New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1499429 | 88 (0.860) | 12 (0.150) | 6/38 | NT | 14.1% | coding (1346/2127 nt) | ECB_01413 | conserved hypothetical protein |
? | REL606 | 1692278 = | 76 (0.930) | coding (806/864 nt) | pdxY | pyridoxine kinase |
Only 100 of 158 total aligned reads displayed.
ATGTTCTGGTTTGGCAATACGATCCTGAGCAGCCACCACTTGCAGCTCATATTCCTGCATTGCTTTGGT > REL606/1692244‑1692312 | aTGTTCTGGTTTGGCAATACGATCCTGAGCAGcca > 1:10162196/1‑35 (MQ=255) aTGTTCTGGTTTGGCAATACGATCCTGAGCAGcca < 1:17941183/35‑1 (MQ=255) aTGTTCTGGTTTGGCAATACGATCCTGAGCAGcca < 1:15741986/35‑1 (MQ=255) aTGTTCTGGTTTGGCAATACGATCCTGAGCAGcca > 1:8952244/1‑35 (MQ=255) ttCTGGTTTGGCAATACGATCCTGAGCAGccacca > 1:18794947/1‑35 (MQ=255) ttCTGGTTTGGCAATACGATCCTGAGCAGccacca > 1:6105916/1‑35 (MQ=255) ttCTGGTTTGGCAATACGATCCTGAGCAGccacca > 1:9054413/1‑35 (MQ=255) tCTGGTTTGGCAATACGATCCTGAGCAGCcaccac > 1:15082083/1‑35 (MQ=255) tCTGGTTTGGCAATACGATCCTGAGCAGCcaccac > 1:4362107/1‑35 (MQ=255) cTGGTTTGGCAATACGATCCTGAGCAGCCACCACt > 1:17092948/1‑35 (MQ=255) tGGTTTGGCAATACGATCCTGAGCAGCCACCACtt > 1:14535917/1‑35 (MQ=255) tGGTTTGGCAATACGATCCTGAGCAGCCACCACtt > 1:5615141/1‑35 (MQ=255) tGGTTTGGCAATACGATCCTGAGCAGCCACCACtt > 1:11889543/1‑35 (MQ=255) tGGTTTGGCAATACGATCCTGAGCAGCCACCACtt > 1:17315112/1‑35 (MQ=255) ggTTTGGCAATACGATCCTGAGCAGCCACCACTTg > 1:912078/1‑35 (MQ=255) ggTTTGGCAATACGATCCTGAGCAGCCACCACTTg > 1:16560420/1‑35 (MQ=255) ggTTTGGCAATACGATCCTGAGCAGCCACCACTTg > 1:18374367/1‑35 (MQ=255) gTTTGGCAATACGATCCTGAGCAGCCACCACTTGc > 1:6370809/1‑35 (MQ=255) gTTTGGCAATACGATCCTGAGCAGCCACCACTTGc > 1:10327994/1‑35 (MQ=255) tttGGCAATACGATCCTGAGCAGCCACCACTTGCa > 1:17893959/1‑35 (MQ=255) tttGGCAATACGATCCTGAGCAGCCACCACTTGCa > 1:5910092/1‑35 (MQ=255) tttGGCAATACGATCCTGAGCAGCCACCACTTGCa > 1:260529/1‑35 (MQ=255) ttGGCAATACGATCCTGAGCAGCCACCACTTGCAg > 1:16340403/1‑35 (MQ=255) ttGGCAATACGATCCTGAGCAGCCACCACTTGCAg > 1:9741389/1‑35 (MQ=255) ttGGCAATACGATCCTGAGCAGCCACCACTTGCAg > 1:8943832/1‑35 (MQ=255) tGGCAATACGATCCTGAGCAGCCACCACTTGCAGc > 1:13906096/1‑35 (MQ=255) ggCAATACGATCCTGAGCAGCCACCACTTGCAGCt > 1:19148572/1‑35 (MQ=255) ggCAATACGATCCTGAGCAGCCACCACTTGCAGCt > 1:993449/1‑35 (MQ=255) ggCAATACGATCCTGAGCAGCAACCACTTGCAGCt < 1:8290837/35‑1 (MQ=255) gCAATACGATCCTGAGCAGCCACCACTTGCAGCTc > 1:13156307/1‑35 (MQ=255) gCAATACGATCCTGAGCAGCCACCACTTGCAGCTc > 1:9775887/1‑35 (MQ=255) gCAATACGATCCTGAGCAGCCACCACTTGCAGCTc > 1:10875748/1‑35 (MQ=255) gCAATACGATCCTGAGCAGCCACCACTTGCAGCTc > 1:296881/1‑35 (MQ=255) cAATACGATCCTGAGCAGCCACCACTTGCAGCTCa > 1:9560015/1‑35 (MQ=255) aaTACGATCCTGAGCAGCCACCACTTGCAGCTCat > 1:2006442/1‑35 (MQ=255) aaTACGATCCTGAGCAGCCACCACTTGCAGCTCat > 1:4140370/1‑35 (MQ=255) aaTACGATCCTGAGCAGCCACCACTTGCAGCTCat > 1:9232748/1‑35 (MQ=255) aTACGATCCTGAGCAGCCACCACTTGCAGCTCata > 1:6443759/1‑35 (MQ=255) aTACGATCCTGAGCAGCCACCACTTGCAGCTCata > 1:7266049/1‑35 (MQ=255) tACGATCCTGAGCAGCCACCACTTGCAGCTCatat > 1:12486649/1‑35 (MQ=255) tACGATCCTGAGCAGCCACCACTTGCAGCTCatat > 1:5884171/1‑35 (MQ=255) tACGATCCTGAGCAGCCACCACTTGCAGCTCatat > 1:14809309/1‑35 (MQ=255) tACGATCCTGAGCAGCCACCACTTGCAGCTCatat > 1:19062866/1‑35 (MQ=255) gcgacccggaccagccACCACTTGCAGCTCATAtt < 1:276754‑M2/19‑1 (MQ=255) aCGATCCTGAGCAGCCACCACTTTCAGCTCATAtt > 1:12684025/1‑35 (MQ=255) aCGATCCTGAGCAGCCACCACTTGCAGCTCATAtt > 1:16316757/1‑35 (MQ=255) ctaTCCTGACCAGCCACCACTTGCAGCTCATGTTc < 1:15019827/33‑1 (MQ=25) cgccccggaccagccACCACTTGCAGCTCATATTc < 1:13427519‑M2/20‑1 (MQ=255) cgaccctgaccagccACCACTTGCAGCTCATATTc < 1:8643418‑M2/20‑1 (MQ=255) cgacccggaccagccACCACTTGCAGCTCATATTc < 1:10084924‑M2/20‑1 (MQ=255) cGATCCTGAGCAGCCACCACTTGCAGCTCATATTc > 1:11964003/1‑35 (MQ=255) cGATCCTGAGCAGCCACCACTTGCAGCTCATATTc > 1:1810083/1‑35 (MQ=255) cGATCCTGAGCAGCCACCACTTGCAGCTCATATTc > 1:17664306/1‑35 (MQ=255) gatccggaccagccACCACTTGCAGCTCATATTcc < 1:11736599‑M2/21‑1 (MQ=255) gATCCTGAGCAGCCACCCCTTGCAGCTCATATTcc > 1:17862657/1‑35 (MQ=255) gATCCTGAGCAGCCACCACTTGCAGCTCATATTcc > 1:905331/1‑35 (MQ=255) gATCCTGAGCAGCCACCACTTGCAGCTCATATTcc > 1:13690567/1‑35 (MQ=255) accctgaccagccACCACTTGCAGCTCATATTCCt < 1:11464230‑M2/22‑1 (MQ=255) aTCCTGAGCAGCCACCACTTGCAGCTCATATTCCt > 1:7290884/1‑35 (MQ=255) aTCCTGACCAGCCACCACTTGCAGCTCATATTCCt < 1:3555855/35‑1 (MQ=255) tCCTGAGCAGCCACCACTTGCAGCTCATATTCCTg > 1:7519403/1‑35 (MQ=255) tCCTGAGCAGCCACCACTTGCAGCTCATATTCCTg > 1:4656239/1‑35 (MQ=255) tCCTGAGCAGCCACCACTTGCAGCTCATATTCCTg > 1:14891167/1‑35 (MQ=255) cccggcccagccACCACTTGCAGCTCATATTCCTg < 1:18738431‑M2/23‑1 (MQ=255) ccggaccagccACCACTTGCAGCTCATATTACTGc < 1:1376535‑M2/24‑1 (MQ=255) cgggccagccACCACTTGCAGCTCATATTCCTGCa < 1:6739339‑M2/25‑1 (MQ=255) cggcccagccACCACTTGCAGCTCATATTCCTGCa < 1:15982189‑M2/25‑1 (MQ=255) cggaccagccACCACTTGCAGCTCATATTCCTGCa < 1:15072871‑M2/25‑1 (MQ=255) ccgAGCAGCCACCACTTGCAGCTCATATTCCTGCa < 1:19996521/33‑1 (MQ=255) cTGAGCAGCCACCACTTGCAGCTCATATTCCTGCa < 1:18768872/35‑1 (MQ=255) tgaccagccACCACTTGCAGCTCATATTCCTGCAt < 1:11901462‑M2/26‑1 (MQ=255) tGAGCAGCCACCACTTGCAGCTCATATTCCTGCAt > 1:3890789/1‑35 (MQ=255) gggccagccACCACTTGCAGCTCATATTCCTGCAt < 1:9574507‑M2/26‑1 (MQ=255) ggaccagccACCACTTGCAGCTCATATTCCTGCAt < 1:16324782‑M2/26‑1 (MQ=255) gAGCAGCCACCACTTGCAGCTCATATTCCTGCAtt > 1:1595551/1‑35 (MQ=255) cgccagccACCACTTGCAGCTCATATTCCTGCAtt < 1:6847400‑M2/27‑1 (MQ=255) aaccagccACCACTTGCAGCTCATATTCCTGCAtt < 1:16675901‑M2/27‑1 (MQ=255) gccagccACCACTTGCAGCTCATATTCCTGCATTn < 1:179258‑M2/28‑1 (MQ=255) cccagccACAACTTGCAGCTCATATTCCTGCATTg < 1:6895095‑M2/28‑1 (MQ=255) cccagccACAACTTGCAGCTCATATTCCTGCATTg < 1:777253‑M2/28‑1 (MQ=255) accagccACCACTTGCAGATCATATTCCTGCATTg < 1:517149‑M2/28‑1 (MQ=255) gcagcCACCACTTGCAGCTCATATTCCTGCATTGc > 1:6653116/1‑35 (MQ=255) gcagcCACCACTTGCAGCTCATATTCCTGCATTGc > 1:12973578/1‑35 (MQ=255) gcagcAACCACTTGCAGCTCATATTCCTGCATTGc < 1:16973741/35‑1 (MQ=255) ccagccACCACTTGCAGCTCATATTCCTGCATTGc < 1:5017184‑M2/29‑1 (MQ=255) cagccACCACTTGCAGCTCATATTCCTGCATTGCt > 1:17405769‑M2/6‑35 (MQ=255) agccACCACTTGCAGCTCATATTCCTGCATTGCtt > 1:12598625‑M2/5‑35 (MQ=255) agccACCACTTGCAGCTCATATTCCTGCATTGCtt > 1:15634409‑M2/5‑35 (MQ=255) agccACCACTTGCAGCTCATATTCCTGCATTGCtt > 1:3320896‑M2/5‑35 (MQ=255) gccACCACTTGCAGCTCATATTCCTGCATTGCttt > 1:2600830‑M2/4‑35 (MQ=255) gccACCACTTGCAGCTCATATTCCTGCATTGCttt > 1:10687993‑M2/4‑35 (MQ=255) gccACCACTTGCAGCTCATATTCCTGCATTGCttt < 1:10106947‑M2/32‑1 (MQ=255) ccACCACTTGCAGCTCATATTCCTGCATTGCTTTg < 1:1119625‑M2/33‑1 (MQ=255) ccACCACTTGCAGCTCATATTCCTGCATTGCTTTg > 1:181136‑M2/3‑35 (MQ=255) ccACAACTTGCAGCTCATATTCCTGCATTGCTTTg < 1:18608239‑M2/33‑1 (MQ=255) caaccacTTGCAGCTCATATTCCTGCATTGCTTtn < 1:16807179/33‑1 (MQ=255) accacTTGCAGCTCATATTCCTGCATTGCTTtggt < 1:12662929/35‑1 (MQ=255) accacTTGCAGCTCATATTCCTGCATTGCTTtggt < 1:3482301/35‑1 (MQ=255) accacTTGCAGCTCATATTCCTGCATTGCTTtggt > 1:19477099/1‑35 (MQ=255) accacTTGCAGCTCATATTCCTGCATTGCTTtggt > 1:9385898/1‑35 (MQ=255) | ATGTTCTGGTTTGGCAATACGATCCTGAGCAGCCACCACTTGCAGCTCATATTCCTGCATTGCTTTGGT > REL606/1692244‑1692312 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |