New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1495445 = | 79 (0.770) | 10 (0.110) | 4/44 | NT | 13.0% | coding (648/1500 nt) | ansP | L‑asparagine transporter |
? | REL606 | 3277263 = | 61 (0.650) | coding (763/987 nt) | yrbH | D‑arabinose 5‑phosphate isomerase |
TTTCATTTAATCACCGATAATGGCGGCTTCTTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1495480‑1495445 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGACGGTGATTTACGCCGTGTCTTCGATATGGGCG > REL606/3277263‑3277296 TTTCATTTAATCACCGATAATGGCGGCTTCTTCCC < 1:3064438/35‑1 TTCATTTAATCCCCGATAATGGCGGCTTCTTCCCC < 1:10306914/35‑1 TTCATTTAATCACCGATAATGGCGGCTTCTTCCCC < 1:12094359/35‑1 TTCATTTAATCACCGATAATGGCGGCTTCTTCCCC < 1:2169195/35‑1 aGGCTTCTTCCCCGACGGTGATTTACGCCGTGTCT < 1:4288075/34‑1 CGGCTTCTTCCCCGACGGTGATTTACGCCGTGTCT < 1:20593172/35‑1 GCTTTTTCCCCGACGGTGATTTACGCCGTGTCTTC < 1:11223957/35‑1 GCTTCTTCCCCGACGGTGATTTACGCCGTGTCTTC < 1:2690099/35‑1 CTTTTTCCCCGACGGTGATTTACGCCGTGTCTTCG < 1:8462038/35‑1 CTTTTTCCCCGACGGTGATTTACGCCGTGTCTTCG < 1:11993750/35‑1 CTTCTTCCCCGACGGTGATTTACGCCGTGTCTTCG < 1:8514444/35‑1 CTTCTTCCCCGACGGTGATTTACGCCGTGTCTTCG < 1:7029678/35‑1 CTTCTTACCCGACGGTGATTTACGCCGTGTCTTCG < 1:13371140/35‑1 TTCTTCCCCGACGGTGATTTACGCCGTGTCTTCGA < 1:944810/35‑1 CTTCCCCGACGGTGATTTACGCCGTGTCTTCGATA < 1:8244181/35‑1 CTTCCCCGACGGTGATTTACGCCGTGTCTTCGATA < 1:15063973/35‑1 tttCCCGACGGTGATTTACGCCGTGTCTTCGATAT < 1:11270761/32‑1 TTCCCCGACGGTGATTTACGCCGTGTCTTCGATAT < 1:20022954/35‑1 ttCCCGACGGTGATTTACGCCGTGTCTTCGATATG < 1:2621549/33‑1 TCCCCGACGGTGATTTACGCCGTGTCTTCGATATG < 1:8658172/35‑1 TCCCCGACGGTGATTTACGCCGTGTCTTCGATATG < 1:13811692/35‑1 tCCCGACGGTGATTTACGCCGTGTCTTCGATATGG < 1:11481198/34‑1 CCCCGACGGTGATTTACGCCGTGTCTTCGATATGG < 1:17056051/35‑1 CCCCGACGGTGATTTACGCCGTGTCTTCGATATGG < 1:13128978/35‑1 CCCGACGGTGATTTACGCCGTGTCTTCGATATGGG < 1:14049030/35‑1 CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC > 1:1060413/1‑35 CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC < 1:9141252/35‑1 CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC < 1:7488057/35‑1 CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC < 1:566217/35‑1 CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC < 1:5177673/35‑1 CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC < 1:20182064/35‑1 CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC < 1:20141091/35‑1 CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC > 1:1708441/1‑35 CCGACGGTGATTTACGCCGTGTCTTCGATATAGGC < 1:15583704/35‑1 CGACGGTGATTTACGCCGTGTCTTCGATATGGGCG > 1:4439616/1‑35 CGACGGTGATTTACGCCGTGTCTTCGATATGGGCG < 1:14444920/35‑1 CGACGGTGATTTACGCCGTGTCTTCGATATGGGCG > 1:11355178/1‑35 CGACGGTGATTTACGCCGTGTCTTCGATATGGGCG > 1:16937385/1‑35 TTTCATTTAATCACCGATAATGGCGGCTTCTTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1495480‑1495445 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGACGGTGATTTACGCCGTGTCTTCGATATGGGCG > REL606/3277263‑3277296 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |