New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 68136568 (0.660)10 (0.180) 3/26 NT 18.0% intergenic (‑93/+304) asnB/nagD asparagine synthetase B/UMP phosphatase
?REL606 = 2930921 54 (0.970)coding (734/744 nt) ygfF predicted NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain

Only 100 of 163 total aligned reads displayed.

ATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGA  >  REL606/2930887‑2930955
                                  |                                  
aTCCTGTCAGACAACTTCCCTGTTTTATTTcccgc                                    >  1:17887230/1‑35 (MQ=255)
aTCCGGTCNGACAACTTCCCTGTTTTATTTcccgc                                    >  1:3455855/1‑35 (MQ=255)
aTCCGGTCAGACAACTTCCCTGTTTTATTTtccgc                                    >  1:15378190/1‑35 (MQ=255)
aTCCGGTCAGACAACTTCCCTGTTTTATTTcccgc                                    <  1:4663581/35‑1 (MQ=255)
aTCCGGTCAGACAACTTCCCTGTTTTATTTcccgc                                    >  1:8464959/1‑35 (MQ=255)
 tCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCc                                   <  1:9010134‑M2/35‑2 (MQ=255)
 tCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCc                                   <  1:8743240‑M2/35‑2 (MQ=255)
 tCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCc                                   >  1:2162205‑M2/1‑34 (MQ=255)
  ccGGTCAGACAACTTCCCTGTTTTATTTCCCGCcc                                  <  1:14989496‑M2/35‑3 (MQ=255)
  caggtcAGACAACTTCCCTGTTTTATTTCCCGCcc                                  >  1:19077827‑M2/3‑33 (MQ=255)
   cGGTCAGACAACTTCCCTGTTTTATTTCCCGCccg                                 <  1:10366089‑M2/35‑4 (MQ=255)
    gttcaGACAACTTCCCTGTTTTATTTCCCGCccgc                                >  1:3327609‑M2/3‑31 (MQ=255)
    ggTCAGACAACTTCCCTGTTTTATTTCCCGCccgc                                <  1:15741811‑M2/35‑5 (MQ=255)
    ggTCAGACAACTTCCCTGTTTTATTTCCCGCccgc                                <  1:14013510‑M2/35‑5 (MQ=255)
    ggTCAGACAACTTCCCTGTTTTATTTCCCGCccgc                                <  1:4390874‑M2/35‑5 (MQ=255)
     gTCAGACAACTTCCCTGTTTTATTTCCCGCccgcc                               <  1:8700330‑M2/35‑6 (MQ=255)
     gTCAGACAACTTCCCTGTTTTATTTCCCGCccgcc                               <  1:899658‑M2/35‑6 (MQ=255)
     gTCAGACAACTTCCCTGTTTTATTTCCCGCccgcc                               >  1:18296313‑M2/1‑30 (MQ=255)
      tCAGACAACTTCCCTGTTTTATTTCCCGCccgcca                              <  1:19554008‑M2/35‑7 (MQ=255)
      tCAGACAACTTCCCTGTTTTATTTCCCGCccgcca                              >  1:14459999‑M2/1‑29 (MQ=255)
      tCAGACAACTTCCCTGTTTTATTTCCCGCccgcca                              <  1:6734814‑M2/35‑7 (MQ=255)
       cAGACAACTTCCCTGTTTTATTTCCCGCccgccaa                             <  1:3345397‑M2/35‑8 (MQ=255)
       cAGACAACTTCCCTGTTTTATTTCCCGCccgccaa                             <  1:19649537‑M2/35‑8 (MQ=255)
        aGACAACTTCCCTGTTTTATTTCCCGCccgccaaa                            <  1:4220841‑M2/35‑9 (MQ=255)
        aGACAACTTCCCTGTTTTATTTCCCGCccgccaaa                            <  1:4876301‑M2/35‑9 (MQ=255)
        aGACAACTTCCCTGTTTTATTTCCCGCccgccaaa                            <  1:11726503‑M2/35‑9 (MQ=255)
        aGACAACTTCCCTGTTTTATTTCCCGCccgccaaa                            <  1:19919266‑M2/35‑9 (MQ=255)
         gACAACTTCCCTGTTTTATTTCCCGCccgccaaat                           >  1:9553769‑M2/1‑26 (MQ=255)
         gACAACTTCCCTGTTTTATTTCCCGCccgccaaat                           >  1:10129608‑M2/1‑26 (MQ=255)
         gACAACTTCCCTGTTTTATTTCCCGCccgccaaat                           >  1:15953545‑M2/1‑26 (MQ=255)
         gACAACTTCCCTGTTTTATTTCCCGCccgccaaat                           >  1:3099795‑M2/1‑26 (MQ=255)
         gACAACTTCCCTGTTTTATTTCCCGCccgccaaat                           <  1:13220325‑M2/35‑10 (MQ=255)
          aCAACTTCCCTGTTTTATTTCCCGCccgccaaatc                          <  1:6302926‑M2/35‑11 (MQ=255)
          aCAACTTCCCTGTTTTATTTCCCGCccgcaaaatc                          >  1:14582861‑M2/1‑25 (MQ=255)
           cAACTTCCCTGTTTTATTTCCCGCccgccaaatcg                         <  1:6492384‑M2/35‑12 (MQ=255)
           cAACTTCCCTGTTTTATTTCCCGCccgccaaatcg                         <  1:7627808‑M2/35‑12 (MQ=255)
           cAACTTCCCTGTTTTATTTCCCGCccgccaaatcg                         >  1:10054934‑M2/1‑24 (MQ=255)
           cAACTTCCCTGTTTTATTTCCCGCccgccaaatcg                         <  1:12310670‑M2/35‑12 (MQ=255)
            aaCTCCCCTGTTTTATTCCCCGCCCGCCAAATCGa                        <  1:12971992/35‑1 (MQ=37)
               ttCCCTGTTTTATTTCCCGCCCGCCAAATCGATaa                     <  1:19349509/35‑1 (MQ=255)
               ttCCCTGTTTTATTTCCCGCCCGCCAAATCGATaa                     >  1:11602906/1‑35 (MQ=255)
                tCCCTTTTTTATTTCCCGCCCGCCAAATCGATaaa                    <  1:17335697/35‑1 (MQ=255)
                tCCCTGTTTTATTTCCCGCCCGCCAAATCGATaac                    >  1:162905/1‑34 (MQ=255)
                tCCCTGTTTTATTCCCCGCCCGCCAAATCGATaaa                    <  1:4069600/35‑1 (MQ=255)
                  ccTGTTTTATTTCCCGCCCGCCAAATAGATAAAAc                  <  1:14774637/35‑1 (MQ=255)
                   cTGTTTTTTTCCCCGCCCGCCAAATCGATAAAACt                 <  1:6658222/35‑1 (MQ=37)
                   cTGTTTTATTTCCCGCCCGCCAAATCGATAAAACt                 >  1:10277924/1‑35 (MQ=255)
                    tGTTTTATTTCCCGCCCGCCAAATCGATAAAACtt                >  1:5652569/1‑35 (MQ=255)
                     gTTTTATTTCCCGCCCGCCAAATCGATACAACTTc               >  1:2262383/1‑35 (MQ=255)
                     gTTTTATTTCCCGCCCGCCAAATCGATAAAACTTc               >  1:12726389/1‑35 (MQ=255)
                      ttttATTTCCCGCCCGCCAAATCGATAAAACTTcc              >  1:15075048/1‑35 (MQ=255)
                      ttttATTCCCCGCCCGCCAAATCGATAAAACTTcc              <  1:3192682/35‑1 (MQ=255)
                      ttttATTCCCCCCCCGCCAAATCGATAAAACTTcc              <  1:10701527/35‑1 (MQ=38)
                      ttttATTCCCCCCCCGCCAAATCGATAAAACTTcc              <  1:2346234/35‑1 (MQ=38)
                       tttATTCCCCGCCCGCCAAATCGATAAAACTTccc             <  1:4486261/35‑1 (MQ=255)
                        ttATTCCCCGCCCGCCAAATCGATAAAACTTCCCg            <  1:9408416/35‑1 (MQ=255)
                        ttATTCCCCGCCCGCCAAATCGATAAAACTTCCCg            <  1:8630516/35‑1 (MQ=255)
                         tATTTCCCGCCCGCCAAATCGATAAAACTTCCCGt           <  1:15489799/35‑1 (MQ=255)
                         tATTTCCCGCCCGCCAAATCGATAAAACTTCCCGt           >  1:7013140/1‑35 (MQ=255)
                          ttttcCCCCccgccaaatcgcttgcgcacagtgct          >  1:17814773‑M2/2‑9 (MQ=255)
                          aTTTCACGCCCGCCAAATCGATAAAACTTCCCGTg          <  1:4407754/35‑1 (MQ=255)
                          aTTCCCCGCCCGCCAAATCGATAAAACTTCCCGTg          <  1:17113338/35‑1 (MQ=255)
                          aTTCCCCGCCCGCCAAATCGATAAAACTTCCCGTg          <  1:17063048/35‑1 (MQ=255)
                          aTTCCCCGCCCGCCAAATCGATAAAACTTCCCGTg          <  1:5391710/35‑1 (MQ=255)
                          aTTCCCCGCCCGCCAAATCGATAAAACTTCCCGTg          <  1:16888465/35‑1 (MQ=255)
                          aTTCCCCCCCCGCCAAATCGATAAAACTTCCCGTg          <  1:6376751/35‑1 (MQ=38)
                          aTTCCCCCCCCGCCAAATCGATAAAACTTCCCGTg          <  1:11237960/35‑1 (MQ=38)
                           tttCCCGCCCGCCAAATCGATAAAACTTCCCGTGa         >  1:376396/1‑35 (MQ=255)
                           tttCCCGCCCGCCAAATCGATAAAACTTCCCGTGa         >  1:16175381/1‑35 (MQ=255)
                           tttCCCCCccgccaaatcgcttgcgcacagtgctg         >  1:2148756‑M2/1‑8 (MQ=255)
                            ttCCCGCCCGCCAAATCGATAAAACTTCCCGTGAc        >  1:509488/1‑35 (MQ=255)
                            ttCCCGCCCGCCAAATCGATAAAACTTCCCGTGAc        >  1:18488909/1‑35 (MQ=255)
                            tccccgcccgCCAAATCGATAAAACTTCCCGTGAc        <  1:18905054/33‑1 (MQ=255)
                             tCCCGCCCGCCAAATCGATAAAACTTCCCGTGACg       <  1:17713695/35‑1 (MQ=255)
                             tCCCGCCCGCCAAATCGATAAAACTTCCCGTGACg       >  1:20157426/1‑35 (MQ=255)
                             tCCCGCCCGCCAAATCGATAAAACTTCCCGTGACg       >  1:12857272/1‑35 (MQ=255)
                             tCCCCCccgccaaatcgcttgcgcacagtgctgct       >  1:2608121‑M2/1‑6 (MQ=255)
                             ccccgcccgCCAAATCGATAAAACTTCCCGTGACg       <  1:18368731/34‑1 (MQ=255)
                             ccccgcccgCCAAATCGATAAAACTTCCCGTGACg       <  1:18960693/34‑1 (MQ=255)
                             ccccccccgccaaatcgcttgcgcacagtgctgct       >  1:12989173‑M2/2‑6 (MQ=255)
                              cccgcccgCCAAATCGATAAAACTTCCCGTGACGt      >  1:9035263/1‑35 (MQ=255)
                              cccgcccgCCAAATCGATAAAACTTCCCGTGACGt      >  1:17927572/1‑35 (MQ=255)
                              cccgcccgCCAAATCGATAAAACTTCCCGTGACGt      <  1:3004930/35‑1 (MQ=255)
                              cccccccgCCAAATCGATAAAACTTCCCGTGACGt      <  1:20418637/35‑1 (MQ=255)
                              cccccccgCCAAATCGATAAAACTTCCCGTGACGt      <  1:19610498/35‑1 (MQ=255)
                               tcccccgccaaatcgcttgcgcacagtgctgcttt     >  1:7075133‑M2/4‑4 (MQ=255)
                               ccgcccgcCAAATCGATAAAACTTCCCGTGACGTa     <  1:19107070/35‑1 (MQ=255)
                               ccgcccgcCAAATCGATAAAACTTCCCGTGACGTa     <  1:11397917/35‑1 (MQ=255)
                               ccgcccgcCAAATCGATAAAACTTCACGTGACGTa     <  1:12673103/35‑1 (MQ=255)
                                cgcccgccAAATCGATAAAACTTCCCGTGACGTaa    <  1:18031369/35‑1 (MQ=255)
                                cgcccgccAAATCGATAAAACTTCCCGTGACGTaa    <  1:8507075/35‑1 (MQ=255)
                                cccccgccaaatcgcttgcgcacagtgctgctttg    >  1:4156539‑M2/3‑3 (MQ=255)
                                 gcccgccAAATCGATAAAACTTCCCGTGACGTAag   >  1:14193998/1‑35 (MQ=255)
                                 gcccgccAAATCGATAAAACTTCCCGTGACGTAag   >  1:5338157/1‑35 (MQ=255)
                                 ccccgccaaatcgcttgcgaacagtgctgctttgc   >  1:15447351‑M2/2‑2 (MQ=255)
                                  cccgccaaatcgcttgcgcacagtgctgctttgcg  >  1:793290‑M2/1‑1 (MQ=255)
                                  cccgccaaatcgcttgcgcacagtgctgctttgcg  >  1:967529‑M2/1‑1 (MQ=255)
                                  cccgccAAATCGATAAAACTTCCCGTGACGTAaga  <  1:827769/35‑1 (MQ=255)
                                  cccgccAAATCGATAAAACTTCCCGTGACGTAaga  >  1:7436232/1‑35 (MQ=255)
                                  ccagccaaatcgcttgcgcacagtgctnctttgcg  >  1:15893797‑M2/1‑1 (MQ=255)
                                  |                                  
ATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGA  >  REL606/2930887‑2930955

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.