New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3517490 | 69 (0.670) | 13 (0.130) | 8/48 | NT | 14.7% | coding (10/1743 nt) | ggt | gamma‑glutamyltranspeptidase periplasmic precursor |
? | REL606 | = 4266659 | 82 (0.800) | intergenic (‑355/‑38) | acs/nrfA | acetyl‑coenzyme A synthetase/nitrite reductase, formate‑dependent, cytochrome |
Only 100 of 134 total aligned reads displayed.
AGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGC > REL606/3517456‑3517524 | agagcagCAATGGCCACCCGGCGTAAAAACGTCgg > 1:3853620/1‑35 (MQ=255) gagcagCAATGGCCACCCGGCGTAAAAACGTCGGt < 1:18499785/35‑1 (MQ=255) agcagcAATGGCCACCCGGCGTAAAAACGTCGGgg > 1:18957227‑M1/1‑33 (MQ=255) agcagcAATGGCCACCCGGCGTAAAAACGTCGGgg > 1:16473555‑M1/1‑33 (MQ=255) gcagcaATGGCCACCCTGCGTAAAAACGTCggggg > 1:13492312/1‑32 (MQ=25) gcagcaATGGCCACCCGGCGTAAAAACGTCGGttt < 1:5233999/35‑1 (MQ=255) gcagcaATGGCCACCCGGCGTAAAAACGTCGGttt < 1:12089766/35‑1 (MQ=255) gcagcaATGGCCACCCGGCGTAAAAACGTCGGggt > 1:2775594‑M1/1‑32 (MQ=255) cagcaATGGCCACCCGGCGTAAAAACGTCGGtttt < 1:10643838/35‑1 (MQ=255) cagcaATGGCCACCCGGCGTAAAAACGTCGGggtt > 1:11883899‑M1/1‑31 (MQ=255) agcaATGGCCACCCGGCGTAAAAACGTCGGggttt > 1:18678355‑M1/1‑30 (MQ=255) agcaATGGCCACCCGGCGTAAAAACGTCGGgggtt > 1:2412569‑M1/1‑30 (MQ=255) agcaATGGCCACCCGGCGTAAAAACGTCGGgggtt > 1:17697441‑M1/1‑30 (MQ=255) agcaATGGCCACCCGGCGTAAAAACGTCGGgggtt > 1:11918581‑M1/1‑30 (MQ=255) agcaATGGCCACCCGGCGTAAAAACGTCGGTTTTa < 1:2823868/35‑1 (MQ=255) agcaATGGCCACCCGGCGTAAAAACGTCGGTTTTa < 1:13815453/35‑1 (MQ=255) agcaATGGCCACCCGGCGTAAAAACGTCGGTTTTa < 1:16452762/35‑1 (MQ=255) agcaATGGCCACCCGGCGTAAAAACGTCGGTTTTa < 1:11252035/35‑1 (MQ=255) agcaATGGCCACCCGGCGTAAAAACGTCGGTTTTa < 1:6503427/35‑1 (MQ=255) agcaATGGCCACCCGGCGTAAAAACGTCGGTTTTa < 1:11012039/35‑1 (MQ=255) agcaATGGCCACCCAGCGTAAAAACGTCGGTTTTa < 1:15253793/35‑1 (MQ=255) gcaATGGCCACCCGGCGTAAAAACGTCGGgggttt > 1:18674071‑M1/1‑29 (MQ=255) gcaATGGCCACCCGGCGTAAAAACGTCGGTTTTat < 1:6584726/35‑1 (MQ=255) caATGGCCACCCGGCGTAAAAACGTCGGggttttt > 1:8605776‑M1/1‑28 (MQ=255) caATGGCCACCCGGCGTAAAAACGTCGGgggtttt > 1:12190113‑M1/1‑28 (MQ=255) caATGGCCACCCGGCGTAAAAACGTCGGgggtttt > 1:15700351‑M1/1‑28 (MQ=255) caATGGCCACCCGGCGTAAAAACGTCGGTTTTatc < 1:17386667/35‑1 (MQ=255) caATGGCCACCCGGCGTAAAAACGTCGGTTTTatc < 1:20226607/35‑1 (MQ=255) caATGGCCACCCGGCGTAAAAACGTCGGTTTTatc < 1:19537635/35‑1 (MQ=255) aaTGGCCACCCGGCGTAAAAACGTCGGTTTTatca < 1:10694183/35‑1 (MQ=255) aaTGGCCACCCGGCGTAAAAACGTCGGTTTTatca < 1:4204707/35‑1 (MQ=255) aaTGGCCACCCGGCGTAAAAACGTCGGTTTTatca < 1:19484064/35‑1 (MQ=255) aTGGCCACCCGGCGTAAAAACGTCGGTTTTatcat < 1:17372872/35‑1 (MQ=255) aTGGCCACCCGGCGTAAAAACGTCGGTTTTatcat < 1:5252180/35‑1 (MQ=255) tGGCCACCCGGCGTAAAAACGTCGGgttttttatt > 1:9170726‑M1/1‑25 (MQ=255) tGGCCACCCGGCGTAAAAACGTCGGggtttttttc > 1:2285395‑M1/1‑25 (MQ=255) tGGCCACCCGGCGTAAAAACGTCGGTTTTatcatc < 1:18238574/35‑1 (MQ=255) ggCCACCCGGCGTAAAAACGTCGGTTTTATCATCg < 1:505183/35‑1 (MQ=255) ggCCACCCGGCGTAAAAACGTCGGTTTTATAATCg < 1:4608327/35‑1 (MQ=255) gCCACCCGGCGTAAAAACGTCGGTTTTATCATCGt < 1:2371977/35‑1 (MQ=255) gCCACCCGGCGTAAAAACGTCGGTTTTATCATCGt < 1:12741465/35‑1 (MQ=255) gCCACCCGGCGTAAAAACGTCGGGTTTtttatctt > 1:17145434/1‑33 (MQ=21) cgaCCCGGCGTAAAAACGTCGGTTTTATCATCGtt < 1:97499/33‑1 (MQ=255) ccccccGGCGTAAAAACGTCGGTTTTATCATCGtt < 1:2693954/32‑1 (MQ=255) ccACCCGGCGTAAAAACGTCGGggttttttttgtt > 1:17312233‑M1/1‑22 (MQ=255) ccACCCGGCGTAAAAACGTCGGggtttttatcgtt > 1:4209508‑M1/1‑22 (MQ=255) cACCCGGCGTAAAAACGTCGGggttttcattgttt > 1:14343073‑M1/1‑21 (MQ=255) cACCCGGCGTAAAAACGTCGGTTTTATCATCGTTa < 1:10677512/35‑1 (MQ=255) aCCCGGCGTAAAAACGTCGGggtttttattgtttt > 1:4880736‑M1/1‑20 (MQ=255) aCCCGGCGTAAAAACGTCGGTTTTATCATCGTTAt < 1:8873621/35‑1 (MQ=255) aCCCGGCGTAAAAACGTCGGTTTTATCATCGTTAt < 1:5393108/35‑1 (MQ=255) cccGGCGTAAAAACGTCGGTTTTATCATCGTTAtt < 1:7473409/35‑1 (MQ=255) cccGGCGTAAAAACGTCGGTTTTATCATCGTTAtt < 1:14943924/35‑1 (MQ=255) ccGGCGTAAAAACGTCGGTTTTATCATCGTTATtc < 1:10629523/35‑1 (MQ=255) ccGGCGTAAAAACGTCGGTTTTATCATCGTTATtc < 1:12746534/35‑1 (MQ=255) ccGGCGTAAAAACGTCGGTTTTATCATCGTTATtc < 1:3464271/35‑1 (MQ=255) ccGGCGTAAAAACGTCGGTTTTATCATCGTTATtc < 1:17883726/35‑1 (MQ=255) ccGGCGTAAAAACGTCGGTTTTATCATCGTTATtc < 1:16171584/35‑1 (MQ=255) cGGCGTAAAAACGTCGGTTTTATCATCGTTATtct < 1:15808219/35‑1 (MQ=255) cGGCGTAAAAACGTCGGTTTTATCATCGTTATtct < 1:14670238/35‑1 (MQ=255) cGGCGTAAAAACGTCGGTTTTATCATCGTTATtct < 1:4946875/35‑1 (MQ=255) ggCGTAAAAACGTCGGTTTTATCATCGTTATtctc < 1:19881954/35‑1 (MQ=255) gCGTAAAAACGTCGGTTTTATCATCGTTATTCTcc < 1:7746843/35‑1 (MQ=255) gCGTAAAAACGTCGGTTTTATCATCGTTATTCTcc < 1:3065431/35‑1 (MQ=255) gCGTAAAAACGTCGGTTTTATCATCGTTATTCTcc < 1:6038832/35‑1 (MQ=255) gTAAAAACGTCGGTTTTATCATAGTTATTCTCCag < 1:9495604/35‑1 (MQ=255) gTAAAAACGTAGGTTTTATCATCGTTATTCTCCag < 1:6069588/35‑1 (MQ=255) tAAAAACGTCGGTTTTATCATCGTTATTCTCCaga < 1:17455454/35‑1 (MQ=255) tAAAAACGTCGGTTTTATCATCGTTATTCTCCaga < 1:6902424/35‑1 (MQ=255) tAAAAACGTCGGTTTTATCATCGTTATTCTCCaga < 1:11678794/35‑1 (MQ=255) tAAAAACGTCGGTTTTATCATCGTTATTCTCCaga < 1:15234761/35‑1 (MQ=255) aaaaaCGTCGGTTTTATCATCGTTATTCTCCagag < 1:8931565/35‑1 (MQ=255) aaaaaCGTCGGTTTTATCATCGTTATTCTCCagag < 1:1926994/35‑1 (MQ=255) aaaaCGTCGGTTTTATCATCGTTATTCTCCAgaga < 1:4688512/35‑1 (MQ=255) aaaCGTCGGTTTTATCATCGTTATTCTCCAGAGAt < 1:10555837/35‑1 (MQ=255) aaaCGTCGGTTTTATCATCGTTATTCTCCAGAGAt < 1:16064477/35‑1 (MQ=255) aaCGTCGGTTTTATCATCGTTATTCTCCAGAGAtt < 1:17995210/35‑1 (MQ=255) aaCGTCGGTTTTATCATCGTTATTCTCCAGAGAtt < 1:14902338/35‑1 (MQ=255) aaCGTAGGTTTTATCATCGTTATTCTCCAGAGAtt < 1:4616969/35‑1 (MQ=255) aCGTCGGTTTTATCATCGTTATTCTACAGAGATTa < 1:1645159/35‑1 (MQ=255) cGTCGGTTTTATCATCGTTATTCTCCAGAGATTaa < 1:10011193/35‑1 (MQ=255) cGTCGGTTTTATCATCGTTATTCTCCAGAGATTaa < 1:9441595/35‑1 (MQ=255) tCGGTTTTATCATCGTTATTCTCCAGAGATTAAgg < 1:434334/35‑1 (MQ=255) tCGGTTTTATCATCGTTATTCTCCAGAGATTAAgg < 1:16089153/35‑1 (MQ=255) cGGTTTTATCATCGTTATTCTCCAGAGATTAAggg > 1:12623032/1‑35 (MQ=255) cGGTTTTATCATCGTTATTCTCCAGAGATTAAggg < 1:8121630/35‑1 (MQ=255) cGGTTTTATCATCGTTATTCTCCAGAGATTAAggg > 1:6941095/1‑35 (MQ=255) cGGTTTTATCATCGTTATTCTCCAGAGATTAAggg < 1:6026968/35‑1 (MQ=255) ggTTTTATCATCGTTATTCTCTAGAGATTAAgggg > 1:1366029/1‑35 (MQ=255) ggTTTTATCATCGTTATTCTCCAGAGATTAAggtg > 1:15024331/1‑33 (MQ=255) ggTTTTATCATCGTTATTCTCCAGAGATTAAgggg > 1:11722170/1‑35 (MQ=255) ggTTTTATCATCGTTATTCTCCAGAGATTAAgggg > 1:6548521/1‑35 (MQ=255) gTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc < 1:18048386/35‑1 (MQ=255) gTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc > 1:6785981/1‑35 (MQ=255) gTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc > 1:15011796/1‑35 (MQ=255) gTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc > 1:8507166/1‑35 (MQ=255) gTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc > 1:17254323/1‑35 (MQ=255) gTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc > 1:16267863/1‑35 (MQ=255) gTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc > 1:16268607/1‑35 (MQ=255) gTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc > 1:1106766/1‑35 (MQ=255) | AGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGC > REL606/3517456‑3517524 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |