New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1539621 = | 78 (0.760) | 10 (0.120) | 3/38 | NT | 16.0% | coding (51/2400 nt) | dos | cAMP phosphodiesterase, heme‑regulated |
? | REL606 | = 4445223 | 43 (0.530) | coding (715/2139 nt) | nrdD | anaerobic ribonucleoside triphosphate reductase |
CATTTTTTTCCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1539636‑1539621 ‑‑‑‑‑‑‑‑‑‑‑ccgccAGCTACAACAAACATCGCAAGACCGCAGAAGAGT < REL606/4445223‑4445190 ccTTTTTTTCCCCGCCAGCTACAACAAACATCGCA < 1:14322535/33‑1 gTTTTTTTCCCCGCCAGCTACAACAAACATCGCAA < 1:10951186/34‑1 cTTTTTTTCCCCGCCAGCTACAACAAACATCGCAA < 1:9286767/34‑1 cTTTTTTTCCCCGCCAGCTACAACAAACATCGCAA < 1:17465494/34‑1 cTTTTTCCCCCGCCAGCTACAACAAACATCGCAAG < 1:10754952/34‑1 TTTTTTTCCCCGCCAGCTACAACAAACATCGCAAG < 1:2843361/35‑1 TTTTTTCCCCGCCAGCTACAACAAACATCGCAAGA < 1:2796183/35‑1 ttgTCCCCGCCAGCTACAACAAACATCGCAAGACC < 1:5036058/32‑1 tgTTCCCCGCCAGCTACAACAAACATCGCAAGACC < 1:1219349/33‑1 TTTTCCCCGCCAGCTACAACAAACATCGCAAGACC < 1:9391261/35‑1 TTTTCCCCGCCAGCTACAACAAACATCGCAAGACC < 1:6266175/35‑1 TTTTCCCCGCCAGCTACAACAAACATCGCAAGACC < 1:410494/35‑1 TTTCCCCGCCAGCTACAACAAACATCGCAAGACCG < 1:3719947/35‑1 TTTCCCCGCCAGCTACAACAAACATCGCAAGACCG < 1:19161025/35‑1 TTTCCCCCCCAGCTACAACAAACATCGCAAGACCG < 1:13736704/35‑1 TCCCCGCCAGCTACAACAAACATCGCAAGACCGCA < 1:20335024/35‑1 CCCCCCCAGCTACAACAAACATCGCAAGACCGCAG < 1:11706906/35‑1 CCCGCCAGCTACAACAAACATCGCAAGACCGCAGA < 1:16198704/35‑1 CCCGCCAGCTACAACAAACATCGCAAGACCGCAGA < 1:12241828/35‑1 CCCCCCAGCTACAACAAACATCGCAAGACCGCAGA < 1:8239174/35‑1 caaCCAGCTACAACAAACATCGCAAGACCGCAGAA < 1:19101916/32‑1 CCGCCAGCTACAACAAACATCGCAAGACCGCAGAA > 1:13077347/1‑35 CCGCCAGCTACAACAAACATCGCAAGACCGCAGAA > 1:7213603/1‑35 CGCCAGCTACAACAAACATCGCAAGACCGCAGAAG > 1:17884797/1‑35 CGCCAGCTACAACAAACATCGCAAGACCGCAGAAG > 1:16838807/1‑35 CGCCAGCTACAACAAACATCGCAAGACCGCAGAAG > 1:3948362/1‑35 GCCAGCTACAACAAACATCGCAAGACCGCAGAAGA > 1:8691362/1‑35 GCCAGCTACAACAAACATCGCAAGACCGCAGAAGA < 1:15230261/35‑1 GCCAGCTACAACAAACATCGCAAGAACGCAGAAGA < 1:14425745/35‑1 CCAGCTACAACAAACATCGCAAGACCGCAGAAGAG > 1:12931509/1‑35 CCAGCTACAACAAACATCGCAAGACCGCAGAAGAG > 1:11055983/1‑35 CCAGCTACAACAAACATCGCAAGACCGCAGAAGAG > 1:17953339/1‑35 CCAGCTACAACAAACATCGCAAGACCGCAGAAGAG > 1:17944585/1‑35 CCAGCTACAACAAACATCGCAAGACCGCAGAAGAG > 1:17013775/1‑35 CAGCTACAACAAACATCGCAAGACCGCAGAAGAGT < 1:3954295/35‑1 CAGCTACAACAAACATCGCAAGACCGCAGAAGAGT > 1:19559771/1‑35 CAGCTACAACAAACATCGCAAGACCGCAGAAGAGT > 1:7108504/1‑35 CAGCTACAACAAACATCGCAAGACCGCAGAAGAGT > 1:15745285/1‑35 CAGCTACAACAAACATCGCAAGACAGCAGAAGAGT < 1:19110677/35‑1 CATTTTTTTCCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1539636‑1539621 ‑‑‑‑‑‑‑‑‑‑‑ccgccAGCTACAACAAACATCGCAAGACCGCAGAAGAGT < REL606/4445223‑4445190 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |