New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 469267 = | 124 (1.210) | 5 (0.060) | 3/42 | NT | 4.9% | coding (26/645 nt) | adk | adenylate kinase |
? | REL606 | 2766488 = | 87 (0.970) | coding (154/480 nt) | ispF | 2‑C‑methyl‑D‑erythritol 2,4‑cyclodiphosphate synthase |
Only 100 of 178 total aligned reads displayed.
TCCGGGAACAGCTTGCCGATATCCCCCAGCGCCGCCGCGCCAAGCAATGCATCGGTCAACGCATGGAGC > REL606/2766454‑2766522 | tCCGGGAACAGCTTGCCGATATCCCCCAGcgccgc < 1:10300148/35‑1 (MQ=255) tCCGGGAACAGCTTGCCGATATCCCCCAGcgccgc < 1:8564351/35‑1 (MQ=255) cccGGGAACAGCTTGCCGATATCCCCCAGcgccgc < 1:20541225/34‑1 (MQ=255) ccGGGAACAGCTTGCCGATATCCCCCAGcgccgcc > 1:778684/1‑35 (MQ=255) ccGGGAACAGCTTGCCGATATCCCCCAGcgccgcc > 1:2856301/1‑35 (MQ=255) cGGGAACAGCTTGCCGATATCCCCCAGcgccgccg > 1:16938959/1‑35 (MQ=255) cGGGAACAGCTTGCCGATATCCCCCAGcgccgccg > 1:15564538/1‑35 (MQ=255) cGGGAACAGCTTGCCGATATCCCCCAGcgccgccg > 1:13858552/1‑35 (MQ=255) cGGGAACAGCTTGCCGATATCCCCCAGcgccgccg > 1:4330832/1‑35 (MQ=255) gggAACAGCTTGCCGATATCCCCCAGcgccgccgc > 1:3470230/1‑35 (MQ=255) gggAACAGCTTGCCGATATCCCCCAGcgccgccgc > 1:10136305/1‑35 (MQ=255) ggAACAGCTTGCCGATATCCCCCAGCGCCGCcgcg > 1:15037652/1‑35 (MQ=255) ggAACAGCTTGCCGATATCCCCCAGCGCCGCcgcg > 1:10965252/1‑35 (MQ=255) gAACAGCTTGCCGATATCCCCCAGCGCCGCCgcgc < 1:15460916/35‑1 (MQ=255) gAACAGCTTGCCGATATCCCCCAGCGCCGCCgcgc > 1:11857262/1‑35 (MQ=255) aaCAGCTTGCCGATATCCCCCAGCGCCGCCGCGcc > 1:4092949/1‑35 (MQ=255) aCAGCTTGCCGATATCCCCCAGCGCCGCCGCGCCa > 1:18814564/1‑35 (MQ=255) aCAGCTTGCCGATATCCCCCAGCGCCGCCGCGCCa > 1:13838991/1‑35 (MQ=255) aCAGCTTGCCGATATCCCCCAGCGCCGCCGCGCCa > 1:4429117/1‑35 (MQ=255) aCAGCTTGCCGATATCCCCCAGCGCCGCCGCGCCa > 1:7365430/1‑35 (MQ=255) cAGCTTGCCGATATCCCCCAGCGCCGCCGCGCCaa > 1:11500955/1‑35 (MQ=255) cAGCTTGCCGATATCCCCCAGCGCCGCCGCGCCaa > 1:12913300/1‑35 (MQ=255) cAGCTTGCCGATATCCCCCAGCGCCGCCGCGCCaa > 1:8581319/1‑35 (MQ=255) aGCTTGCCGATATCCCCCAGCGCCGCCGCGCCAAg > 1:13888525/1‑35 (MQ=255) gCTTGCCGATATCCCCCAGCGCCGCCGCGCCAAGc > 1:1424046/1‑35 (MQ=255) gCTTGCCGATATCCCCCAGCGCCGCCGCGCCAAGc > 1:3283069/1‑35 (MQ=255) gCTTGCCGATATCCCCCAGCGCCGCCGCGCCAAGc > 1:19695047/1‑35 (MQ=255) cTTGCCGATATCCCCCAGCGCCGCCGCGCCAAGCa > 1:10654294/1‑35 (MQ=255) cTTGCCGATATCCCCCAGCGCCGCCGCGCCAAGCa > 1:18537621/1‑35 (MQ=255) ttGCCGATATCCCCCAGCGCCGCCGCGCCAAGCaa > 1:3705317/1‑35 (MQ=255) ttGCCGATATCCCCCAGCGCCGCCGCGCCAAGCaa > 1:14789466/1‑35 (MQ=255) ttGCCGATATCCCCCAGCGCCGCCGCGCCAAGCaa > 1:7674148/1‑35 (MQ=255) tGCCGATATCCCCCAGCGCCGCCGCGCCCAGCCAt > 1:20282139/1‑35 (MQ=25) tGCCGATATCCCCCAGCGCCGCCGCGCCAAGCAAt > 1:7328696/1‑35 (MQ=255) tGCCGATATCCCCCAGCGCCGCCGCGCCAAGCAAt > 1:7471898/1‑35 (MQ=255) gCCGATATCCCCCAGCGCCGCCGCGCCAAGCAATg > 1:944860/1‑35 (MQ=255) gCCGATATCCCCCAGCGCCGCCGCGCCAAGCAATg > 1:12123761/1‑35 (MQ=255) cGATATCCCCCAGCGCCGCCGCGCCAAGCAATGCa > 1:16094906/1‑35 (MQ=255) cGATATCCCCCAGCGCCGCCGCGCCAAGCAATGCa > 1:13075949/1‑35 (MQ=255) cGATATCCCCCAGCGCCGCCGCGCCAAGCAATGCa > 1:18778277/1‑35 (MQ=255) gATATCCCCCAGCGCCGCCGCGCCAAGCAATGCAt > 1:691730/1‑35 (MQ=255) gATATCCCCCAGCGCCGCCGCGCCAAGCAATGCAt > 1:4612421/1‑35 (MQ=255) gATATCCCCCAGCGCCGCCGCGCCAAGCAATGCAt > 1:15770725/1‑35 (MQ=255) atatCCCCCAGCGCCGCCGCGCCAAGCAATGCATc > 1:10659127/1‑35 (MQ=255) tcccccccAGCGCCGCCGCGCCAAGCAATGCATCg < 1:7228087/32‑1 (MQ=255) tatCCCCCAGCGCCGCCGCGCCAAGCAATGCATCg > 1:7500800/1‑35 (MQ=255) tatCCCCCAGCGCCGCCGCGCCAAGCAATGCATCg > 1:20334900/1‑35 (MQ=255) accccccCGCCCCGCCGCGCCAAGCAATGGATCgg < 1:6800131/33‑1 (MQ=21) accccccACCGCCGCCGCGCCAAGCAATGCATCgg < 1:4336727/33‑1 (MQ=37) tCCCCCAGCGCCGCCGCGCCAAGCAATGCATCGGt > 1:4828622/1‑35 (MQ=255) ccccccGGCGCCGCCGCGCCAAGAAATGCATCGGt < 1:17824023/34‑1 (MQ=25) cccccAGCGCCGCCGCGCCAAGCAATGCATCGGTc > 1:4827115/1‑35 (MQ=255) cccccACCCCCGCCGCGCCAAGCAATGCATCGGTc < 1:4159105/35‑1 (MQ=37) cccccACCCCCGCCGCGCCAAGCAATGCATCGGTc < 1:14432931/35‑1 (MQ=37) ccccgcggccgCCGCGCCAAGCAATGCATCGGTCa < 1:19522007‑M2/24‑1 (MQ=255) ccccAGCGCCGCCGCGCCAAGCAATGCATCGGTCa > 1:3894453/1‑35 (MQ=255) ccccAGCCCCGCCGCGCCAAGCAATGCATCGGTCa < 1:3663413/35‑1 (MQ=255) ccccAGCCCCGCCGCGCCAAGCAATGCATCGGTCa < 1:16631498/35‑1 (MQ=255) ccccACCCCCGCCGCGCCAAGCAATGCATCGGTCa < 1:6299176/35‑1 (MQ=37) cccgcccccgCCGCGCCAAGCAATGCATCGGTCaa < 1:18273417‑M2/25‑1 (MQ=255) cccacgcccgCCGCGCCAAGCAATGCATCGGTCaa < 1:5838443‑M2/25‑1 (MQ=255) cccGGCGCCGCCGCGCCAAGCAATGCATCGGTCaa < 1:6491002/35‑1 (MQ=255) cccAGCGCCGCCGCGCCAAGCAATGCATCGGTCaa < 1:12187806/35‑1 (MQ=255) ccAGCGCCGCCGCGCCAAGCAATGCATCGGTCAAc > 1:15300958/1‑35 (MQ=255) ccAGCGCCGCCGCGCCAAGCAATGCATCGGTCAAc < 1:19151974/35‑1 (MQ=255) ccAGCCCCGCCGCGCCAAGCAATGCATCGGTCAAc < 1:18121520/35‑1 (MQ=255) ccAGCCCCGCCGCGCCAAGCAATGCATCGGTCAAc < 1:6153335/35‑1 (MQ=255) cgcccccgCCGCGCCAAGCAATGCATCGGTCAACg < 1:2906925‑M2/27‑1 (MQ=255) ccgcgcCGCCGCGCCAAGCAATGCATCGGTCAACg < 1:20296129/33‑1 (MQ=255) cAGCGCCGCCGCGCCAAGCAATGCATCGGTCAACg > 1:15151821/1‑35 (MQ=255) cAGCCCCGCCGCGCCAAGCAATGCATCGGTCAACg < 1:7159558/35‑1 (MQ=255) ccccccgCCGCGCCAAGCAATGCATCGGTCAACGc < 1:12606907‑M2/28‑1 (MQ=255) aGCGCCGCCGCGCCAAGCAATGCATCGGTCAACGc < 1:2153595/35‑1 (MQ=255) cccccgCCGCGCCAAGCAATGCATCGGTCAACGCa < 1:12646957‑M2/29‑1 (MQ=255) cccccgCCGCGCCAAGCAATGCATCGGTCAACGCa < 1:17789710‑M2/29‑1 (MQ=255) cgccgccgcGCCAAGCAATGCATCGGTCAACGCAt > 1:10179521/1‑35 (MQ=255) cgccgccgcGCCAAGCAATGCATCGGTCAACGCAt > 1:5702398/1‑35 (MQ=255) cgccgccgcGCCAAGCAATGCATCGGTCAACGCAt > 1:12716613/1‑35 (MQ=255) ccccgCCGCGCCAAGCAATGCATCGGTCAACGCAt < 1:15994825‑M2/30‑1 (MQ=255) ccccgCCGCGCCAAGCAATGCATCGGTCAACGCAt < 1:2218111‑M2/30‑1 (MQ=255) gccgccgcGCCAAGCAATGCATCGGTCAACGCATg > 1:4903226/1‑35 (MQ=255) gccgccgcGCCAAGCAATGCATCGGTCAACGCATg > 1:10404687/1‑35 (MQ=255) gccgccgcGCCAAGCAATGCATCGGTCAACGCATg > 1:14626169/1‑35 (MQ=255) gccgccgcGCCAAGCAATGCATCGGTCAACGCATg > 1:19596229/1‑35 (MQ=255) cccgCCGCGCCAAGCAATGCATCGGTCAACGCATg < 1:8821775‑M2/31‑1 (MQ=255) cccgCCGCGCCAAGCAATGCATCGGTCAACGCATg < 1:19941021‑M2/31‑1 (MQ=255) cccgCCGCGCCAAGCAATGCATCGGTCAACGCATg < 1:7111002‑M2/31‑1 (MQ=255) ccgCCGCGCCAAGCAATGCATCGGTCAATGCATgg < 1:17383741‑M2/32‑1 (MQ=255) ccgCCGCGCCAAGCAATGCATCGGTCAACGCATgg < 1:15857273‑M2/32‑1 (MQ=255) ccgCCGCGCCAAGCAATGCATCGGTCAACGCATgg < 1:8159953‑M2/32‑1 (MQ=255) cgCCGCGCCAAGCAATGCATCGGTCAACGCATGGa > 1:5206887‑M2/3‑35 (MQ=255) cgCCGCGCCAAGCAATGCATCGGTCAACGCATGGa < 1:9607184‑M2/33‑1 (MQ=255) gCCGCGCCAAGCAATGCATCGGTCAACGCATGGAg > 1:19985029‑M2/2‑35 (MQ=255) gCCGCGCCAAGCAATGCATCGGTCAACGCATGGAg < 1:19845236‑M2/34‑1 (MQ=255) gCCGCGCCAAGCAATGCATCGGTCAACGCATGGAg > 1:7652317‑M2/2‑35 (MQ=255) gCCGCGCCAAGCAATGCATCGGTCAACGCATGGAg > 1:1375961‑M2/2‑35 (MQ=255) ccgcGCCAAGCAATGCATCGGTCAACGCATGGAgc < 1:2131549/35‑1 (MQ=255) ccgcGCCAAGCAATGCATCGGTCAAAGCATGGAgc < 1:2626450/35‑1 (MQ=255) ccgcGCCAAGCAATGCATCAGTCAACGCATGGAgc < 1:7628093/35‑1 (MQ=255) ccgcGCCAAGCAATGCATAGGTCAACGCATGGAgc < 1:3199833/35‑1 (MQ=255) | TCCGGGAACAGCTTGCCGATATCCCCCAGCGCCGCCGCGCCAAGCAATGCATCGGTCAACGCATGGAGC > REL606/2766454‑2766522 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |