New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 894104 =69 (0.670)17 (0.200) 5/40 NT 21.9% coding (646/1767 nt) ECB_00833 Terminase, ATPase subunit
?REL606 = 2195255 64 (0.750)coding (108/837 nt) yeiG predicted esterase

Only 100 of 276 total aligned reads displayed.

ACTGCCCGATGACGTTCAGTATCTTTCTCCCCCCCCCTCGTGATCACACCCCGCCACCAGTGCTGTACT  >  REL606/2195221‑2195289
                                  |                                  
aCTGCCCGATGACGTTCAGTATCTTTCTccccccc                                    >  1:18728722/1‑35 (MQ=255)
 cTGCCCGATGACGTTCAGTATCTTTCTCCCCCCCc                                   >  1:16792981‑M2/1‑34 (MQ=255)
 atgCCCGATGACGTTCAGTATCTTTCTCCCCCCCc                                   <  1:4244187‑M2/34‑2 (MQ=255)
  tccccGAGGCCGTTCAGTATCTTTCTccccccgcc                                  <  1:15813185/33‑1 (MQ=25)
    cccGATGACGTTCAGTATCTTTCTCCCCCCCcctc                                >  1:11730036‑M2/1‑31 (MQ=255)
    cccGATGACGTTCAGTATCTTTCTCCCCCCCcctc                                >  1:5987283‑M2/1‑31 (MQ=255)
    cccGATGACGTTCAGTATCTTTCTCCCCCCCcctc                                <  1:14272057‑M2/35‑5 (MQ=255)
     ccGATGACGTTCAGTATCTTTCTCCCCCCCCCTCg                               <  1:7184212/35‑1 (MQ=255)
     ccGATGACGTTCAGTATCTTTCTCCCCCCCCCTCg                               <  1:2243257/35‑1 (MQ=255)
     acGATGACGTTCAGTATCTTTCTCCCCCCCCCTCg                               <  1:20192738/34‑1 (MQ=255)
      cGATGCCGTTCAGTATCTTTCTCCCCCCCCCTCGt                              <  1:17752573/35‑1 (MQ=255)
      cGATGACGTTCAGTATCTTTCTCCCCCCCCCTCGt                              >  1:18263077/1‑35 (MQ=255)
      cGATGACGTTCAGTATCTTTCTCCCCACCCCTCGt                              <  1:19286424/35‑1 (MQ=255)
       gATGACGTTCAGTATCTTTCTCCCCCCCCCTCGTg                             >  1:11835288/1‑35 (MQ=255)
       gATGACGTTCAGTATCTTTCTCCCCCCCCCTCGTg                             <  1:13917769/35‑1 (MQ=255)
       gATGACGTTCAGTATCTTTCTCCCCCCCCCTCGTg                             <  1:9408073/35‑1 (MQ=255)
         tGACGTTCAGTATCTTTCTCCCCCCCCCTCGTGAt                           >  1:3485339/1‑35 (MQ=255)
          gACGTTCAGTATCTTTCTCCCCCCCCCCCGGGATc                          >  1:14436110/1‑35 (MQ=38)
           aCGTTCAGTATCTTTCTCCCCCCCCCTCGTGATca                         <  1:2546321/35‑1 (MQ=255)
           aCGTTCAGTATCTTTCTCCCCCCCCCTCGTGATca                         <  1:9212157/35‑1 (MQ=255)
           aCGTTCAGTATCTTTCTCCCCCCCCCTCGTGATca                         <  1:4974663/35‑1 (MQ=255)
             gTTCAGTATCTTTCTCCCCCCCCCTCGTGATcaca                       <  1:6064389/35‑1 (MQ=255)
             gTTCAGTATCTTTCTCCCCCCCCCTCGTGATcaca                       >  1:6373624/1‑35 (MQ=255)
             gTTCAGTATCTTTCTCCCCCCCCCTCGTGATcaca                       >  1:7501086/1‑35 (MQ=255)
               tCAGTATCTTTCTCCCCCCCCCTCGTGATCACAcc                     <  1:2706165/35‑1 (MQ=255)
               tCAGTATCTTTCTCCCCCCCCCTCGTGATCACAcc                     >  1:17559889/1‑35 (MQ=255)
               tCAGTATCTTTCTCCCCCCCCCTCGTGATCACAcc                     <  1:8091603/35‑1 (MQ=255)
                cAGTATCTTTCTCCCCCCCCCTCGTGATCACAccc                    <  1:16053738/35‑1 (MQ=255)
                cAGTATCTTTCTCCCCCCCCCTCGTGATCACAccc                    <  1:5211117/35‑1 (MQ=255)
                cAGTATCTTTCTCCCCCCCCCTCGTGATCACAccc                    <  1:14977933/35‑1 (MQ=255)
                 aGTATCTTTCTCCCCCCCCTCGTGATCACACCCCg                  >  1:1311240/1‑35 (MQ=38)
                  gTATCTTTCTCCCCCCCCCTCGTGATCACACCCCg                  <  1:13032021/35‑1 (MQ=255)
                  gTATCTTTCTCCCCCCCCCTCGTGATAACACCCCg                  <  1:8437216/35‑1 (MQ=255)
                  gTATCTTTCGCCCCCCCCCTCGTGATCACACCCCg                  <  1:385142/35‑1 (MQ=255)
                   tATCTTTCTCCCCCCCCCTCGTGATCACACCCCGc                 <  1:10712183/35‑1 (MQ=255)
                     tCTTTTTCCCCCCCCCccagcctcttccagagagg               <  1:19952501‑M1/35‑20 (MQ=255)
                     tCTTTTTCCCCCCCCCccagcctcttccagagagg               <  1:17923659‑M1/35‑20 (MQ=255)
                     tCTTTCTCCCCCCCCCTCGTGATCACACCCCGcca               >  1:12193237/1‑35 (MQ=255)
                     tCTTTCTCCCCCCCCCTCGTGATCACACCCCGcca               >  1:6641147/1‑35 (MQ=255)
                     tCTTTCTCCCCCCCCCTCGTGATCACACCCCGcca               <  1:7907239/35‑1 (MQ=255)
                     cctTTCCCCCCCCCCCcccagccgaaagaacacgc               <  1:17123500‑M1/34‑20 (MQ=255)
                      ctctctccccCCCCCccagcctcttccagagaggt              <  1:5473196‑M1/32‑21 (MQ=255)
                      cTTTCTCTCCCCCCCcccagccgaaagaacacgcg              <  1:9691252‑M1/35‑21 (MQ=255)
                      cTTTCTCCCCCCCCCcccagccgaaagaacacgcg              <  1:6224068‑M1/35‑21 (MQ=255)
                       tttCCCCCCCCCcctccacttctttggcgaagtcg             >  1:6528053‑M2/1‑12 (MQ=255)
                       tctctcccCCCCCCcccaccacaatcaactgaccg             <  1:6267970‑M1/33‑22 (MQ=255)
                        ttCTCCCCCCCCCccagcctcttccagagaggttt            <  1:3785471‑M1/35‑23 (MQ=255)
                        ttCCCCCCCCCcctccacttctttggcgaagtcga            >  1:20533481‑M2/1‑11 (MQ=255)
                         tttcccCCCCCCccagcctcttccagagaggtttt           <  1:18043575‑M1/33‑24 (MQ=255)
                         tctcCCCCCCCCTCGTGATCACACCCCGCCACCAg           >  1:568697/1‑35 (MQ=255)
                         tctcCCCCCCCCTCGTGATCACACCCCGCCACCAg           <  1:7131465/35‑1 (MQ=255)
                         tcccCCCCCCcctccacttctttggcgaagtcgat           >  1:3865143‑M2/1‑10 (MQ=255)
                         cccccccccccctccacttctttggcgaagtcgat           >  1:17377735‑M2/4‑10 (MQ=255)
                         cccccccccccccccagccgaaagaacacgcgggc           <  1:8341584‑M1/32‑24 (MQ=255)
                          ttccCCCCCCCccagcctcttccagagaggttttc          <  1:4184400‑M1/34‑25 (MQ=255)
                          cctccccccccccagcctcttccagagaggttttc          <  1:13760063‑M1/32‑25 (MQ=255)
                          ccccccccccctccacttctttggcgaagtcgatg          >  1:438524‑M2/3‑9 (MQ=255)
                          ccccccccccccccagccgaaagaacacgcgggca          <  1:7861022‑M1/33‑25 (MQ=255)
                          ccccccccccccccaccacaatcaactgaccgctc          <  1:12831873‑M1/33‑25 (MQ=255)
                          ccccccccccccccaccacaatcaactgaccgctc          <  1:12396703‑M1/33‑25 (MQ=255)
                           tcCCCCCCCCccagcctcttccagagaggttttca         <  1:14528436‑M1/35‑26 (MQ=255)
                           cccccccccctccacttctttggcgaagtcgatga         >  1:17313450‑M2/2‑8 (MQ=255)
                            gcccccccccccagccgaaagaacacgcgggcagc        <  1:4079758‑M1/34‑27 (MQ=255)
                            ccccccccccccagccgaaagaacacgcgggcagc        <  1:12004824‑M1/35‑27 (MQ=255)
                            ccccccccccccaccacaatcaactgaccgctcgg        <  1:11059529‑M1/35‑27 (MQ=255)
                            cccccccccccagcctcttccagagaggttttcaa        <  1:16276847‑M1/35‑27 (MQ=255)
                            cccccccccTCGTGATCACACCCCGCCACCAGTga        >  1:13781689/1‑34 (MQ=255)
                            acccccgcccccaccacaatcaactgaccgctcgg        <  1:2330272‑M1/34‑27 (MQ=255)
                             cccccccctccacttctttggcgaagtcgatgatg       >  1:16501825‑M2/1‑6 (MQ=255)
                             cccccccccccagccgaaagaacacgcgggcagcg       <  1:7833057‑M1/35‑28 (MQ=255)
                             cccccccccccaccacaatcaactgaccgctcggc       <  1:6843107‑M1/35‑28 (MQ=255)
                             cccccccccccaccacaatcaactgaccgctcggc       <  1:15402944‑M1/35‑28 (MQ=255)
                             cccccccccccaccacaatcaactgaccgctcggc       <  1:9862403‑M1/35‑28 (MQ=255)
                             cccccccccccaccacaatcaactgaccgctcggc       <  1:19050041‑M1/35‑28 (MQ=255)
                             ccccccccccagcctcttccagagaggttttcaac       <  1:3598326‑M1/35‑28 (MQ=255)
                             ccccccccTCGTGATCACACCCCGCCACCAGTGCt       >  1:20395704/1‑35 (MQ=255)
                             ccccccccTCGTGATCACACCCCGCCACCAGTGCt       >  1:2011287/1‑35 (MQ=255)
                             acccccccccagcctcttccagagaggttttcaac       <  1:19447600‑M1/34‑28 (MQ=255)
                              tcccccccccagccgaaagaacaagcgggcagcgc      <  1:796520‑M1/34‑29 (MQ=255)
                              ccccccctccacttctttggcgaagtcgatgatgt      >  1:14741605‑M2/1‑5 (MQ=255)
                              ccccccccccaccacaatcaactgaccgctcggcg      <  1:16557702‑M1/35‑29 (MQ=255)
                              cccccccTCGTGATCACACCCCGCCACCAGTGCTg      >  1:18844042/1‑35 (MQ=255)
                              cccccccTCGTGATCACACCCAGCCACCAGTGCTg      <  1:4884854/35‑1 (MQ=255)
                               cccccctccacttctttggcgaagtcgatgatgta     >  1:10389026‑M2/1‑4 (MQ=255)
                               cccccccccaccacaatcaactgaccgctcggcgc     <  1:19771894‑M1/35‑30 (MQ=255)
                               ccccccccagcctcttccagagaggttttcaactc     <  1:8595385‑M1/35‑30 (MQ=255)
                               ccccccTCGTGATCACACCCCGCCACCAGTGCTGt     >  1:13234872/1‑35 (MQ=255)
                                gcccccccaccacaatcaactgaccgctcggcgcg    <  1:3415487‑M1/34‑31 (MQ=255)
                                cccccccagcctcttccagagaggttttcaactca    <  1:12928156‑M1/35‑31 (MQ=255)
                                cccccccagcctcttccagagaggttttcaactca    <  1:461153‑M1/35‑31 (MQ=255)
                                cccccTCGTGATCACACCCCGCCACCAGTGCTGTa    <  1:8727718/35‑1 (MQ=255)
                                cccccTCGTGATCACACCCCGCCACCAGTGCTGTa    <  1:11584711/35‑1 (MQ=255)
                                 cccctccacttctttggcgaagtcgatgatgtact   >  1:1833631‑M2/1‑2 (MQ=255)
                                 cccccccagccgaaagaacacgcgggcagcgcgca   <  1:12696586‑M1/35‑32 (MQ=255)
                                 ccccccagcctcttccagagaggttttcaactcat   <  1:9963074‑M1/35‑32 (MQ=255)
                                 ccccccagcctcttccagagaggttttcaactcat   <  1:15166292‑M1/35‑32 (MQ=255)
                                  ccctccacttctttggcgaagtcgatgatgtactg  >  1:3978737‑M2/1‑1 (MQ=255)
                                  ccctccacttctttggcgaagtcgatgatgtactg  >  1:1961598‑M2/1‑1 (MQ=255)
                                  cccccccccacaatcaactgaccgctcggcgcgtc  <  1:1492124‑M1/35‑33 (MQ=255)
                                  ccccccaccacaatcaactgaccgctcggcgcgtc  <  1:10066521‑M1/35‑33 (MQ=255)
                                  |                                  
ACTGCCCGATGACGTTCAGTATCTTTCTCCCCCCCCCTCGTGATCACACCCCGCCACCAGTGCTGTACT  >  REL606/2195221‑2195289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.