New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2530544 | 66 (0.640) | 11 (0.120) | 5/42 | NT | 18.2% | coding (1232/1668 nt) | hyfG | hydrogenase 4, subunit |
? | REL606 | 3367495 = | 41 (0.460) | intergenic (‑81/+26) | yhdN/rplQ | hypothetical protein/50S ribosomal protein L17 |
Only 100 of 151 total aligned reads displayed.
GTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGC > REL606/3367461‑3367529 | ggaacttctgccggcgtaatcacaaactggccggg > 1:15709084‑M2/34‑35 (MQ=255) ctgaatgggtgtggactaagtgtgatagctgcggg > 1:15307373‑M2/35‑35 (MQ=255) atattccaaaaacactgtttacctttaccggcggg > 1:18236943‑M2/35‑35 (MQ=255) atattccaaaaacactgtttacctttaccggcggg > 1:3097882‑M2/35‑35 (MQ=255) tattccaaaaacactgtttacctttaccggcgggg > 1:18970392‑M2/34‑35 (MQ=255) tattccaaaaacactgtttacctttaccggcgggg > 1:19648369‑M2/34‑35 (MQ=255) tattccaaaaacactgtttacctttaccggcgggg > 1:2600791‑M2/34‑35 (MQ=255) tattccaaaaacactgtttacctttaccggcgggg > 1:4440412‑M2/34‑35 (MQ=255) tattccaaaaacactgtttacctttaccggcgggg > 1:38785‑M2/34‑35 (MQ=255) gaacttctgccggcgtaatcacaaactggccgggg > 1:10954597‑M2/33‑35 (MQ=255) gaacttctgccggcgtaatcacaaactggccgggg > 1:6814676‑M2/33‑35 (MQ=255) attccaaaaacactgtttacctttaccggcggggg > 1:17670330‑M2/33‑34 (MQ=255) aacttctgccggcgtaatcacaaactggccggggg > 1:2002588‑M2/32‑34 (MQ=255) aacttctgccggcgtaatcacaaactggccggggg > 1:18597655‑M2/32‑34 (MQ=255) ttccaaaaacactgtttacctttaccggcgggggg > 1:15732245‑M2/32‑33 (MQ=255) gggATACTACGGGTATAAAAAAACCCGCCGGGGCg < 1:3161170/35‑1 (MQ=255) gggATACTACGGGTAAAAAAAAACCCGCCgggggg > 1:898313/1‑33 (MQ=37) acttctgccggcgtaatcacaaactggccgggggg > 1:9933351‑M2/31‑33 (MQ=255) acttctgccggcgtaatcacaaactggccgggggg > 1:4569320‑M2/31‑33 (MQ=255) acttctgccggcgtaatcacaaactggccgggggg > 1:14009682‑M2/31‑33 (MQ=255) acttctgccggcgtaatcacaaactggccgggggg > 1:6705003‑M2/31‑33 (MQ=255) acttctgccggcgtaatcacaaactggccgggggg > 1:8065194‑M2/31‑33 (MQ=255) aaggggtgtggactaagtgtgatagctgcgggcgg > 1:1341177‑M2/32‑32 (MQ=255) aaggggtgtggactaagtgtgatagctgcgggccg > 1:1774825‑M2/32‑35 (MQ=255) tccaaaaacactgtttacctttaccggcggggggg > 1:18331714‑M2/31‑35 (MQ=255) tccaaaaacactgtttacctttaccggcggggggg > 1:16011278‑M2/31‑35 (MQ=255) cttctgccggcgtaatcacaaactggccgGGGGgg > 1:16182297‑M2/30‑35 (MQ=255) cttctgccggcgtaatcacaaactggccgGGGGgg > 1:7907057‑M2/30‑35 (MQ=255) ttctgccggcgtaatcacaaactggccgGGGGggg > 1:13294908‑M2/29‑35 (MQ=255) ggggtgtggactaagtgtgatagctgcgggggggg > 1:4769571‑M2/30‑35 (MQ=255) gATACTACGGGTATAAAAAAACCCCCCCGGGGggg > 1:211683/1‑35 (MQ=25) tctgccggcgtaatcacaaactggccgGGGGGGGt > 1:6313059‑M2/28‑35 (MQ=255) tctgccggcgtaatcacaaactggccgGGGGGGGt > 1:2988450‑M2/28‑35 (MQ=255) tctgccggcgtaatcacaaactggccgGGGGGGGt > 1:7540865‑M2/28‑35 (MQ=255) caaaaacactgtttacctttaccggcggggggggg > 1:2637853‑M2/29‑34 (MQ=255) aTACTACGGGTATAAAAAAACCCGCCGGGGCgggg > 1:9046209/1‑34 (MQ=255) tactacGGGTATAAAAAAACCCGCCGGGGCGGGtt < 1:5005597/35‑1 (MQ=255) tactacGGGTATAAAAAAACCCGCCGGGGCGGGtt < 1:19177530/35‑1 (MQ=255) ggtgtggactaagtgtgatagctgcggGGAGGGtt > 1:7158767‑M2/28‑35 (MQ=255) ctgccggcgtaatcacaaactggccgGGGGGGgtg > 1:6650613‑M2/27‑34 (MQ=255) gtgtggactaagtgtgatagctgcggGGGGGGttt > 1:6111191‑M2/27‑35 (MQ=255) gtgtggactaagtgtgatagctgcggGGGGGGttt > 1:16525521‑M2/27‑35 (MQ=255) gtgtggactaagtgtgatagctgcggGGAGGGttt > 1:16043175‑M2/27‑35 (MQ=255) actacGGGTATAAAAAAACCCGCCGGGGCGGGgtt > 1:15441159/1‑35 (MQ=255) aaaacactgtttacctttaccggcggGGGGGGttt > 1:18643198‑M2/27‑35 (MQ=255) aaaacactgtttacctttaccggcggGGGGGGttt > 1:1231938‑M2/27‑35 (MQ=255) tgtggactaagtgtgatagctgcggGGCGGGtttt > 1:1390425‑M2/26‑35 (MQ=255) tgtggactaagtgtgatagctgcggGGAGGGtttt > 1:12183143‑M2/26‑35 (MQ=255) aaacactgtttacctttaccggcggGGGGGGtttt > 1:5469835‑M2/26‑35 (MQ=255) tacGGGTATAAAAAAACGCGCCGGGGCGGGttttt < 1:11781420/35‑1 (MQ=255) tacGGGTATAAAAAAACCCGCCGGGGCGGGttttt < 1:13378554/35‑1 (MQ=255) gtggactaagtgtgatagctgcggGGTGGGttttt > 1:15294299‑M2/25‑35 (MQ=255) tggactaagtgtgatagctgcggGGTGGgttttta > 1:19179028‑M2/24‑34 (MQ=255) acactgtttacctttaccggcggGGGGGGtttttt > 1:9087393‑M2/24‑35 (MQ=255) acGGGTATAAAAAAACCCGCCGGGGGGGGgttttt > 1:6358161/1‑35 (MQ=25) acGGGTATAAAAAAACCCGCCGGGGCGGGtttttt < 1:7374621/35‑1 (MQ=255) acGGGTATAAAAAAACCCGCCGGGGCGGGgttttt > 1:17022269/1‑35 (MQ=255) cactgtttacctttaccggcggGGGGGgttttttc > 1:15435451‑M2/23‑34 (MQ=255) cGGGTATAAAAAAACCCGCCGGGGCGGGgtttttt > 1:10651758/1‑35 (MQ=255) cGGGTATAAAAAAACCCGCCGGGGCGGGgtttttt > 1:314636/1‑35 (MQ=255) actgtttacctttaccggcggGGGGGgtttttttc > 1:4099871‑M2/22‑34 (MQ=255) ggTATAAAAAAACCCGCCGGGGCGGGTTTTTTTAc > 1:18675907/1‑35 (MQ=255) ggTATAAAAAAACCCGCCGGGGCGGGTTTTTTTAc > 1:8628171/1‑35 (MQ=255) gTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACg < 1:5572708/35‑1 (MQ=255) tataAAAAAACCCGCCGGGGCGGGTTTTTTTACGt < 1:3833687/35‑1 (MQ=255) ataAAAAACCCCGCCGGGGCGGGTTTTTTTACGtt < 1:3358393/35‑1 (MQ=255) ataAAAAAACCCGCCGGGGCGGGTTTTTTTACGtt > 1:8937023/1‑35 (MQ=255) ataAAAAAACCCGCCGGGGCGGGTTTTTTTACGtt < 1:8734640/35‑1 (MQ=255) ataAAAAAACCCGCCGGGGCGGGTTTTATTACGtt < 1:4889178/35‑1 (MQ=255) taAAAAACCCCGCCGGGGCGGGTTTTTTTACGTTg < 1:11194588/35‑1 (MQ=255) taAAAAAACCCGCCGGGGCGGGGTTTTTTACGTTg > 1:732152/1‑35 (MQ=255) aaaaaatCCCGCCGGGGCGGGTTTTTTTACGTTGc < 1:17122352/35‑1 (MQ=255) aaaaaaCCCGCCGGGGCGGGTTTTTTTACGTTGCt > 1:12516316/1‑35 (MQ=255) aaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCa < 1:17323377/35‑1 (MQ=255) aaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAg < 1:3659019/35‑1 (MQ=255) aCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGa < 1:636426/35‑1 (MQ=255) aCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGa > 1:17371052/1‑35 (MQ=255) cccGCCGGGGCGGGTTTTTTTACGTTGCTTCAGAt > 1:232632/1‑35 (MQ=255) cccGCCGGGGCGGGTTTTTTTACGTTGCTTCAGAt > 1:10318620/1‑35 (MQ=255) cccGCCGGGGCGGGTTTTTTTACGTTGCTTCAGAt < 1:17587176/35‑1 (MQ=255) cgccgGGGCGGGTTTTTTTACGTTGCTTCAGATTa < 1:5443100/35‑1 (MQ=255) cgccgGGGCGGGTTTTTTTACGTTGCTTCAGATTa > 1:4327956/1‑35 (MQ=255) gccgGGGCGGGTTTTTTTACGTTGCTTCAGATTAc < 1:6218336‑M2/31‑1 (MQ=255) gccgGGGCGGGTTTTTTTACGTTGCTTCAGATTAc < 1:19595732‑M2/31‑1 (MQ=255) ccgGGGCGGGTTTTTTTACGTTGCTTCAGATTAct > 1:19636477‑M2/4‑35 (MQ=255) ccgGGGCGGGTTTTTTTACGTTGCTTCAGATTAct < 1:20176470‑M2/32‑1 (MQ=255) ccgGGGCGGGTTTTTTTACGTTGCTTCAGATTAct < 1:13568273‑M2/32‑1 (MQ=255) ccgGGGCGGGTTTTTTTACGTTGCTTCAGATTAct > 1:4052160‑M2/4‑35 (MQ=255) cgGGGCGGGTTTTTTTACGTTGCTTCAGATTActc < 1:10098887‑M2/33‑1 (MQ=255) cgGGGCGGGGTTTTTTACGTTGCTTCAGATTActc > 1:7259565‑M2/3‑35 (MQ=255) cgGGGCGGGGTTTTTTACGTTGCTTCAGATTActc > 1:5606228‑M2/3‑35 (MQ=255) gGGGCGGGTTTTTTTACGTTGCTTCAGATTActct > 1:10278170‑M2/2‑35 (MQ=255) gGGGCGGGTTTTTTTACGTTGCTTCAGATTActct < 1:17595087‑M2/34‑1 (MQ=255) gGGGCGGGGTTTTTTACGTTGCTTCAGATTActct > 1:2447313‑M2/2‑35 (MQ=255) gGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTg > 1:6860370‑M2/2‑35 (MQ=255) gGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTg < 1:11691360‑M2/34‑1 (MQ=255) gGGCGGGTTTTTTTACGTTGATTCAGATTACTCTg < 1:769407‑M2/34‑1 (MQ=255) ggCGGGTTTTTTTACGTTGCTTCAGATTACTCTgc > 1:19687303/1‑35 (MQ=255) ggCGGGTTTTTTTACGTTGCTTCAGATTACTCTgc < 1:6094458/35‑1 (MQ=255) ggCGGGTTTTTTTAAGTTGCTTCAGATTACTCTgc < 1:12296552/35‑1 (MQ=255) | GTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGC > REL606/3367461‑3367529 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |