Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 4,110,237 IS150 (–) +3 bp 100% coding (296‑298/2433 nt) metL → bifunctional aspartate kinase II/homoserine dehydrogenase II

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 3893554 =NA (NA)139 (1.480) 43/44 NT 100% noncoding (1/1443 nt) IS150 repeat region
?REL606 4110237 = 0 (0.000)coding (296/2433 nt) metL bifunctional aspartate kinase II/homoserine dehydrogenase II
* ? REL606 = 3894996NA (NA)79 (0.770) 28/48 NT 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 = 4110239 0 (0.000)coding (298/2433 nt) metL bifunctional aspartate kinase II/homoserine dehydrogenase II

Only 100 of 146 total aligned reads displayed.

AACTGGGTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATG  >  REL606/3893520‑3893586
                                      |                                
aaCTGGGTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACt                                  >  1:13942699/1‑35 (MQ=255)
aaCTGGGTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACt                                  <  1:12547314/35‑1 (MQ=255)
aaCTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTg                                 >  1:3574833/1‑35 (MQ=37)
aaCTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTg                                 <  1:4453475/35‑1 (MQ=37)
aaCTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTg                                 >  1:8703401/1‑35 (MQ=37)
 aCTGGGTACTCAGTTCGAAATCTAACGCC‑‑A‑‑GACTg                                 >  1:5880668/1‑35 (MQ=255)
 aCTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGt                                >  1:6001015/1‑35 (MQ=37)
 aCTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGt                                >  1:3397272/1‑35 (MQ=37)
 aCTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGt                                >  1:10403113/1‑35 (MQ=37)
  cTGGGTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGt                                >  1:2506492/1‑35 (MQ=255)
  cTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTa                               <  1:16408655/35‑1 (MQ=37)
  cTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTa                               >  1:43534/1‑35 (MQ=37)
  cTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTa                               >  1:387057/1‑35 (MQ=37)
  cTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTa                               >  1:8872603/1‑35 (MQ=37)
   tGGGTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTa                               <  1:17032937/35‑1 (MQ=255)
   tGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTAc                              >  1:7079601/1‑35 (MQ=38)
   tGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTAc                              >  1:407990/1‑35 (MQ=38)
   tGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTAc                              <  1:1877561/35‑1 (MQ=38)
   tGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTAc                              >  1:12404993/1‑35 (MQ=38)
   tGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTAc                              >  1:7838440/1‑35 (MQ=38)
    gggTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTAc                              <  1:12590829/35‑1 (MQ=255)
    gggTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTAc                              <  1:3814987/35‑1 (MQ=255)
    gggTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTAc                              <  1:2327570/35‑1 (MQ=255)
     ggTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACt                             <  1:4809957/35‑1 (MQ=255)
     ggTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACt                             <  1:17311730/35‑1 (MQ=255)
     ggTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACt                             <  1:14041386/35‑1 (MQ=255)
      gTACTCATGTCGAAATCTAACGCC‑‑‑‑GACTGTACTGc                           >  1:10712625/1‑35 (MQ=37)
      gTACTCAGGTCGAAATCTAACGCC‑‑AGGACTGTACt                             >  1:1687942/1‑35 (MQ=37)
      gTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTg                            <  1:7954058/35‑1 (MQ=255)
       tACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGc                           >  1:13813666/1‑35 (MQ=255)
        aCTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCa                          <  1:17349458/35‑1 (MQ=255)
        aCTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCa                          >  1:15360774/1‑35 (MQ=255)
        aCTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTACTGCAc                         <  1:2493460/35‑1 (MQ=38)
        aCTCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTACTGCAc                         >  1:14951548/1‑35 (MQ=38)
         cTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCAc                         >  1:12056090/1‑35 (MQ=255)
         cTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCAc                         <  1:10172757/35‑1 (MQ=255)
         cTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCAc                         <  1:17770085/35‑1 (MQ=255)
         cTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCAc                         <  1:13449550/35‑1 (MQ=255)
          tCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCAcc                        <  1:13422155/35‑1 (MQ=255)
          tCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTACTGCAccc                       <  1:20604119/35‑1 (MQ=38)
          tCAGGTCGAAATCTAACGCC‑‑‑‑GACTGTACTGCAccc                       >  1:9276157/1‑35 (MQ=38)
            aGGTCGAAATCTAACGCC‑‑AGGACTGTACTGCActc                       >  1:5969988/1‑33 (MQ=25)
             ggTCGAAATCTAACGCC‑‑AGGGACTGTACTGCAccc                       <  1:2156930/35‑1 (MQ=25)
             ggTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAt                     <  1:811712/35‑1 (MQ=255)
              gTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAtt                    >  1:11448860/1‑35 (MQ=255)
              gTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAtt                    >  1:18337572/1‑35 (MQ=255)
              gTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAtt                    <  1:3058667/35‑1 (MQ=255)
               tCGAAATCTAACGCC‑‑‑‑GACTGTACTGCACCCAtttt                  >  1:7868169/1‑35 (MQ=25)
               tCGAAATCTAACGCC‑‑‑‑GACTGTACTGCACCCAtttt                  >  1:12577838/1‑35 (MQ=25)
                cGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAtttt                  >  1:19607082/1‑35 (MQ=255)
                cGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAtttt                  <  1:12837366/35‑1 (MQ=255)
                cGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAtttt                  >  1:6247719/1‑35 (MQ=255)
                cGAAATCTAACGC‑‑A‑‑GACTGTACTGCACCCATTttg                 <  1:6078691/35‑1 (MQ=25)
                 gAAATCTAACGCCAGA‑‑GACTGTACTGCACCCAttt                   <  1:15502501/35‑1 (MQ=18)
                 gAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTttg                 >  1:7463737/1‑35 (MQ=255)
                 gAAATCTAACGCC‑‑‑‑GACTGTACTGCACCCATTttgt                <  1:12325836/35‑1 (MQ=21)
                  aaaTCTAACGCC‑‑AGGACTGTACTGCACCCATTttg                 >  1:9317411/1‑35 (MQ=21)
                  aaaTCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTttgt                >  1:4927337/1‑35 (MQ=255)
                  aaaTCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTttgt                >  1:3448004/1‑35 (MQ=255)
                   aaTCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTttgtt               >  1:9832759/1‑35 (MQ=255)
                    aTCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTttgttg              >  1:12575127/1‑35 (MQ=255)
                     tCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTgg             >  1:10230123/1‑35 (MQ=255)
                     tCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTgg             >  1:8016303/1‑35 (MQ=255)
                     tCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTgg             >  1:241903/1‑35 (MQ=255)
                     tCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTgg             >  1:19676540/1‑35 (MQ=255)
                      cTAACGCC‑‑A‑‑GACTGTACTTCACCCATTTTGTTggc            >  1:6462770/1‑34 (MQ=255)
                      cTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGa            <  1:9375308/35‑1 (MQ=255)
                      cTAACGCC‑‑‑‑GACTGTACTGCACCCATTTTGTTGGAc           <  1:5101731/35‑1 (MQ=17)
                      cTAACGCC‑‑‑‑GACTGTACTGCACCCATTTTGTTGGAc           <  1:3646778/35‑1 (MQ=17)
                       tAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTGGGAc           <  1:10046849/35‑1 (MQ=255)
                        aaCGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACg          >  1:11718126/1‑35 (MQ=255)
                        aaCGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACg          >  1:15502888/1‑35 (MQ=255)
                        aaCGCC‑‑A‑‑GACTGTACGGCACCCATTTTGTTGGACg          >  1:11160342/1‑35 (MQ=255)
                        aaCGCC‑‑‑‑GACTGTACTGCACCCATTTTGTTGGACGa         >  1:7885979/1‑35 (MQ=14)
                         aCGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGa         >  1:678807/1‑35 (MQ=255)
                         aCGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGa         >  1:7307590/1‑35 (MQ=255)
                          cGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGAt        >  1:19050878/1‑35 (MQ=255)
                          cGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGAt        <  1:7521486/35‑1 (MQ=255)
                            cc‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGa      >  1:11225130/1‑35 (MQ=255)
                            cc‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGa      >  1:11600026/1‑35 (MQ=255)
                            cc‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGa      <  1:13220283/35‑1 (MQ=255)
                             c‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGaa     >  1:18691505/1‑35 (MQ=40)
                             c‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGaa     >  1:3007875/1‑35 (MQ=40)
                                gccgACTGTACTGCACCCATTTTGTTGGACGATGa      <  1:11701875/32‑1 (MQ=255)
                                gccgACTGTACTGCACCCATTTTGTTGGACGATGa      >  1:19070967/4‑35 (MQ=255)
                                cccgACTGTACTGCACCCATTTTGTTGGACGATGa      <  1:11748627/32‑1 (MQ=255)
                                a‑‑GACTGTACTGCACCCATTTTGTTGGACGATGaaa    >  1:12036791/1‑35 (MQ=38)
                                a‑‑GACTGTACTGCACCCATTTTGTTGGACGATGaaa    >  1:514955/1‑35 (MQ=38)
                                 ccgACTGTACTGCACCCATTTTGTTGGACGATGaa     >  1:18274383/3‑35 (MQ=25)
                                  cgACTGTACTGCACCCATTTTGTTGGACGATGaaa    >  1:3903288/2‑35 (MQ=25)
                                  cgACTGTACTGCACCCATTTTGTTGGACGATGaaa    <  1:1657623/34‑1 (MQ=25)
                                  aaaCTGTACTGCACCCATTTTGTTGGACGATGaaa    >  1:8413227/3‑35 (MQ=17)
                                   gACTGTACTGCACCCATTTTGTTGGACGATGAAAt   <  1:14295949/35‑1 (MQ=35)
                                   gACTGTACTGCACCCATTTTGTTGGACGATGAAAt   >  1:15295427/1‑35 (MQ=35)
                                   gACTGTACTGCACCCATTTTGTTGGACGATGAAAt   >  1:4768112/1‑35 (MQ=35)
                                   gACTGTACTGCACACATTTTGTTGGACGATGAAAt   <  1:5519752/35‑1 (MQ=255)
                                    aCTGTACTGCACCCATTTTGTTGGACGATGAAATg  >  1:3816741/1‑35 (MQ=32)
                                    aCTGTACTGCACCCATTTTGTTGGACGATGAAATg  >  1:2436271/1‑35 (MQ=32)
                                    aCTGTACTGCACCCATTTTGTTGGACGATGAAATg  >  1:7309178/1‑35 (MQ=32)
                                    aCTGTACTGCACCCATTTTGTTGGACGATGAAATg  >  1:6324007/1‑35 (MQ=32)
                                      |                                
AACTGGGTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATG  >  REL606/3893520‑3893586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.