New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1004939 = | 65 (0.630) | 15 (0.180) | 5/40 | NT | 19.2% | coding (1138/1401 nt) | asnS | asparaginyl‑tRNA synthetase |
? | REL606 | 1339539 = | 72 (0.840) | coding (610/1170 nt) | yciM | hypothetical protein |
Only 100 of 139 total aligned reads displayed.
ATGATCTCACCGATGCCCGGAGCCAGAACGTCCATAGCCGCAACGGTTTTACCGTCTTCGTTAAGGCGC > REL606/1004905‑1004973 | gggcgctgtttttatctgccgccgccccttttttt > 1:4638167‑M1/35‑35 (MQ=255) gggcgctgtttttatctgccgccgccccttttttt < 1:2656777‑M1/1‑1 (MQ=255) gggcgctgtttttatctgccgccgccccttttttt < 1:13470382‑M1/1‑1 (MQ=255) gggcgctgtttttatctgccgccgccccttttttt > 1:1569094‑M1/35‑35 (MQ=255) aTGATCTCACCGATGCCCGGAGCCAGAACGTCCAt > 1:8604723/1‑35 (MQ=255) aTGATCTCACCGATGCCCGGAGCCAGAACGTCCAt > 1:15983565/1‑35 (MQ=255) gcgctgtttttatctgccgccgccccttttttTAg < 1:16897670‑M1/3‑1 (MQ=255) gcgctgtttttatctgccgccgccccttttttTAg > 1:8407172‑M1/33‑35 (MQ=255) gcgctgtttttatctgccgccgccccttttttTAg > 1:17417505‑M1/33‑35 (MQ=255) gATCTCACCGATGCCCGGAGCCAGAACGTCCATAg > 1:9041067/1‑35 (MQ=255) cgctgtttttatctgccgccgccccttttttTAGc > 1:8891801‑M1/32‑35 (MQ=255) cgctgtttttatctgccgccgccccttttttTAGc < 1:6359075‑M1/4‑1 (MQ=255) cgctgtttttatctgccgccgccccttttttTAGc > 1:20230753‑M1/32‑35 (MQ=255) aTCTCACCGATGCCCGGAGCCAGAACGTCCATAGc > 1:11791740/1‑35 (MQ=255) aTCTCACCGATGCCCGGAGCCAGAACGTCCATAGc > 1:3607828/1‑35 (MQ=255) tctcACCGATGCCCGGAGCCAGAACGTCCATAGcc > 1:11574680/1‑35 (MQ=255) tctcACCGATGCCCGGAGCCAGAACGTCCATAGcc > 1:12562502/1‑35 (MQ=255) aCCGATGCCCGGAGCCAGAACGTCCATAGCCGCaa > 1:19235775/1‑35 (MQ=255) ccGATGCCCGGAGCCAGAACGTCCATAGCCGCAAc > 1:11838205/1‑35 (MQ=255) cGATGCCCGGAGCCAGAACGTCCATAGCCGCAACg > 1:359859/1‑35 (MQ=255) cGATGCCCGGAGCCAGAACGTCCATAGCCGCAACg > 1:12125648/1‑35 (MQ=255) cGATGCCCGGAGCCAGAACGTCCATAGCCGCAACg > 1:18182616/1‑35 (MQ=255) gATGCCCGGAGCCAGAACGTCCATAGCCGCAACgg > 1:7529608/1‑35 (MQ=255) gATGCCCGGAGCCAGAACGTCCATAGCCGCAACgg > 1:18036973/1‑35 (MQ=255) gATGCCCGGAGCCAGAACGTCCATAGCCGCAACgg > 1:6758501/1‑35 (MQ=255) gATGCCCGGAGCCAGAACGTCCATAGCCGCAACgg > 1:5393696/1‑35 (MQ=255) gATGCCCGGAGCCAGAACGTCCATAGCCGCAACgg > 1:13908832/1‑35 (MQ=255) gCCCGGAGCCAGAACGTCCATAGCCGCAACGGttt > 1:7567281/1‑35 (MQ=255) gCCCGGAGCCAGAACGTCCATAGCCGCAACGGttt > 1:8245190/1‑35 (MQ=255) gCCCGGAGCCAGAACGTCCATAGCCGCAACGGttt > 1:13995042/1‑35 (MQ=255) ccccGGACCCACCCCGTCCATAGCAGCAACGGttt < 1:2463190/34‑1 (MQ=12) cccGGAGCCAGAACGTCCATAGCCGCAACGGtttt > 1:20184798/1‑35 (MQ=255) cccGGAGCCAGAACGTCCATAGCCGCAACGGtttt > 1:20195510/1‑35 (MQ=255) cccGGAGCCAGAACGTCCATAGCCGCAACGGtttt > 1:16333041/1‑35 (MQ=255) cccGGAGCCAGAACGTCCATAGCCGCAACGGtttt > 1:11509252/1‑35 (MQ=255) ccGGAGCCAGAACGTCCATAGCCGCAACGGTTTTa > 1:2632542/1‑35 (MQ=255) ccGGAGCCAGAACGTCCATAGCCGCAACGGGTTTa > 1:8580026/1‑35 (MQ=255) cGGAGCCAGAACGTCCATATCCGCAACGGTTTTAc > 1:2406243/1‑35 (MQ=255) ggAGCCAGAACGTCCATAGCCGCAACGGTTTTAcc > 1:14920341/1‑35 (MQ=255) gAGCCAGAACGTCCATAGCCTCAACGGTTTTACCg > 1:19148621/1‑35 (MQ=255) gAGCCAGAACGTCCATAGCCGCAACGGTTTTACCg > 1:5300333/1‑35 (MQ=255) gAGCCAGAACGTCCATAGCCGCAACGGTTTTACCg > 1:15197873/1‑35 (MQ=255) aGCCAGAACGTCCATAGCCGCAACGGTTTTACCGt > 1:5262039/1‑35 (MQ=255) aGCCAGAACGTCCATAGCCGCAACGGTTTTACCGt > 1:11800188/1‑35 (MQ=255) aGCCAGAACGTCCATAGCCGCAACGGTTTTACCGt > 1:4946048/1‑35 (MQ=255) gCCAGAACGTCCATAGCCGCAACGGTTTTACCGTc > 1:5883186/1‑35 (MQ=255) gCCAGAACGTCCATAGCCGCAACGGTTTTACCGTc > 1:1400572/1‑35 (MQ=255) cccccccttttttTAGCCGCAACGGTTTTACCGTc > 1:3366226‑M1/14‑35 (MQ=255) cccccccttttttTAGCCGCAACGGTTTTACCGTc > 1:7033477‑M1/14‑35 (MQ=255) ccAGAACGTCCATAGCCGCAACGGTTTTACCGTCt > 1:4737478/1‑35 (MQ=255) ccAGAACGTCCATAGCCGCAACGGTTTTACCGTCt > 1:13154366/1‑35 (MQ=255) ccAGAACGTCCATAGCCGCAACGGTTTTACCGTCt > 1:1523372/1‑35 (MQ=255) cccccctttttTAGCCGCAACGGTTTTACCGTCtt > 1:8138933‑M1/12‑35 (MQ=255) cAGAACGTCCATAGCCGCAACGGTTTTACCGTCtt > 1:6277119/1‑35 (MQ=255) cAGAACGTCCATAGCCGCAACGGTTTTACCGTCtt > 1:11274962/1‑35 (MQ=255) cAGAACGTCCATAGCCGCAACGGTTTTACCGTCtt > 1:15651942/1‑35 (MQ=255) cAGAACGTCCATAGCCGCAACGGTTTTACCGTCtt > 1:15845864/1‑35 (MQ=255) cAGAACGTCCATAGCCGCAACGGTTTTACCGTCtt > 1:18088961/1‑35 (MQ=255) accccttttttTAGCCGCAACGGTTTTACCGTCtt > 1:18316337‑M1/12‑35 (MQ=255) ccccttttttTAGCCGCAACGGTTTTACCGTCTTc > 1:18545788‑M1/11‑35 (MQ=255) aGAACGTCCATAGCCGCAACGGTTTTACCGTCTTc > 1:20064881/1‑35 (MQ=255) aGAACGTCCATAGCCGCAACGGTTTTACCGTCTTc > 1:4227152/1‑35 (MQ=255) gAACGTCCATAGCCGCAACGGTTTTACCGTCTTCg > 1:137527/1‑35 (MQ=255) gAACGTCCATAGCCGCAACGGTTTTACCGTCTTCg > 1:18314247/1‑35 (MQ=255) cccttttttTAGCCGCAACGGTTTTACCGTCTTCg > 1:7652799‑M1/10‑35 (MQ=255) cccctttttTAGCCGCAACGGTTTTACCGTCTTCg > 1:2974395‑M1/10‑35 (MQ=255) aaCGTCCATAGCCGCAACGGTTTTACCGTCTTCGt > 1:17325057/1‑35 (MQ=255) aaCGTCCATAGCCGCAACGGTTTTACCGTCTTCGt > 1:13288136/1‑35 (MQ=255) aaCGTCCATAGCCGCAACGGTTTTACCGTCTTCGt > 1:13035794/1‑35 (MQ=255) cctttttTAGCCGCAACGGTTTTACCGTCTTCGtt > 1:13030755‑M1/8‑35 (MQ=255) cctttttTAGCCGCAACGGTTTTACCGTCTTCGtt > 1:10963992‑M1/8‑35 (MQ=255) aCGTCCATAGCCGCAACGGTTTTACCGTCTTCGtt > 1:7717854/1‑35 (MQ=255) aCGTCCATAGCCGCAACGGTTTTACCGTCTTCGtt > 1:8199681/1‑35 (MQ=255) ttttttTAGCCGCAACGGTTTTACCGTCTTCGTTa > 1:19717281‑M1/7‑35 (MQ=255) ttttttTAGCCGCAACGGTTTTACCGTCTTCGTTa > 1:18681435‑M1/7‑35 (MQ=255) ttttttTAGCCGCAACGGTTTTACCGTCTTCGTTa > 1:16008294‑M1/7‑35 (MQ=255) tttttTAGCCGCAACGGTTTTACCGTCTTCGTTaa > 1:910705‑M1/6‑35 (MQ=255) ttcttTAGCCGCAACGGTTTTACCGTCTTCGTTaa > 1:1589813‑M1/6‑35 (MQ=255) gTCCATAGCCGCAACGGTTTTACCGTCTTCGTTaa > 1:6848831/1‑35 (MQ=255) gTCCATAGCCGCAACGGTTTTACCGTCTTCGTTaa > 1:7370155/1‑35 (MQ=255) gTCCATAGCCGCAACGGTTTTACCGTCTTCGTTaa > 1:17087726/1‑35 (MQ=255) ttttTAGCCGCAACGGTTTTACCGTCTTCGTTAAg > 1:1198533‑M1/5‑35 (MQ=255) ttttTAGCCGCAACGGTTTTACCGTCTTCGTTAAg > 1:2672908‑M1/5‑35 (MQ=255) ttttTAGCCGCAACGGTTTTACCGTCTTAGTTAAg > 1:11365122‑M1/5‑35 (MQ=255) tttTAGCCGCAACGGTTTTACCGTCTTCGTTAAgg > 1:6918697‑M1/4‑35 (MQ=255) tttTAGCCGCAACGGTTTTACCGTCTTCGTTAAgg > 1:12795527‑M1/4‑35 (MQ=255) tttTAGCCGCAACGGTTTTACCGTATTCGTTAAgg > 1:11400412‑M1/4‑35 (MQ=255) ccATAGCCGCAACGGTTTTACCGTCTTCGTTAAgg > 1:16582207/1‑35 (MQ=255) ttTAGCCGCAACGGTTTTACCGTCTTCGTTAAGgc > 1:8093975‑M1/3‑35 (MQ=255) ttTAGCCGCAACGGTTTTACCGTCTTCGTTAAGgc > 1:4295859‑M1/3‑35 (MQ=255) ttTAGCCGCAACGGTTTTACCGTCTTCGTTAAGgc > 1:5476019‑M1/3‑35 (MQ=255) ttTAGCCGCAACGGTTTTACAGTCTTCGTTAAGgc > 1:8482125‑M1/3‑35 (MQ=255) cATAGCCGCAACGGTTTTACCGTCTTCGTTAAGgc > 1:1765881/1‑35 (MQ=255) cATAGCCGCAACGGTTTTACCGTCTTCGTTAAGgc > 1:13932114/1‑35 (MQ=255) tTAGCCGCAACGGTTTTACCGTCTTCGTTAAGgcg > 1:18870936‑M1/2‑35 (MQ=255) tTAGCCGCAACGGTTTTACCGTCTTCGTTAAGgcg > 1:12651748‑M1/2‑35 (MQ=255) tTAGCCGCAACGGTTTTACCGTCTTCGTTAAGgcg > 1:10920229‑M1/2‑35 (MQ=255) aTAGCCGCAACGGTTTTACCGTCTTTGTTAAGgcg > 1:10558115/1‑35 (MQ=255) TAGCCGCAACGGTTTTACCGTCTTCGTTAAGgcgc > 1:7646794‑M1/1‑35 (MQ=255) TAGCCGCAACGGTTTTACCGTCTTCGTTAAGgcgc > 1:3330763‑M1/1‑35 (MQ=255) | ATGATCTCACCGATGCCCGGAGCCAGAACGTCCATAGCCGCAACGGTTTTACCGTCTTCGTTAAGGCGC > REL606/1004905‑1004973 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |