New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 220422468 (0.660)16 (0.200) 4/38 NT 14.9% coding (1109/1251 nt) yeiJ predicted nucleoside transporter
?REL606 2724133 = 129 (1.590)coding (227/774 nt) srlR DNA‑bindng transcriptional repressor

Only 100 of 274 total aligned reads displayed.

CCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAGT  >  REL606/2724099‑2724167
                                  |                                  
ccgCCTATCGATCATAAAACACTCATCAACACCca                                    <  1:10812027/35‑1 (MQ=255)
ccgCCTATCGATCATAAAACACTCATCAACACCca                                    >  1:18832013/1‑35 (MQ=255)
ccgCCTATCGATCATAAAACACTCATCAACACCca                                    <  1:11504695/35‑1 (MQ=255)
ccgCCTATCGATCATAAAACACTCATCAACACCca                                    >  1:11713712/1‑35 (MQ=255)
  gCCTATCGATCATAAAACACTCATCAACACCcatg                                  >  1:2866249/1‑33 (MQ=255)
  gCCTATCGATCATAAAACACTCATCAACACCcaca                                  >  1:7024926/1‑35 (MQ=255)
   ccTATCGATCATAAAACACTCATCAACACCCACaa                                 >  1:3863330/1‑35 (MQ=255)
    cTATCGATCATAAAACACTCATCAACACCCACaag                                >  1:1364808/1‑35 (MQ=255)
    cTATCGATCATAAAACACTCATCAACACCCACaag                                >  1:19338903/1‑35 (MQ=255)
    cTATCGATCATAAAACACTCATCAACACCCACaag                                >  1:13043425/1‑35 (MQ=255)
    cTATCGATCATAAAACACTCATCAACACCCACaag                                >  1:1258507/1‑35 (MQ=255)
    cTATCGATCATAAAACACTCATCAACACCCACaag                                >  1:657511/1‑35 (MQ=255)
     tATCGATCATAAAACACTCATCAACACCCACaaga                               >  1:372429/1‑35 (MQ=255)
     tATCGATCATAAAACACTCATCAACACCCACaaga                               >  1:9379657/1‑35 (MQ=255)
      aTCGATCATAAAACACTCATCAACACCCACaagaa                              >  1:19816363/1‑35 (MQ=255)
      aTCGATCATAAAACACTCATCAACACCCACaagaa                              >  1:2580850/1‑35 (MQ=255)
      aTCGATCATAAAACACTCATCAACACCCACaagaa                              >  1:5052993/1‑35 (MQ=255)
       tCGATCATAAAACACTCATCAACACCCACaagaaa                             >  1:12354472/1‑35 (MQ=255)
       tCGATCATAAAACACTCATCAACACCCACaagaaa                             >  1:15533124/1‑35 (MQ=255)
       tCGATCATAAAACACTCATCAACACCCACaagaaa                             >  1:14861680/1‑35 (MQ=255)
       tCGATCATAAAACACTCATCAACACCCACaagaaa                             >  1:13232283/1‑35 (MQ=255)
        cGATCATAAAACACTCATCAACACCCACaagaaag                            >  1:20036015/1‑35 (MQ=255)
        cGATCATAAAACACTCATCAACACCCACaagaaag                            >  1:9510090/1‑35 (MQ=255)
         gATCATAAAACACTCATCAACACCCACaagaaaga                           >  1:10478721/1‑35 (MQ=255)
          aTCATAAAACACTCATCAACACCCACAAGAAagag                          >  1:13347604/1‑35 (MQ=255)
          aTCATAAAACACTCATCAACACCCACAAGAAagag                          >  1:14231649/1‑35 (MQ=255)
          aTCATAAAACACTCATCAACACCCACAAGAAagag                          >  1:11292906/1‑35 (MQ=255)
          aTCATAAAACACTCATCAACACCCACAAGAAagag                          >  1:4436331/1‑35 (MQ=255)
           tCATAAAACACTCATCAACACCCACAAGAAAGAGc                         >  1:8620110/1‑35 (MQ=255)
            naTAAAACACTCATCAACACCCACAAGAAAGAGCt                        >  1:12087238/2‑35 (MQ=255)
            cATAAAACACTCATCAACACCCACAAGAAAGAGCt                        >  1:20077946/1‑35 (MQ=255)
             aTAAAACACTCATCAACACCCACAAGAAAGAGCTg                       >  1:18906917/1‑35 (MQ=255)
             aTAAAACACTCATCAACACCCACAAGAAAGAGCTg                       >  1:19754443/1‑35 (MQ=255)
             aTAAAACACTCATCAACACCCACAAGAAAGAGCTg                       >  1:7571999/1‑35 (MQ=255)
             aTAAAACACTCATCAACACCCACAAGAAAGAGCTg                       >  1:17213343/1‑35 (MQ=255)
             aTAAAACACTCATCAACACCCACAAGAAAGAGCTg                       >  1:17547734/1‑35 (MQ=255)
             aTAAAACACTCATCAACACCAACAAGAAAGAGCTg                       <  1:14557365/35‑1 (MQ=255)
              tAAAACACTCATCAACACCCACAAGAAAGAGCTGa                      >  1:16725119/1‑35 (MQ=255)
               aaaaCACTCATCAACACCCACAAGAAAGAGCTGAt                     >  1:4242333/1‑35 (MQ=255)
               aaaaCACTCATCAACACCCACAAGAAAGAGCTGAt                     >  1:8199640/1‑35 (MQ=255)
               aaaaCACTCATCAACACCCACAAGAAAGAGCTGAt                     >  1:19428421/1‑35 (MQ=255)
                aaaCACTCATCACCACCCACAAGAAAGAGCTGAtt                    <  1:3525064/35‑1 (MQ=255)
                aaaCACTCATCAACACCCACAAGAAAGAGCTGAtt                    >  1:12892712/1‑35 (MQ=255)
                aaaCACTCATCAACACCCACAAGAAAGAGCTGAtt                    >  1:1541154/1‑35 (MQ=255)
                 accacTCATCACCACCCACAAGAAAGAGCTGATTg                   <  1:7628619/33‑1 (MQ=38)
                 aaCCCTCATCACCACCCACAAGAAAGAGCTGATTg                   <  1:7108646/35‑1 (MQ=37)
                 aaCACTCATCACCACCCACAAGAAAGAGCTGATTg                   <  1:14389668/35‑1 (MQ=255)
                 aaCACTCATCACCACCCACAAGAAAGAGCTGATTg                   <  1:18000521/35‑1 (MQ=255)
                 aaCACTCATCAACACCCACAAGAAAGAGCTGATTg                   >  1:13440561/1‑35 (MQ=255)
                 aaCACTCATCAACACCCACAAGAAAGAGCTGATTg                   >  1:6196928/1‑35 (MQ=255)
                 aaCACTCATCAACACCCACAAGAAAGAGCTGATTg                   >  1:16208683/1‑35 (MQ=255)
                  acacTCATCAACACCCACAAGAAAGAGCTGATTGc                  >  1:15149338/1‑35 (MQ=255)
                  acacTCATCAACACCCACAAGAAAGAGCTGATTGc                  >  1:13893190/1‑35 (MQ=255)
                  acacTCATCAACACCCACAAGAAAGAGCTGATTGc                  >  1:12989136/1‑35 (MQ=255)
                   cacTCATCAACACCCACAAGAAAGAGCTGATTGCa                 >  1:6666292/1‑35 (MQ=255)
                   cacTCATCAACACCCACAAGAAAGAGCTGATTGCa                 >  1:15694467/1‑35 (MQ=255)
                   cacTCATCAACACCCACAAGAAAGAGCTGATTGCa                 >  1:19678019/1‑35 (MQ=255)
                   cacTCATCAACACCCACAAGAAAGAGCTGATTGCa                 >  1:4091879/1‑35 (MQ=255)
                   cacTCATCAACACCCACAAGAAAGAGCTGATTGCa                 >  1:9729200/1‑35 (MQ=255)
                    ccTCATCACCACCCACAAGAAAGAGCTGATTGCAg                <  1:6275429/34‑1 (MQ=255)
                    ccTCATCACCACCCACAAGAAAGAGCTGATTGCAg                <  1:10055709/34‑1 (MQ=255)
                    acTCATCAACACCCACAAGAAAGAGCTGATTGCAg                >  1:1615784/1‑35 (MQ=255)
                     cccaccaccacccACAAGAAAGAGCTGATTGCAGa               <  1:3695243‑M2/22‑1 (MQ=255)
                     cTCATCAACACCCACAAGAAAGAGCTGATTGCAGa               >  1:8829127/1‑35 (MQ=255)
                      tcatcaACACCCACAAGAAAGAGCTGATTGCAGaa              >  1:11188723/1‑35 (MQ=255)
                      tcatcaACACCCACAAGAAAGAGCTGATTGCAGaa              >  1:3628435/1‑35 (MQ=255)
                      tcatcaACACCCACAAGAAAGAGCTGATTGCAGaa              >  1:15288846/1‑35 (MQ=255)
                      tcaccaccacccACAAGAAAGGGCTGATTGCAGaa              <  1:18460529‑M2/23‑1 (MQ=255)
                       catcaccacccACAAGAAAGAGCTGATTGCAGAAg             <  1:8542538‑M2/24‑1 (MQ=255)
                       catcaACACCCACAAGAAAGAGCTGATTGCAGAAg             >  1:9839440/1‑35 (MQ=255)
                        atcaACACCCACAAGAAAGAGCTGATTGCAGAAGc            >  1:11730460/1‑35 (MQ=255)
                        accaccacccACAAGAAAGAGCTGATTGCAGAAGc            <  1:5664325‑M2/25‑1 (MQ=255)
                        accaccacccACAAGAAAGAGCTGATTGCAGAAGc            <  1:16371269‑M2/25‑1 (MQ=255)
                         tcaccacccACAAGAAAGAGCTGATTGCAGAAGCt           <  1:10118614‑M2/26‑1 (MQ=255)
                         tcaACACCCACAAGAAAGAGCTGATTGCAGAAGCt           >  1:19533621/1‑35 (MQ=255)
                         tcaACACCCACAAGAAAGAGCTGATTGCAGAAGCt           >  1:15552815/1‑35 (MQ=255)
                         ccaccgcccACAAGAAAGAGCTGATTGCAGAAGCt           <  1:16485849‑M2/26‑1 (MQ=255)
                          caccacccACAAGAAAGAGCTGATTGCAGAAGCTg          <  1:12295169‑M2/27‑1 (MQ=255)
                          caccacccACAAGAAAGAGCTGATTGCAGAAGCTg          <  1:7390228‑M2/27‑1 (MQ=255)
                          caccacccACAAGAAAGAGCTGATTGAAGAAGCTg          <  1:17951218‑M2/27‑1 (MQ=255)
                          caACACCCACAAGAAAGAGCTGATTGCAGAAGCTg          >  1:17690919/1‑35 (MQ=255)
                          caACACCCACAAGAAAGAGCTGATTGCAGAAGCTg          >  1:7743436/1‑35 (MQ=255)
                           accacccACAAGAAAGAGCTGATTGCAGAAGCTGc         <  1:17400263‑M2/28‑1 (MQ=255)
                           aaCACCCACAAGAAAGAGCTGATTGCAGAAGCTGc         >  1:10641320/1‑35 (MQ=255)
                           aaCACCCACAAGAAAGAGCTGATTGCAGAAGCTGc         >  1:3214797/1‑35 (MQ=255)
                           aaCACCCACAAGAAAGAGCTGATTGCAGAAGCTGc         >  1:1268672/1‑35 (MQ=255)
                           aaCACCCACAAGAAAGAGCTGATTGCAGAAGCTGc         >  1:1476584/1‑35 (MQ=255)
                            ccgcccACAAGAAGGAGCTGATTGCAGAAGCTGcc        <  1:17145634/32‑1 (MQ=37)
                            ccccccACAAGAAAGAGCTGATTGCAGAAGCTGcc        <  1:6362212‑M2/29‑1 (MQ=255)
                            ccacccACAAGAAAGAGCTGATTGCAGAAGCTGcc        <  1:15895606‑M2/29‑1 (MQ=255)
                            acacCCACAAGAAAGAGCTGATTGCAGAAGCTGcc        >  1:15959200/1‑35 (MQ=255)
                            acacCCACAAGAAAGAGCTGATTGCAGAAGCTGcc        >  1:20576068/1‑35 (MQ=255)
                             cacccACAAGAAAGAGCTGATTGCAGAAGCTGCCg       >  1:4678642‑M2/6‑35 (MQ=255)
                              acccACAAGAAAGAGCTGATTGCAGAAGCTGCCGt      >  1:7148299‑M2/5‑35 (MQ=255)
                              acccACAAGAAAGAGCTGATTGCAGAAGCTGCCGt      >  1:18415485‑M2/5‑35 (MQ=255)
                              acccACAAGAAAGAGCTGATTGCAGAAGCTGCCGt      >  1:4965903‑M2/5‑35 (MQ=255)
                                ccACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTa    >  1:9917473‑M2/3‑35 (MQ=255)
                                ccACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTa    >  1:19168125‑M2/3‑35 (MQ=255)
                                ccACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTa    >  1:2264338‑M2/3‑35 (MQ=255)
                                  acaAGAAAGAGCTGATTGCAGAAGCTGCCGTTAGt  >  1:19858907/1‑35 (MQ=255)
                                  |                                  
CCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAGT  >  REL606/2724099‑2724167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.