New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 932696 = | 61 (0.590) | 12 (0.180) | 3/32 | NT | 18.9% | coding (59/696 nt) | aqpZ | aquaporin Z |
? | REL606 | = 3040633 | 62 (0.910) | coding (654/810 nt) | pppA | bifunctional prepilin leader peptidase/ methylase |
AGCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/932737‑932696 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggctgGGTGGGGGCGTTATCACTGCCCAACGTT < REL606/3040633‑3040606 AGCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTG < 1:16809254/35‑1 AGCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTG < 1:10507667/35‑1 AGCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTG > 1:8165416/1‑35 AGCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTG > 1:17081680/1‑35 AGCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTG < 1:2529134/35‑1 AGCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTG < 1:4909238/35‑1 AGCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTG < 1:1238403/35‑1 GCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGG > 1:14288185/1‑35 GCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGG > 1:2465507/1‑35 GCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGG < 1:3283900/35‑1 GCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGG > 1:5062552/1‑35 GCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGG > 1:6725117/1‑35 GCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGG > 1:7752135/1‑35 CTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGT < 1:4261376/35‑1 CTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGT < 1:291949/35‑1 CTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGT > 1:14134124/1‑35 CTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGT < 1:11901202/35‑1 CTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGT < 1:20223746/35‑1 TGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTG < 1:4172468/35‑1 TGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTG < 1:4583777/35‑1 TGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTG > 1:19225729/1‑35 TGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTG > 1:17132988/1‑35 TGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTG < 1:16609612/35‑1 GAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGG > 1:3553642/1‑35 GAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGG < 1:20017716/35‑1 GAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGG > 1:8300262/1‑35 GAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGG > 1:10294218/1‑35 GAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGG < 1:11969353/35‑1 GAATGTTTTGGTACTTTATGGCTTGTTTTTGGTGG < 1:19850780/35‑1 AATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGC < 1:2380629/35‑1 AATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGC < 1:7103861/35‑1 AATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGC > 1:3880567/1‑35 ATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGgt > 1:2437992/1‑33 ATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGgt > 1:15084011/1‑33 ATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCT < 1:18970176/35‑1 ATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCT < 1:12668394/35‑1 ATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCT < 1:17249206/35‑1 ATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCT < 1:9687465/35‑1 TGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGGTG > 1:3618165/1‑35 TGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCTt > 1:9097101/1‑34 TGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCTG < 1:13181164/35‑1 TGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCTG < 1:1197132/35‑1 TGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCTG < 1:20199493/35‑1 TGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCTG > 1:20492704/1‑35 GTTTTGGTACTTTCTGGCTTGTTTTTTGTGGCTGG > 1:3590767/1‑35 GTTTTGGTACTTTCTGGCTTGTTTTTGGTGGGTGG > 1:15182456/1‑35 GTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCTGG > 1:13569776/1‑35 TTTTGGTACTTTCTGGCTTGTTTTTGGTGGCTGGG > 1:15622337/1‑35 TTTGGTACTTTCTGGCTTGTTTTTGGTGGCTGGGg > 1:13503916/1‑34 TTTGGTACTTTCTGGCTTGTTTTTGGTGGCTGGGg > 1:17016678/1‑34 TTTGGTACTTTCTGGCTTGTTTTTGGCGGCTGGGg > 1:13219171/1‑34 TTGGTACTTTCTGGCTTGTTTTTGGTGGCTGGGgg > 1:7737844/1‑33 TTGGTACTTTCTGGCTTGTTTTTGGTGGCTGGGgg > 1:5409885/1‑33 TTGGTACTTTCTGGCTTGTTTTTGGTGGCTGGGgg > 1:18576239/1‑33 TTGGTACTTTCTGGCTTGTTTTTGGTGGCTGGGgg > 1:2580358/1‑33 TGGTACTTTCTGGCTTGTTTTTGGTGGCTGGGGGG > 1:10831051/1‑35 GGTACTTTCTGGCTTGTTTTTGGTGGCTGGGGGGG > 1:11003722/1‑35 GGTACTTTCTGGCTTGTTTTTGGTGGCTGGGGGGG > 1:13849754/1‑35 GGTACTTTCTGGCTTGTTTTTGGTGGCTGGGGGGG > 1:17321129/1‑35 GGTACTTTCTGGCTTGTTTTTGGTGGCTGGGGGGG > 1:12108399/1‑35 GGTACTTTCTGGCTTGTTTTTGGTGGCTGGGGGGG > 1:20118680/1‑35 GTACTTTCTGGCTTGTTTTTGGTGGCTGGGGGGGG > 1:4724000/1‑35 GTACTTTCTGGCTTGTTTTTGGTGGCTGGGGGGGG > 1:20175815/1‑35 GTACTTTCTGGCTTGTTTTTGGTGGCTGGGGGGGG > 1:15965649/1‑35 TACTTTCTGGCTTGTTTTTGGTGGCTGGGGGGGGG > 1:5924314/1‑35 TACTTTCTGGCTTGTTTTTGGTGGCTGGGGGGGGG > 1:4651634/1‑35 ACTTTCTGGCTTGTTTTTGGTGGCTGGGGGGGGGg > 1:17952655/1‑34 ACTTTCTGGCTTGTTTTTGGTGGCTGGGGGGGGGg > 1:7412818/1‑34 GGTGGCTGGGTGGGGGCGTTATCACTGCCCAACGT < 1:14141979/35‑1 GGTGGCTGGGTGGGGGCGTTATCACTGCCCAACGT < 1:17123334/35‑1 GGTGGCTGGGTGGGGGCGTTATAACTGCCCAACGT < 1:15844783/35‑1 GGTGGCTAGGTGGGGGCGTTATCACTGCCCAACGT < 1:13006885/35‑1 GTGGCTGGGTGGGGGCGTTATCACTGCCCAACGTT < 1:7591460/35‑1 GTGGCTGGGTGGGGGCGTTATCACTGCCCAACGTT < 1:8158929/35‑1 AGCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/932737‑932696 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggctgGGTGGGGGCGTTATCACTGCCCAACGTT < REL606/3040633‑3040606 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |