New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3476747 = | 59 (0.570) | 10 (0.120) | 3/38 | NT | 12.0% | coding (1924/2085 nt) | malQ | 4‑alpha‑glucanotransferase (amylomaltase) |
? | REL606 | 4031309 = | 100 (1.230) | coding (968/1374 nt) | hemN | coproporphyrinogen III oxidase |
ACAGTGCTCTGTTAGGACTACAGCCGGAAGACTGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3476785‑3476747 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggGGATGGGCGTTTCCGCCATCAGCATGATTGGCGA > REL606/4031309‑4031342 ACAGTGCTCTGTTAGGACTACAGCCGGAAGACTGG > 1:11154790/1‑35 ACAGTGCTCTGTTAGGACTACAGCCGGAAGACTGG > 1:6330282/1‑35 ACAGTGCTCTGTTAGGACTACAGCCGGAAGACTGG > 1:16537410/1‑35 ACAGTGCTCTGTTAGGACTACAGCCGGAAGACTGG > 1:6028075/1‑35 ACAGTGCTCTGTTAGGACTACAGCCGGAAGACTGG > 1:5975400/1‑35 CAGTGCTCTGTTAGGACTACAGCCGGAAGACTGGC > 1:7671493/1‑35 AGTGCTCTGTTAGGACTACAGCCGGCAGACTGGCT > 1:20475966/1‑35 AGTGCTCTGTTAGGACTACAGCCGGAAGACTGGCT > 1:8657366/1‑35 TGCTCTGTTAGGACTACAGCCGGAAGACTGGCTGG > 1:9641433/1‑35 TGCTCTGTTAGGACTACAGCCGGAAGACTGGCTGG > 1:9337670/1‑35 TGCTCTGTTAGGACTACAGCCGGAAGACTGGCTGG > 1:6219612/1‑35 TGCTCTGTTAGGACTACAGCCGGAAGACTGGCTGG > 1:19782764/1‑35 TGCTCTGTTAGGACTACAGCCGGAAGACTGGCTGG > 1:14210827/1‑35 GCTCTGTTAGGACTACAGCCGGAAGACTGGCTGGG > 1:18845470/1‑35 CTCTGTTAGGACTACAGCCGGAAGACTGGCTGGGt > 1:3882443/1‑34 CTCTGTTAGGACTACAGCCGGAAGACTGGCTGGGt > 1:7136299/1‑34 CTCTGTTAGGACTACAGCCGGAAGACTGGCTGGGG > 1:2989299/1‑35 TCTGTTAGGGCTACAGCCGGAAGACTGGCTGGGGA > 1:20467125/1‑35 TCTGTTAGGACTACAGCCGGAAGACTGGCTGGGGg > 1:3243865/1‑34 TCTGTTAGGACTACAGCCGGAAGACTGGCTGGGGg > 1:2647222/1‑34 TCTGTTAGGACTACAGCCGGAAGACTGGCTGGGGA > 1:16518220/1‑35 CTGTTAGGACTACAGCCGGAAGACTGGCTGGGTAT > 1:15341984/1‑35 TGTTAGGACTACAGCCGGAAGACTGGCTGGGTATt > 1:12543565/1‑34 GTTAGGACTACAGCCGGAAGACTGGCTGGGTATGG > 1:14472036/1‑35 TTAGGACTACAGCCGGAAGACTGGCTGGGTATGGG > 1:1880972/1‑35 TTAGGACTACAGCCGGAAGACTGGCTGGGGATGGc > 1:4102755/1‑34 TTAGGACTACAGCCGGAAGACTGGCTGGGGATGGG > 1:17322102/1‑35 TAGGACTACAGCCGGAAGACTGGCTGGGTATGGGC > 1:10097268/1‑35 TAGGACTACAGCCGGAAGACTGGCTGGGGATGGGC > 1:423611/1‑35 AGGACTACAGCCGGAAGACTGGCTGGGTATGGGCG > 1:8840312/1‑35 AGGACTACAGCCGGAAGACTGGCTGGGGATGGGCG > 1:9645660/1‑35 GGACTACAGCCGGAAGACTGGCTGGGGATGGGggg > 1:17677823/1‑32 GGACTACAGCCGGAAGACTGGCTGGGGATGGGagg > 1:18985076/1‑32 GCTGGGGGTGGGCGTTTCCGCCATCAGCATGATTG < 1:12365851/35‑1 GCTGGGGATGGGCGTTTCCGCCATCAGCATGATTG < 1:16760619/35‑1 GCTGGGGATGGGCGTTTCCGCCATCAGCATGATTG < 1:13540746/35‑1 GCTGGGGATGGGCGTTTCCGCCATCAGCATGATTG < 1:11434616/35‑1 GCTGGGGATGGGCGTTTCCGCCATCAGCATGATTG < 1:17939576/35‑1 GCTGGGGATGGGCGTTTCCGCCATCAGCATGATTG < 1:18170750/35‑1 GCTGGGGATGGGCGTTTCCGCCATCAGCATGATTG > 1:18003434/1‑35 GCTGGGGAGGGGCGTTTCCGCCATCAGCATGATTG < 1:6805592/35‑1 CTGGGGATGGGCGTTTCCGCCATCAGCATGATTGG > 1:11717381/1‑35 CTGGGGATGGGCGTTTCCGCCATCAGCATGATTGG < 1:12285082/35‑1 CTGGGGATGGGCGTTTCCGCCATCAGCATGATTGG < 1:10215438/35‑1 CTGGGGATGGGCGTTTCCGCCATCAGCATGATTGG > 1:4198800/1‑35 CTGGGGATGGGCGTTTCCGCCATCAGCATGATTGG > 1:15946762/1‑35 CTGGGGATGGGCGTTTCCGCCATCAGCATGATTGG > 1:19712449/1‑35 TGGGGATGGGCGTTTCCGCCATCAGCATGATTGGC > 1:7745108/1‑35 TGGGGATGGGCGTTTCCGCCATCAGCATGATTGGC < 1:20047270/35‑1 TGGGGATGGGCGTTTCCGCCATCAGCATGATTGGC < 1:20292924/35‑1 TGGGGATGGGCGTTTCCGCCATCAGCATGATTGGC > 1:12564281/1‑35 TGGGGATGGGCGTTTCCGCCATCAGCATGATTGGC > 1:5009586/1‑35 TGGGGATGGGCGTTTCCGCCATCAGCATGATTGGC < 1:17236676/35‑1 TGGGGATGGGCGTTTCCGCCATCAGCATGATTGGC > 1:17165972/1‑35 TGGGGATGGGCGTTTCCGCCATCAGCATGATTGGC > 1:16912456/1‑35 TGGGGATGGGCGCTTCCGCCATCAGCATGATTGGC > 1:18756640/1‑35 GGGGATGGGCGTTTCCGCCATCAGCATGATTGGCG > 1:13502089/1‑35 GGGGATGGGCGTTTCCGCCATCAGCATGATTGGCG > 1:13022765/1‑35 GGGGATGGGCGTTTCCGCCATCAGCATGATTGGCG > 1:16973424/1‑35 GGGGATGGGCGTTTCCGCCATCAGCATGATTGGCG > 1:18092888/1‑35 GGGGATGGGCGTTTCCGCCATCAGCATGATTGGCG > 1:9866093/1‑35 GGGATGGGCGTTTCCGCCATCAGCATGATTGGCta > 1:17844091/1‑33 GGGATGGGCGTTTCCGCCATCAGCATGATTGGCGA > 1:5200193/1‑35 GGGATGGGCGTTTCCGCCATCAGCATGATTGGCGA < 1:19879455/35‑1 GGGATGGGCGTTTCCGCCATCAGCATGATTGGCGA < 1:19661742/35‑1 GGGATGGGCGTTTCCGCCATCAGCATGATTGGCGA < 1:18460062/35‑1 ACAGTGCTCTGTTAGGACTACAGCCGGAAGACTGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3476785‑3476747 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggGGATGGGCGTTTCCGCCATCAGCATGATTGGCGA > REL606/4031309‑4031342 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |