New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2175017 | 45 (0.440) | 18 (0.200) | 5/42 | NT | 24.6% | coding (1595/1716 nt) | dld | D‑lactate dehydrogenase, FAD‑binding, NADH independent |
? | REL606 | = 4351424 | 71 (0.790) | intergenic (+32/‑106) | groEL/yjeI | chaperonin GroEL/hypothetical protein |
AGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2174981‑2175017 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATT < REL606/4351424‑4351391 AGCGGGGCGCGCAGTACCCTGCCGAGCATAACGTC < 1:5599115/35‑1 AGCGCGGCGCGCAGTACCCTGCCGAGCATATCGTC > 1:18679184/1‑35 AGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTC > 1:9272536/1‑35 AGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTC < 1:14597045/35‑1 AGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTC > 1:5233997/1‑35 AGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTC < 1:16917706/35‑1 AGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTC < 1:7541959/35‑1 AGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTC > 1:16165526/1‑35 AGCGCGGCGCGAAGTACCCTGCCGAGCATAACGTC < 1:6438621/35‑1 GCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCG < 1:14679199/35‑1 GCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCG > 1:1389048/1‑35 GCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCG < 1:16666720/35‑1 CGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGG < 1:18722093/35‑1 CGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGG < 1:19848530/35‑1 CGGCGCGCAGTACCCTGCCGAGCATAACGTCGGGG > 1:11647137/1‑35 CGGCGCGCAGTACCCTGCCGAGCATAACGTCGGGG > 1:14213556/1‑35 GGCGCGCAGTACCCTGCCGAGCATAACGTCGGGcg > 1:19406406/1‑33 GGCGCGCAGTACCCTGCCGAGCATAACGTCGGGGG > 1:4003540/1‑35 GCGCGCAGTACCCTTCCGAGCATAACGTCGGGGGg > 1:14190980/1‑34 GCGCGCAGTACCCTGCCGAGCATAACGTCGGGGcg > 1:10060314/1‑33 GCGCGCAGTACCCTGCCGAGCATAACGTCGGGCGT > 1:11030691/1‑35 CGCGCAGTACCCTGCCGAGCATAACGTCGGGGGgt > 1:12481939/1‑33 GCGCAGTACCCTGCCGAGCATAACGTCGGGGGcgt > 1:15718224/1‑32 GCGCAGTACCCTGCCGAGCATAACGTCGGGGGTTT > 1:14629470/1‑35 GCGCAGTACCCTGCCGAGCATAACGTCGGGGGTTT > 1:15252824/1‑35 GCGCAGTACCCTGCCGAGCATAACGTCGGGGGGTT > 1:10700903/1‑35 GCGCAGTACCCTGCCGAGCATAACGTCGGGGGGTT > 1:1836624/1‑35 CGCAGTACCCTGCCGAGCATAACGTCGGGGGTTTG > 1:11689061/1‑35 CGCAGTACCCTGCCGAGCATAACGTCGGGGGGTTt > 1:16122291/1‑34 GCAGTACCCTGCCGAGCATAACGTCGGGGGTTTtt > 1:1784548/1‑33 GCAGTACCCTGCCGAGCATAACGTCGGGGGCTTGT > 1:13438375/1‑35 AGTACCCTGCCTAGCATAACGTCGGGGGTTTGTTT > 1:19566853/1‑35 AGTACCCTGCCGAGCATAACGTCGGGGGTTTTTTT > 1:10724678/1‑35 AGTACCCTGCCGAGCATAACGTCGGGGGTTTGTTT > 1:2099526/1‑35 AGTACCCTGCCGAGCATAACGTCGGGGGTTTGTTT > 1:6130990/1‑35 AGTACCCTGCCGAGCATAACGTCGGGGGGTTGTTT > 1:17978284/1‑35 GTACCCTGCCGAGCATAACGTCGGGGGTTTTTTTA > 1:19259092/1‑35 GTACCCTGCCGAGCATAACGTCGGGGGTTTGTTTA > 1:9077867/1‑35 GTACCCTGCCGAGCATAACGTCGGGGGTTTGTTTA > 1:18030506/1‑35 TACCCTGCCGAGCATAACGTCGGGGGTTTGTTTta > 1:9718289/1‑33 ACCCTGCCGAGCATAACGTCGGGGGTTTGTTTAaa > 1:5807797/1‑33 CGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAA > 1:10203531/1‑35 CGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAA > 1:11350703/1‑35 CGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAA < 1:11869863/35‑1 CGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAA > 1:13379784/1‑35 CGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAA > 1:15057937/1‑35 CGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAA < 1:4557813/35‑1 CGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAA > 1:19998198/1‑35 CGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAA < 1:19610090/35‑1 GGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAAT > 1:14144553/1‑35 GGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAAT > 1:2760637/1‑35 GGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAAT < 1:9627458/35‑1 GGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATT < 1:5249767/35‑1 GGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATT < 1:3395061/35‑1 GGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATT < 1:7434416/35‑1 GGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATT > 1:18727524/1‑35 GGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATT < 1:19018367/35‑1 GGGGTTTGTTTATTTCTACGAGGTGCAGGGCAATT > 1:15312742/1‑35 AGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2174981‑2175017 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATT < REL606/4351424‑4351391 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |