New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3866966 | 86 (0.840) | 18 (0.180) | 8/46 | NT | 20.6% | intergenic (‑32/+254) | bglG/phoU | transcriptional antiterminator of the bgl operon/negative regulator of PhoR/PhoB two‑component regulator |
? | REL606 | = 3887469 | 56 (0.570) | intergenic (‑105/‑47) | asnC/asnA | DNA‑binding transcriptional dual regulator/asparagine synthetase AsnA |
Only 100 of 158 total aligned reads displayed.
CATAGCAAGGACCTTTTTTATAAACAAAAAAACCCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTT > REL606/3866932‑3867000 | aTAGCAAGGACCTTTTTTATAAACAAAAAAACCCg > 1:15685166/1‑35 (MQ=255) aTAGCAAGGACCTTTTTTATAAACAAAAAAACCCg < 1:19755877/35‑1 (MQ=255) tAGCAAGGACCTTTTTTATAAACAAAAAAACCCGa > 1:7823214/1‑35 (MQ=255) tAGCAAGGACCTTTTTTATAAACAAAAAAACCCGa < 1:3474614/35‑1 (MQ=255) aGCAAGGACCTTTTTTATAAACAAAAAAACCCGAc > 1:8630908/1‑35 (MQ=255) aGCAAGGACCTTTTTTATAAACAAAAAAACCCGAc < 1:5535465/35‑1 (MQ=255) gCAAGGACCTTTTTTATAAACAAAAAAACCCGACt > 1:9538989/1‑35 (MQ=255) gCAAGGACCTTTTTTATAAACAAAAAAACCCGACt > 1:16658512/1‑35 (MQ=255) cAAGGACCTTTTTTATAAACAAAAAAACCCGACtt > 1:12731249/1‑35 (MQ=255) cAAGGACCTTTTTTATAAACAAAAAAACCCGACtt < 1:14978480/35‑1 (MQ=255) cAAGGACCTTTTTTATAAACAAAAAAACCCGACtt < 1:19695462/35‑1 (MQ=255) cAAGGACCTTTTTTATAAACAAAAAAACCCGACtt < 1:8235653/35‑1 (MQ=255) cAAGGACCTTTTTTATAAACAAAAAAACCCGACtt > 1:9559574/1‑35 (MQ=255) aaGGACCTTTTTTATAAACAAAAAAACCCGACTTc > 1:19059787/1‑35 (MQ=255) aGGACCTTTTTTATAAACAAAAAAACCCGACTTCa > 1:3455872/1‑35 (MQ=255) aGGACCTTTTTTATAAACAAAAAAACCCGACTTCa < 1:6706915/35‑1 (MQ=255) aGGACCTTTTTTATAAACAAAAAAACCCGACTTCa < 1:9823799/35‑1 (MQ=255) aGGACCTTTTTTATAAACAAAAAAACCCGACTTCa > 1:11819908/1‑35 (MQ=255) ggACCTTTTTTATAAACAAAAAAACCCGACTTCAc > 1:18102453/1‑35 (MQ=255) ggACCTTTTTTATAAACAAAAAAACCCGACTTCAc > 1:13449010/1‑35 (MQ=255) ggACCTTTTTTATAAACAAAAAAACCCGACTTCAc > 1:20570377/1‑35 (MQ=255) ggACCTTTTTTATAAACAAAAAAACCCGACTTCAc < 1:2809339/35‑1 (MQ=255) gACCTTTTTTATAAACAAAAAAACCCGACTTCAcc > 1:6989366/1‑35 (MQ=255) aCCTTTTTTATAAACAAAAAAACCCGACTTCACCa > 1:9022279/1‑35 (MQ=255) aCCTTTTTTATAAACAAAAAAACCCGACTTCACCa > 1:10610629/1‑35 (MQ=255) ccTTTTTTATAAACAAAAAAACCCGACTTCACCAg < 1:17130246/35‑1 (MQ=255) ccTTTTTTATAAACAAAAAAACCCGACTTCACCAg < 1:18016988/35‑1 (MQ=255) ccTTTTTTATAAACAAAAAAACCCGACTTCACCAg < 1:2242825/35‑1 (MQ=255) ccTTTTTTATAAACAAAAAAACCCGACTTCACCAg > 1:15276421/1‑35 (MQ=255) ccTTTTTTATAAACAAAAAAACCCGACTTCACCAg < 1:7084053/35‑1 (MQ=255) cTTTTTTATAAACAAAAAAACCCGACTTCACCAGt < 1:12568397/35‑1 (MQ=255) cTTTTTTATAAACAAAAAAACCCGACTTCACCAGt > 1:6809310/1‑35 (MQ=255) ttttttATAAACAAAAAAACCCGACTTCACCAGTa > 1:15605138/1‑35 (MQ=255) ttttttATAAACAAAAAAACCCGACTTCACCAGTa > 1:16382661/1‑35 (MQ=255) ttttttATAAACAAAAAAACCCGACTTCACCAGTa < 1:10908326/35‑1 (MQ=255) tttttATAAACAAAAAAACCCGACTTCACCAGTAt > 1:15131720/1‑35 (MQ=255) tttttATAAACAAAAAAACCCGACTTCACCAGTAt > 1:1552177/1‑35 (MQ=255) tttttATAAACAAAAAAACCCGACTTCACCAGTAt < 1:3078554/35‑1 (MQ=255) ttttATAAACAAAAAAACCCGACTTCACCAGTAtt > 1:18217038/1‑35 (MQ=255) ttttATAAACAAAAAAACCCGACTTCACCAGTAtt < 1:17941387/35‑1 (MQ=255) ttATAAACAAAAAAACCCGACTTCACCAGTATtct > 1:4595460/1‑35 (MQ=255) tataAACAAAAAAACCCGACTTCACCAGTATtctc < 1:11926430/35‑1 (MQ=255) ataAACAAAAAAACCCGACTTCACCAGTATTctct < 1:12139920/35‑1 (MQ=255) ataAACAAAAAAACCCGACTTCACCAGTATTctct < 1:10170073/35‑1 (MQ=255) ataAACAAAAAAACCCGACTTCACCAGTATTctct < 1:15896325/35‑1 (MQ=255) ataAACAAAAAAACCCGACTTCACCAGTATTctct < 1:14508298/35‑1 (MQ=255) ataAAAAAAAAAACCCcgacacacatgcaataatg < 1:7938921‑M1/35‑20 (MQ=255) ataAAAAAAAAAACCCcgacacacatgcaataatc < 1:6271351‑M1/35‑20 (MQ=255) taAACAAAAAAACCCcgacacacatgcaataatca < 1:1792088‑M1/35‑21 (MQ=255) taAACAAAAAAACCCGACTTCACCAGTATTCTCTg > 1:602708/1‑35 (MQ=255) taAACAAAAAAACCCGACTTCACCAGTATTCTCTg > 1:12449019/1‑35 (MQ=255) taAACAAAAAAACCCGACTTCACCAGTATTCTCTg < 1:11991267/35‑1 (MQ=255) taAACAAAAAAACCCGACTTCACCAGTATTCTCTg > 1:9162236/1‑35 (MQ=255) aaaacAAAAAACCCCcgacacacatgcaataatca < 1:8085933‑M1/34‑21 (MQ=255) aaaaaAAAAAAACCCcgacacacatgcaataatca < 1:17303108‑M1/34‑21 (MQ=255) aaaCAAAAAAACCCGACTTCACCAGTATTCTCTgg > 1:14945987/1‑35 (MQ=255) aaaCAAAAAAACCCGACTTCACCAGTATTCTCTgg > 1:2613814/1‑35 (MQ=255) aaaCAAAAAAACCCGACTTCACCAGTATTCTCTgg > 1:5151102/1‑35 (MQ=255) aaaCAAAAAAACCCGACTTCACCAGTATTCTCTgg < 1:15856029/35‑1 (MQ=255) aaaaaaaaaaccccgacacacatgcaataatcatt < 1:5507627‑M1/32‑23 (MQ=255) aaCAAAAAAACCCGACTTCACCAGTATTCTCTGGt > 1:2794049/1‑35 (MQ=255) aCAAAAAAACCCcgacacacatgcaataatcattc < 1:852554‑M1/35‑24 (MQ=255) aCAAAAAAACCCGACTTCACCAGTATTCTCTGGtt < 1:10507294/35‑1 (MQ=255) aCAAAAAAACCCGACTTCACCAGTATTCTCTGGtt > 1:15694428/1‑35 (MQ=255) aCAAAAAAACCCGACTTCACCAGTATTCTCTGGtt > 1:8257144/1‑35 (MQ=255) aCAAAAAAACCCGACTTCACCAGTATTATCTGGtt < 1:7020603/35‑1 (MQ=255) cAAAAAAACCCcgacacacatgcaataatcattca < 1:16934027‑M1/35‑25 (MQ=255) cAAAAAAACCCGACTTCACCAGTATTCTCTGGTTa < 1:14640945/35‑1 (MQ=255) cAAAAAAACCCGACTTCACCAGTATTCTCTGGTTa > 1:13077880/1‑35 (MQ=255) caaaaaaaCCcgacacacatgcaataatcattcaa < 1:6887899‑M1/34‑26 (MQ=255) aaaaaaaCCCcgacacacatgcaataatcattcaa < 1:12527847‑M1/35‑26 (MQ=255) aaaaaaaCCCcgacacacatgcaataatcattcaa < 1:5349149‑M1/35‑26 (MQ=255) aaaaaaaCCCGACTTCACCAGTATTCTCTGGTTAt < 1:755350/35‑1 (MQ=255) aaaaaaaCCCGACTTCACCAGTATTCTCTGGTTAt < 1:4167401/35‑1 (MQ=255) aaaaaaaCCCGACTTCACCAGTATTCTCTGGTTAt > 1:16319707/1‑35 (MQ=255) aaaaaaaCCCGACTTCACCAGTATTCTCTGGTTAt < 1:6595772/35‑1 (MQ=255) aaaaaaCCCcgacacacatgcaataatcattcaat < 1:17039061‑M1/35‑27 (MQ=255) aaaaaCCCcgacacacatgcaataatcattcaata < 1:15281719‑M1/35‑28 (MQ=255) aaaaaCCCGACTTCACCAGTATTCTCTGGTTATGt < 1:12882320/35‑1 (MQ=255) aaaaaCCCGACTTCACCAGTATTCTCTGGTTATGt > 1:13444986/1‑35 (MQ=255) aaaaaCCCGACTTCACCAGTATTCTCTGGTTATGt < 1:19967094/35‑1 (MQ=255) aaaaCCCGACTTCACCAGTATTCTCTGGTTATGTc < 1:13147553/35‑1 (MQ=255) aaaaCCCGACTTCACCAGTATTCTCTGGTTATGTc < 1:19138304/35‑1 (MQ=255) aaCCCcgacacacatgcaataatcattcaataaaa < 1:2599450‑M1/35‑31 (MQ=255) aaCCCGACTTCACCAGTATTCTCTGGTTATGTCAg < 1:13115955/35‑1 (MQ=255) aaCCCGACTTCACCAGTATTCTCTGGTTATGTCAg > 1:7719553/1‑35 (MQ=255) aaCCCGACTTCACCAGTATTCTCTGGTTATGTCAg > 1:622250/1‑35 (MQ=255) aCCCcgacacacatgcaataatcattcaataaaaa < 1:10019203‑M1/35‑32 (MQ=255) aCCCGACTTCACCAGTATTCTCTGGTTATGTCAgg > 1:2917506/1‑35 (MQ=255) aCCCGACTTCACCAGTATTCTCTGGTTATGTCAgg < 1:4500975/35‑1 (MQ=255) aCCCGACTTCACCAGTATTCTCTGGTTATGTCAgg > 1:11368766/1‑35 (MQ=255) cccGACTTCACCAGTATTCTCTGGTTATGTCAggg > 1:4235980/1‑34 (MQ=255) cccgacacacatgcaataatcattcaataaaaagc < 1:1034588‑M1/35‑34 (MQ=255) ccGACTTCATAAGTATTCTCTGGTTATGTCAGGtt < 1:9246825/35‑1 (MQ=37) ccgacacacatgcaataatcattcaataaaaagcc > 1:10710946‑M1/1‑1 (MQ=255) ccgacacacatgcaataatcattcaataaaaagcc > 1:4120149‑M1/1‑1 (MQ=255) ccgacacacatgcaataatcattcaataaaaagcc < 1:17180400‑M1/35‑35 (MQ=255) ccgacacacatgcaataatcattcaataaaaagcc > 1:15502185‑M1/1‑1 (MQ=255) cGACTTCACCAGTATTCTCTGGTTATGTCAGGttt > 1:3306683/1‑35 (MQ=255) cGACTTCACCAGTATTCTCTGGTTATGTCAGGttt < 1:11374924/35‑1 (MQ=255) | CATAGCAAGGACCTTTTTTATAAACAAAAAAACCCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTT > REL606/3866932‑3867000 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |