Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 573,202 | 0 | T→G | 100.0% | 0.2 | 2 | H96P (CAC→CCC) | ECB_00530 | conserved hypothetical protein |
Rejected: E-value exceeds prediction threshold. | ||||||||||
Reads supporting (aligned to +/- strand): new base (2/0): ref base (0/0): total (2/0) |
CGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTG > REL606/573175‑573216 | cgcAGACCGGCACGCCACAGCGGCGGGGGCGccct > 1:4389990/1‑33 (MQ=1) ncAGACCGGCACGCCACAGCGGCGGGGGGGCCTTc > 1:8021393/2‑35 (MQ=1) gcAGACCGGCACGCCACAGCGGCGGGGGGGCCTTc > 1:19464316/1‑35 (MQ=1) gcAGACCGGCACGCCACAGCGGCGGGGGCGccctt > 1:15872081/1‑32 (MQ=1) cGGCACGCCACAGCGGCGGGGGGGCCCTCCTGCTg > 1:5855487/1‑35 (MQ=0) | CGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTG > REL606/573175‑573216 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |