New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 82013 = | 70 (0.680) | 10 (0.160) | 3/30 | NT | 19.5% | coding (245/606 nt) | leuD | isopropylmalate isomerase small subunit |
? | REL606 | 3792209 = | 39 (0.610) | coding (315/414 nt) | ECB_03532 | hypothetical protein |
Only 100 of 125 total aligned reads displayed.
ACGACACGCCGAACGAGCCGAACCGCTTCGGCTGGGTGGGGGAAATCGATCCATATGGTTATTTTTC > REL606/3792175‑3792241 | cttccattttgctggcacgagaaaacttcggctgg > 1:918764‑M2/35‑35 (MQ=255) cttccattttgctggcacgagaaaacttcggctgg > 1:2336841‑M2/35‑35 (MQ=255) cttccattttgctggcacgagaaaacttcggctgg > 1:16785434‑M2/35‑35 (MQ=255) cctgttcctgcaatacacgcagcaacttcggctgg > 1:2850767‑M2/35‑35 (MQ=255) cctgttcctgcaatacacgcagcaacttcggctgg > 1:16245809‑M2/35‑35 (MQ=255) acgacACGCCGAACGAGCCGAACCGCTTCGGCtgg > 1:9939749/1‑35 (MQ=255) acgacACGCCGAACGAGCCGAACCGCTTCGGCtgg > 1:8534597/1‑35 (MQ=255) acgacACGCCGAACGAGCCGAACCGCTTCGGCtgg > 1:11614060/1‑35 (MQ=255) ttccattttgctggcacgagaaaacttcggctggg > 1:2513761‑M2/34‑35 (MQ=255) ctgttcctgcaatacacgcagcaacttcgggtggg > 1:824909‑M2/34‑35 (MQ=255) ctgttcctgcaatacacgcagcaacttcggctggg > 1:6090207‑M2/34‑35 (MQ=255) tgttcctgcaatacacgcagcaacttcggctgggg > 1:18518801‑M2/33‑34 (MQ=255) tgttcctgcaatacacgcagcaacttcggctgggg > 1:13227504‑M2/33‑34 (MQ=255) tgttcctgcaatacacgcagcaacttcggctgggg > 1:10015394‑M2/33‑34 (MQ=255) tccattttgctggcacgagaaaacttcggctgggg > 1:9638748‑M2/33‑34 (MQ=255) tccattttgctggcacgagaaaacttcggctgggg > 1:786004‑M2/33‑34 (MQ=255) gacACGCCGAACGAGCCTAACCGCTTCGGCtgggg > 1:7252879/1‑34 (MQ=255) gttcctgcaatacacgcagcaacttcggctggggg > 1:19564377‑M2/32‑33 (MQ=255) gttcctgcaatacacgcagcaacttcggctggggg > 1:9537169‑M2/32‑33 (MQ=255) gttcctgcaatacacgcagcaacttcggctggggg > 1:20240763‑M2/32‑33 (MQ=255) gttcctgcaatacacgcagcaacttcggctggggg > 1:2466318‑M2/32‑33 (MQ=255) gttcctgcaatacacgcagcaacttcggctggggg > 1:16889909‑M2/32‑33 (MQ=255) gttcctgcaatacacgcagcaacttcggctggggg > 1:5513499‑M2/32‑33 (MQ=255) gttcctgcaatacacgcagcaacttcggctggggg > 1:4080564‑M2/32‑33 (MQ=255) gttcctgcaatacacgcagcaacttcggctgggac > 1:14853295‑M2/32‑33 (MQ=255) acccGCCAAAGGAGCCGAACCGCTTCGGCtgggtg < 1:960394/32‑1 (MQ=25) acacGCAGAGGGAGCCGAACCGCTTCGGCtgggtg < 1:5288907/35‑1 (MQ=25) ttcctgcaatacacgcagcaacttcggctgggggg > 1:16037633‑M2/31‑35 (MQ=255) ttcctgcaatacacgcagcaacttcggctgggggg > 1:2765371‑M2/31‑35 (MQ=255) ttcctgcaatacacgcagcaacttcggctgggggg > 1:11644745‑M2/31‑35 (MQ=255) ttcctgcaatacacgcagcaacttcggctgggggg > 1:10455857‑M2/31‑35 (MQ=255) cattttgctggcacgagaaaacttcggctgggggg > 1:3844906‑M2/31‑35 (MQ=255) cattttgctggcacgagaaaacttcggctggggcg > 1:1234235‑M2/31‑32 (MQ=255) cacGCCGAACGAGCCGAACCGCTTCGGCtgggtgg > 1:13032628/1‑35 (MQ=255) tcctgcaatacacgcagcaacttcggctggggggg > 1:10416438‑M2/30‑35 (MQ=255) attttgctggcacgagaaaacttcggctggggggg > 1:3322749‑M2/30‑35 (MQ=255) attttgctggcacgagaaaacttcggctggggggg > 1:5622200‑M2/30‑35 (MQ=255) attttgctggcacgagaaaacttcggctggggggg > 1:19010381‑M2/30‑35 (MQ=255) attttgctggcacgagaaaacttcggctggggggc > 1:1756571‑M2/30‑34 (MQ=255) attttgctggcacgagaaaacttcggctggggggc > 1:18153296‑M2/30‑34 (MQ=255) ttttgctggcacgagaaaacttcggctgggggggc > 1:835127‑M2/29‑34 (MQ=255) ttttgctggcacgagaaaacttcggctgGGGgggg > 1:9385579‑M2/29‑35 (MQ=255) cctgcaatacacgcagcaacttcggctgggggggc > 1:6666308‑M2/29‑34 (MQ=255) cctgcaatacacgcagcaacttcggctgGGGgggg > 1:7629614‑M2/29‑35 (MQ=255) cctgcaatacacgcagcaacttcggctgGGGgggg > 1:1977314‑M2/29‑35 (MQ=255) tttgctggcacgagaaaacttcggctgGGGggggg > 1:16490765‑M2/28‑35 (MQ=255) tttgctggcacgagaaaacttcggctgGGGggggg > 1:8243624‑M2/28‑35 (MQ=255) ctgcaatacacgcagcaacttcggctgGGgggggc > 1:20130144‑M2/28‑34 (MQ=255) ctgcaatacacgcagcaacttcggctgGGGggggg > 1:15418527‑M2/28‑35 (MQ=255) ctgcaatacacgcagcaacttcggctgGGGggggg > 1:7583785‑M2/28‑35 (MQ=255) ctgcaatacacgcagcaacttcggctgGGGggggg > 1:340565‑M2/28‑35 (MQ=255) ttgctggcacgagaaaacttcggctgGGggggggc > 1:3193025‑M2/27‑34 (MQ=255) tgcaatacacgcagcaacttcggctgGGggggggg > 1:6476069‑M2/27‑34 (MQ=255) tgcaatacacgcagcaacttcggctgGGggggggg > 1:11034453‑M2/27‑34 (MQ=255) tgcaatacacgcagcaacttcggctgGGggggggg > 1:14210332‑M2/27‑34 (MQ=255) tgcaatacacgcagcaacttcggctgGGGGGGGGa > 1:1190238‑M2/27‑35 (MQ=255) ccGAACGAGCCGAACCGCTTCGGCTGGGTgggggg > 1:2820041/1‑34 (MQ=255) ccGAACGAGCCGAACCGCTTCGGCTGGGGGGGGGa > 1:9155747/1‑35 (MQ=255) cGAACGAGCCGAACCGCTTCGGCTGGGGGGGGGaa > 1:18699225/1‑35 (MQ=255) gAACGAGCCGAACCGCTTCGGCTGGGTGGGGGaaa > 1:12298654/1‑35 (MQ=255) gAACGAGCCGAACCGCTTCGGCTGGGGGGGGGgaa > 1:8077121/1‑35 (MQ=37) aaggAGCCGACCCGCTTCGGCTGGGTGGGGGAAAt < 1:13064332/32‑1 (MQ=37) aaCGAGCCGAACCGCTTCGGCTGGGGGGGGGgaaa > 1:15908225/1‑34 (MQ=37) gggAGCCGAACCGCTTCGGCTGGGTGGGGGAAATc < 1:12923334/33‑1 (MQ=255) ggcgCCGACCCGCTTCGGCTGGGTGGGGGAAATCg < 1:3622572/32‑1 (MQ=37) ggAGCCGACCCGCTTCGGCTGGGTGGGGGAAATCg < 1:2447458/34‑1 (MQ=255) ggAGCCGAACCGCTTCGGCTGGGTGGGGGAAATCg < 1:1920529/34‑1 (MQ=255) gAGCCGACCCGCTTCGGCTGGGTGGGGGAAATCGa < 1:5675628/35‑1 (MQ=255) gAGCCGAACCGCTTCGGCTGGGTGGGGGGAATCGa > 1:4459277/1‑35 (MQ=255) gAGCCAACCCGCTTCGGCTGGGTGGGGGAAATCGa < 1:13010300/35‑1 (MQ=37) ggCCGACCCGCTTCGGCTGGGTGGGGGAAATCGAt < 1:13177454/34‑1 (MQ=255) cgCCGAACCGCTTCGGCTGGGTGGGGGAAATCGAt < 1:13566971/34‑1 (MQ=255) aGCCGAACCGCTTCGGCTGGGTGGGGGAAATCGAt < 1:4253547/35‑1 (MQ=255) gCCGACCCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:15226902/35‑1 (MQ=255) gCCGACCCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:4326598/35‑1 (MQ=255) gCCGACCCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:9395103/35‑1 (MQ=255) gCCGAACCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:11776566/35‑1 (MQ=255) gCCGAACCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:7635466/35‑1 (MQ=255) gCCGAACCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:7309175/35‑1 (MQ=255) gCCGAACCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:6225987/35‑1 (MQ=255) cccGACCCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:4511805/34‑1 (MQ=255) cGACCCGCTTCGGCTGGGTGGGGGAAATCGATCCa < 1:14565636/35‑1 (MQ=255) cGAACCGCTTCGGCTGGGTGGGGGAAATCGATCCa < 1:19226551/35‑1 (MQ=255) gAACCGCTTCGGCTGGGTGGGGGAAATCGATCCat < 1:7739794/35‑1 (MQ=255) gAACCGCTTCGGCTGGGTGGGGGAAATCGATCCat < 1:11484526/35‑1 (MQ=255) ccccGCGTCGGCTGGGTGGGGGAAATCGATCCata < 1:7497031/33‑1 (MQ=37) acccGCTTCGGCTGGGTGGGGGAAATCGATCAata < 1:19852086/33‑1 (MQ=37) aCCGCTTCGGCTGGGTGGGGGAAATCGATCCatat < 1:6638331/35‑1 (MQ=255) aCCGCTTCGGCTGGGTGGGGGAAATCGATCCatat < 1:791244/35‑1 (MQ=255) aCCGCTTCGGCTGGGTGGGGGAAATCGATCCatat > 1:4075402/1‑35 (MQ=255) aCCGCTTCGGCTGGGTGGGGGAAATCGATCCatat < 1:10312132/35‑1 (MQ=255) aCCGCTTCGGCTGGGGGGGGGAAATCGATCCatat > 1:14054381/1‑35 (MQ=255) ccGCTTCGGCTGGGTGGGGGAAATCGATCCATATg < 1:13865754/35‑1 (MQ=255) cGCTTCGGCTGGGTGGGGGAAATCGATCCATATgg < 1:4447347/35‑1 (MQ=255) cGCTTCGGCTGGGTGGGGGAAATCGATCCATATgg < 1:4640023/35‑1 (MQ=255) gCTTCGGCTGGGTGGGGGAAATCGATCCATATGGt < 1:15463170/35‑1 (MQ=255) gCTTCGGCTGGGTGGGGGAAATCGATCCATATGGt < 1:4870360/35‑1 (MQ=255) cttcggctgGGTGGGGGAAATCGATCCATATGGtt < 1:13310591‑M2/26‑1 (MQ=255) ttcggctgGGTGGGGGAAATCGATCCATATGGTTa < 1:18615751‑M2/27‑1 (MQ=255) caggtggtGGAAATCGATCCATATGGTTATTTTTc > 1:19305838/3‑35 (MQ=38) | ACGACACGCCGAACGAGCCGAACCGCTTCGGCTGGGTGGGGGAAATCGATCCATATGGTTATTTTTC > REL606/3792175‑3792241 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |