New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3040638 | 93 (0.910) | 11 (0.140) | 3/38 | NT | 14.8% | coding (649/810 nt) | pppA | bifunctional prepilin leader peptidase/ methylase |
? | REL606 | 4567447 = | 53 (0.650) | coding (1808/2151 nt) | yjiY | predicted inner membrane protein |
Only 100 of 140 total aligned reads displayed.
CGCCCAGGTGGTGCAGATAAGCAGCCATACAGCCGGAACAACAGTTACCCAGATGTATTGGGTGCGCTT > REL606/4567413‑4567481 | gcCCAGGTGGTGCAGATAAGCAGCCATACAGCCgt > 1:1068151/1‑34 (MQ=255) gcCCAGGTGGTGCAGATAAGCAGCCATACAGCCgg > 1:12654589/1‑35 (MQ=255) ccAGGTGGTGCAGATAAGCAGCCATACAGCCggga > 1:4121242/1‑33 (MQ=255) ccAGGTGGTGCAGATAAGCAGCCATACAGCCGGaa > 1:14272449/1‑35 (MQ=255) ccAGGTGGTGCAGATAAGCAGCCATAAAGCCGGaa > 1:7710148/1‑35 (MQ=255) ccAGGTGGGGCAGATAAGCAGCCATACAGCCGGaa > 1:10018213/1‑35 (MQ=255) cAGGTGGTGCAGATAAGCAGCCGTACAGCCGGaac > 1:3549123/1‑35 (MQ=255) cAGGTGGTGCAGATAAGCAGCCATACAGCCGGaac > 1:8121655/1‑35 (MQ=255) cAGGTGGTGCAGATAAGCAGCCATACAGCCGGaac > 1:18016559/1‑35 (MQ=255) cAGGTGGTGCAGATAAGCAGCCATACAGCCGGaac > 1:8208183/1‑35 (MQ=255) cAGGTGGTGCAGATAAGCAGCCATACAGCCGGaac > 1:9438217/1‑35 (MQ=255) aGGTGGTGCAGATAAGCAGCCATACAGCCGGaaca > 1:4446219/1‑35 (MQ=255) aGGTGGTGCAGATAAGCAGCCATACAGCCGGaaca > 1:5932120/1‑35 (MQ=255) aGGTGGTGCAGATAAGCAGCCATACAGCCGGaaca > 1:14390080/1‑35 (MQ=255) gtggtgCAGATAAGCAGCCATACAGCCGGagcaac > 1:13053417/1‑35 (MQ=255) gtggtgCAGATAAGCAGCCATACAGCCGGaacaac > 1:15513746/1‑35 (MQ=255) ggtgCAGATAAGCAGCCATACAGCCGGAACAACAg > 1:19934759/1‑35 (MQ=255) ggtgCAGATAAGCAGCCATACAGCCGGAACAACAg > 1:19710066/1‑35 (MQ=255) gtgCAGATAAGCAGCCATACAGCCGGAACAACAGt > 1:4132090/1‑35 (MQ=255) tgCAGATAAGCAGCCATACAGCCGGAACAACAGtt > 1:7705011/1‑35 (MQ=255) tgCAGATAAGCAGCCATACAGCCGGAACAACAGtt > 1:17438717/1‑35 (MQ=255) tgCAGATAAGCAGCCATACAGCCGGAACAACAGtt > 1:20151430/1‑35 (MQ=255) gCAGATAAGCAGCCATACAGCCGGAACAACAGTTa > 1:20100606/1‑35 (MQ=255) gCAGATAAGCAGCCATACAGCCGGAACAACAGTTa > 1:2712544/1‑35 (MQ=255) gCAGATAAGCAGCCATACAGCCGGAACAACAGTTa > 1:15098426/1‑35 (MQ=255) gCAGATAAGCAGCCATACAGCCGGAACAACAGTTa > 1:10371687/1‑35 (MQ=255) gCAGATAAGCAGCCATACAGCCGGAACAACAGTTa > 1:9417778/1‑35 (MQ=255) cAGATAAGCATCCATACAGCCGGAACAACAGTTAc > 1:8756168/1‑35 (MQ=255) cAGATAAGCAGCCATACAGCCGGAACAACAGTTAc > 1:14138415/1‑35 (MQ=255) aGATAAGCAGCCATACAGCCGGAACAACAGTTAcc > 1:5463914/1‑35 (MQ=255) aGATAAGCAGCCATACAGCCGGAACAACAGTTAcc > 1:7398894/1‑35 (MQ=255) gATAAGCAGCCATACAGCCGGAACAACAGTTAccc > 1:3815941/1‑35 (MQ=255) gATAAGCAGCCATACAGCCGGAACAACAGTTAccc > 1:16096217/1‑35 (MQ=255) gATAAGCAGCCATACAGCCGGAACAACAGTTAccc > 1:16244567/1‑35 (MQ=255) aTAAGCAGCCATACAGCCGGAACAACAGTTACCCa > 1:2585523/1‑35 (MQ=255) aTAAGCAGCCATACAGCCGGAACAACAGTTACCCa > 1:18436255/1‑35 (MQ=255) aTAAGCAGCCATACAGCCGGAACAACAGTTACCCa > 1:1731102/1‑35 (MQ=255) aTAAGCAGCCATACAGCCGGAACAACAGTTACCCa > 1:8343498/1‑35 (MQ=255) aTAAGCAGCCATACAGCCGGAACAACAGTTACCCa > 1:15628750/1‑35 (MQ=255) tAAGCAGCCATACAGCCGGAACAACAGTTACCCAg > 1:3476294/1‑35 (MQ=255) aaGCAGCCATACAGCCGGAACAACAGTTACCCAGa > 1:3269957/1‑35 (MQ=255) aaGCAGCCATACAGCCGGAACAACAGTTACCCAGa > 1:10518710/1‑35 (MQ=255) aaGCAGCCATACAGCCGGAACAACAGTTACCCAGa > 1:14333969/1‑35 (MQ=255) aaGCAGCCATACAGCCGGAACAACAGTTACCCAGa > 1:14068663/1‑35 (MQ=255) aaGCAGCCATACAGCCGGAACAACAGTTACCCAGa > 1:17332779/1‑35 (MQ=255) agcagcCATACAGCCGGAACAACAGTTACCCAGAt > 1:6679484/1‑35 (MQ=255) agcagcCATACAGCCGGAACAACAGTTACCCAGAt > 1:11227175/1‑35 (MQ=255) gcagcCATACAGCCGGAACAACAGTTACCCAGATg > 1:9158187/1‑35 (MQ=255) ccacccacccagccGGAACAACAGTTACCCAGATg < 1:10956590‑M2/21‑1 (MQ=255) cccccgcccagccGGAACAACAGTTACCCAGATGt < 1:5289687‑M2/22‑1 (MQ=255) cccccacccagccGGAACAACAGTTACCCAGATGt < 1:187896‑M2/22‑1 (MQ=255) cagcCATACAGCCGGAACAACAGTTACCCAGATGt > 1:14865607/1‑35 (MQ=255) cagcCATACAGCCGGAACAACAGTTACCCAGATGt > 1:11655172/1‑35 (MQ=255) cagcCATACAGCCGGAACAACAGCTACCCAGATGt > 1:15522453/1‑35 (MQ=255) cacccacccagccGGAACAACAGTTACCCAGATGt < 1:5220360‑M2/22‑1 (MQ=255) cacccacccagccGGAACAACAGTTACCCAGATGt < 1:17550392‑M2/22‑1 (MQ=255) gcccatccagccGGAACAACAGTTACCCAGATGTa < 1:18790681‑M2/23‑1 (MQ=255) agccacccagccGGAACAACAGTTACCCAGATGTa < 1:19533533‑M2/23‑1 (MQ=255) acccccccagccGGAACAACAGTTACCCAGATGTa < 1:13013277‑M2/23‑1 (MQ=255) gcCATACAGCCGGAACAACAGTTACCCAGATGTAt > 1:5932099/1‑35 (MQ=255) gcCATACAGCCGGAACAACAGTTACCCAGATGTAt > 1:3391657/1‑35 (MQ=255) cccccccagccGGAACAACAGTTACCCAGATGTAt < 1:11014267‑M2/24‑1 (MQ=255) cccacccagccGGAACAACAGTTACCCAGATGTAt < 1:15161398‑M2/24‑1 (MQ=255) cccacccagccGGAACAACAGTTACCCAGATGTAt < 1:17217790‑M2/24‑1 (MQ=255) ccacccagccGGAACAACAGTTACCCAGATGTAtt < 1:18266741‑M2/25‑1 (MQ=255) ccATACAGCCTGAACAACAGTTACCCAGATGTAtt > 1:5602961/1‑35 (MQ=255) ccATACAGCCGGAACAACAGTTACCCAGATGTAtt > 1:4329641/1‑35 (MQ=255) ccATACAGCCGGAACAACAGTTACCCAGATGTAtt > 1:7190957/1‑35 (MQ=255) tgcccagccGGAACAACAGTTACCCAGATGTATTg < 1:9235084‑M2/26‑1 (MQ=255) cATACAGCCGGAACAACAGTTACCCAGATGTATTg > 1:7191454/1‑35 (MQ=255) acccagccGGAACAACAGTTACCCAGATGTATTgg < 1:12326781‑M2/27‑1 (MQ=255) aTACAGCCGGAACAACAGTTACCCAGATGTATTgg > 1:9870320/1‑35 (MQ=255) tACAGCCGGAACAACAGTTACCCAGATGTATTggg > 1:4404846/1‑35 (MQ=255) cccagccGGAACAACAGTTACCCAGATGTATTggg < 1:11440962‑M2/28‑1 (MQ=255) cccagccGGAACAACAGTTACCCAGATGTATTggg < 1:17993111‑M2/28‑1 (MQ=255) ccagccGGAACAACAGTTACCCAGATGTATTGGGt < 1:8729975‑M2/29‑1 (MQ=255) ccagccGGAACAACAGTTACCCAGATGTATTGGGt < 1:9791203‑M2/29‑1 (MQ=255) ccagccGGAACAACAGTTACCCAGATGTATTGGGt < 1:308512‑M2/29‑1 (MQ=255) aCAGCCGGAACAACAGTTACCCAGATGTATTGGGt > 1:20460446/1‑35 (MQ=255) cagccGGAACAACAGTTACCCAGATGTATTGGGTg < 1:8503302‑M2/30‑1 (MQ=255) cagccGGAACAACAGTTACACAGATGTATTGGGTg < 1:11602959‑M2/30‑1 (MQ=255) agccGGAACAACAGTTACCCAGATGTATTGGGTgc < 1:11074648‑M2/31‑1 (MQ=255) agccGGAACAACAGTTACCCAGATGTATTGGGTgc < 1:8811065‑M2/31‑1 (MQ=255) agccGGAACAACAGTTACCCAGATGTATTGGGTgc < 1:10861550‑M2/31‑1 (MQ=255) gccGGAACAACAGTTACCCAGATGTATTGGGTgcg < 1:9228813‑M2/32‑1 (MQ=255) gccGGAACAACAGTTACCCAGATGTATTGGGTgcg > 1:13317056‑M2/4‑35 (MQ=255) gccGGAACAACAGTTACCCAGATGTATTGGGTgcg > 1:10207181‑M2/4‑35 (MQ=255) gccGGAACAACAGTTACCCAGATGTATTGGGTgcg > 1:5760437‑M2/4‑35 (MQ=255) ccGGAACAACAGTTACCCAGATGTATTGGGTgcgc > 1:8571920‑M2/3‑35 (MQ=255) ccGGAACAACAGTTACCCAGATGTATTGGGTgcgc < 1:15765030‑M2/33‑1 (MQ=255) ccGGAACAACAGTTACCCAGATGTATTGGGTgcgc < 1:15829767‑M2/33‑1 (MQ=255) ccGGAACAACAGTTACCCAGATGTATTGGGTgcgc < 1:10869296‑M2/33‑1 (MQ=255) cGGAACAACAGTTACCCAGATGTATTGGGTGCGCt > 1:10389870‑M2/2‑35 (MQ=255) cGGAACAACAGTTACCCAGATGTATTGGGTGCGCt > 1:7274518‑M2/2‑35 (MQ=255) cGGAACAACAGTTACCCAGATGTATTGGGTGCGCt < 1:19330989‑M2/34‑1 (MQ=255) cGGAACAACAGTTACCCAGATGTATTGGGTGCGCt > 1:3350689‑M2/2‑35 (MQ=255) ggAGCAACAGTTACCCAGATGTATTGGGTGCGCtt < 1:17926198/35‑1 (MQ=255) ggAACAACAGTTACCCAGATGTATTGGGTGCGCtt < 1:7351111/35‑1 (MQ=255) ggAACAACAGTTACCCAGATGTATTGGGTGCGCtt < 1:6812566/35‑1 (MQ=255) ggAACAACAGTTACCCAGATGTATTGGGTGCGCtt > 1:6657178/1‑35 (MQ=255) | CGCCCAGGTGGTGCAGATAAGCAGCCATACAGCCGGAACAACAGTTACCCAGATGTATTGGGTGCGCTT > REL606/4567413‑4567481 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |