Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 554,531 | 0 | T→G | 100.0% | 0.2 | 2 | S897R (AGT→AGG) | ECB_00512 | putative tail component of prophage |
Rejected: E-value exceeds prediction threshold. | ||||||||||
Reads supporting (aligned to +/- strand): new base (2/0): ref base (0/0): total (2/0) |
ATACGGGTGTTATTGATATGCCTGCAGGCAGTGGTGTAATGACACT > REL606/554500‑554545 | ataCGGGTGTTATTGATATGCCTGCAGGCAggggg > 1:14187413/1‑34 (MQ=0) ataCGGGTGTTATTGATATGCCTGCAGGCAggggg > 1:5374510/1‑34 (MQ=0) ataCGGGTGTTATTGATATGCCTGCAGGCAggggg > 1:573290/1‑34 (MQ=0) ataCGGGTGTTATTGATATGCCTGCAGGCAggggg > 1:7306992/1‑34 (MQ=0) ataCGGGTGTTATTGATATGCCTGCAGGCAggggg > 1:8770205/1‑34 (MQ=0) aCGGGTGTTATTGATATGCCTGCAGGCAggggggg > 1:13154887/1‑32 (MQ=1) ggTGTTATTGATATGCCTGCAGGCAGGGGGGTGAt > 1:12285626/1‑35 (MQ=1) aTTGATATGCCTGCAGGCAGGGGGGTAATGaaacc > 1:4715213/1‑34 (MQ=1) aTTGATATGCCTGCAGGCAGGGGGGGCATGACCCt > 1:10461217/1‑35 (MQ=0) | ATACGGGTGTTATTGATATGCCTGCAGGCAGTGGTGTAATGACACT > REL606/554500‑554545 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |