New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1398219 | 108 (1.050) | 6 (0.090) | 3/32 | NT | 8.5% | coding (725/1527 nt) | abgT | predicted cryptic aminobenzoyl‑glutamate transporter |
? | REL606 | = 1743481 | 58 (0.850) | coding (2472/3057 nt) | ydiJ | predicted FAD‑linked oxidoreductase |
Only 100 of 117 total aligned reads displayed.
CGGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1398178‑1398219 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccattTTCACCAAATGGCAAAGCCCAGCATATCAAAGGC < REL606/1743481‑1743448 CGGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCC > 1:15671182/1‑35 CGGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCC < 1:14244335/35‑1 CGGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCC > 1:7705789/1‑35 CGGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCC < 1:12725337/35‑1 CGGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCC > 1:13678264/1‑35 GGTCAATGTCTGCAGTTTCTCCTCGCTGTTTCCCT > 1:20175198/1‑35 GGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCT > 1:11239392/1‑35 GGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCT > 1:8330195/1‑35 GGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCT < 1:5172942/35‑1 GGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCT < 1:1371348/35‑1 GGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCT < 1:7174806/35‑1 GTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCTG > 1:16729502/1‑35 GTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCTG < 1:14886074/35‑1 GTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCTG < 1:9477427/35‑1 CAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCC > 1:10554852/1‑35 CAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCC < 1:16611452/35‑1 CAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCC > 1:16784477/1‑35 CAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCC > 1:16886679/1‑35 CAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCC > 1:15044257/1‑35 CAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCC > 1:8630188/1‑35 CAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCC < 1:3996352/35‑1 CAATGTATGCAGTTTCTCATCGCTGTTTCCCTGCC < 1:6850895/35‑1 AATGTCTGCAGTTTCTCATCGCTGTTTCCGTGCCA < 1:18644798/35‑1 AATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCA < 1:4802809/35‑1 AATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCA < 1:11951880/35‑1 TGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATT > 1:2177645/1‑35 TGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATT > 1:20597456/1‑35 TGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATT > 1:8103131/1‑35 TGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATT > 1:9776269/1‑35 TGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATT > 1:8094398/1‑35 TGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATT > 1:552323/1‑35 cCTGTGTCCCTGCCATTTTCACCAAATGGCAAAGC < 1:12280788/34‑1 CTGTTTCCCTGCCATTTTCACCAAATGGCAAAGCC < 1:6355704/35‑1 TGTGTCCCTGCCATTTTCACCAAATGGCAAAGCCC < 1:19954229/35‑1 ttgTCCCTGCCATTTTCACCAAATGGCAAAGCCCA < 1:5603668/32‑1 gtgTCCCTGCCATTTTCACCAAATGGCAAAGCCCA < 1:2397302/32‑1 GTTTCCCTGCCATTTTCACCAAATGGCAAAGCCCA < 1:4836768/35‑1 tcTCCCTGCCATTTTCACCAAATGGCAAAGCCCAG < 1:18257719/33‑1 TTTCCCTGCCATTTTCACCAAATGGCAAAGCCCAG < 1:11752041/35‑1 gTCCCTGCCATTTTCACCAAATGGCAAAGCCCAGC < 1:4821420/34‑1 TTCCCTGCCATTTTCACCAAATGGCAAAGCCCAGC < 1:5315197/35‑1 TCCCTGCCATTTTCACCAAATGGCAAAGCCCAGCA < 1:1328505/35‑1 TCCCTGCCATTTTCACCAAATGGCAAAGCCCAGCA < 1:15912276/35‑1 TCCCTGCCATTTTCACCAAATGGCAAAGCCCAGCA < 1:2696232/35‑1 CCCTGCCATTTTCACCAAATGGCAAAGCCCAGCAT < 1:6845051/35‑1 CCCTGCCATTTTCACCAAATGGCAAAGCCCAGCAT < 1:14657683/35‑1 CCCTGCCATTTTCACCAAATGGCAAAGCCCAGCAT < 1:11403994/35‑1 CCCTGCCATTTTCACCAAATGGCAAAGCCCAGCAT < 1:17097199/35‑1 CCCTGCCATTTTCACCAAATGGCAAAGCCCAGCAT < 1:19921442/35‑1 CCCTGCCATTTTCACCAAATGGCAAAGCCCAGCAT < 1:11001725/35‑1 CCTGCCATTTTCACCAAATGGCAAAGCCCAGCATA < 1:1985019/35‑1 CCTGCCATTTTCACCAAATGGCAAAGCCCAGCATA < 1:16076028/35‑1 CCTGCCATTTTCACCAAATGGCAAAGCCCAGCATA < 1:4395690/35‑1 CCTGCCATTTTCACCAAATGGCAAAGCCCAGCATA < 1:7559619/35‑1 CCTGCCATTTTAACCAAATGGCAAAGCCCAGCATA < 1:4713196/35‑1 CTGCCATTTTCACCAAATGGCAAAGCCCAGCATAT < 1:5298693/35‑1 CTGCCATTTTCACCAAATGGCAAAGCCCAGCATAT > 1:7365372/1‑35 CTGCCATTTTCACCAAATGGCAAAGCCCAGCATAT > 1:9362822/1‑35 CTGCCATTTTCACCAAATGGCAAAGCCCAGCATAT > 1:14653790/1‑35 CTGCCATTTTCACCAAATGGCAAAGCCCAGCATAT < 1:10656369/35‑1 CTGCCATTTTCACCAAATGGCAAAGCCCAGCATAT > 1:3759504/1‑35 CTGCCATTTTCACCAAATGGCAAAGCCCAGCATAT < 1:858670/35‑1 CTGCCATTTTCACCAAATGGCAAAGCCCAGCATAT < 1:15825591/35‑1 TGCCATTTTCACCAAATGGCAAAGCCCAGCATATC < 1:15324365/35‑1 GCCATTTTCACCAAATGGCAAAGCCCAGCATATCA < 1:4071585/35‑1 GCCATTTTCACCAAATGGCAAAGCCCAGCATATCA > 1:3130224/1‑35 GCCATTTTCACCAAATGGCAAAGCCCAGCATATCA > 1:20007338/1‑35 GCCATTTTCACCAAATGGCAAAGCCCAGCATATCA > 1:17965527/1‑35 GCCATTTTCACCAAATGGCAAAGCCCAGCATATCA < 1:8597862/35‑1 GCCATTTTCACCAAATGGCAAAGCCCAGCATATCA < 1:12462770/35‑1 GCCATTTTCACCAAATGGCAAAGCCCAGCATATCA > 1:20582678/1‑35 CCATTTTCACCAAATGGCAAAGCCCAGCATATCAA > 1:6459844/1‑35 CCATTTTCACCAAATGGCAAAGCCCAGCATATCAA < 1:6532684/35‑1 CCATTTTCACCAAATGGCAAAGCCCAGCATATCAA > 1:13616212/1‑35 CCATTTTCACCAAATGGCAAAGCCCAGCATATCAA < 1:7065525/35‑1 CCATTTTCACCAAATGGCAAAGCCCAGCATATCAA < 1:4614340/35‑1 CCATTTTCACCAAATGGCAAAGCCCAGCATATCAA < 1:4093239/35‑1 CCATTTTCACCAAATGGCAAAGCCCAGCATATCAA < 1:19438295/35‑1 CCATTTTCACCAAATGGCAAAGCCCAGCATATCAA < 1:19485022/35‑1 CATTTTCACCAAATGGCAAAGCCCAGCATATCAAA < 1:9454442/35‑1 CATTTTCACCAAATGGCAAAGCCCAGCATATCAAA > 1:10631489/1‑35 CATTTTCACCAAATGGCAAAGCCCAGCATATCAAA > 1:16741303/1‑35 CATTTTCACCAAATGGCAAAGCCCAGCATATCAAA > 1:5321620/1‑35 CATTTTCACCAAATGGCAAAGCCCAGCATATCAAA < 1:18730550/35‑1 ATTTTCACCAAATGGCAAAGCCCAGCATATCAAAG > 1:13920991/1‑35 TTTTCACCAAATGGCAAAGCCCAGCATATCAAAGG < 1:17761999/35‑1 TTTTCACCAAATGGCAAAGCCCAGCATATCAAAGG < 1:355730/35‑1 TTTTCACCAAATGGCAAAGCCCAGCATATCAAAGG > 1:20611052/1‑35 TTTTCACCAAATGGCAAAGCCCAGCATATCAAAGG > 1:14922342/1‑35 TTTTCACCAAATGGCAAAGCCCAGCATATCAAAGG < 1:8191266/35‑1 TTTCACCAAATGGCAAAGCCCAGCATATCAAAaga > 1:5709652/1‑32 TTTCACCAAATGGCAAAGCCCAGCATATCAAAGGC > 1:8230511/1‑35 TTTCACCAAATGGCAAAGCCCAGCATATCAAAGGC < 1:3059685/35‑1 TTTCACCAAATGGCAAAGCCCAGCATATCAAAGGC < 1:3421713/35‑1 TTTCACCAAATGGCAAAGCCCAGCATATCAAAGGC > 1:1205558/1‑35 TTTCACCAAATGGCAAAGCCCAGCATATCAAAGGC < 1:3515313/35‑1 TTTCACCAAATGGCAAAGCCCAGCATATCAAAGGC > 1:17142996/1‑35 TTTCACCAAATGGCAAAGCCCAGCATATCAAAGGC > 1:16356404/1‑35 TTTCACCAAATGGCAAAGCCCAGCATATCAAAGGC > 1:9653931/1‑35 TTTCACCAAATGGCAAAGCACAGCATATCAAAGGC < 1:4905587/35‑1 CGGTCAATGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1398178‑1398219 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccattTTCACCAAATGGCAAAGCCCAGCATATCAAAGGC < REL606/1743481‑1743448 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |