New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1337070 = | 141 (1.370) | 6 (0.070) | 5/42 | NT | 7.6% | coding (463/591 nt) | ribA | GTP cyclohydrolase II protein |
? | REL606 | 4326307 = | 22 (0.240) | coding (1153/1341 nt) | dcuB | C4‑dicarboxylate antiporter |
ATAAGTCGGCAGGATGTAATAACCGTAGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACG > REL606/4326275‑4326341 | aTAAGTCGGCAGGATGTAATAACCGTAGCAAGCCg > 1:10465264/1‑35 (MQ=255) aTAAGTCGGCAGGATGTAATAACCGTAGCAAGCCg > 1:441865/1‑35 (MQ=255) aTAAGTCGGCAGGATGTAATAACCGCAGCAAGccc > 1:9524475/1‑34 (MQ=255) tAAGTCGGCAGGATCTAATAACCGTAGCAAGCCgg > 1:15656469/1‑35 (MQ=255) aaGTCGGCAGGATGTAATAACCGTAGAAACCCggg > 1:16068280/1‑34 (MQ=37) aGTCGGCAGGATGTAATAACCGTAGCAAGCCgggg > 1:5137872/1‑33 (MQ=255) aGTCGGCAGGATGTAATAACCGTAGCAAACCgggg > 1:19552590/1‑33 (MQ=38) ggCAGGATGTAATAACCGTAGCAAGCCGGTGCTGa > 1:12783000/1‑35 (MQ=255) cAGGATGTAATAACCGTAGCAAGCCGGTGCTGAAg > 1:7965103/1‑35 (MQ=255) cAGGATGTAATAACCGTAGCAAGCCGGGGCTGAAg > 1:13997743/1‑35 (MQ=255) aGGATGTAATAACCGTAGCAACCCGGGGTGGAAGc > 1:13254650/1‑35 (MQ=19) gATGTAATAACCGTAGCAAGCCGGTGCTGAAGCCa > 1:7312711/1‑35 (MQ=255) gATGTAATAACCGTAGCAAGCCGGGGCTGAAGCCa > 1:14574344/1‑35 (MQ=255) gATGTAATAACCGTAGCAAGCCGGCGCTAAAGcac > 1:19905786/1‑33 (MQ=25) tGTAATAACCGTAGCAAGCCGGTGCTGAAGCCAct > 1:16771440/1‑34 (MQ=255) tGTAATAACCGTAGCAAGCCGGTGCTGAAGCCACg > 1:6383059/1‑35 (MQ=255) tGTAATAACCGTAGCAAGCCGGTGCTGAAGCCACg > 1:11816049/1‑35 (MQ=255) tGTAATAACCGTAGCAAGCCGGTGCTGAAGCCACg > 1:18460306/1‑35 (MQ=255) aataacccgaaaaaagCCGGTGCTGAAGCCACGAt < 1:6660830‑M2/19‑1 (MQ=255) aataaCCGTAGCAAGCCGGTGCTGAAGCCACGATg > 1:8898063/1‑35 (MQ=255) aataaCCGTAGCAAGCCGGTGCTGAAGCCACGATg > 1:5241813/1‑35 (MQ=255) taacccgaaaaaagCCGGTGCTGAAGCCACGATGt < 1:8250746‑M2/21‑1 (MQ=255) ataaCCGTAGCAAGCCGGTGCTGAAGCCCCGATGt > 1:9459940/1‑35 (MQ=255) ataaCCGTAGCAAGCCGGTGCTGAAGCCACGATGt > 1:7689360/1‑35 (MQ=255) ataaCCGTAGCAAGCCGGTGCTGAAGCCACGATGt > 1:14739554/1‑35 (MQ=255) aacccgaaaaaagCCGGTGCTGAAGCCACGATGTa < 1:6725320‑M2/22‑1 (MQ=255) aacccaaaaaaagCCGGTGCTGAAGCCACGATGTa < 1:5301302‑M2/22‑1 (MQ=255) aacccGTACAAAGCCGGTGCTGAAGCCACGATGTa < 1:2701059/32‑1 (MQ=25) acccggaaaaagCCGGTGCTGAAGCCACGATGTAt < 1:243713‑M2/23‑1 (MQ=255) aaCCGTAGCAAGCCGGTGCTGAAGCCACGACGtct > 1:2294685/1‑33 (MQ=38) cccaaaaaaagCCGGTGCTGAAGCCACGATGTATg < 1:5013937‑M2/24‑1 (MQ=255) aCCGTAGCAAGCCGGTGCTGAAGCCACGATGTATg > 1:18530467/1‑35 (MQ=255) aCCGTAGCAAGCCGGTGCTGAAGCCACGATGTATg > 1:12092574/1‑35 (MQ=255) ccGTAGCAAGCCGGTGCTGAAGCCACGATGTATGc > 1:18604211/1‑35 (MQ=255) ggaaaaaagCCGGTGCTGAAGCCACGATGTATGcc < 1:17599155‑M2/26‑1 (MQ=255) cggaaaaagCCGGTGCTGAAGCCACGATGTATGcc < 1:201886‑M2/26‑1 (MQ=255) cGTAGCAAGCCGGTGCTGAAGCCACGATGTATGcc > 1:6882871/1‑35 (MQ=255) gaacaaagCCGGTGCTGAAGCCACGATGTATGCCg < 1:10959388‑M2/27‑1 (MQ=255) gTAGCAAGCCGGTGCTGAAGCCACGATGTATCCCg > 1:1175477/1‑35 (MQ=255) tAGCAAGCCGGTGCTGAAGCCACGATGTATGCCgg > 1:15373005/1‑35 (MQ=255) tAGCAAGCCGGTGCTGAAGCCACGATGTATGCCgg > 1:14553475/1‑35 (MQ=255) tAGCAAGCCGGTGCTGAAGCCACGATGTATGCCgg > 1:11131223/1‑35 (MQ=255) tAGCAAGCCGGTGCTGAAGCCACGATGTATGCCgg > 1:8332926/1‑35 (MQ=255) aGCAAGCCGGTTCTGAAGCCACGATGTATGCCGGa > 1:382017/1‑35 (MQ=255) aGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGa > 1:1083649/1‑35 (MQ=255) aGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGa > 1:18995545/1‑35 (MQ=255) aGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGa > 1:12322704/1‑35 (MQ=255) gCAAGCCGGTGCTGAAGCCACGATGTATGCCGGAt > 1:8430046/1‑35 (MQ=255) gCAAGCCGGTGCTGAAGCCACGATGTATGCCGGAt > 1:4937961/1‑35 (MQ=255) aaaagCCGGTGCTGAAGCCACGATGTATGCCGGAt < 1:10875584‑M2/30‑1 (MQ=255) cAAGCCGGTGCTGAAGCCACGATGTATGCCGGATc > 1:5099133/1‑35 (MQ=255) cAAGCCGGTGCTGAAGCCACGATGTATGCCGGATc > 1:18075302/1‑35 (MQ=255) cAAGCCGGTGCTGAAGCCACGATGTATGCCGGATc > 1:886219/1‑35 (MQ=255) aaagCCGGTGCTGAAGCCACGATGTATGCCGGATc < 1:19267876‑M2/31‑1 (MQ=255) aaagCCGGTGCTAAAGCCACGATGTATGCCGGATc < 1:15816083‑M2/31‑1 (MQ=255) aaagCCGGGGCTGAAGCCACGATGTATGCCGGATc < 1:2847948‑M2/31‑1 (MQ=255) aagCCGGTGCTGAAGCCACGATGTATGCCGGATCa > 1:6927484‑M2/4‑35 (MQ=255) aagCCGGTGCTGAAGCCACGATGTATGCCGGATCa < 1:9770302‑M2/32‑1 (MQ=255) aagCCGGTGCTGAAGCCACGATGTATGCCGGATCa < 1:11851125‑M2/32‑1 (MQ=255) aagCCGGTGCTGAAGCCACGATGTATGCCGGATCa < 1:18429888‑M2/32‑1 (MQ=255) agCCGGTGCTGAAGCCACGATGTATGCCGGATCaa < 1:7066477‑M2/33‑1 (MQ=255) agCCGGTGCTGAAGCCACGATGTATGCCGGATCaa > 1:17001189‑M2/3‑35 (MQ=255) gCCGGTGCTGAAGCCACGATGTATGCCGGATCAAc > 1:9273656‑M2/2‑35 (MQ=255) gCCGGTGCTGAAGCCACGATGTATGCCGGATCAAc < 1:979453‑M2/34‑1 (MQ=255) gCCGGTGCTGAAGCCACGATGTATGCCGGATCAAc > 1:997233‑M2/2‑35 (MQ=255) gCCGGTGCTGAAGCCACGATGTATGCCGGATCAAc < 1:13039844‑M2/34‑1 (MQ=255) gCCGGTGCTAAAGCCACGATGTATGCCGGATCAAc < 1:12811425‑M2/34‑1 (MQ=255) cccGGTGCTAAAGCCACGATGTATGCCGGATCAAc < 1:5109557/34‑1 (MQ=255) ccGGTGCTGAAGCCACGATGTATGCCGGATCAACg < 1:7306963/35‑1 (MQ=255) ccGGTGCTGAAGCCACGATGTATGCCGGATCAACg < 1:16970726/35‑1 (MQ=255) ccGGTGCTGAAGCCACGATGTATGCCGGATCAACg > 1:15659673/1‑35 (MQ=255) | ATAAGTCGGCAGGATGTAATAACCGTAGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACG > REL606/4326275‑4326341 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |