Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 1,162,790 IS150 (–) +3 bp 41.7% coding (601‑603/1071 nt) plsX → fatty acid/phospholipid synthesis protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 664688 =NA (NA)45 (0.480) 28/44 NT 38.5% noncoding (1/1443 nt) IS150 repeat region
?REL606 1162790 = 62 (0.760)coding (601/1071 nt) plsX fatty acid/phospholipid synthesis protein
* ? REL606 = 666130NA (NA)46 (0.450) 24/48 NT 38.2% noncoding (1443/1443 nt) IS150 repeat region
?REL606 = 1162792 65 (0.720)coding (603/1071 nt) plsX fatty acid/phospholipid synthesis protein

GTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/666099‑666130
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTGAGGCATCCCGAATACTGTCGAGACCCTTT  <  REL606/1162792‑1162759
                                                                  
GTTTAACTGTCCAACTTTTTGTGGTCAGTACACGa                                 >  1:13217510/1‑34
 TTTAACTGTCCAACTTTTTTGGGTCAGTACACGCT                                >  1:80979/1‑35
  TTAACTGTCCAACTTTTTGGGGTCAGTACACGCTG                               <  1:15271786/35‑1
  TTAACTGTCCAACTTTTTGGGGTCAGTACACGCTG                               <  1:11326424/35‑1
   TAACTGTCCAACTTTTTGGGGTCAGTACACGCTGA                              <  1:7202552/35‑1
   TAACTGTCCAACTTTTTGGGGTCAGTACACGCTGA                              <  1:10732207/35‑1
   TAACTGTCCAACTTTTTGGGGTCAGTACACGCTGA                              >  1:19195676/1‑35
   TAACTGTCCAACTTTTTGGGGTCAGTACACGCTGA                              >  1:6923918/1‑35
    AACTGTCCAACTTTTTGGGGTCAGTACACGCTGAG                             <  1:15740683/35‑1
     ACTGTCCAACTTTTTGGGGTCAGTACACGCTGAGG                            <  1:284192/35‑1
      CTGTCCAACTTTTTGGGGTCAGTACACGCTGATGC                           >  1:19839340/1‑35
      CTGTCCAACTTTTTGGGGTCAGTACACGCTGATGC                           >  1:11068900/1‑35
      CTGTCCAACTTTTTGGGGTCAGTACACGCTGAGGC                           <  1:18597624/35‑1
      CTGTCCAACTTTTTGGGGTCAGTACACGCTGAGGC                           >  1:17634296/1‑35
        GTCCAACTTTTTGGGGTCAGTACACGCTGAGGCAT                         >  1:3556723/1‑35
        GTCCAACTTTTTGGGGTCAGTACACGCTGAGGCAT                         >  1:16053491/1‑35
         TCCAACTTTTTGGGGTCAGTACACGCTGAGGCATC                        >  1:15752045/1‑35
          CCAACTTTTTGGGGTCAGTACACGCTGAGGCATCC                       >  1:12408084/1‑35
          CCAACTTTTTGGGGTCAGTACACGCTGAGGCATCC                       >  1:11114101/1‑35
           CAACTTTTTGGGGTCAGTACACGCTGAGGCATCCC                      <  1:3174424/35‑1
           CAACTTTTTGGGGTCAGTACACGCTGAGGCATCCC                      <  1:2853877/35‑1
           CAACTTTTTGGGGTCAGTACACGCTGAGGCATCCC                      <  1:15395553/35‑1
            AACTTTTTGGGGTCAGTACACGCTGAGGCATCCCG                     <  1:2083892/35‑1
            AACTTTTTGGGGTCAGTACACGCTGAGGCATCCCG                     <  1:19645514/35‑1
            AACTTTTTGGGGTCAGTACACGCTGAGGCATCCCG                     <  1:10727446/35‑1
            AACTTTTTGGGGTCAGTACACGCTGAGGCATCCCG                     <  1:17847396/35‑1
               TTTTTTGGGTCAGTACACGCTGAGGCATCCCGAAT                  >  1:10331495/1‑35
               TTTTTGGGGTCAGTACACGCTGAGGCATCCCGAAT                  <  1:16063033/35‑1
               TTTTTGGGGTCAGTACACGCTGAGGCATCCCGAAT                  <  1:6302736/35‑1
               TTTTTGGGGTCAGTACACGCTGAGGCATCCCGAAT                  <  1:13695497/35‑1
               TTTTTGGGGTCAGTACACGCTGAGGCATCCCGAAT                  <  1:13746057/35‑1
               TTTTTGGGGTCAGTACACGCTGAGGCATCCAGAAT                  <  1:13105103/35‑1
                TTTTGGGGTCAGTACACGCTGAGGCATCCCGAATA                 <  1:4222608/35‑1
                 TTTGGGGTCAGTACACGCTGAGGCATCCCGAATAC                <  1:5080833/35‑1
                 TTTGGGGTCAGTACACGCTGAGGCATCCCGAATAC                >  1:12910833/1‑35
                  TTGGGGTCAGTACACGCTGAGGCATCCCGAATACT               >  1:15497572/1‑35
                     GGGTCAGTACATGCTGAGGCATCCCGAATACTGTC            >  1:17241625/1‑35
                     GGGTCAGTACACGCTGAGGCATCCCTAATACTGTC            >  1:634360/1‑35
                     GGGTCAGTACACGCTGAGGCATCCCGAATACTGTC            <  1:6464169/35‑1
                     GGGTCAGTACACGCTGAGGCATCCCGAATACTGTC            <  1:14142433/35‑1
                      GGTCAGTACACGCTGAGGCATCCCGAATACTGTCG           <  1:5183611/35‑1
                       GTCAGTACACGCTGAGGCATCCCGAATACTGTCGA          >  1:20293409/1‑35
                        TCAGTACACGCTGAGGCATCCCGAATACTGTCGAG         <  1:12449906/35‑1
                         CAGTACACGCTGAGGCATCCCGAATACTGTCGAGA        >  1:12752988/1‑35
                         CAGTACACGCTGAGGCATCCCGAATACTGTCGAGA        >  1:7319353/1‑35
                         CAGTACACGCTGAGGCATCCCGAATACTGTCGAGA        >  1:17467791/1‑35
                         CAGTACACGCTGAGGCATCCCGAATACTGTCGAGA        >  1:62892/1‑35
                          AGTACACGCTGAGGCATCCCGAATACTGTCGAGAC       >  1:10661108/1‑35
                          AGTACACGCTGAGGCATCCCGAATACTGTCGAGAC       >  1:1920385/1‑35
                          AGTACACGCTGAGGCATCCCGAATACTGTCGAGAC       >  1:4562851/1‑35
                           GTACACGCTGAGGCATCCCGAATACTGTCGAGACC      >  1:3803051/1‑35
                           GTACACGCTGAGGCATCCCGAATACTGTCGAGACC      <  1:13339260/35‑1
                           GTACACGCTGAGGCATCCCGAATACTGTCGAGACC      <  1:13885845/35‑1
                            TACACGCTGAGGCATCCCGAATACTGTCGAGACCC     <  1:6218190/35‑1
                             ACACGCTGAGGCATCCCGAATACTGTCGAGACCCT    >  1:5403620/1‑35
                              CACGCTGAGGCATCCCGAATACTGTCGAGACCCTT   <  1:7881293/35‑1
                              CACGCTGAGGCATCCCGAATACTGTCGAGACCCTT   <  1:16505176/35‑1
                               ACGCTGAGGCATCCCGAATACTGTCGAGACCCTTT  >  1:6183845/1‑35
                               ACGCTGAGGCATCCCGAATACTGTCGAGACCCTTT  >  1:3338767/1‑35
                               ACGCTGAGGCATCCCGAATACTGTCGAGACCCTTT  <  1:19536715/35‑1
                               ACGCTGAGGCATCCCGAATACTGTCGAGACCCTTT  <  1:17858300/35‑1
                               ACGCTGAGGCATACCGAATACTGTCGAGACCCTTT  <  1:955918/35‑1
                                                                  
GTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/666099‑666130
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTGAGGCATCCCGAATACTGTCGAGACCCTTT  <  REL606/1162792‑1162759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.