New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3625460 | 64 (0.620) | 22 (0.260) | 7/40 | NT | 30.7% | pseudogene (3/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
? | REL606 | = 3992020 | 46 (0.540) | coding (141/510 nt) | ECB_03720 | conserved hypothetical protein |
TGATGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3625423‑3625460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcCATTGAAACGGATCCCGGTGCAAGTGCCTTCCCT < REL606/3992020‑3991987 TGATGGTTGTTGTCCCCACGCCTCCCCGCCCCCCC < 1:9259149/35‑1 ATGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCTG < 1:14295100/35‑1 ATGGTTGTTGTCCCCAAGCCTCCCCGCCCCCCCTG < 1:6379697/35‑1 TGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCctg < 1:12126136/35‑4 TGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGC < 1:15659230/35‑1 cCCTCCCCCCCCCCCCTGCCATTGAAACGGATCCC < 1:16997067/34‑1 CCTCCCCCCCCCCCCTGCCATTGAAACGGATCCCG < 1:8674388/35‑1 CTCCCCCCCCCCCCTGCCATTGAAACGGATCCCGG < 1:1308403/35‑1 cCCCCCCCCCCCCTGCCATTGAAACGGATCCCGGT < 1:9966379/34‑1 cCCCCCCCCCCCCTGCCATTGAAACGGATCCCGGT < 1:1995988/34‑1 aCCCCCCCCCCCCTGCCATTGAAACGGATCCCGGT < 1:6293306/34‑1 TCCCCCCCCCCCCTGCCATTGAAACGGATCCCGGT < 1:6995215/35‑1 tCCCCCCCCCCCTGCCATTGAAACGGATCCCGGTG < 1:11425242/34‑1 CCCCCCCCCCCCTGCCATTGAAACGGATCCCGGTG < 1:7546485/35‑1 CCCCCCCCCCCCTGCCATTGAAACGGATCCCGGTG < 1:10625689/35‑1 CCCCCCCCCCCCTGCCATTGAAACGGATCCCGGTG < 1:9634289/35‑1 CCCCCCCCCCCTGCCATTGAAACGGATCCCGGTGC < 1:5198390/35‑1 CCCCCCCCCCCTGCCATTGAAACGGATCCCGGTGC < 1:10205387/35‑1 CCGCCCCCCCTGCCATTGAAACGGATCCCGGTGCA < 1:13469155/35‑1 ccCCCCCCCTGCCATTGAAACGGATCCCGGTGCAA < 1:5069608/33‑1 ccCCCCCCCTGCCATTGAAACGGATCCCGGTGCAA < 1:8891533/33‑1 ccCCCCCCCTGCCATTGAAACGGATCCCGGTGCAA < 1:17371525/33‑1 cCCCCCCCTGCCATTGAAACGGATCCCGGTGCAAG < 1:7222412/34‑1 cCCCCCCCTGCCATTGAAACGGATCCCGGTGCAAG < 1:2482922/34‑1 CCCCCCCTGCCATTGAAACGGATCCCGGTGCAAGT < 1:13869767/35‑1 CCCCCCCTGCCATTGAAACGGATCCCGGTGCAAGT < 1:9414892/35‑1 CCCCCCCTGCCATTGAAACGGATCCCGGTGCAAGT < 1:19351283/35‑1 CCCCCCTGCCATTGAAACGGATCCCGGTGCAAGTG < 1:15353296/35‑1 CCCCCCTGCCATTGAAACGGATCCCGGTGCAAGTG < 1:376980/35‑1 CCCCCCTGCCATTGAAACGGATCCCGGTGCAAGTG < 1:10130357/35‑1 CCCCTGCCATTGAAACGGATCCCGGTGCAAGTGCC < 1:3100798/35‑1 CCCCTGCCATTGAAACGGATCCCGGTGCAAGTGCC < 1:18666712/35‑1 CCCCTGCCATTGAAACGGATCCCGGTGCAAGTGCC < 1:17840025/35‑1 CCCTGCCATTGAAACGGATCCCGGTGCAAGTGCCT < 1:104660/35‑1 CCCTGCCATTGAAACGGATCCCGGTGCAAGTGCCT < 1:13326347/35‑1 CCTGCCATTGAAACGGATCCCGGTGCAAGTGCCTT < 1:10238596/35‑1 CCTGCCATTGAAACGGATCCCGGTGCAAGTGCCTT < 1:908297/35‑1 CCTGCCATTGAAACGGATCCCGGTGCAAGTGCCTT < 1:733857/35‑1 CCTGCCATTGAAACGGATCCCGGTGCAAGTGCCTT < 1:6349489/35‑1 CCTGCCATTGAAACGGATCCCGGTGCAAGTGCCTT < 1:13474168/35‑1 CCTGCCATTGAAACGGATCCCGGTGCAAGTGCCTT < 1:161849/35‑1 CCTGCCATTGAAACGGATCCAGGTGCAAGTGCCTT < 1:10419030/35‑1 CTGCCATTGAAACGGATCCCGGTGCAAGTGCCTTC > 1:15374690/1‑35 CTGCCATTGAAACGGATCCCGGTGCAAGTGCCTTC > 1:17163340/1‑35 CTGCCATTGAAACGGATCCCGGTGCAAGTGCCTTC > 1:7237249/1‑35 CTGCCATTGAAACGGATCCCGGTGCAAGTGCCTTC < 1:7052560/35‑1 TGCCATTGAAACGGATCCCGGTGCAAGTGCCTTCC > 1:10116050/1‑35 TGCCATTGAAACGGATCCCGGTGCAAGTGCCTTCC > 1:951964/1‑35 TGCCATTGAAACGGATCCCGGTGCAAGTGCCTTCC < 1:11547017/35‑1 TGCCATTGAAACGGATCCCGGTGCAAGTGCCTTCC > 1:13384080/1‑35 cCCATTGAAACGGATCCCGGTGCAAGTGCCTTCCC > 1:27020/2‑35 GCCATTGAAACGGATCCCGGTGCAAGTGCCTTCCC < 1:16314315/35‑1 GCCATTGAAACGGATCCCGGTGCAAGTGCCTTCCC > 1:16509266/1‑35 GCCATTGAAACGGATCCCGGTGCAAGTGCCTTCCC > 1:5233909/1‑35 GCCATTGAAACGGATCCCGGTGCAAGTGCCTTCCC < 1:8333603/35‑1 GCCATTGAAACGGATCCCGGTGCAAGTGCCTTCCC < 1:10293208/35‑1 GCCATTGAAACGGATCCCGGTGCAAGTGCCTTCCC > 1:17648561/1‑35 CCATTGAAACGGATCCCGGTGCAAGTGCCTTCCCT > 1:13467677/1‑35 CCATTGAAACGGATCCCGGTGCAAGTGCCTTCCCT > 1:6204930/1‑35 CCATTGAAACGGATCCCGGTGCAAGTGCCTTCCCT > 1:11312685/1‑35 CCATTGAAACGGATCCCGGTGCAAGTGCCTTCCCT > 1:19098239/1‑35 CCATTGAAACGGATCCCGGTGCAAGTGCCTTCCCT < 1:18805687/35‑1 CCATTGAAACGGATCCCGGTGCAAGTGCCTTCCCT > 1:15046405/1‑35 CCATTGAAACGGATCCCGGTGCAAGTGCCTTCCCT < 1:15521541/35‑1 CCATTGAAACGGATCCCGGTGCAAGTGCCTTCCCT < 1:2842419/35‑1 TGATGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3625423‑3625460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcCATTGAAACGGATCCCGGTGCAAGTGCCTTCCCT < REL606/3992020‑3991987 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |