Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,517,306 | IS186 (+) +8 bp :: Δ2 | 56.2% | coding (187‑194/1743 nt) | ggt ← | gamma‑glutamyltranspeptidase periplasmic precursor |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 590715 = | NA (NA) | 34 (0.380) | 22/42 | NT | 41.2% | noncoding (1/1343 nt) | IS186 | repeat region |
? | REL606 | = 3517313 | 30 (0.540) | coding (187/1743 nt) | ggt | gamma‑glutamyltranspeptidase periplasmic precursor | |||||
* | ? | REL606 | = 2774194 | NA (NA) | 52 (0.530) | 28/46 | NT | 47.8% | noncoding (1341/1343 nt) | IS186 | repeat region |
? | REL606 | 3517306 = | 37 (0.580) | coding (194/1743 nt) | ggt | gamma‑glutamyltranspeptidase periplasmic precursor |
Only 100 of 158 total aligned reads displayed.
GAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTA > REL606/590681‑590747 | aaCCGAAGAAGTAGCCGTTGTGCGGGGAGTAATcc < 1:8934658/35‑1 (MQ=255) aaCCGAAGAAGTAGCCGTTGTGCGGGGAGTAATcc < 1:7604507/35‑1 (MQ=255) cccGAAGATTTAGCCGTTGTGCGGGGAGTAATccc < 1:17607158/34‑1 (MQ=37) cccGAAGAAGTAGCCGTTGTGCGGGGAGTAATccc < 1:14318719/34‑1 (MQ=255) cccGAAGAAGTAGCCGTTGTGCGGGGAGTAATccc < 1:13290446/34‑1 (MQ=255) aCCGAAGAAGTAGCCGTTGTGCGGGGAGTAATccc < 1:6344352/35‑1 (MQ=255) ccGAAGAGGTAGCCGTTGTGCGGGGAGTAATCCCa < 1:4600514/35‑1 (MQ=255) ccGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCa < 1:19705740/35‑1 (MQ=255) ccGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCa < 1:14660104/35‑1 (MQ=255) ggaaggaGTAGCCGTTGTGCGGGGAGTAATCCCAt < 1:2362806/34‑1 (MQ=255) cGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCAt < 1:7881644/35‑1 (MQ=255) gaagaaTTAGCCGTTGTGCGGGGAGTAATCCCATa < 1:9389180/35‑1 (MQ=255) agaatTAGCCGTTGTGCGGGGAGTAATCCCATAAg < 1:19467395/35‑1 (MQ=255) gaatTAGCCGTTGTGCGGGGAGTAATCCCATAAgc < 1:10597446/35‑1 (MQ=255) gaagTAGCCGTTGTGCGGGGAGTAATCCCATAAgc < 1:10916700/35‑1 (MQ=255) gaagTAGCCGTTGTGCGGGGAGTAATCCCATAAgc < 1:10821778/35‑1 (MQ=255) gaagTAGCCGTTGTGCGGGGAGTAATCCCATAAgc < 1:13937378/35‑1 (MQ=255) gaagTAGCCGTTGTGCGGGGAGTAATCCCATAAgc < 1:19237940/35‑1 (MQ=255) gaagTAGCCGTTGTGCGGGGAGTAATCACATAAgc < 1:8178220/35‑1 (MQ=255) aagTAGCCGTTGTGCGGGGAGTAATCCCATAAgcg < 1:14230449/35‑1 (MQ=255) aagTAGCCGTTGTGCGGGGAGTAATCCCATAAgcg < 1:14150887/35‑1 (MQ=255) aagTAGCCGTTGTGCGGGGAGTAATCCCATAAgcg < 1:18854315/35‑1 (MQ=255) agTAGCCGTTGTGCGGGGAGTAATCCCATAAgcgc < 1:9306163/35‑1 (MQ=255) gTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCt < 1:6642394/35‑1 (MQ=255) gTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCt < 1:227920/35‑1 (MQ=255) gTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCt < 1:16197129/35‑1 (MQ=255) tAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTa < 1:7428290/35‑1 (MQ=255) tAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTa < 1:11307943/35‑1 (MQ=255) aGCCGTTGTGCGGGGAGTAATCCCATAAGGGCTaa < 1:15616573/35‑1 (MQ=255) aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa < 1:16443514/35‑1 (MQ=255) aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa > 1:18166638/1‑35 (MQ=255) aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa < 1:14549812/35‑1 (MQ=255) aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa < 1:11800041/35‑1 (MQ=255) aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa < 1:7735876/35‑1 (MQ=255) gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAAc > 1:20088663/1‑35 (MQ=255) gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAAc < 1:2354734/35‑1 (MQ=255) gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAAc < 1:43495/35‑1 (MQ=255) gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAAc < 1:5875237/35‑1 (MQ=255) gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAAc < 1:10133799/35‑1 (MQ=255) ccGTTGTGCGGGGAGTAATCCCATAAGCGCTAACt < 1:11043717/35‑1 (MQ=255) ccGTTGTGCGGGGAGTAATCCCATAAGCGCTAACt > 1:16044511/1‑35 (MQ=255) ccGTTGTGCGGGGAGTAATCCCATAAGCGCTAACt < 1:7515107/35‑1 (MQ=255) cGTTGTGCGGGGAGTAATCCCATAAGAGCTAACtt < 1:10677184/35‑1 (MQ=255) cGTCGTGCGGGGAGTAATCCCATAAGCGCTAACtt < 1:11779728/35‑1 (MQ=255) gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa > 1:3997342/1‑35 (MQ=255) gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa > 1:4463488/1‑35 (MQ=255) gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa < 1:13803757/35‑1 (MQ=255) gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa > 1:1213921/1‑35 (MQ=255) gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa > 1:19395925/1‑35 (MQ=255) gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa < 1:8878929/35‑1 (MQ=255) gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa > 1:10403563/1‑35 (MQ=255) gTTGTGCGGGGAGTAATACCATAAGCGCTAACTTa < 1:5482744/35‑1 (MQ=255) agggtgGGGGGAGATCTCCCATAAGCGCTAACTTa > 1:13218243/4‑35 (MQ=0) ttGTGCGGGGAGTAATCCCATAAGCGCTAACTTaa < 1:15899830/35‑1 (MQ=255) tgtgCGGGGAGTAATCCCATAAGCGCTAACTTAAg < 1:1193609/35‑1 (MQ=255) tgtgCGGGGAGTAATCCCATAAGCGCTAACTTAAg < 1:11559997/35‑1 (MQ=255) tgtgCGGGGAGTAATCCCATAAGCGCTAACTTAAg < 1:4911245/35‑1 (MQ=255) tgtgCGGGGAGTAATCCCATAAGCGCTAACTTAAg < 1:2211165/35‑1 (MQ=255) tgtgCGGGGAGTAATCCCATAAGCGCTAACTTAAg > 1:15493921/1‑35 (MQ=255) tgtgCGGGGAGTAATCCCATAAGCGCTAACTAAAg > 1:13846380/1‑35 (MQ=255) gtgCGGGGAGTAATCCCATAAGCGCTAACTTAAgg < 1:6249225/35‑1 (MQ=255) gtgCGGGGAGTAATCCCATAAGCGCTAACTTAAgg < 1:9793717/35‑1 (MQ=255) gtgCGGGGAGTAATCCCATAAGCGCTAACTTAAgg < 1:2398146/35‑1 (MQ=255) gtgCGGGGAGTAATCCCATAAGCGCTAACTTAAgg < 1:19847188/35‑1 (MQ=255) gtgCGGGGAGTAATCCCATAAGCGCTAACTTAAgg > 1:20442289/1‑35 (MQ=255) tgCGGGGAGTAATCCCATAAGCGCTAACTTAAggg < 1:905087/35‑1 (MQ=40) tgCGGGGAGTAATCCCATAAGCGCTAACTTAAggg > 1:20614089/1‑35 (MQ=40) cGGGGAGTAATCCCATAAGCGCTAACTTAAGGGtt > 1:17506025/1‑35 (MQ=38) ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg > 1:18956244/1‑35 (MQ=38) ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg > 1:885732/1‑35 (MQ=38) ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg < 1:5541995/35‑1 (MQ=38) ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg > 1:1837989/1‑35 (MQ=38) ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg > 1:9363492/1‑35 (MQ=38) ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg > 1:4249438/1‑35 (MQ=38) ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg < 1:1795180/35‑1 (MQ=38) gggAGTAATCCCATAAGCGCTAACTTAAGGGTtgt < 1:15850741/35‑1 (MQ=40) gggAGTAATCCCATAAGCGCTAACTTAAGGGTtgt < 1:18142027/35‑1 (MQ=40) ggAGTAATCCCATAAGCGCTAACTTAAGGGTtgtg < 1:7017107/35‑1 (MQ=255) ggAGTAATCCCATAAGCGCTAACTTAAGGGTtgtg < 1:17061073/35‑1 (MQ=255) ggAGTAATCCCATAAGCGCTAACTTAAGGGTtgtg > 1:541434/1‑35 (MQ=255) gAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg < 1:18831386/35‑1 (MQ=255) gAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg > 1:7099851/1‑35 (MQ=255) gAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg > 1:5141706/1‑35 (MQ=255) gAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg > 1:20595400/1‑35 (MQ=255) gAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg < 1:12946392/35‑1 (MQ=255) aGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGt < 1:5734424/35‑1 (MQ=255) aGTAATCCCATAAGCGCTAACTTAAGGATTGTGGt < 1:2634175/35‑1 (MQ=255) gTAATCCCATAAGTGCTAACTTAAGGGTTGTGGTa < 1:14081425/35‑1 (MQ=255) gTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTa < 1:8421614/35‑1 (MQ=40) gTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTa > 1:3551125/1‑35 (MQ=40) tAATCCCATAAGCGCTAACTTAAGGGTTGTGGTAt > 1:6840818/1‑35 (MQ=38) tAATCCCATAAGCGCTAACTTAAGGGTTGTGGTAt < 1:19413806/35‑1 (MQ=38) tAATCCCATAAGCGCTAACTTAAGGGTTGTGATAt < 1:16789447/35‑1 (MQ=255) aaTCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt > 1:7673420/1‑35 (MQ=35) aaTCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt < 1:924807/35‑1 (MQ=35) aaTCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt < 1:9465120/35‑1 (MQ=35) aaTCCCATAAGCGCTAACTTAAGGGTTGTGGCAtt < 1:14969160/35‑1 (MQ=255) aaTCCCATAAGCGCTAACTTAAGGGTGGTGGTAtt < 1:18368822/35‑1 (MQ=255) aTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa < 1:19795024/35‑1 (MQ=32) aTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa > 1:19344593/1‑35 (MQ=32) | GAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTA > REL606/590681‑590747 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |