCAACCCGCGCCTGACCATTATCAAACAGAACt < 1:18489417/34‑1 (MQ=37) aaTCAA‑CCGCGCCTGACCATTATCAAACAGAACtt > 1:423412/1‑35 (MQ=255) aaTCAA‑CCGCGCCTGACCATTATCAAACAGAACtt > 1:385364/1‑35 (MQ=255) aTCAA‑CCGCGCCTGACCATTATCAAACAGAACTTc > 1:1862486/1‑35 (MQ=255) accacccgcgCCTGACCATTATCAAACAGAACTTc < 1:17970523‑M2/25‑1 (MQ=255) tcacccgcgCCTGACCATTATCAAACAGAACTTCt < 1:12173202‑M2/26‑1 (MQ=255) ccacccgcgCCTGACCATTATCAAACAGAACTTCt < 1:10148562‑M2/26‑1 (MQ=255) cAA‑CCGCGCATGACCATTATCAAACAGAACTTCTg < 1:5790833/35‑1 (MQ=255) acacccgcgCCTGACCATTATCAAACAGAACTTCt < 1:20313675‑M2/26‑1 (MQ=255) acacccgcgCCTGACCATTATCAAACAGAACTTCt < 1:8931517‑M2/26‑1 (MQ=255) cacccgcgCCTGACCATTATCAAACAGAACTTCTg < 1:3665170‑M2/27‑1 (MQ=255) cacccgcgCCTGACCATTATCAAACAGAACTTCTg < 1:15791783‑M2/27‑1 (MQ=255) acccgcgCCTGACCATTATCAAACAGAACTTCTgg < 1:17719599‑M2/28‑1 (MQ=255) acccgcgCCTGACCATTATCAAACAGAACTTCTgg < 1:10546972‑M2/28‑1 (MQ=255) a‑CCTCGCCTGACCATTATCAAACAGAACTTCTGGt > 1:14093408/1‑35 (MQ=255) a‑CCGCGCCTGACCATTATCAAACAGAACTTCTGGt > 1:16485857/1‑35 (MQ=255) a‑CCGCGCCTGACCATTATCAAACAGAACTTCTGGt > 1:17578426/1‑35 (MQ=255) a‑CCGCGCCTGACCATTATCAAACAGAACTTCTGGt > 1:452912/1‑35 (MQ=255) a‑CCGCGCCTGACCATTATCAAACAGAACTTCTGGt > 1:12603793/1‑35 (MQ=255) cccgcgCCTGACCATTATCAAACAGAACTTCTGGt < 1:8525138‑M2/29‑1 (MQ=255) cccgcgCCTGACCATTATCAAACAGAACTTCTGGt < 1:4962095‑M2/29‑1 (MQ=255) cccgcgCCTGACCATTATCAAACAGAACTTCTGGt < 1:19308749‑M2/29‑1 (MQ=255) cccgcgCCTGACCATTATCAAACAGAAATTCTGGt < 1:8561052‑M2/29‑1 (MQ=255) ccgcgCCTGACCATTATCAAACAGAACTTCTGGTa < 1:13268672‑M2/30‑1 (MQ=255) ccgcgCCTGACCATTATCAAACAGAACTTCTGGTa < 1:17786542‑M2/30‑1 (MQ=255) ccgcgCCTGACCATTATCAAACAGAACTTCTGGTa < 1:8862396‑M2/30‑1 (MQ=255) cgcgCCTGACCATTATCAAACAGAACTTCTGGTaa > 1:6323340‑M2/5‑35 (MQ=255) cgcgCCTGACCATTATCAAACAGAACTTCTGGTaa < 1:19777637‑M2/31‑1 (MQ=255) gcgCCTGACCATTATCAAACAGAACTTCTGGTAAc > 1:12120814‑M2/4‑35 (MQ=255) gcgCCTGACCATTATCAAACAGAACTTCTGGTAAc > 1:3395688‑M2/4‑35 (MQ=255) gcgCCTGACCATTATCAAACAGAACTTCTGGTAAc < 1:10687953‑M2/32‑1 (MQ=255) cgCCTGACCATTATCAAACAGAACTTCTGGTAACa > 1:19370389‑M2/3‑35 (MQ=255) cgCCTGACCATTATCAAACAGAACTTCTGGTAACa < 1:949267‑M2/33‑1 (MQ=255) cgCCTGACCATTATCAAACAGAACTTCTGGTAACa > 1:9441348‑M2/3‑35 (MQ=255) cgCCTGACCATTATCAAACAGAACTTCTGGTAACa > 1:7817113‑M2/3‑35 (MQ=255) cgCCTGACCATTATCAAACAGAACTTCTGGTAACa < 1:17954251‑M2/33‑1 (MQ=255) gCCTGACCATTATCAAACAGAACTTCTGGTAACAg < 1:15494417‑M2/34‑1 (MQ=255) gCCTGACCATTATCAAACAGAACTTCTGGTAACAg > 1:15706322‑M2/2‑35 (MQ=255) gCCTGACCATTATCAAACAGAACTTCTGGTAACAg > 1:18618698‑M2/2‑35 (MQ=255) gCCTGACCATTATCAAACAGAACTTCTGGTAACAg > 1:2719616‑M2/2‑35 (MQ=255) ccTGACCATTATCAAACAGAACTTCTGGTAACAGc < 1:238038/35‑1 (MQ=255) ccTGACCATTATCAAACAGAACTTCTGGTAACAGc > 1:10632988/1‑35 (MQ=255) ccTGACCATTATCAAACAGAACTTCTGGTAACAGc < 1:11968347/35‑1 (MQ=255) ccTGACCATTATCAAACAGAACTTCTGGTAACAGc > 1:13851958/1‑35 (MQ=255) | TCTTCGATGGTCTGGCGACGGCGAATCAA‑CCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGC > REL606/2872283‑2872351 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |