Predicted mutation
evidence seq id position mutation freq annotation gene description
RA REL606 4,100,183 A→G 100% S350P (TCT→CCT)  hslU ← ATP‑dependent protease ATP‑binding subunit

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6064,100,1830A→G100.0% 483.2 139S350P (TCT→CCT) hslUATP‑dependent protease ATP‑binding subunit
Reads supporting (aligned to +/- strand):  new base (54/85):  ref base (0/0):  total (54/85)

Only 100 of 141 total aligned reads displayed.

CGCCATCAGTGCTTTGTACTGCACGGTGATAGAGGCATTCGGCTCGGTCAGAATACGCTCGAAG  >  REL606/4100151‑4100214
                                |                               
cGCCATCAGTGCTTTGTACTGCACGGTGATAGGgg                               <  1:13855544/35‑1 (MQ=255)
cGCCATCAGTGCTTTGTACTGCACGGTGATAGGgg                               <  1:796030/35‑1 (MQ=255)
cGCCATCAGTGCTTTGTACTGCACGGTGATAGGgg                               <  1:11597512/35‑1 (MQ=255)
 gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc                              >  1:17871286/1‑35 (MQ=255)
 gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc                              <  1:13281745/35‑1 (MQ=255)
 gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc                              <  1:13117162/35‑1 (MQ=255)
 gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc                              <  1:20028032/35‑1 (MQ=255)
 gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc                              <  1:5763019/35‑1 (MQ=255)
 gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc                              >  1:10611631/1‑35 (MQ=255)
 gCCATCAGTGCTTTGTACTGCACGGTGATAGGGGc                              <  1:8550566/35‑1 (MQ=255)
  ccATCAGTGCTTTGTACTGCACGGTGATAGGGGCa                             >  1:8351863/1‑35 (MQ=255)
   cATCAGTGCTTTGTACTGCACGGTGATAGGGGCAt                            >  1:6092139/1‑35 (MQ=255)
   cATCAGTGCTTTGTACTGCACGGTGATAGGGGCAt                            <  1:18638200/35‑1 (MQ=255)
   cATCAGTGCTTTGTACTGCACGGTGATAGGGGCAt                            <  1:17418399/35‑1 (MQ=255)
     tCAGTGCTTTGTACTGCACGGTGATAGGGGCATTc                          <  1:4143621/35‑1 (MQ=255)
     tCAGTGCTTTGTACTGCACGGTGATAGGGGCATTc                          <  1:2265120/35‑1 (MQ=255)
     tCAGTGCTTTGTACTGCACGGTGATAGGGGCATTc                          <  1:18705815/35‑1 (MQ=255)
     tCAGTGCTTTGTACTGCACGGTGATAGGGGCATTc                          <  1:13661706/35‑1 (MQ=255)
     tCAGTGCTTTGTACTGCACGGTGATAGGGGCATTc                          <  1:10015879/35‑1 (MQ=255)
     tCAGTGCTTTGTACTGCACGGTGATAGGGGCATTc                          <  1:10740674/35‑1 (MQ=255)
      cAGTGCTTTGTACTGCACGGTGATAGGGGCATTCg                         <  1:6669309/35‑1 (MQ=255)
      cAGTGCTTTGTACTGCACGGTGATAGGGGCATTCg                         >  1:4079900/1‑35 (MQ=255)
      cAGTGCTTTGTACTGCACGGTGATAGGGGCATTCg                         <  1:10034679/35‑1 (MQ=255)
      cAGTGCTTTGTACTGCACGGTGATAGGGGCATTCg                         >  1:1802361/1‑35 (MQ=255)
      cAGTGCTTTGTACTGCACGGTGATAGGGGCATTCg                         <  1:12380941/35‑1 (MQ=255)
       aGTGCTTTGTACTGCACGGTGGTAGGGGCATTCgg                        <  1:13657603/35‑1 (MQ=38)
       aGTGCTTTGTACTGCACGGTGATAGGGGCATTCgg                        >  1:5529004/1‑35 (MQ=255)
       aGTGCTTTGTACTGCACGGTGATAGGGGCATTCgg                        <  1:8995654/35‑1 (MQ=255)
       aGTGCTTTGTACTGCACGGTGATAGGGGCATTCgg                        >  1:7402214/1‑35 (MQ=255)
       aGTGCTTTGTACTGCACGGTGATAGGGGCATTCgg                        <  1:709013/35‑1 (MQ=255)
       aGTGCTTTGTACTGCACGGTGATAGGGGCATTCgg                        <  1:5192996/35‑1 (MQ=255)
        gTGCTTTGTACTGCACGGTGATAGGGGCATTCGGc                       >  1:7724212/1‑35 (MQ=255)
        gTGCTTTGTACTGCACGGTGATAGGGGCATTCGGc                       >  1:10161403/1‑35 (MQ=255)
        gTGCTTTGTACTGCACGGTGATAGGGGCATTCGGc                       >  1:16639694/1‑35 (MQ=255)
        gTGCTTTGTACTGCACGGTGATAGGGGCATTCGGc                       >  1:17585700/1‑35 (MQ=255)
         tGCTTTGTACTGCACGGTGATAGGGGCATTCGGCt                      <  1:844084/35‑1 (MQ=255)
         tGCTTTGTACTGCACGGTGATAGGGGCATTCGGCt                      <  1:5435178/35‑1 (MQ=255)
         tGCTTTGTACTGCACGGTGATAGGGGCATTCGGCt                      <  1:17418604/35‑1 (MQ=255)
         tGCTTTGTACTGCACGGTGATAGGGGCATTCGGCt                      <  1:9200487/35‑1 (MQ=255)
          gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc                     >  1:20352546/1‑35 (MQ=255)
          gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc                     <  1:2830020/35‑1 (MQ=255)
          gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc                     <  1:19671241/35‑1 (MQ=255)
          gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc                     <  1:13108997/35‑1 (MQ=255)
          gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc                     >  1:8091110/1‑35 (MQ=255)
          gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc                     <  1:3915193/35‑1 (MQ=255)
          gCTTTGTACTGCACGGTGATAGGGGCATTCGGCTc                     <  1:17081130/35‑1 (MQ=255)
           cTTTGTACTGCACGGTGATAGGGGCATTCGGCTCg                    <  1:13211770/35‑1 (MQ=255)
           cTTTGTACTGCACGGTGATAGGGGCATTCGGCTCg                    <  1:6764151/35‑1 (MQ=255)
           cTTTGTACTGCACGGTGATAGGGGCATTCGGCTCg                    >  1:18346551/1‑35 (MQ=255)
           cTTTGTACTGCACGGTGATAGGGGCATTCGGCTCg                    <  1:3256461/35‑1 (MQ=255)
           cTTTGTACTGCACGGTGATAGGGGCATTCGGCTCg                    <  1:15165816/35‑1 (MQ=255)
           cTTTGTACTGCACGGTGATAGGGGCATTCGGCTCg                    <  1:16079319/35‑1 (MQ=255)
            tttGTACTGCACGGTGATAGGGGCATTCGGCTCgg                   >  1:2404673/1‑35 (MQ=255)
            tttGTACTGCACGGTGATAGGGGCATTCGGCTCgg                   >  1:1415148/1‑35 (MQ=255)
            tttGTACTGCACGGTGATAGGGGCATTCGGCTCgg                   >  1:20505823/1‑35 (MQ=255)
             ttGTACTGCACGGTGATAGGGGCATTCGGCTCggg                  >  1:17020672/1‑34 (MQ=255)
             ttGTACTGCACGGTGATAGGGGCATTCGGCTCggg                  >  1:15378430/1‑34 (MQ=255)
             ttGTACTGCACGGTGATAGGGGCATTCGGCTCggg                  >  1:18142540/1‑34 (MQ=255)
             ttGTACTGCACGGTGATAGGGGCATTCGGCTCggg                  >  1:11833561/1‑34 (MQ=255)
             ttGTACTGCACGGTGATAGGGGCATTCGGCTCGGt                  <  1:8909580/35‑1 (MQ=255)
             ttGTACTGCACGGTGATAGGGGCATTCGGCTCGGt                  <  1:14656007/35‑1 (MQ=255)
             ttGTACTGCACGGTGATAGGGGCATTCGGCTCGGt                  <  1:16585580/35‑1 (MQ=255)
              tGTACTGCACGGTGATAGGGGCATTCGGCTCGGTc                 <  1:2001888/35‑1 (MQ=255)
              tGTACTGCACGGTGATAGGGGCATTCGGCTCGGTc                 <  1:6580470/35‑1 (MQ=255)
               gTACTGCACGGTGATAGGGGCATTCGGCTCGGTCa                >  1:9902961/1‑35 (MQ=255)
               gTACTGCACGGTGATAGGGGCATTCGGCTCGGTCa                <  1:5151778/35‑1 (MQ=255)
               gTACTGCACGGTGATAGGGGCATTCGGCTCGGTCa                <  1:6699674/35‑1 (MQ=255)
               gTACTGCACGGTGATAGGGGCATTCGGCTCGGTCa                >  1:20537926/1‑35 (MQ=255)
               gTACTGCACGGTGATAGGGGCATTCGGCTCGGGCa                >  1:15847396/1‑35 (MQ=37)
                tACTGCACGGTGATAGGGGCATTCGGCTCGGGCAg               >  1:5269004/1‑35 (MQ=37)
                 aCTGCACGGTGATAGGGGCATTCGGCTCGGTCAGa              <  1:16240211/35‑1 (MQ=255)
                 aCTGCACGGTGATAGGGGCATTAGGCTCGGTCAGa              <  1:11720149/35‑1 (MQ=37)
                  cTGCACGGTGATAGGTGCATTCGGCTCCGGCAGaa             >  1:19439427/1‑35 (MQ=16)
                  cTGCACGGTGATAGGGGCATTCGGCTCGGTCAGaa             <  1:6400774/35‑1 (MQ=255)
                  cTGCACGGTGATAGGGGCATTCGGCTCGGTCAGaa             <  1:6190625/35‑1 (MQ=255)
                  cTGCACGGTGATAGGGGCATTCGGCTCGGGCAGaa             >  1:2014072/1‑35 (MQ=37)
                  cTGCACGGTGATAGGGGCATTCGGCTCGGGCAGaa             >  1:14491527/1‑35 (MQ=37)
                   tGCACGGTGATAGGGGCATTCGGCTCGGTCAGAAt            <  1:5515781/35‑1 (MQ=255)
                   tGCACGGTGATAGGGGCATTCGGCTCGGTAAGAAt            <  1:2423327/35‑1 (MQ=37)
                   tGCACGGTGATAGGGGCATTCGGCTCGGGCAGGAt            >  1:9494549/1‑35 (MQ=25)
                   tGCACGGTGATAGGGGCATTCGGCTCGGGCAGAAt            >  1:3520178/1‑35 (MQ=37)
                    gCACGGTGATAGGGTCATTCGGCTCGGTCAGAATa           <  1:3967650/35‑1 (MQ=38)
                    gCACGGTGATAGGGGCATTCGGCTCGGGCCGAATa           >  1:9942075/1‑35 (MQ=25)
                    gCACGGTGATAGGGGCATTCGGCTCGGGCAGAATa           >  1:5846989/1‑35 (MQ=37)
                     catggTGATAGGGGCATTCGGCTCGGGCCGAATAc          >  1:7632434/4‑35 (MQ=19)
                     cACGGTGATAGGGGCGTTGGGCTCGGTCAGAATAc          <  1:476074/35‑1 (MQ=255)
                     cACGGTGATAGGGGCATTCGGCTCGGTCAGAATAc          <  1:1865477/35‑1 (MQ=255)
                      aCGGTGATAGGGGCATTCGGCTCGGTCAGAATACg         <  1:14146317/35‑1 (MQ=255)
                        ggTGATAGGGGCATTCGGCTCGGTCAGAATACGCt       <  1:16412481/35‑1 (MQ=255)
                        ggTGATAGGGGCATTCGGCTCGGTCAGAATACGCt       <  1:17054113/35‑1 (MQ=255)
                        ggTGATAGGGGCATTCGGCTCGGGCAGAATACGCt       >  1:15770422/1‑35 (MQ=37)
                         gTGATAGGGGCATTCGGCTCGGTCAGAATACGCTc      <  1:17681707/35‑1 (MQ=255)
                         gTGATAGGGGCATTCGGCTCGGTCAGAATACGCTc      <  1:13443531/35‑1 (MQ=255)
                         gTGATAGGGGCATTCGGCTCGGTCAGAATACGCTc      <  1:4491759/35‑1 (MQ=255)
                         gTGATAGGGGCATTCGGCTCGGTCAGAATACGCTc      <  1:6959506/35‑1 (MQ=255)
                          tGATAGGGGCATTCGGCTCGGTCAGAATACGCTCg     <  1:7914686/35‑1 (MQ=255)
                          tGATAGGGGCATTCGGCTCGGTCAGAATACGCTCg     <  1:20229864/35‑1 (MQ=255)
                            aTAGGGGCATTCGGCTCGGTCAGAATACGCTCGaa   <  1:15543532/35‑1 (MQ=255)
                            aTAGGGGCATTCGGCTCGGTCAGAATACGCTCGaa   <  1:12232240/35‑1 (MQ=255)
                             tAGGGGCATTCGGCTCGGTCAGAATACGCTCGAAg  <  1:18373005/35‑1 (MQ=255)
                                |                               
CGCCATCAGTGCTTTGTACTGCACGGTGATAGAGGCATTCGGCTCGGTCAGAATACGCTCGAAG  >  REL606/4100151‑4100214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.