New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2650606 = | NA (NA) | 12 (0.190) | 3/30 | NT | 17.1% | noncoding (72/2906 nt) | rrlG | 23S ribosomal RNA |
? | REL606 | = 2867475 | 93 (0.910) | coding (1008/1194 nt) | ygeD | predicted inner membrane protein |
Only 100 of 363 total aligned reads displayed.
GTCAGAGGCGATGAAGGACGTGCTAATCTGCGATaagcgtcgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2650639‑2650606 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCGTCGGGGCGGGGAATGCGATTGCAGTACAAAACCTTGGC < REL606/2867475‑2867433 GTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA < 1:1552739/35‑1 GTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA < 1:17758519/35‑1 GTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA < 1:18007660/35‑1 GTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA < 1:18588884/35‑1 GTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA < 1:6365762/35‑1 GTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA < 1:19664955/35‑1 GTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA < 1:12412533/35‑1 TCAGAGGCGATGAAGGACGTGCTAATCTGCGATAA < 1:7263415/35‑1 TCAGAGGCGATGAAGGACGTGCTAATCTGCGATAA < 1:7081120/35‑1 TCAGAGGCGATGAAGGACGTGCTAATCTGCGATAA < 1:20296757/35‑1 TCAGAGGCGATGAAGGACGTGCTAATCTGCGATAA < 1:13114233/35‑1 TCAGAGGCGATGAAGGACGTGCTAATCTGCGATAA < 1:371006/35‑1 CAGAGGCGATGAAGGACGTGCTAATCTGCGATAAG < 1:16261097/35‑1 CAGAGGCGATGAAGGACGTGCTAATCTGCGATAAG < 1:13659976/35‑1 CAGAGGCGATGAAGGACGTGCTAATCTGCGATAAG < 1:9777213/35‑1 CAGAGGCGATGAAGGACGTGCTAATCTGCGATAAG < 1:9050508/35‑1 CAGAGGCGATGAAGGACGTGCTAATCTGCGATAAG > 1:794899/1‑35 CAGAGGCGATGAAGGACGTGCTAATCTGCGATAAG < 1:11912873/35‑1 CAGAGGCGATGAAGGACGTGCTAATCTGCGATAAG < 1:11642172/35‑1 AGAGGCGATGAAGGACGTGCTAATCTGCGATAAGC < 1:8378400/35‑1 AGAGGCGATGAAGGACGTGCTAATCTGCGATAAGC < 1:4940838/35‑1 AGAGGCGATGAAGGACGTGCTAATCTGCGATAAGC < 1:19730303/35‑1 AGAGGCGATGAAGGACGTGCTAATCTGCGATAAGC < 1:13775973/35‑1 AGAGGCGATGAAGGACGTGCTAATCTGCGATAAGC < 1:4258613/35‑1 GAGGCGATGAAGGACGTGCTAATCTGCGATAATCG > 1:18174351/1‑35 GAGGCGATGAAGGACGTGCTAATCTGCGATAAGCG < 1:19975399/35‑1 GAGGCGATGAAGGACGTGCTAATCTGCGATAAGCG > 1:4691862/1‑35 GAGGCGATGAAGGACGTGCTAATCTGCGATAAGCG < 1:20566492/35‑1 GAGGCGATGAAGGACGTGCTAATCTGCGATAAGCG < 1:1826025/35‑1 GAGGCGATGAAGGACGTGCTAATCTGCGATAAGCG < 1:2356533/35‑1 GAGGCGATGAAGGACGTGCTAATCTGCGATAAGCG > 1:9399589/1‑35 GAGGCGATGAAGGACGTGCTAATCTGCGATAAGCG < 1:3875202/35‑1 GAGGCGATGAAGGACGTGCTAATCTGCGATAAGCG < 1:103095/35‑1 GAGGCGATGAAGGACGTGCTAATCTGCGATAAGCG < 1:1117821/35‑1 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT > 1:20403234/1‑35 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT < 1:12996827/35‑1 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT > 1:12830772/1‑35 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT < 1:13872144/35‑1 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT < 1:19239002/35‑1 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT > 1:2954650/1‑35 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT < 1:4565994/35‑1 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT < 1:5841658/35‑1 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT > 1:5983831/1‑35 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT < 1:7755640/35‑1 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT < 1:8894349/35‑1 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT < 1:15884361/35‑1 AGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT > 1:16533362/1‑35 gaCGATGAAGGACGTGCTAATCTGCGATAAGCGTC < 1:6215362/33‑1 GGCGATGAAGGACGTGCTAATCTGCGATAAGCGTC > 1:8779448/1‑35 GGCGATGAAGGACGTGCTAATCTGCGATAAGCGTC < 1:13525907/35‑1 GGCGATGAAGGACGTGCTAATCTGCGATAAGCGTC < 1:14987253/35‑1 GCGATGAAGGACTTGCTAATCTGCGATAAGCGTCG < 1:2748293/35‑1 GCGATGAAGGACGTGCTAATCTGCGATAAGCGTCG < 1:9612169/35‑1 GCGATGAAGGACGTGCTAATCTGCGATAAGCGTCG > 1:15791069/1‑35 GCGATGAAGGACGTGCTAATCTGCGATAAGCGTCG > 1:14008505/1‑35 GCGATGAAGGACGTGCTAATCTGCGATAAGCGTCG < 1:11991905/35‑1 GCGATGAAGGACGTGCTAATCTGCGATAAGCGTCG > 1:14572487/1‑35 GCGATGAAGGACGTGCTAATCTGCGATAAGCGTCG > 1:11278302/1‑35 GCGATGAAGGACGTGCTAATCTGCGATAAGCGTCG > 1:7377476/1‑35 CGATGAAGGACGTGCTAATCTGCGATAAGCGTCtg > 1:9144504/1‑33 CGATGAAGGACGTGCTAATCTGCGATAAGCGTCGG < 1:3616070/35‑1 CGATGAAGGACGTGCTAATCTGCGATAAGCGTCGG > 1:10102007/1‑35 CGATGAAGGACGTGCTAATCTGCGATAAGCGTCGG > 1:16985645/1‑35 CGATGAAGGACGTGCTAATCTGCGATAAGCGTCGG < 1:20254299/35‑1 CGATGAAGGACGTGCTAATCTGCGATAAGCGTCGG > 1:15308215/1‑35 CGATGAAGGACGTGCTAATCTGCGATAAGCGTCGG < 1:14066070/35‑1 CGATGAAGGACGTGCTAATCTGCGATAAGCGTCGG < 1:14720972/35‑1 CGATGAAGGACGTGCTAATCTGCGATAAGCGTCGG > 1:1612883/1‑35 GATGAAGGACGTGCTAATCTGCGATAAGCGTCGGa > 1:9584369/1‑34 GATGAAGGACGTGCTAATCTGCGATAAGCGTCGGG > 1:17128849/1‑35 GATGAAGGACGTGCTAATCTGCGATAAGCGTCGGG > 1:10455342/1‑35 GATGAAGGACGTGCTAATCTGCGATAAGCGTCGGG > 1:16723042/1‑35 GATGAAGGACGTGCTAATCTGCGATAAGCGTCGGG > 1:11448400/1‑35 GATGAAGGACGTGCTAATCTGCGATAAGCGTCGGG > 1:15105867/1‑35 GATGAAGGACGTGCTAATCTGCGATAAGCGTCGGG > 1:3355192/1‑35 ATGAATGACGTGCTAATCTGCGATAAGCGTCGGGa > 1:6869580/1‑34 ATGAAGGACGTGCTAATCTGCGATAAGCGTCGGGa > 1:5226757/1‑34 ATGAAGGACGTGCTAATCTGCGATAAGCGTCGGGa > 1:14828622/1‑34 ATGAAGGACGTGCTAATCTGCGATAAGCGTCGGGG > 1:12305420/1‑35 ATGAAGGACGTGCTAATCTGCGATAAGCGTCGGGG > 1:13278958/1‑35 TGAAGGACGTGCTAATCTGCGATAAGCGTCGGcta > 1:5462181/1‑32 TGAAGGACGTGCTAATCTGCGATAAGCGTCGGGaa > 1:18998605/1‑33 TGAAGGACGTGCTAATCTGCGATAAGCGTCGGGaa > 1:8152588/1‑33 TGAAGGACGTGCTAATCTGCGATAAGCGTCGGGGg > 1:14317309/1‑34 TGAAGGACGTGCTAATCTGCGATAAGCGTCGGGGg > 1:12574822/1‑34 GAAGGACGTGCTAATCTGCGATAAGCGTCGGGaag > 1:10067482/1‑32 AAGGACGTGCTAATCTGCGATAAGCGTCGGGGAGG > 1:2230661/1‑35 GGACGTGCTAATCTGCGATAAGCGTCGGGGGGGGG > 1:17329662/1‑35 GGACGTGCTAATCTGCGATAAGCGTCGGGGGGGGG > 1:16006029/1‑35 AAGCGTCGGGGCGGGGAATGCGATTGCAGTACAAA > 1:17819860/1‑35 AGCGTCGGGGCGGGGAATGCGATTGCAGTACAAAA < 1:6548258/35‑1 GCGTCGGGGCGGGGAATGCGATTGCAGTACAAAAC < 1:16594285/35‑1 GCGTCGGGGCGGGGAATGCGATTGCAGTACAAAAC < 1:12179489/35‑1 CGTCGGGGCGGGGAATGCGATTGCAGTACAAAACC < 1:10990655/35‑1 GTCGGGGCGGGGAATGCGATTGCAGTACAAAACCT < 1:17572778/35‑1 GTCGGGGCGGGGAATGCGATTGCAGTACAAAACCT < 1:19442405/35‑1 GTCGGGGCGGGGAATGCGATTGCAGTAAAAAACCT > 1:18350187/1‑35 GGGGCGGGGAATGCGATTGCAGTACAAAATCTTGG < 1:669354/35‑1 GGGGCGGGGAATGCGATTGCAGTACAAAACCTTGG < 1:5773905/35‑1 GGGCGGGGAATGCGATTGCAGTACAAAACCTTGGC < 1:10833104/35‑1 GTCAGAGGCGATGAAGGACGTGCTAATCTGCGATaagcgtcgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2650639‑2650606 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCGTCGGGGCGGGGAATGCGATTGCAGTACAAAACCTTGGC < REL606/2867475‑2867433 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |