New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1430232 = | 98 (0.950) | 7 (0.100) | 3/34 | NT | 10.1% | coding (2159/3525 nt) | ydbK | fused predicted pyruvate‑flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein |
? | REL606 | 3284457 = | 55 (0.760) | coding (588/729 nt) | mtgA | monofunctional biosynthetic peptidoglycan transglycosylase |
Only 100 of 204 total aligned reads displayed.
CATATCACGCGATTTCACATCCAGCGAATGCAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCAGGCGGCAC > REL606/1430198‑1430266 | cgcgagcaaacttacccggtcggaagctgcattac > 1:3252691‑M1/35‑35 (MQ=255) cATATCACGCGATTTCACATCCAGCGAATGCATGc > 1:2653162/1‑35 (MQ=255) cATATCACGCGATTTCACATCCAGCGAATGCAGGc > 1:2005849/1‑35 (MQ=255) cATATCACGCGATTTCACATCCAGCGAATGCAGGc > 1:15210549/1‑35 (MQ=255) gcgagcaaacttacccggtcggaagctgcattaCt > 1:2096822‑M1/34‑35 (MQ=255) gcgagcaaacttacccggtcggaagctgcattaCt > 1:15842880‑M1/34‑35 (MQ=255) gcgagcaaacttacccggtcggaagctgcattaCt < 1:13552841‑M1/2‑1 (MQ=255) gcgagcaaacttacccggtcggaagctgcattaCt > 1:5979425‑M1/34‑35 (MQ=255) atatCACGCGATTTCACATCCAGCGAATGCAGGCt > 1:366103/1‑35 (MQ=255) atatCACGCGATTTCACATCCAGCGAATGCAGGCt > 1:15549278/1‑35 (MQ=255) tatCACGCGATTTCACATCCAGCGAATGCAGGCTg < 1:11451461/35‑1 (MQ=255) tatCACGCGATTTCACATCCAGCGAATGCAGGCTg < 1:824887/35‑1 (MQ=255) tatCACGCGATTTCACATCCAGCGAATGCAGGCTg > 1:5698180/1‑35 (MQ=255) tatCACGCGATTTCACATCCAGCGAATGCAGGCTg > 1:4995687/1‑35 (MQ=255) cgagcaaacttacccggtcggaagctgcattaCTg > 1:10911669‑M1/33‑35 (MQ=255) gagcaaacttacccggtcggaagctgcattaCTgg > 1:4037507‑M1/32‑35 (MQ=255) gagcaaacttacccggtcggaagctgcattaCTgg < 1:3111844‑M1/4‑1 (MQ=255) gagcaaacttacccggtcggaagctgcattaCTgg < 1:1663586‑M1/4‑1 (MQ=255) gagcaaacttacccggtcggaagctgcattaCTgg < 1:14126373‑M1/4‑1 (MQ=255) tCACGCGATTTCACATCCAGCGAATGCAGGCTGGc < 1:2473555/35‑1 (MQ=255) tCACGCGATTTCACATCCAGCGAATGCAGGATGGc < 1:3532594/35‑1 (MQ=255) agcaaacttacccggtcggaagctgcattactgag < 1:15035378‑M1/5‑3 (MQ=255) agcaaacttacccggtcggaagctgcattaCTGGc > 1:2958199‑M1/31‑35 (MQ=255) agcaaacttacccggtcggaagctgcattaCTGGc > 1:19910512‑M1/31‑35 (MQ=255) gcaaacttacgcggtcggaagctgcattaCTGGCa > 1:2861085‑M1/30‑35 (MQ=255) gcaaacttacccggtcggaagctgcattaCTGGCa < 1:8360080‑M1/6‑1 (MQ=255) gcaaacttacccggtcggaagctgcattaCTGGCa < 1:16337035‑M1/6‑1 (MQ=255) cACGCGATTTCACATCCAGCGAATGCAGGCTGGCa > 1:7695164/1‑35 (MQ=255) cACGCGATTTCACATCCAGCGAATGCAGGCTGGCa < 1:15937111/35‑1 (MQ=255) cACGCGATTTCACATCCAGCGAATGCAGGCTGGCa > 1:16003923/1‑35 (MQ=255) cACGCGATTTCACATCCAGCGAATGCAGGCTGGCa > 1:4213372/1‑35 (MQ=255) caaacttacccggtcggaagctgcattaCTGGCA‑g < 1:2684527‑M1/7‑1 (MQ=255) caaacttacccggtcggaagctgcattaCTGGCA‑g > 1:459299‑M1/29‑35 (MQ=255) caaacttacccggtcggaagctgcattaCTGGCA‑g < 1:4536649‑M1/7‑1 (MQ=255) caaacttacccggtcggaagctgcattaCTGGCA‑g < 1:5755216‑M1/7‑1 (MQ=255) aCGCGATTTCACATCCAGCGAATGCAGGCTGGCA‑g > 1:3133427/1‑35 (MQ=255) aCGCGATTTCACATCCAGCGAATGCAGGCTGGCA‑g < 1:18182846/35‑1 (MQ=255) aCGCGATTTCACATCCAGCGAATGCAGGCTGGCA‑g < 1:4737667/35‑1 (MQ=255) aCGCGATTTCACATCCAGCGAATGCAGGCTGGCA‑g > 1:5344807/1‑35 (MQ=255) cgcgATTTCACATCCAGCGAATGCAGGCTGGCA‑gg < 1:9636445/35‑1 (MQ=255) cgcgATTTCACATCCAGCGAATGCAGGCTGGCA‑gg > 1:12429210/1‑35 (MQ=255) aaacttacccggtcggaagctgcattaCTGGCA‑gg < 1:16878466‑M1/8‑1 (MQ=255) gcgATTTCCCATCCAGCGAATGCAGGCTGGCA‑ggg < 1:9485427/35‑1 (MQ=255) cgATTTCCCATCCAGCGAATGCAGGCTGGCA‑gggg < 1:7111656/35‑1 (MQ=255) cgATTTCACATCCAGCGAATGCAGGCTGGCA‑gggg > 1:10179433/1‑35 (MQ=255) acttacccggtcggaagctgcattaCTGGCA‑gggg < 1:6996888‑M1/10‑1 (MQ=255) gATTTCACATCCAGCGAATGCAGGCTGGCA‑ggggg > 1:785425/1‑34 (MQ=255) gATTTCACATCCAGCGAATGCAGGCTGGCA‑ggggg > 1:13886591/1‑34 (MQ=255) gATTTCACATCCAGCGAATGCAGGCTGGCA‑ggggg > 1:13662966/1‑34 (MQ=255) gATTTCACATCCAGCGAATGCAGGCTGGCA‑GGGGc < 1:10012344/35‑1 (MQ=255) cttacccggtcggaagctgcattaCTGGCa‑ggggg < 1:18350050‑M1/11‑2 (MQ=255) agtttCGCATCCAGCGAATGCAGGCTGGCA‑GGGGc < 1:15286191/33‑1 (MQ=38) aTTTCATATCCAGCGAATGCAGGCTGGGA‑gggggg > 1:20094580/1‑33 (MQ=25) aTTTCACATCCAGCGAATGCAGGCTGGCA‑gggggg > 1:173266/1‑33 (MQ=255) aTTTCACATCCAGCGAATGCAGGCTGGCA‑gggggg > 1:17905879/1‑33 (MQ=255) tttCCCATCCAGCGAATGCAGGCTGGCA‑GGGGCGt < 1:18422612/35‑1 (MQ=255) tttCACATCCAGCGAATGCAGGCTGGCA‑ggggggg > 1:9338927/1‑32 (MQ=255) tttCACATCCAGCGAATGCAGGCTGGCA‑GGGGCGt < 1:3358684/35‑1 (MQ=255) acccggtcggaagctgcattaCTGGCA‑GGGGGGtt < 1:17474359‑M1/14‑1 (MQ=255) tCACATCCAGCGAATGCAGGCTGGCA‑GGGGCGttt < 1:4321444/35‑1 (MQ=255) cccggtcggaagctgcattaCTGGCA‑GGGGGgtta < 1:1046908‑M1/15‑2 (MQ=255) cacaTCCAGCGAATGCAGGCTGGCA‑GGGGGGgttt > 1:13984655/1‑35 (MQ=38) cacaTCCAGCGAATGCAGGCTGGCA‑GGGGCGtttt < 1:14492896/35‑1 (MQ=255) cggtcggaagctgcattaCTGGCA‑GGGGTGTTTTc < 1:9623199‑M1/17‑1 (MQ=255) cggtcggaagctgcattaCTGGCA‑GGGGGGTTTTc < 1:8639598‑M1/17‑1 (MQ=255) acaTCCAGCGAATGCAGGCTGGCA‑GGGGGGtttta > 1:19722266/1‑34 (MQ=255) acaTCCAGCGAATGCAGGCTGGCA‑GGGGGGGTTTc > 1:6455313/1‑35 (MQ=38) caTCCAGCGGATGCAGGCTGGCA‑GGGGCGtttttc < 1:19785462/35‑3 (MQ=25) caTCCAGCGAATGCAGGCTGGCA‑GGGGGGgttttc > 1:18805055/1‑33 (MQ=25) caTCCAGCGAATGCAGGCTGGCA‑GGGGGGgttttc > 1:1471876/1‑33 (MQ=25) caTCCAGCGAATGCAGGCTGGCA‑GGGGCGTTTTcc < 1:3047532/35‑1 (MQ=255) cAGCGAATGCAGGCTGGCA‑GGGGCGTTTTCCATCg < 1:4401877/35‑1 (MQ=255) aGCGAATGCAGGCTGGCAGGGGGGGTTTTCCaacc > 1:19762863/1‑32 (MQ=19) gCGAATGCAGGCTGGCA‑GGGGGGGTTTCCATCggt > 1:12851428/1‑33 (MQ=37) cGAATGCAGGCTGGCA‑GGGGGGGTTTCCATCGCtt > 1:9734137/1‑35 (MQ=38) cGAATGCAGGCTGGCA‑GGGGCGTTTTCCATCGCtt < 1:6818099/35‑1 (MQ=255) aaTGCAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCa < 1:9023166/35‑1 (MQ=255) aaTGCAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCa < 1:7487290/35‑1 (MQ=255) aTGCAGGCTGGCA‑GGGGGGGTTTTCATCGCTTCAg > 1:8984327/1‑35 (MQ=25) tGCAGGCTGGNA‑GGGGCGTTTTCCATCGCTTCAgg < 1:6033467/35‑1 (MQ=255) tGCAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCAgg < 1:16673787/35‑1 (MQ=255) tGCAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCAgg < 1:11157546/35‑1 (MQ=255) tGCAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCAgg < 1:11191991/35‑1 (MQ=255) gCAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCAggc < 1:11223308/35‑1 (MQ=255) gCAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCAggc < 1:11777523/35‑1 (MQ=255) gCAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCAggc < 1:1068368/35‑1 (MQ=255) gCAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCAggc < 1:19184164/35‑1 (MQ=255) cAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCAggcg < 1:7948663/35‑1 (MQ=255) cAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCAggcg < 1:17491017/35‑1 (MQ=255) aGGCTGGCA‑GGGGCGTTTTCCATCGCTTCAggcgg < 1:6269334/35‑1 (MQ=255) ggCTGGCA‑GGGGCGTTTTCCATCGCTTCAggcggc < 1:10935733/35‑1 (MQ=255) ggCTGGCA‑GGGGCGTTTTCCATCGCTTCAggcggc < 1:8734486/35‑1 (MQ=255) gCTGGCA‑TGGGCGTTTTCCATCGCTTCAGGCGGca > 1:3340876/1‑35 (MQ=255) gCTGGCA‑GGGGCGTTTTCCATCGCTTCAGGCGGca < 1:20510717/35‑1 (MQ=255) CTGGCA‑GGGGCGTTTTGCATCGCTTCAGGCGGcac > 1:8126472‑M1/1‑35 (MQ=255) CTGGCA‑GGGGCGTTTTCCATCGCTTCAGGCGGcac > 1:8470213‑M1/1‑35 (MQ=255) CTGGCA‑GGGGCGTTTTCCATCGCTTCAGGCGGcac < 1:8087869‑M1/35‑1 (MQ=255) CTGGCA‑GGGGCGTTTTCCATCGCTTCAGGCGGcac > 1:3180452‑M1/1‑35 (MQ=255) CTGGCA‑GGGGCGTTTTCCATCGCTTCAGGCGGcac < 1:5474601‑M1/35‑1 (MQ=255) CTGGCA‑GGGGCCTTTTCCATCGCTTCAGGCGGcac < 1:1259644‑M1/35‑1 (MQ=255) | CATATCACGCGATTTCACATCCAGCGAATGCAGGCTGGCA‑GGGGCGTTTTCCATCGCTTCAGGCGGCAC > REL606/1430198‑1430266 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |