New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 98960956 (0.540)13 (0.160) 4/38 NT 32.0% coding (766/894 nt) ycbJ hypothetical protein
?REL606 2795469 = 11 (0.140)coding (831/873 nt) ygcG hypothetical protein

ATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/989571‑989609
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGGC  >  REL606/2795469‑2795502
                                                                         
ATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTG                                        >  1:17466979/1‑35
ATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTG                                        >  1:19220449/1‑35
ATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTG                                        >  1:13839767/1‑35
 TTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGG                                       >  1:9027900/1‑35
 TTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGG                                       >  1:1597519/1‑35
  TTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGC                                      <  1:17048665/35‑1
  TTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGC                                      <  1:7518429/35‑1
  TTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGC                                      <  1:5868205/35‑1
  TTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGC                                      <  1:14668023/35‑1
  TTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGC                                      <  1:4090033/35‑1
   TGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCG                                     <  1:13629086/35‑1
   TGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCG                                     >  1:13915821/1‑35
   TGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCG                                     <  1:12368150/35‑1
   TGCTCTGGAGTTACATGCAACGCGCGCCAGTGGCG                                     <  1:5213967/35‑1
    GCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG                                    >  1:13547320/1‑35
    GCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG                                    <  1:6104612/35‑1
    GCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG                                    >  1:12273941/1‑35
    GCTCTGGAGTTACCTGCAACGCGCCCCAGTGGCGG                                    >  1:19352679/1‑35
     CTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGG                                   >  1:10481470/1‑35
      TCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGGG                                  >  1:17102860/1‑35
      TCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGGG                                  >  1:7944263/1‑35
       CTGGAGTTACCTTCAACGCGCGCCAGTGGCGGGGG                                 >  1:4592357/1‑35
       CTGGAGTTACCTGCAACGCGCGCCAGTGGCGGGGG                                 >  1:8718294/1‑35
        TGGAGTTACGTGCAACGCGCGCCAGTGGCGGGGGg                                >  1:14687469/1‑34
         GGAGTTACCTGCAACGCGCGCCAGTGGCGGGGGCa                               >  1:13625183/1‑34
         GGAGTTACCTGCAACGCGCGCCAGTGGCGGGGGCG                               >  1:3193225/1‑35
          GAGTTACCTGCAACGCGCGCCAGTGGCGGGGGagt                              >  1:17837103/1‑32
          GAGTTACCTGCAACGCGCGCCAGTGGCGGGGGCGt                              >  1:20112009/1‑34
          GAGTTACCTGCAACGCGCGCCAGTGGCGGGGGCGG                              >  1:256790/1‑35
          GAGTTACCTGCAACGCGCGCCAGTGGCGGGGGCGG                              >  1:3733318/1‑35
           AGTTACCTGCAACGCGCGCCAGTGGCGGGGGGGGT                             >  1:209421/1‑35
           AGTTACCTGCAACGCGCGCCAGTGGCGGGGGCGGT                             >  1:9407853/1‑35
            GTTACCTGCAACGCGCGCCAGTGGCGGGGGGGGTc                            >  1:703186/1‑34
            GTTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTg                            >  1:16866409/1‑34
            GTTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTc                            >  1:18471756/1‑34
            GTTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTc                            >  1:17744746/1‑34
            GTTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTT                            >  1:2566668/1‑35
             TTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTcc                           >  1:17778729/1‑33
             TTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTca                           >  1:1318561/1‑33
             TTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTTC                           >  1:6223488/1‑35
               ACCTGCAACGCGCGCCAGTGGCGGGGTCGGTTCTc                         >  1:11433879/1‑34
                                  tGCGGGGGCGGTTATTCTGGAGGTGGCGGCGCATC      <  1:11993433/34‑1
                                   GCGGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCC     <  1:15607195/35‑1
                                   GCGGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCC     <  1:7857409/35‑1
                                    CGGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCG    <  1:3707507/35‑1
                                    CGGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCG    <  1:17137562/35‑1
                                     GGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGG   <  1:2422434/35‑1
                                     GGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGG   <  1:9939635/35‑1
                                      GGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGGC  <  1:15429025/35‑1
                                                                         
ATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/989571‑989609
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGGC  >  REL606/2795469‑2795502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.