New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 140702 = | 57 (0.550) | 10 (0.130) | 3/36 | NT | 18.6% | coding (817/1551 nt) | cueO | multicopper oxidase (laccase) |
? | REL606 | 1349560 = | 45 (0.580) | intergenic (‑152/+216) | fabI/ycjD | enoyl‑(acyl carrier protein) reductase/hypothetical protein |
Only 100 of 113 total aligned reads displayed.
TGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCT > REL606/140668‑140736 | tggtCTGCTACCTGAACCAGTGAAGGTGAGCGAAc > 1:2526174/1‑35 (MQ=255) tggtCTGCTACCTGAACCAGTGAAGGTGAGCGAAc < 1:13938575/35‑1 (MQ=255) tggtCTGCTACCTGAACCAGTGAAGGTGAGCGAAc < 1:17249287/35‑1 (MQ=255) tggtCTGCTACCTGAACCAGTGAAGGTGAGCGAAc > 1:5877232/1‑35 (MQ=255) tggtCTGCTACCTGAACCAGTGAAGGTGAGCGAAc < 1:11427608/35‑1 (MQ=255) tggtCTGCTACCTGAACCAGTGAAGGGGAGCGAAc > 1:11595492/1‑35 (MQ=255) ggtCTGCTACCTGAACCAGTGAAGGTGAGCGAACt > 1:5213665/1‑35 (MQ=255) ggtCTGCTACCTGAACCAGTGAAGGTGAGCGAACt > 1:526899/1‑35 (MQ=255) ggtCTGCTACCTGAACCAGTGAAGGTGAGCGAACt < 1:8333110/35‑1 (MQ=255) gtCTGCTACCTGAACCAGTGAAGGTGAGCGAACTg < 1:12106854/35‑1 (MQ=255) gtCTGCTACCTGAACCAGTGAAGGTGAGCGAACTg > 1:723391/1‑35 (MQ=255) gtCTGCTACCTGAACCAGTGAAGGGGAGCGAACTg > 1:5228988/1‑35 (MQ=255) tCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGc < 1:4725611/35‑1 (MQ=255) tCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGc < 1:19015728/35‑1 (MQ=255) tCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGc < 1:3350459/35‑1 (MQ=255) tGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCg > 1:19372742/1‑35 (MQ=255) tGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCg > 1:8352158/1‑35 (MQ=255) tGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCg > 1:16319012/1‑35 (MQ=255) gCTACCTGAACCAGTGAAGGTGAGCGACCTGCCgg < 1:16316768/35‑1 (MQ=255) cTACCTGAACCAGTGAAGGTGAGCGAACTGCCggg > 1:795394/1‑34 (MQ=255) cTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGt > 1:17965600/1‑35 (MQ=255) cTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGt > 1:490778/1‑35 (MQ=255) cTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGt > 1:5985232/1‑35 (MQ=255) aCCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGc > 1:19492771/1‑35 (MQ=255) aCCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGc > 1:6564722/1‑35 (MQ=255) aCCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGc > 1:94912/1‑35 (MQ=255) ccTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCt > 1:5782086/1‑35 (MQ=255) ccTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCt > 1:8035873/1‑35 (MQ=255) ccTGAACCAGTGAAGGTGAGCGAACCGCCGGTGCt > 1:5727851/1‑35 (MQ=255) tGAACCAGTGAAGGTGAGCTAACTGCCGGTGCTGa > 1:7893618/1‑35 (MQ=255) tGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGa > 1:19021677/1‑35 (MQ=255) tGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGa > 1:11951913/1‑35 (MQ=255) gAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGAt > 1:2926427/1‑35 (MQ=255) gAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGAt > 1:10447445/1‑35 (MQ=255) aaCCAGTGAATGTGAGCGAACTGCCGGGGCTGATg > 1:4691512/1‑35 (MQ=37) aaCCAGTGAAGGTGAGCGAACTGCCGGTGCTGATg > 1:17446285/1‑35 (MQ=255) aaCCAGTGAAGGTGAGCGAACTGCCGGTGCTGATg > 1:16836395/1‑35 (MQ=255) ccAGTGAATGTGAGCGAACTGCCGGTGCTCATggg > 1:10628347/1‑35 (MQ=25) ccAGTGAAGGTGAGCGAACTGCCGGTGCTGATggg > 1:9280222/1‑35 (MQ=255) ccAGTGAAGGTGAGCGAACTGCCGGTGCTGATggg > 1:16595118/1‑35 (MQ=255) cAGTGAAGGTTAGCGAACTGCCGGGGCTGATgggg > 1:4283193/1‑34 (MQ=37) cAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGc > 1:5259570/1‑35 (MQ=255) cAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGc > 1:12471207/1‑35 (MQ=255) aGTGAAGGTGAGCGAACTGCAGGTGCTGATGGGCg < 1:5519745/35‑1 (MQ=255) gTGAAGGTGAGCTAACTGCCGGTGCTGATGGGCGa > 1:1097700/1‑35 (MQ=255) gTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGa > 1:17074435/1‑35 (MQ=255) gTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGa > 1:8552119/1‑35 (MQ=255) tGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAg > 1:4669734/1‑35 (MQ=255) tGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAg > 1:14816816/1‑35 (MQ=255) gAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGc > 1:1749086/1‑35 (MQ=255) caggcgccccccCTGCCGGTGCTGATGGGCGAGCg > 1:10197234‑M1/13‑35 (MQ=255) aaGGTGAGCGAACTGCCGGTGCTGATGGGCGAggg > 1:9617762/1‑33 (MQ=255) aaGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCg > 1:4124430/1‑35 (MQ=255) aaGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCg > 1:11913071/1‑35 (MQ=255) aGGTGAGCGAACTGCCGGTGCTGATGTGCGAGCGt > 1:18252660/1‑35 (MQ=255) aGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGt > 1:6862378/1‑35 (MQ=255) aGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGt > 1:13045824/1‑35 (MQ=255) aGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGt > 1:19899784/1‑35 (MQ=255) cgccccccccCTGCCGGTGCTGATGGGCGAGCGtt > 1:2353287‑M1/11‑35 (MQ=255) gcgccccccCTGCCGGTGCTGATGGGCGAGCGttt > 1:6584695‑M1/10‑35 (MQ=255) gccccccccCTGCCGGTGCTGATGGGCGAGCGttt > 1:10630125‑M1/10‑35 (MQ=255) gTGAGCGAACTGCCGGTGCTGATGGGCGAGCGttt > 1:10795679/1‑35 (MQ=255) gTGAGCGAACTGCAGGTGCTGATGGGCGAGCGttt < 1:620248/35‑1 (MQ=255) tgccccccCTGCCGGTGCTGATGGGCGAGCGtttt > 1:3211972‑M1/9‑35 (MQ=255) tGAGCGAACTGCCGGTGCTGATGGGCGAGCGtttt > 1:8456143/1‑35 (MQ=255) tGAGCGAACTGCCGGTGCTGATGGGCGAGCGtttt > 1:16384661/1‑35 (MQ=255) cgcgccccCTGCCGGTGCTGATGGGCGAGCGtttt > 1:6676112‑M1/9‑35 (MQ=255) cgccccccCTGCCGGTGCTGATGGGCGAGCGtttt > 1:2646995‑M1/9‑35 (MQ=255) ccccccccCTGCCGGTGCTGATGGGCGAGCGtttt > 1:12848895‑M1/9‑35 (MQ=255) ccccccccCTGCCGGTGCTGATGGGCGAGCGtttt > 1:2862721‑M1/9‑35 (MQ=255) cagcccccCTGCCGGTGCTGATGGGCGAGCGtttt > 1:20277772‑M1/9‑35 (MQ=255) cgccccCTGCCGGTGCTGATGGGCGAGCGTTTTGa > 1:3262231‑M1/7‑35 (MQ=255) aGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGa > 1:8918869/1‑35 (MQ=255) aGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGa > 1:13449071/1‑35 (MQ=255) aGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGa > 1:3159006/1‑35 (MQ=255) gCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGaa > 1:4066981/1‑35 (MQ=255) gCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGaa > 1:9371053/1‑35 (MQ=255) cccccCTGCCGGTGCTGATGGGCGAGCGTTTTGaa > 1:18930136‑M1/6‑35 (MQ=255) cccccCTGCCGGTGCTGATGGGCGAGCGTTTTGaa > 1:10223976‑M1/6‑35 (MQ=255) ccccCTGCCGGTGCTGATGGGCGAGCGTTTTGAAg > 1:4503250‑M1/5‑35 (MQ=255) ccccCTGCCGGTGCTGATGGGCGAGCGTTTTGAAg > 1:20161530‑M1/5‑35 (MQ=255) cGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAg > 1:10107529/1‑35 (MQ=255) cGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAg > 1:15818594/1‑35 (MQ=255) gAACTGCTGGTGCTGATGGGCGAGCGTTTTGAAGt > 1:17792224/1‑35 (MQ=255) gAACTGCCGGTGCTTATGGGCGAGCGTTTTGAAGt > 1:1880210/1‑35 (MQ=255) gAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGt > 1:1076746/1‑35 (MQ=255) cccCTGCCGGTGCTGATGGGCGAGCGTTTTGAAGt > 1:14313660‑M1/4‑35 (MQ=255) cccCTGCCGGTGCTGATGGGCGAGCGTTTTGAAGt > 1:18493458‑M1/4‑35 (MQ=255) cccCTGCCGGTGCTGATGGGCGAGCGTTTTGAAGt > 1:14412090‑M1/4‑35 (MQ=255) aaCTGCCGGTGCTGATGGGCTAGCGTTTTGAAGTg > 1:7788159/1‑35 (MQ=255) aaCTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTg > 1:3953880/1‑35 (MQ=255) cCTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGc > 1:9850772‑M1/2‑35 (MQ=255) cCTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGc > 1:2959269‑M1/2‑35 (MQ=255) CTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCt > 1:8150555‑M1/1‑35 (MQ=255) CTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCt > 1:9133907‑M1/1‑35 (MQ=255) CTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCt > 1:10952812‑M1/1‑35 (MQ=255) CTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCt < 1:10711030‑M1/35‑1 (MQ=255) CTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCt > 1:785301‑M1/1‑35 (MQ=255) CTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCt < 1:5495352‑M1/35‑1 (MQ=255) CTGCCGGTGCTGATGGGCGAGCGTTTTAAAGTGCt > 1:9680457‑M1/1‑35 (MQ=255) | TGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCT > REL606/140668‑140736 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |