New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 187382 = | 110 (1.070) | 13 (0.150) | 3/40 | NT | 14.9% | coding (530/813 nt) | yaeI | predicted phosphatase |
? | REL606 | 3669194 = | 57 (0.670) | coding (1242/2031 nt) | malS | periplasmic alpha‑amylase precursor |
GGTGACTTATGGGCCGGACAATGCAAACCACCTCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/187419‑187382 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATG > REL606/3669194‑3669227 GGTGACTTATGGGCCGGACAATGCAAACCACCTCC > 1:12872145/1‑35 GGTGACTTATGGGCCGGACAATGCAAACCACCTCC > 1:20237073/1‑35 GGTGACTTATGGGCCGGACAATGCAAACCACCTCC > 1:14848569/1‑35 GTGACTTATGGGCCGGACAATGCAAACCACCTCCC < 1:8602492/35‑1 TGACTTATGGGCCGGACAATGCAAACCACCTCCCG < 1:5206560/35‑1 TGACTTATGGGCCGGACAATGCAAACCACCTCCCG > 1:12193150/1‑35 TGACTTATGGGCCGGACAATGCAAACCACCTCCCG > 1:17114070/1‑35 TGACTTATGGGCCGGACAATGCAAACCACCTCCCG > 1:2658420/1‑35 TGACTGATGGGCCGGACAATGCAAACCACCTCCCG < 1:9033161/35‑1 GACTTATGGGCCGGACAATGCAAACCACCTCCCGC < 1:2555609/35‑1 GACTTATGGGCCGGACAATGCAAACCACCTCCCGC > 1:7048106/1‑35 GACTTATGGGCCGGACAATGCAAACCACCTCCCGC > 1:3168509/1‑35 ccCAAACCACCTCCCGCTTCTGGTCTGCCGGTGTT < 1:5142193/33‑1 ccCAAACCACCTCCCGCTTCTGGTCTGCCGGTGTT < 1:19612017/33‑1 ccCAAACCACCTCCCGCTTCTGGTCTGCCGGTGTT < 1:4046951/33‑1 cCAAACCACCTCCCGCTTCTGGTCTGCAGGTGTTC < 1:16269114/34‑1 CAAACCACCTCCCGCTTCTGGTCTGCCGGTGTTCT < 1:294200/35‑1 CAAACCACCTCCCGCTTCTGGTCTGCCGGTGTTCT < 1:16125137/35‑1 AAACCACCTCCCGCTTCTGGTCTGCCGGTGTTCTA < 1:16852821/35‑1 AAACCACCTCCCGCTTCTGGTCTGCCGGTGTTCTA < 1:13339535/35‑1 AAACAACCTCCCGCTTCTGGTCTGCCGGTGTTCTA < 1:13435265/35‑1 AAAACACCTCCCGCTTCTGGTCTGCCGGTGTTCTA < 1:16264115/35‑1 AACCCCCTCCCGCTTCTGGTCTGCCGGTGTTCTAT < 1:18360853/35‑1 AACCACCTCCCGCTTCTGGTCTGCCGGTGTTCTAT < 1:5416776/35‑1 AACCACCTCCCGCTTCTGGTCTGCCGGTGTTCTAT < 1:16290038/35‑1 ccCCTCCCGCTTCTGGTCTGCCGGTGTTCTATAAA < 1:14821356/33‑1 ACCCCCCGCTTCTGGTCTGCCGGTGTTCTATAAAA < 1:11961795/35‑1 CCTCCCGCTTCTGGTCTGCCGGTGTTCTATAAAAA < 1:15528311/35‑1 ccCCCGCTTCTGGTCTGCCGGTGTTCTATAAAAAC < 1:848831/33‑1 cCCCGCTTCTGGTCTGCCGGTGTTCTATAAAAACA < 1:20355427/34‑1 cCCCGCTTCTGGTCTGCCGGTGTTCTATAAAAACA < 1:5869020/34‑1 cCCCGCTTCTGGTCTGCCGGTGTTCTATAAAAACA < 1:3339635/34‑1 CCGCTTCTGGTCTGCCGGTGTTGTATAAAAACAAA > 1:5217732/1‑35 CCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAA > 1:1899900/1‑35 CCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAA > 1:20128452/1‑35 CCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAA < 1:18250113/35‑1 CCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAA < 1:2737740/35‑1 CCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAA < 1:14505979/35‑1 CCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAA > 1:3863970/1‑35 CGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAA > 1:2318062/1‑35 CGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAA > 1:19512655/1‑35 CGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAA > 1:16766596/1‑35 CGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAA > 1:16106640/1‑35 CGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAA < 1:15223935/35‑1 GCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAAT < 1:1617130/35‑1 GCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAAT < 1:15778419/35‑1 GCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAAT < 1:8784817/35‑1 CTTCTGGTCTGCCTGTGTTCTATAAAAACAAAATG > 1:9430612/1‑35 CTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATG > 1:13392840/1‑35 CTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATG < 1:12769935/35‑1 GGTGACTTATGGGCCGGACAATGCAAACCACCTCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/187419‑187382 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATG > REL606/3669194‑3669227 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |