New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3016826 = | 44 (0.430) | 12 (0.160) | 5/36 | NT | 14.8% | coding (561/741 nt) | ECB_02817 | KpsU protein |
? | REL606 | 3882315 = | 105 (1.360) | coding (103/816 nt) | atpB | F0F1 ATP synthase subunit A |
Only 100 of 114 total aligned reads displayed.
TTTACGCTTATCGTCGCGATGTGCTGCAAAACTACAGCCAGTTACCGGAGTCCATGCAGGAGCAGGCAG > REL606/3016792‑3016860 | tttACGCTTATCGTCGCGATGTGCTGCAAAACTAc > 1:11017970/1‑35 (MQ=255) tttACGCTTATCGTCGCGATGTGCTGCAAAACTAc > 1:8231962/1‑35 (MQ=255) tttACGCTTATCGTCGCGATGTGCTGCAAAACTAc > 1:6574268/1‑35 (MQ=255) tttACGCTTATCGTCGCGATGTGCTGCAAAACTAc > 1:7480057/1‑35 (MQ=255) ttACGCTTATCGTCGCGATGTGCTGCAAAACTACa < 1:2562334/35‑1 (MQ=255) tacattctcgctggtggatccacaaaaccccccag > 1:18029413‑M1/33‑35 (MQ=255) tacattctcgctggtggatccacaaaaccccccag < 1:9085420‑M1/3‑1 (MQ=255) tacattctcgctggtggatccacaaaaccccccag < 1:10925614‑M1/3‑1 (MQ=255) tacattctcgctggtggatccacaaaaccccccag < 1:12883888‑M1/3‑1 (MQ=255) tacattctcgctggtggatccacaaaaccccccag > 1:12829738‑M1/33‑35 (MQ=255) tacattctcgctgatggatccacaaaaccccccag > 1:13145248‑M1/33‑35 (MQ=255) tacattctcgcgggtggatccacaaaaccccccag > 1:18909907‑M1/33‑35 (MQ=255) tACGCTTATCGTCGCGATGTGCTGCAAAACTACAg > 1:6179895/1‑35 (MQ=255) tACGCTTATCGTCGCGATGTGCTGCAAAACTACAg > 1:5676222/1‑35 (MQ=255) tACGCTTATCGTCGCGATGTGCTGCAAAACTACAg > 1:4924119/1‑35 (MQ=255) tACGCTTATCGTCGCGATGTGCTGCAAAACTACAg > 1:20223512/1‑35 (MQ=255) acattctcgctggtggatccacaaaaccccccagc < 1:11632022‑M1/4‑1 (MQ=255) acattctcgctggtggatccacaaaaccccccagc > 1:12798440‑M1/32‑35 (MQ=255) acattctcgctggtggatccacaaaaccccccagc > 1:8530939‑M1/32‑35 (MQ=255) aCGCTTATCGTCGCGATGTGCTGCAAAACTACAGc < 1:2112447/35‑1 (MQ=255) aCGCTTATCGTCGCGATGTGCTGCAAAACTACAGc < 1:19306273/35‑1 (MQ=255) aCGCTTATCGTCGCGATGTGCTGCAAAACTACAGc < 1:8540191/35‑1 (MQ=255) cattctcgctggtggatccacaaaaccccccagcc < 1:17195532‑M1/5‑1 (MQ=255) cattctcgctggtggatccacaaaaccccccagcc < 1:12896502‑M1/5‑1 (MQ=255) cattctcgctggtggatccacaaaaccccccagcc < 1:7434918‑M1/5‑1 (MQ=255) cGCTTATCGTCGCGATGTGCTGCAAAACTACAGcc > 1:14992577/1‑35 (MQ=255) cGCTTATCGTCGCGATGTGCTGCAAAACTACAGcc > 1:1523416/1‑35 (MQ=255) cGCTTATCGTCGCGATGTGCTGCAAAACTACAGcc > 1:6736766/1‑35 (MQ=255) cGCTTATCGTCGCGATGTGCTGCAAAACTACAGcc > 1:18298077/1‑35 (MQ=255) cGCTTATCGTCGCGATGTGCTGCAAAACTACAGcc > 1:4212112/1‑35 (MQ=255) gCTTATCGTCGCGATGTGCTGCAAAACTACAGCCa > 1:6697598/1‑35 (MQ=255) attctcgctggttgatccacaaaaccccccagcca < 1:6431257‑M1/6‑1 (MQ=255) attctcgctggtggatccacaaaaccccccagcca < 1:11692488‑M1/6‑1 (MQ=255) attctcgctggtggatccacaaaaccccccagcca > 1:1982484‑M1/30‑35 (MQ=255) cTTATCGTCGCGATGTGCTGCAAAACTACAGCCAg > 1:11312953/1‑35 (MQ=255) ttATCGTCGCGATGTGCTGCAAAACTACAGCCAGt > 1:19847061/1‑35 (MQ=255) ttATCGTCGCGATGTGCTGCAAAACTACAGCCAGt > 1:6482240/1‑35 (MQ=255) tATCGTCGCGATGTGCTGCAAAACTACAGCCAGtt > 1:79200/1‑35 (MQ=255) tATCGTCGCGATGTGCTGCAAAACTAAAGCCAgat > 1:9096447/1‑33 (MQ=37) aTCGTCGCGATGTGCTGCAAAACTACAGCCAGTTa > 1:178624/1‑35 (MQ=255) tcgtcgCGATGTGCTGCAAAACTACAGCCAGTTAc > 1:19463061/1‑35 (MQ=255) cgtcgCGATGTGCTGCAAAACTACAGCCAGTTAcc > 1:4096555/1‑35 (MQ=255) cgtcgCGATGTGCTGCAAAACTACAGCCAGTTAcc > 1:5654750/1‑35 (MQ=255) gtcgCGATGTGCTGCAAAACTACAGCCAGTTACCg > 1:5178657/1‑35 (MQ=255) gtcgCGATGTGCTGCAAAACTACAGCCAGTTACCg > 1:17451975/1‑35 (MQ=255) gtcgCGATGTGCTGCAAAACTACAGCCAGTTACCg > 1:3510383/1‑35 (MQ=255) gcgATGTGCTGCAAAACTACAGCCAGTTACCGGAg > 1:18697824/1‑35 (MQ=255) cgATGTGCTGCAAAACTACAGCCAGTTACCGGAGt > 1:15280512/1‑35 (MQ=255) cgATGTGCTGCAAAACTACAGCCAGTTACCGGAGt > 1:14879467/1‑35 (MQ=255) cgATGTGCTGCAAAACTACAGCCAGTTACCGGAGt > 1:19996605/1‑35 (MQ=255) gATGTGCTTCAAAACTACAGCCAGTTACCGGAGTc > 1:340214/1‑35 (MQ=255) gATGTGCTGCAAAACTACAGCCAGTTACCGGAGTc > 1:18897051/1‑35 (MQ=255) gATGTGCTGCAAAACTACAGCCAGTTACCGGAGTc > 1:18254039/1‑35 (MQ=255) gATGTGCTGCAAAACTACAGCCAGTTACCGGAGTc > 1:9412153/1‑35 (MQ=255) aTGTGCCGCAAAACTACAGCCAGTTACCGGAGTcc > 1:19396395/1‑35 (MQ=255) gtgCTGCAAAACTACAGCCAGTTACCGGAGTCCAt > 1:6427624/1‑35 (MQ=255) tgctgcAAAACTACAGCCAGTTACCGGAGTCCATg > 1:12546308/1‑35 (MQ=255) tgctgcAAAACTACAGCCAGTTACCGGAGTCCATg > 1:5436985/1‑35 (MQ=255) ctgcAAAACTACAGCCAGTTACCGGAGTCCATGCa > 1:12000479/1‑35 (MQ=255) tgcAAAACTACAGCCAGTTACCGGAGTCCATGCAg > 1:17369784/1‑35 (MQ=255) tacaacccccCAGCCAGTTACCGGAGTCCATGCAg > 1:3104288‑M1/11‑35 (MQ=255) cacaacccccCAGCCAGTTACCGGAGTCCATGCAg > 1:19055405‑M1/11‑35 (MQ=255) gcAAAACTACAGCCAGTTACCGGAGTCCATGCAgg > 1:17141415/1‑35 (MQ=255) acaacccccCAGCCAGTTACCGGAGTCCATGCAgg > 1:8148853‑M1/10‑35 (MQ=255) caacccccCAGCCAGTTACCGGAGTCCATGCAGGa > 1:10053933‑M1/9‑35 (MQ=255) caacccccCAGCCAGTTACCGGAGTCAATGCAGGa > 1:6856697‑M1/9‑35 (MQ=255) cAAAACTACAGCCAGTTACCGGAGTCCACGCATGa > 1:10356/1‑35 (MQ=37) aaacccccCAGCCAGTTACCGGAGTCCATGCAGGa > 1:11174834‑M1/9‑35 (MQ=255) aacccccCAGCCAGTTACCGGAGTCCATGCAGGAg > 1:7055214‑M1/8‑35 (MQ=255) aacccccCAGCCAGTTACCGGAGTCCATGCAGGAg > 1:3061332‑M1/8‑35 (MQ=255) aaaccccCAGCCAGTTACCGGAGTCCATGCAGGAg > 1:18900140‑M1/8‑35 (MQ=255) aaaaCTACAGCCAGTTACCGGAGTCCATGCAGGAg > 1:16189747/1‑35 (MQ=255) acccccCAGCCAGTTACCGGAGTCCATGCAGGAgc > 1:6961041‑M1/7‑35 (MQ=255) aaaCTACAGCCAGTTACCGTAGTCCATGCAGGAgc > 1:8100749/1‑35 (MQ=255) aaaCTACAGCCAGTTACCGGAGTCCATGCAGGAgc > 1:12014599/1‑35 (MQ=255) aaaCTACAGCCAGTTACCGGAGTCCATGCAGGAgc > 1:19236703/1‑35 (MQ=255) aaaCTACAGCCAGTTACCGGAGTCCATGCAGGAgc > 1:10680163/1‑35 (MQ=255) aaaCTACAGCCAGTTACCGGAGTCCATGCAGGAgc > 1:16621427/1‑35 (MQ=255) aaaCTACAGCCAGTTACCGGAGTCCATGCAGGAgc > 1:3740326/1‑35 (MQ=255) cccccCAGCCAGTTACCGGAGTCCATGCAGGAgca > 1:10157847‑M1/6‑35 (MQ=255) aaCTACAGCCAGTTACCGGCGGCCATGCAGGAgcc > 1:15644401/1‑34 (MQ=25) ccccCAGCCAGTTACCGGAGTCCATGCAGGAgcag > 1:1466420‑M1/5‑35 (MQ=255) ccccCAGCCAGTTACCGGAGTCCATGCAGGAgcag > 1:1728341‑M1/5‑35 (MQ=255) ccccCAGCCAGTTACCGGAGTCCATGCAGGAgcag > 1:12400399‑M1/5‑35 (MQ=255) aCTACAGCCAGTTACCGGAGTCCATGCAGGAgcag > 1:12985588/1‑35 (MQ=255) aCTACAGCCAGTTACCGGAGTCCATGCAGGAgcag > 1:11227676/1‑35 (MQ=255) aCTACAGCCAGTTACCGGAGTCCATGCAGGAgcag > 1:5637724/1‑35 (MQ=255) aCTACAGCCAGTTACCGGAGTCCATGCAGGAgcag > 1:9167819/1‑35 (MQ=255) cccCAGCCAGTTACCGGAGTCCATGCAGGAgcagg > 1:5647560‑M1/4‑35 (MQ=255) cTACAGCCAGTTACCGGAGTCCATGCAGGAgcagg > 1:20476511/1‑35 (MQ=255) tACAGCCAGTTACCGGAGTCCATGCAGGAgcaggc > 1:8010633/1‑35 (MQ=255) tACAGCCAGTTACCGGAGTCCATGCAGGAgcaggc > 1:1291807/1‑35 (MQ=255) ccCAGCCAGTTACCGGAGTCCATGCAGGAgcaggc > 1:14761317‑M1/3‑35 (MQ=255) cCAGCCAGTTACCGGAGTCCATGCAGGAgcaggca > 1:2013881‑M1/2‑35 (MQ=255) cCAGCCAGTTACCGGAGTCCATGCAGGAgcaggca > 1:4133008‑M1/2‑35 (MQ=255) cCAGCCAGTTACAGGAGTCCATGCAGGAgcaggca > 1:15103180‑M1/2‑35 (MQ=255) aCAGCCAGTTACCGGAGTCCATGCAGGAgcaggca > 1:7346061/1‑35 (MQ=255) aCAGCCAGTTACCGGAGTCCATGCAGGAgcaggca > 1:15678091/1‑35 (MQ=255) aCAGCCAGTTACCGGAGTCCATGCAGGAgcaggca > 1:19941892/1‑35 (MQ=255) CAGCCAGTTACCGGAGTCCATGCAGGAgcaggcag > 1:16607291‑M1/1‑35 (MQ=255) | TTTACGCTTATCGTCGCGATGTGCTGCAAAACTACAGCCAGTTACCGGAGTCCATGCAGGAGCAGGCAG > REL606/3016792‑3016860 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |