New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 989609 | 56 (0.540) | 13 (0.160) | 4/38 | NT | 32.0% | coding (766/894 nt) | ycbJ | hypothetical protein |
? | REL606 | 2795469 = | 11 (0.140) | coding (831/873 nt) | ygcG | hypothetical protein |
Only 100 of 118 total aligned reads displayed.
GCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTT > REL606/989575‑989643 | gCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG > 1:13547320‑M1/1‑35 (MQ=255) gCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG < 1:6104612‑M1/35‑1 (MQ=255) gCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG > 1:12273941‑M1/1‑35 (MQ=255) ctctGGAGTTACCTGCAACGCGCGCCAGTGGCGGg > 1:10481470‑M1/1‑34 (MQ=255) tctGGAGTTACCTGCAACGCGCGCCAGTGGCGGgg > 1:7944263‑M1/1‑33 (MQ=255) tctGGAGTTACCTGCAACGCGCGCCAGTGGCGGAg < 1:15705779/35‑1 (MQ=255) ctGGAGTTACCTTCAACGCGCGCCAGTGGCGGggg > 1:4592357‑M1/1‑32 (MQ=255) ctGGAGTTACCTGCAACGCGCGCCAGTGGCGGggg > 1:8718294‑M1/1‑32 (MQ=255) ctGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGt < 1:3326295/35‑1 (MQ=255) tGGAGTTACGTGCAACGCGCGCCAGTGGCGGgggg > 1:14687469‑M1/1‑31 (MQ=255) tGGAGTTACCTGCAACGCGCGCCAGTGGCGGAggc > 1:19445057/1‑33 (MQ=255) tGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTc < 1:15821397/35‑1 (MQ=255) tGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTc < 1:19009727/35‑1 (MQ=255) tGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTc < 1:16947371/35‑1 (MQ=255) tGGAGTTACCTGCAACGCGCGCCAGTGGAGGAGTc < 1:5153718/35‑1 (MQ=255) ggAGTTACCTGCAACGCGCGCCAGTGGCGGgggcg > 1:3193225‑M1/1‑30 (MQ=255) ggAGTTACCTGCAACGCGCGCCAGTGGCGGgggca > 1:13625183‑M1/1‑30 (MQ=255) ggAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCg < 1:13956713/35‑1 (MQ=255) ggAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCg < 1:19480525/35‑1 (MQ=255) gAGTTACCTGCAACGCGCGCCAGTGGCGGgggcgt > 1:20112009‑M1/1‑29 (MQ=255) gAGTTACCTGCAACGCGCGCCAGTGGCGGgggcgg > 1:256790‑M1/1‑29 (MQ=255) gAGTTACCTGCAACGCGCGCCAGTGGCGGgggcgg > 1:3733318‑M1/1‑29 (MQ=255) gAGTTACCTGCAACGCGCGCCAGTGGCGGgggagt > 1:17837103‑M1/1‑29 (MQ=255) gAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGt < 1:5504490/35‑1 (MQ=255) gAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGt < 1:14549004/35‑1 (MQ=255) aGTTACCTGCAACGCGCGCCAGTGGCGGggggggt > 1:209421‑M1/1‑28 (MQ=255) aGTTACCTGCAACGCGCGCCAGTGGCGGgggcggt > 1:9407853‑M1/1‑28 (MQ=255) aGTTACCTGCAACGCGCGCCAGTGGCGGGGACGtt > 1:17833631/1‑35 (MQ=25) gTTACCTGCAACGCGCGCCAGTGGCGGggggggtc > 1:703186‑M1/1‑27 (MQ=255) gTTACCTGCAACGCGCGCCAGTGGCGGgggcggtg > 1:16866409‑M1/1‑27 (MQ=255) gTTACCTGCAACGCGCGCCAGTGGCGGgggcggtc > 1:17744746‑M1/1‑27 (MQ=255) gTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTc < 1:5841281/35‑1 (MQ=255) ttACCTGCAACGCGCGCCAGTGGCGGgggcggttc > 1:6223488‑M1/1‑26 (MQ=255) ttACCTGCAACGCGCGCCAGTGGCGGgggcggtcc > 1:17778729‑M1/1‑26 (MQ=255) ttACCTGCAACGCGCGCCAGTGGCGGgggcggtca > 1:1318561‑M1/1‑26 (MQ=255) ttACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCa < 1:19224003/35‑1 (MQ=255) ttACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCa < 1:20010347/35‑1 (MQ=255) ttACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCa < 1:17434508/35‑1 (MQ=255) ttACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCa < 1:4905307/35‑1 (MQ=255) ttACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCa < 1:12074042/35‑1 (MQ=255) ttACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCa < 1:16671630/35‑1 (MQ=255) tACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCAt < 1:17112127/35‑1 (MQ=255) aCCTGCAACGCGCGCCAGTGGCGGggtcggttctc > 1:11433879‑M1/1‑24 (MQ=255) aCCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATc < 1:2620691/35‑1 (MQ=255) ccTGCAACGCGCGCCAGTGGCGGGGGCGGTCTTCt > 1:1564773/1‑35 (MQ=16) ccTGCAACGCGCGCCAGTGGCGGGGGCGGTCCTCt > 1:14143038/1‑35 (MQ=16) ccTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCt < 1:20425202/35‑1 (MQ=255) ccTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCt < 1:17178532/35‑1 (MQ=255) cTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTg < 1:16716154/35‑1 (MQ=255) cTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTg < 1:19838959/35‑1 (MQ=255) cTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTg < 1:10970386/35‑1 (MQ=255) cTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTg < 1:18706471/35‑1 (MQ=255) tGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTgg < 1:13870409/35‑1 (MQ=255) tGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTgg < 1:28813/35‑1 (MQ=255) tGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTgg < 1:9048427/35‑1 (MQ=255) tGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTgg < 1:3953584/35‑1 (MQ=255) tGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTgg < 1:5770244/35‑1 (MQ=255) tGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTgg < 1:15177998/35‑1 (MQ=255) gCAACGCGCGCCAGTGGCGGAGTCGTTCATCTggc < 1:15463218/35‑1 (MQ=255) gCAACGCGCGCCAGTGGCGGAGTCGTTCATCTggc < 1:20571922/35‑1 (MQ=255) cAACGCGCGCCAGTGGCGGGGGCGGTCATCTggcg > 1:7161848/1‑35 (MQ=21) cAACGCGCGCCAGTGGCGGAGTCGTTCATCTggcg < 1:13490585/35‑1 (MQ=255) cAACGCGCGCCAGTGGCGGAGTCGTTCATCTggcg < 1:1722842/35‑1 (MQ=255) cAACGCGCGCCAGTGGCGGAGTCGTTCATCTggcg < 1:11296854/35‑1 (MQ=255) aaCGCGCGCCAGTGGCGGAGTCGTTCATCTggcgg < 1:17064050/35‑1 (MQ=255) aCGCGCGCCAGTGGCGGAGTCGTTCATCTggcggc < 1:13604323/35‑1 (MQ=255) aCGCGCGCCAGTGGCGGAGTCGTTCATCTggcggc < 1:3598148/35‑1 (MQ=255) aCGCGCGCCAGTGGCGGAGTCGTTCATCTggcggc < 1:14745836/35‑1 (MQ=255) aCGCGCGCCAGTGGCCGAGTCGTTCATCTggcggc > 1:18937952/1‑35 (MQ=255) gcgcgcCAGTGGCGGAGTCGTTCATCTGGCGGCgt < 1:10068010/35‑1 (MQ=255) cgcgcCAGTGGCGGAGTCGTTCATCTGGCGGCgtt < 1:17931460/35‑1 (MQ=255) cgcgcCAGTGGCGGAGTCGTTCATCTGGCGGCgtt < 1:4658216/35‑1 (MQ=255) cgcCAGTGGCGGAGTCGTTCATCTGGCGGCgttgg < 1:12717027/35‑1 (MQ=255) gcCAGTGGCGTAGTCGTTCATCTGGCGGGgttggt > 1:14066597/1‑35 (MQ=37) gcCAGTGGCGGAGTCGTTCATCTGGCGGCgttggt < 1:9466499/35‑1 (MQ=255) ccAGTGGCGGAGTCGTTCATCTGGCGGCgttggtt < 1:1749918/35‑1 (MQ=255) aGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGt < 1:14996/35‑1 (MQ=255) aGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGt < 1:12857899/35‑1 (MQ=255) gTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTa < 1:6685362/35‑1 (MQ=255) tGGCGGAGTCGTTCATCTGGCGGCGTTTGTTGTAt > 1:697871/1‑35 (MQ=255) ggCGGAGTCGTTCATCTGGCGGCGTTGGTTGTGtg > 1:4571466/1‑35 (MQ=255) ggCGGAGTCGTTCATCTGGCGGCGTTGGTTGTAtg < 1:13564908/35‑1 (MQ=255) ggCGGAGTCGTTCATCTGGCGGCGTTGGTTGTAtg < 1:19766202/35‑1 (MQ=255) gCGGgggcggttcttctggaggtggcggcgcatcc < 1:7857409‑M1/35‑32 (MQ=255) gCGGgggcggttcttctggaggtggcggcgcatcc < 1:15607195‑M1/35‑32 (MQ=255) gCGGAGTCGTTCATCTGGCGGCGTTGGTTGTAtgt < 1:9469854/35‑1 (MQ=255) gCGGAGTCGTTCATCTGGCGGCGTTGGTTGTAtgt < 1:1395538/35‑1 (MQ=255) cGGgggcggttcttctggaggtggcggcgcatccg < 1:17137562‑M1/35‑33 (MQ=255) cGGgggcggttcttctggaggtggcggcgcatccg < 1:3707507‑M1/35‑33 (MQ=255) cGGAGTCGTTCATCTGGCGGGGTTGGTTGGGtgtg > 1:12910914/1‑35 (MQ=25) cGGAGTCGTTCATCTGGCGGCGTTGGTTGTAtgtg > 1:4390359/1‑35 (MQ=255) cGGAGTCGTTCATCTGGCGGCGTTGGTTGTAtgtg < 1:7323944/35‑1 (MQ=255) cGGAGTCGTTCATCTGGCGGCGTTGGTTGTAtggg > 1:19761513/1‑33 (MQ=255) cGGAGTCGTTCATCTGGCGGCGTTGGTTGGAtgtg > 1:2828638/1‑35 (MQ=255) gggggcggttcttctggaggtggcggcgcatccgg < 1:2422434‑M1/35‑34 (MQ=255) ggAGTCTGTCATCTGGCGGCGTTGGTTGTATgtgt < 1:12146834/35‑1 (MQ=37) ggAGTCGTTCATCTGGCGGCGTTGGTTGTATgtgt < 1:16401907/35‑1 (MQ=255) ggAGTCGTTCATCTGGCGGCGTTGGTTGTATgtgt < 1:10208424/35‑1 (MQ=255) gAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGtt < 1:18728844/35‑1 (MQ=255) gAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGtt < 1:19085482/35‑1 (MQ=255) | GCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTT > REL606/989575‑989643 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |