New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 471760 = | 64 (0.620) | 13 (0.140) | 5/42 | NT | 15.0% | coding (281/960 nt) | aes | acetyl esterase |
? | REL606 | 3912266 = | 91 (1.010) | intergenic (+46/‑94) | ilvL/ilvG | ilvG operon leader peptide/acetolactate synthase II, valine insensitive, large subunit |
ATAGCCCGGCGACGCTATTTTATTTGCATGGAGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/471796‑471760 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGGTTTTTTTTGA > REL606/3912266‑3912278 ATAGCCCGGCGACGCTATTTTATTTGCATGGAGGC > 1:6825190/1‑35 ATAGCCCGGCGACGCTATTTTATTTGCATGGAGGC < 1:7230435/35‑1 ATAGCCCGGCGACGCTATTTTATTTGCATGGAGGC > 1:12163766/1‑35 ATAGCCCGGCGACGCTATTTTATTTGCATGGAGGC > 1:17485269/1‑35 ATAGCCCGGCGACGCTATTTTATTTGCATGGAGGC > 1:15158573/1‑35 TAGCCCGGCGACGCTATTTTATTTGCATGGAGGCG > 1:6362888/1‑35 TAGCCCGGCGACGCTATTTTATTTGCATGGAGGCG > 1:18796789/1‑35 AGCCCGGCGACGCTATTTTATTTGCATGGAGGCGG < 1:5867762/35‑1 AGCCCGGCGACGCTATTTTATTTGCATGGAGGCGG < 1:17540802/35‑1 AGCCCGGCGACGCTATTTTATTTGCATGGAGGCGG < 1:13099057/35‑1 GCCCGGCGACGCTATTTTATTTGCATGGAGGCGGG > 1:2885918/1‑35 GCCCGGCGACGCTATTTTATTTGCATGGAGGCGGG > 1:12429985/1‑35 CCCGGCGACGCTATTTTATTTGCATGGAGGCGGGG > 1:931771/1‑35 CCCGGCGACGCTATTTTATTTGCATGGAGGCGGGG > 1:3822099/1‑35 CCCGGCGACGCTATTTTATTTGCATGGAGGCGGGG > 1:1820570/1‑35 CCGGCGACGCTATTTTATTTGCATGGAGGCTGGGG > 1:12898233/1‑35 CCGGCGACGCTATTTTATTTGCATGGAGGCGGGGG > 1:8906060/1‑35 CCGGCGACGCTATTTTATTTGCATGGAGGCGGGGG > 1:5356382/1‑35 CCGGCGACGCTATTTTATTTGCATGGAGGCGGGGG > 1:11420354/1‑35 CCGGCGACGCTATTTTATTTGCATGGAGGCGGGGG > 1:8880892/1‑35 CCGGCGACGCTATTTTATTTGCATGGAGGCGGGGG > 1:3339176/1‑35 CGGCGACGCTATTTTATTTGCATTGAGGCGGGGGg > 1:17411356/1‑34 CGGCGACGCTATTTTATTTGCATTGAGGCGGGGGg > 1:18243084/1‑34 CGGCGACGCTATTTTATTTGCATTGAGGCGGGGGg > 1:20558347/1‑34 CGGCGACGCTATTTTATTTGCATGGAGGCGGGGGg > 1:15767842/1‑34 GGCGACGCTATTTTATTTGCATGGAGGCGGGGGgt > 1:1296295/1‑33 GGCGACGCTATTTTATTTGCATGGAGGCGGGGGgg > 1:2849161/1‑33 GGCGACGCTATTTTATTTGCATGGAGGCGGGGGgg > 1:7149964/1‑33 GGCGACGCTATTTTATTTGCATGGAGGCGGGGGgg > 1:7517572/1‑33 GGCGACGCTATTTTATTTGCATGGAGGCGGGGGgg > 1:8497307/1‑33 GGCGACGCTATTTTATTTGCATGGAGGCGGGGGTg > 1:7150790/1‑34 GCGACGCTATTTTATTTGCATGGAGGCGGGGGggt > 1:1701827/1‑32 GCGACGCTATTTTATTTGCATGGAGGCGGGGGggg > 1:12050657/1‑32 GCGACGCTATTTTATTTGCATGGAGGCGGGGGTgt > 1:7510359/1‑33 CGACGCTATTTTATTTGCATGGAGGCGGGGGTgtg > 1:17353970/1‑32 CGACGCTATTTTATTTGCATGGAGGCGGGGGTggt > 1:17626877/1‑32 CGACGCTATTTTATTTGCATGGAGGCGGGGGTTTT > 1:869692/1‑35 CGACGCTATTTTATTTGCATGGAGGCGGGGGTGTT > 1:4725881/1‑35 CGACGCTATTTTATTTGCATGGAGGCGGGGGTGTT > 1:2192398/1‑35 CGACGCTATTTTATTTGCATGGAGGCGGGGGTGTT > 1:10630245/1‑35 GACGCTATTTTATTTGCATGGAGGCGGGGGTGTTT > 1:10761604/1‑35 CGCTATTTTATTTGCATGGAGGCGGGGGTGTTTTT > 1:13712156/1‑35 GCTATTTTATTTGCATGGAGGCGGGGGTTTTTTTT > 1:5547638/1‑35 GCTATTTTATTTGCATGGAGGCGGGGGTGTTTTTg > 1:19236493/1‑34 GCTATTTTATTTGCATGGAGGCGGGGGTGTTTTTT > 1:4783166/1‑35 GCTATTTTATTTGCATGGAGGCGGGGGGTTTTTTg > 1:12690822/1‑34 CTATTTTATTTGCATGGAGGCGGGGGTTTTTTTTG > 1:2375831/1‑35 CTATTTTATTTGCATGGAGGCGGGGGGTTTTTTTt > 1:17139773/1‑34 TATTTTATTTGCATGGAGGCGGGGGTTTGTTTTGg > 1:16976257/1‑34 ATAGCCCGGCGACGCTATTTTATTTGCATGGAGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/471796‑471760 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGGTTTTTTTTGA > REL606/3912266‑3912278 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |