New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2175017 | 45 (0.440) | 18 (0.200) | 5/42 | NT | 24.6% | coding (1595/1716 nt) | dld | D‑lactate dehydrogenase, FAD‑binding, NADH independent |
? | REL606 | = 4351424 | 71 (0.790) | intergenic (+32/‑106) | groEL/yjeI | chaperonin GroEL/hypothetical protein |
Only 100 of 154 total aligned reads displayed.
TAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGT > REL606/4351390‑4351458 | tAATTGCCCTGCACCACGCAGAAATAAACAAAccc < 1:3719606/35‑1 (MQ=255) aaTTGCCCTGCACCTCGTAGAAATAAACAAACCCc > 1:15312742‑M2/1‑34 (MQ=255) aaTTGCCCTGCACCTCGCAGAAATAAACAAACCCc < 1:19018367‑M2/35‑2 (MQ=255) aaTTGCCCTGCACCTCGCAGAAATAAACAAACCCc > 1:18727524‑M2/1‑34 (MQ=255) aaTTGCCCTGCACCTCGCAGAAATAAACAAACCCc < 1:5249767‑M2/35‑2 (MQ=255) aTTGCCCTGCACCTCGCAGAAATAAACAAACCCcc > 1:14144553‑M2/1‑33 (MQ=255) ttGCCCTGCACCTCGCAGAAATAAACAAACCCccg < 1:19610090‑M2/35‑4 (MQ=255) tGCCCTGCACCTCGCAGAAGTAAACAAACCCCCgg < 1:19552273/35‑1 (MQ=255) tGCCCTGCACCTCGCAGAAATAAACAAACCCCCgg < 1:2109475/35‑1 (MQ=255) tGCCCTGCACCTCGCAGAAATAAACAAACCCCCgg < 1:19853680/35‑1 (MQ=255) tGCCCTGCACCTCGCAGAAATAAACAAACCCCCgg < 1:17612617/35‑1 (MQ=255) tGCCCTGCACCTCGCAGAAATAAACAAACCCCCgg < 1:15847530/35‑1 (MQ=255) tGCCCTGCACCTCGCAGAAATAAACAAACCCCCgg < 1:7471612/35‑1 (MQ=255) gCCCTGCACCTCGCAGAAATAAACAAACCCCCggg < 1:11260750/35‑1 (MQ=255) gCCCTGCACCTCGCAGAAATAAACAAACCCCCggg < 1:11673515/35‑1 (MQ=255) gCCCTGCACCTCGCAGAAATAAACAAACCCCCggg > 1:1911742/1‑35 (MQ=255) gCCCTGCACCTCGCAGAAATAAACAAACCCCCggg < 1:5490656/35‑1 (MQ=255) cccTGCACCTCGCAGAAATAAACAAACCCCCGGGc > 1:3861618/1‑35 (MQ=255) cccTGCACCTCGCAGAAATAAACAAACCCCCGGGc < 1:9175767/35‑1 (MQ=255) cccTGCACCTCGCAGAAATAAACAAACCCCCGGGc > 1:5355189/1‑35 (MQ=255) ccTGCACCTCGCAGAAATAAACAAACCCCCGGGCa > 1:8022038/1‑35 (MQ=255) cTGCACCTCGCAGAAATAAACAAACCCCCTGGCAg > 1:18043322/1‑35 (MQ=255) cTGCACCTCGCAGAAATAAACAAACCCCCTGGCAg > 1:19927132/1‑35 (MQ=255) cTGCACCTCGCAGAAATAAACAAACCCCCGTGCAg > 1:3499490/1‑35 (MQ=255) cTGCACCTCGCAGAAATAAACAAACCCCCGGGCAg < 1:20066046/35‑1 (MQ=255) tGCACCTCGCAGAAATAAACAAACCCCCGGGCAGa > 1:4358324/1‑35 (MQ=255) tGCACCTCGCAGAAATAAACAAAACCCCGGGCAGa < 1:5965502/35‑1 (MQ=255) tcACCTCGCAGAAATAAACAAACCCCCGGGCAGaa < 1:13804499/34‑1 (MQ=255) gCACCTCGCAGAAATAAACAAACCCCCGGGCAGaa < 1:17251317/35‑1 (MQ=255) gCACCTCGCAGAAATAAACAAACCCCCGGGCAGaa > 1:9411459/1‑35 (MQ=255) gCACCTCGCAGAAATAAACAAACCCCCGGGCAGaa > 1:1933724/1‑35 (MQ=255) cACCTCGCAGAAATAAACAAACCCCCGGGCAGaaa < 1:9631241/35‑1 (MQ=255) cACCTCGCAGAAATAAACAAACCCCCGGGCAGaaa < 1:11413303/35‑1 (MQ=255) cACCTCGCAGAAATAAACAAACCCCCGGGCAGaaa < 1:8112855/35‑1 (MQ=255) aCCTCGCAGAAATAAACAAACCCCCGGGCAGAAAt < 1:9085021/35‑1 (MQ=255) ccTCGCAGAAATAAACAAACCCCCGGGCAGAAATg > 1:11366836/1‑35 (MQ=255) ccTCGCAGAAATAAACAAACCCCCGGGCAGAAATg < 1:18563053/35‑1 (MQ=255) ccTCGCAGAAATAAACAAACCCCCGGGCAGAAATg < 1:7305544/35‑1 (MQ=255) cTCGCAGAAATAAACAAACCCCCGGGCAGAAATGt > 1:17434150/1‑35 (MQ=255) cTCGCAGAAATAAACAAACCCCCGGGCAGAAATGt < 1:17465321/35‑1 (MQ=255) tCGCAGAAATAAACAAACCCCCGGGCAGAAATGTc > 1:1046404/1‑35 (MQ=255) tCGCAGAAATAAACAAACCCCCGGGCAGAAATGTc < 1:11265938/35‑1 (MQ=255) cGCAGAAATAAACAAACCCCCGGGCAGAAATGTCt < 1:12216057/35‑1 (MQ=255) gCAGAAATAAACAAACCCCCGGGCAGAAATGTCTg > 1:161134/1‑35 (MQ=255) gCAGAAATAAACAAACCCCCGGGCAGAAATGTCTg < 1:4194053/35‑1 (MQ=255) gCAGAAATAAACAAACCCCCGGGCAGAAATGTCTg > 1:1393928/1‑35 (MQ=255) gCAGAAATAAACAAACCCCCGGGCAGAAATGTCTg < 1:13879927/35‑1 (MQ=255) gCAGAAATAAACAAACCCCCGGGCAGAAATGTCTg < 1:5750399/35‑1 (MQ=255) gCAGAAATAAACAAACCCCCGGGCAGAAATGTCTg < 1:20464496/35‑1 (MQ=255) cAGAAATAAACAAACCCCCGGGCAGAAATGTCTgg > 1:10146897/1‑35 (MQ=255) cAGAAATAAACAAACCCCCGGGCAGAAATGTCTgg < 1:5255068/35‑1 (MQ=255) cAGAAATAAACAAACCCCCGGGCAGAAATGTCTgg < 1:350515/35‑1 (MQ=255) aGAAATAAACAAACCCCCGGGCAGAAATGTCTggg < 1:4100302/35‑1 (MQ=255) gAAATAAACAAACCCCCGGGCAGAAATGTCTgggg < 1:3012224/35‑1 (MQ=255) gAAATAAACAAACCCCCGGGCAGAAATGTCTgggg > 1:7059177/1‑35 (MQ=255) gAAATAAACAAACCCCCGGGCAGAAATGTCTgggg > 1:17714047/1‑35 (MQ=255) gAAATAAACAAACCCCCGGGCAGAAATGTCTgggg > 1:9538502/1‑35 (MQ=255) aaaTAAACAAACCCCCGGGCAGAAATGTCTggggg < 1:8934843/35‑1 (MQ=255) aaaTAAACAAACCCCCGGGCAGAAATGTCTggggg > 1:5678040/1‑35 (MQ=255) taaaacaaacccccgacgttatgctcggcagggta > 1:9718289‑M2/3‑12 (MQ=255) tAAACAAACCCCCGGGCAGAAATGTCTGGGGGttt > 1:18586768/1‑35 (MQ=255) tAAACAAACCCCCGGGCAGAAATGTCTGGGGGttt > 1:17209390/1‑35 (MQ=255) tAAACAAACCCCCGGGCAGAAATGTCTGGGGGttt < 1:12016518/35‑1 (MQ=255) tAAAAAAACCCccgacgttatgctcggcagggtac > 1:19259092‑M2/1‑11 (MQ=255) aaacaaccCCccgacgttatgctcggcagggtact > 1:17978284‑M2/1‑10 (MQ=255) aaacaaacCCccgacgttatgctcggcagggtact > 1:6130990‑M2/1‑10 (MQ=255) aaacaaacCCccgacgttatgctaggcagggtact > 1:19566853‑M2/1‑10 (MQ=255) aaacaaacCCCCGGGCAGAAATGTCTGGGGGtttt < 1:2410642/35‑1 (MQ=255) aaacaaacCCCCGGGCAGAAATGTCTGGGGGtttt > 1:19686969/1‑35 (MQ=255) aaaaaaacCCccgacgttatgctcggcagggtact > 1:10724678‑M2/1‑10 (MQ=255) aacaaacCCCCGGGCAGAAATGTCTGGGGGttttt > 1:10320146/1‑35 (MQ=255) aacaaacCCCCGGGCAGAAATGTCTGGGGGttttt < 1:14708054/35‑1 (MQ=255) acaagcCCccgacgttatgctcggcagggtactgc > 1:13438375‑M2/1‑8 (MQ=255) acaaacCCCCGGGCAGAAATGTCTGGGGGTTTTTc > 1:12759200/1‑35 (MQ=255) aaaaacccccgacgttatgctcggcagggtactgc > 1:1784548‑M2/3‑8 (MQ=255) caaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCt < 1:12453575/35‑1 (MQ=255) caaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCt < 1:13066436/35‑1 (MQ=255) caaacCCCCGGGCAGAAATGTCTGGGGGGTTTTCt > 1:16401561/1‑35 (MQ=255) aaccCCccgacgttatgctcggcagggtactgcgc > 1:10700903‑M2/1‑6 (MQ=255) aaccCCccgacgttatgctcggcagggtactgcgc > 1:1836624‑M2/1‑6 (MQ=255) aaacCCccgacgttatgctcggcagggtactgcgc > 1:14629470‑M2/1‑6 (MQ=255) aaacCCccgacgttatgctcggcagggtactgcgc > 1:15252824‑M2/1‑6 (MQ=255) aaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCtt < 1:1420451/35‑1 (MQ=255) aaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCtt < 1:16726644/35‑1 (MQ=255) aaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCtt < 1:3103109/35‑1 (MQ=255) aaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCtt < 1:20004164/35‑1 (MQ=255) aaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCtt < 1:749950/35‑1 (MQ=255) aacCCCCGGGCAGAAATGTCTGGGGGTTTTTCttt < 1:12394121/35‑1 (MQ=255) cgccccgacgttatgctcggcagggtactgcgcgc > 1:10060314‑M2/3‑4 (MQ=255) acCCCCGGGCAGAAATGTCTGGGGGTTTTTCtttt < 1:3759054/35‑1 (MQ=255) acCCCCGGGCAGAAATGTCTGGGGGTTTTTCtttt < 1:986068/35‑1 (MQ=255) acCCCAGGGCAGAAATGTCTGGGGGTTTTTCtttt < 1:16258250/35‑1 (MQ=255) cccccgacgttatgctcggcagggtactgcgcgcc > 1:4003540‑M2/1‑3 (MQ=255) cccccGGGCAGAAATGTCTGGGGGTTTTTCTTTTg > 1:8430976/1‑35 (MQ=255) cacccGGGCAGAAATGTCTGGGGGTTTTTCTTTTg < 1:11883228/33‑1 (MQ=255) ccccgacgttatgctcggcagggtactgcgcgccg > 1:14213556‑M2/1‑2 (MQ=255) ccccgacgttatgctcggcagggtactgcgcgccg > 1:11647137‑M2/1‑2 (MQ=255) ccccGGGCAGAAATGTCTGGGGGTTTTTCTTTTgg > 1:11829115/1‑35 (MQ=255) cccGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGt > 1:9033324/1‑35 (MQ=255) cccGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGt < 1:1231017/35‑1 (MQ=255) | TAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGT > REL606/4351390‑4351458 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |