New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2095315 = | 91 (0.890) | 5 (0.070) | 3/34 | NT | 6.2% | coding (744/1416 nt) | yegB | multidrug efflux system protein |
? | REL606 | 2237509 = | 87 (1.200) | intergenic (+34/+69) | proL/yejO | tRNA‑Pro/predicted autotransporter outer membrane protein |
Only 100 of 213 total aligned reads displayed.
AAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGA > REL606/2237475‑2237543 | acggaacagtttcagactgaacagggcacggttgg > 1:14313173‑M2/35‑35 (MQ=255) aaaaaTCCCAAGAAAAAACCAACCCTTACggttgg > 1:14188445/1‑35 (MQ=255) cggaacagtttcagactgaacagggcacggttggt > 1:18409361‑M2/34‑35 (MQ=255) cggaacagtttcagactgaacagggcacggttggt > 1:9254696‑M2/34‑35 (MQ=255) cggaacagtttcagactgaacagggcacggttggg > 1:20196824‑M2/34‑34 (MQ=255) aaaaTCCCAAGAAAAAACCAACCCTTACggttggt > 1:6887393/1‑35 (MQ=255) ggaacagtttcagactgaacagggcacggttggta > 1:18105907‑M2/33‑34 (MQ=255) ggaacagtttcagactgaacagggcacggttggta > 1:4503982‑M2/33‑34 (MQ=255) aaaTCCCAAGAAAAAACCAACCCTTACggttggtt < 1:12751330/35‑1 (MQ=255) aaaTCCCAAGAAAAAACCAACCCTTACggttggtt > 1:4992041/1‑35 (MQ=255) gaacagtttcagactgaacagggcacggttggtat > 1:7319990‑M2/32‑33 (MQ=255) gaacagtttcagactgaacagggcacggttggtat > 1:13086870‑M2/32‑33 (MQ=255) aaTCCCAAGAAAAAACCAACCCTTACGGTTGGttt < 1:18244993/35‑1 (MQ=255) aaTCCCAAGAAAAAACCAACCCTTACGGTTGGttt < 1:3704182/35‑1 (MQ=255) aaTCCCAAGAAAAAACCAACCCTTACGGTTGGttt > 1:915091/1‑35 (MQ=255) aaTCCCAAGAAAAAACCAACCCTTACGGTTGGttt < 1:5774860/35‑1 (MQ=255) aaTCCCAAGAAAAAACCAACCCTTACGGTTGGttt < 1:5173407/35‑1 (MQ=255) aacagtttcagactgaacagggcacggttgGtatt > 1:4710812‑M2/31‑35 (MQ=255) aacagtttcagactgaacagggcacggttgGtatt > 1:4398041‑M2/31‑35 (MQ=255) aTCCCAAGAAAAAACCAACCCTTACGGTTGGtttt > 1:1863060/1‑35 (MQ=255) tCCCAAGAAAAAACCAACCCTTACGGTTGGttttt > 1:13402695/1‑35 (MQ=255) tCCCAAGAAAAAACCAACCCTTACGGTTGGttttt > 1:8082189/1‑35 (MQ=255) acagtttcagactgaacagggcacggttgGtattt > 1:15265119‑M2/30‑35 (MQ=255) cccAAGAAAAAACCAACCCTTACTGTTGGgttttt > 1:8890619/1‑35 (MQ=37) cccAAGAAAAAACCAACCCTTACGGTTGGtttttt > 1:19731616/1‑35 (MQ=255) cagtttcagactgaacagggcacggttgGtttttt > 1:6996649‑M2/29‑35 (MQ=255) ccAAGAAAAAACCAACCCTTACGGTTGGttttttt > 1:8153461/1‑35 (MQ=255) ccAAGAAAAAACCAACCCTTACGGTTGGttttttt > 1:17211790/1‑35 (MQ=255) cAAGAAAAAACCAACCCTTACGGTTGGTTTTTTta > 1:457856/1‑35 (MQ=255) cAAGAAAAAACCAACCCTTACGGTTGGTTTTTTta < 1:1236241/35‑1 (MQ=255) aaGAAAAAACCAACCCTTACGGTTGGTTTTTTtat < 1:6578583/35‑1 (MQ=255) aaGAAAAAACCAACCCTTACGGTTGGTTTTTTtat < 1:2196677/35‑1 (MQ=255) aaGAAAAAACCAACCCTTACGGTTGGTTTTTTtat > 1:6677795/1‑35 (MQ=255) aaGAAAAAACCAACCCTTACGGTTGGTTTTTTtat > 1:1029987/1‑35 (MQ=255) aaGAAAAAACCAACCCTTACGGTTGGTTTTTTtat > 1:1479126/1‑35 (MQ=255) aaGAAAAAACCAACCCTTACGGTTGGTTTTTTtat > 1:12266890/1‑35 (MQ=255) aGAAAAAACCAACCCTTACGGTTGGTTTTTTtata > 1:352115/1‑35 (MQ=255) aGAAAAAACCAACCCTTACGGTTGGCTTTTTtata > 1:3018593/1‑35 (MQ=255) gAAAAAACCAACCCTTACGGTTGGTTTTTTTatat > 1:7531783/1‑35 (MQ=255) aaaaaaCCAACCCTTACGGTTGGTTTTTTTATATc > 1:18939604/1‑35 (MQ=255) aaaaaaCCAACCCTTACGGTTGGTTTTTTTATATc < 1:16032252/35‑1 (MQ=255) aaaaaaCCAACCCTTACGGTTGGTTTTTTTATATc < 1:16306350/35‑1 (MQ=255) aaaaaCCAACCCTTACGGTTGGTTTTTTTATATCt < 1:2402673/35‑1 (MQ=255) aaaaaCCAACCCTTACGGTTGGTTTTTTTATATCt < 1:8480701/35‑1 (MQ=255) aaaaCCAACCCTTACGGTTGGTTTTTTTATATCtt > 1:16772024/1‑34 (MQ=255) aaaaCCAACCCTTACGGTTGGTTTTTTTATATCTg < 1:5525126/35‑1 (MQ=255) aaaCCAACCCTTACGGTTGGTTTTTTTATATCTGc < 1:17720525/35‑1 (MQ=255) aaaCCAACCCTTACGGTTGGTTTTTTTATATCTGc > 1:7246160/1‑35 (MQ=255) aaccaaccCTTACGGTTGGTTTTTTTATATCTGCa > 1:5135667/1‑35 (MQ=255) aaccaaccCTTACGGTTGGTTTTTTTATATCTGCa < 1:1539886/35‑1 (MQ=255) accaaccCTTACGGTTGGTTTTTTTATATCTGCaa < 1:1860393/35‑1 (MQ=255) accaaccCTTACGGTTGGTTTTTTTATATCTGCaa < 1:12144465/35‑1 (MQ=255) ccagccCTTACGGTTGGTTTTTTTATATCTGCaat < 1:19343489/35‑1 (MQ=255) ccaaccCTTACGGTTGGTTTTTTTATATCTGCaat < 1:5438119/35‑1 (MQ=255) ccaaccCTTACGGTTGGTTTTTTTATATCTGCaat > 1:3095739/1‑35 (MQ=255) ccaaccCTTACGGTTGGTTTTTTTATATCTGCaat > 1:4280294/1‑35 (MQ=255) aaccCTTACGGTTGGTTTTTTTATATCTGCaatta < 1:6504773/35‑1 (MQ=255) aaccCTTACGGTTGGTTTTTTTATATCTGCaatta > 1:12964466/1‑35 (MQ=255) aaccCTTACGGTTGGTTTTTTTATATCTGCaatta > 1:9675455/1‑35 (MQ=255) accCTTACTGTTGGTTTTTTTATATCTGCaattaa > 1:8758579/1‑35 (MQ=255) accCTTACGGTTGGTTTTTTTATATCTGCaattaa < 1:18544987/35‑1 (MQ=255) accCTTACGGTTGGTTTTTTTATATCTGCaattaa < 1:6383837/35‑1 (MQ=255) cccTTACGGTTGGTTTTTTTATATCTGCaattaat < 1:1063082/35‑1 (MQ=255) cccTTACGGTTGGTTTTTTTATATCTGCaattaat > 1:6896715/1‑35 (MQ=255) cccTTACGGTTGGTTTTTTTATATCTGCaattaat < 1:14350977/35‑1 (MQ=255) cccTTACGGTTGGTTTTTTTATATCTGCaattaat < 1:19946816/35‑1 (MQ=255) ccTTACGGTTGGTTTTTTTATATCTGCaattaatt > 1:4061562/1‑35 (MQ=255) cTTGCGGTTGGTTTTTTTATATCTGCAATTAATTc < 1:12808733/35‑1 (MQ=255) ttACGGTTGGTTTTTTTATATCTGCAATTAATTCg > 1:11413899/1‑35 (MQ=255) ttACGGTTGGTTTTTTTATATCTGCAATTAATTCg < 1:7866844/35‑1 (MQ=255) ttACGGTTGGTTTTTTTATATCTGCAATTAATTCg < 1:14524772/35‑1 (MQ=255) ttACGGTTGGTTTTTTTATATCTGCAATTAATTCg > 1:20256514/1‑35 (MQ=255) tACGGTTGGTTTTTTTATATCTGCAATTAATTCGa < 1:20355504/35‑1 (MQ=255) tACGGTTGGTTTTTTTATATCTGCAATTAATTCGa < 1:15715367/35‑1 (MQ=255) tACGGTTGGTTTTTTTATATCTGCAATTAATTCGa > 1:5609160/1‑35 (MQ=255) tACGGTTGGTTTCTTTATATCTGCAATTAATTCGa > 1:9051635/1‑35 (MQ=255) acggttgGTTTTTTTATATCTGCAATTAATTCGAt > 1:16519847‑M2/8‑35 (MQ=255) acggttgGTTTTTTTATATCTGCAATTAATTCGAt > 1:17995204‑M2/8‑35 (MQ=255) acggttgGTTTTTTTATATCTGCAATTAATTCGAt > 1:8251212‑M2/8‑35 (MQ=255) acggttgGTTTTTTTATATCTGCAATTAATTCGAt < 1:3404385‑M2/28‑1 (MQ=255) acggttgGGTTTTTTATATCTGCAATTAATTCGAt > 1:14913557‑M2/8‑35 (MQ=255) cggttgGTTTTTTTATATCTGCAATTAATTCGATa < 1:12438530‑M2/29‑1 (MQ=255) cggttgGTTTTTTTATATCTGCAATTAATTCGATa < 1:10849157‑M2/29‑1 (MQ=255) ggttgGTTTTTTTATATCTGCAATTAATTCGATaa < 1:7767437‑M2/30‑1 (MQ=255) ggttgGTTTTTTTATATCTGCAATTAATTCGATaa < 1:17077031‑M2/30‑1 (MQ=255) ggttgGTTTTTTTATATCTGCAATTAATTCGATaa > 1:11531017‑M2/6‑35 (MQ=255) ggttgGTTTTTTTATATCTGCAATTAATTCGATaa > 1:11781561‑M2/6‑35 (MQ=255) ggttgGTTTTTTTATATCTGCAATTAATTCGATaa < 1:6062511‑M2/30‑1 (MQ=255) ggttgGTTTTTTTATATCTGCAATTAATTCGATaa > 1:15500457‑M2/6‑35 (MQ=255) gttgGTTTTTTTATATCTGCAATTAATTCGATaaa < 1:17492287‑M2/31‑1 (MQ=255) gttgGTTTTTTTATATCTGCAATTAATTCGATaaa < 1:11004850‑M2/31‑1 (MQ=255) ttgGTTTTTTTATATCTGCAATTAATTCGATAAAc > 1:15962640‑M2/4‑35 (MQ=255) ttgGTTTTTTTATATCTGCAATTAATTCGATAAAc > 1:15229937‑M2/4‑35 (MQ=255) ttgGTTTTTTTATATCTGCAATTAATTCGATAAAc < 1:344660‑M2/32‑1 (MQ=255) ngttTTTTTATATCTGCAATTAATTCGATAAACat > 1:7906913/2‑34 (MQ=255) gGTTTTTTTATATCTGCAATTAATTCGATAAACAg > 1:7682232‑M2/2‑35 (MQ=255) gGTTTTTTTATATCTGCAATTAATTCGATAAACAg < 1:6619667‑M2/34‑1 (MQ=255) gGTTTTTTTATATCTGCAATTAATTCGATAAACAg > 1:17387306‑M2/2‑35 (MQ=255) gGTTTTTTTATATCTGCAATTAATTCGATAAACAg > 1:12647544‑M2/2‑35 (MQ=255) gGTTTTTTTATATCTGCAATTAATTCGATAAACAg < 1:1672449‑M2/34‑1 (MQ=255) | AAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGA > REL606/2237475‑2237543 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |