New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 699047 | 102 (0.990) | 3 (0.040) | 3/36 | NT | 4.6% | coding (1314/1320 nt) | potE | putrescine/proton symporter: putrescine/ornithine antiporter |
? | REL606 | 1115826 = | 48 (0.620) | coding (428/834 nt) | csgG | outer membrane lipoprotein |
Only 100 of 119 total aligned reads displayed.
AACCCCGCCAGATTTGACGTTGCTTTCATAACCGATAATCGAACCTTCAACCATGATATTTGCCGCCGT > REL606/1115792‑1115860 | aaCCCCGCCAGATTTGACGTTGCTTTCATAACCGa > 1:13980176/1‑35 (MQ=255) aaCCCCGCCAGATTTGACGTTGCTTTCATAACCGa > 1:12622920/1‑35 (MQ=255) aCCCCGCCAGATTTGACGTTGCTTTCATAACCGAt > 1:11734827/1‑35 (MQ=255) aCCCCGCCAGATTTGACGTTGCTTTCATAACCGAt > 1:5421326/1‑35 (MQ=255) ccccGCCAGATTTGACGTTGCTTTCATAACCGATa > 1:15243019/1‑35 (MQ=255) cccGCCAGATTTGACGTTTCTTTCATAACCGATaa > 1:11698811/1‑35 (MQ=255) cccGCCAGATTTGACGTTGCTTTCATAACCGATaa > 1:20302827/1‑35 (MQ=255) cccGCCAGATTTGACGTTGCTTTCATAACCGATaa > 1:9525936/1‑35 (MQ=255) ccGCCAGATTTGACGTTGCTTTCATAACCGATAAt > 1:16165424/1‑35 (MQ=255) ccGCCAGATTTGACGTTGCTTTCATAACCGATAAt > 1:5482992/1‑35 (MQ=255) gCCAGATTTGACGTTGCTTTCATAACCGATAATCg > 1:16645434/1‑35 (MQ=255) gCCAGATTTGACGTTGCTTTCATAACCGATAATCg > 1:5379534/1‑35 (MQ=255) gCCAGATTTGACGTTGCTTTCATAACCGATAATCg > 1:6829737/1‑35 (MQ=255) ccAGATTTGACGTTGCTTTCATAACCGATAATCGa > 1:15800228/1‑35 (MQ=255) ccAGATTTGACGTTGCTTTCATAACCGATAATCGa > 1:17939325/1‑35 (MQ=255) cAGATTTGACGTTGCTTTGATAAACGATAATCGaa > 1:3091501/1‑35 (MQ=37) cAGATTTGACGTTGCTTTCATAACCGATAATCGaa > 1:19155489/1‑35 (MQ=255) aGATTTGACGTTGCTTTCATAACCGATAATCGAAc > 1:10343626/1‑35 (MQ=255) aGATTTGACGTTGCTTTCATAACCGATAATCGAAc > 1:3846966/1‑35 (MQ=255) aGATTTGACGTTGCTTTCATAACCGATAATCGAAc > 1:17512120/1‑35 (MQ=255) gATTTGACGTTGCTTTCATAACCGATAATCGAAcc > 1:19170837/1‑35 (MQ=255) gATTTGACGTTGCTTTCATAACCGATAATCGAAcc > 1:12654786/1‑35 (MQ=255) aTTTGACGTTGCTTTCATAACCGATAATCGAACCt > 1:17682675/1‑35 (MQ=255) aTTTGACGTTGCTTTCATAACCGATAATCGAACCt > 1:10316927/1‑35 (MQ=255) aTTTGACGTTGCTTTCATAACCGATAATCGAACCt > 1:3001487/1‑35 (MQ=255) aTTTGACGTTGCTTTCATAACCGATAATCGAACCt > 1:11340843/1‑35 (MQ=255) tttGACGTTGCTTTCATAACCGATAATCGAACCtt > 1:20365544/1‑35 (MQ=255) tttGACGTTGCTTTCATAACCGATAATCGAACCtt > 1:16056420/1‑35 (MQ=255) ttGACGTTGCTTTCATAACCGATAATCGAACCTTc > 1:2864643/1‑35 (MQ=255) ttGACGTTGCTTTCATAACCGATAATCGAACCTTc > 1:18121630/1‑35 (MQ=255) tGACGTTGCTTTCATAACCGATAATCGAACCTTCa > 1:2939569/1‑35 (MQ=255) tGACGTTGCTTTCATAACCGATAATCGAACCTCCa > 1:505749/1‑35 (MQ=255) gACGTTGCTTTCATAACCGATAATCGAACCTTCaa > 1:14658263/1‑35 (MQ=255) aCGTTGCTTTCATAACCGATAATCTAACCTTCAAc > 1:15793452/1‑35 (MQ=255) aCGTTGCTTTCATAACCGATAATCGAACCTTCAAc > 1:11661203/1‑35 (MQ=255) aCGTTGCTTTCATAACCGATAATCGAACCTTCAAc > 1:7811006/1‑35 (MQ=255) aCGTTGCTTTCATAACCGATAATCGAACCTTCAAc > 1:14540759/1‑35 (MQ=255) cGTTGCTTTCATAACCGATAATCGAACCTTCAAcc > 1:19705552/1‑35 (MQ=255) ttttttttattaaccgATAATCGAACCTTCAACCa < 1:8154830‑M2/19‑1 (MQ=255) gTTGCTTTCATAACCGATAATCGAACCTTCAACCa > 1:1311176/1‑35 (MQ=255) gTTGCTTTCATAACCGATAATCGAACCTTCAACCa > 1:8830524/1‑35 (MQ=255) gTTGCTTTCATAACCGATAATCGAACCTTCAACCa > 1:938599/1‑35 (MQ=255) ttGCTTTCATAACCGATAATCGAACCTTCAACCAt > 1:967252/1‑35 (MQ=255) tgttttattaaccgATAATCGAACCTTCAACCATg < 1:1042575‑M2/21‑1 (MQ=255) tGCTTTCATAACCGATAATCGAACCTTCAACCATg > 1:18281611/1‑35 (MQ=255) tttttTATAACCGATAATCGAACCTTCAACCATGa < 1:11151287/33‑1 (MQ=38) tcTTTAATAACCGATAATCGAACCTTCAACCATGa < 1:7932970/34‑1 (MQ=255) gttttAATACCCGATAATCGAACCTTCAACCATGa < 1:3887652/33‑1 (MQ=37) gCTTTCATAACCGATAATCGAACCTTCAACCATGa > 1:10123960/1‑35 (MQ=255) gCTTTCATAACCGATAATCGAACCTTCAACCATGa > 1:16692534/1‑35 (MQ=255) gCTTTCATAACCGATAATCGAACCTTCAACCATGa > 1:11004290/1‑35 (MQ=255) ttttattacccgATAATCGAACCTTCAACCATGat < 1:4410517‑M2/23‑1 (MQ=255) cTTTCATAACCGATAATCGAACCTTCAACCATGat > 1:13578512/1‑35 (MQ=255) ttttttaaccgATAATCGAACCTTCAACCATGata < 1:10364598‑M2/24‑1 (MQ=255) tttCATAACCGATAATCGAACCTTCAACCATGata > 1:16716862/1‑35 (MQ=255) tttCATAACCGATAATCGAACCTTCAACCATGata > 1:2685426/1‑35 (MQ=255) tttAATACCCGATAATCGAACCTTCAACCATGata < 1:12992821/35‑1 (MQ=38) ttattacccgATAATCGAACCTTCAACCATGatat < 1:7347313‑M2/25‑1 (MQ=255) ttaTAACCGATAATCGAACCTTCAACCATGATAtt < 1:11613548/33‑1 (MQ=255) tattacccgATAATCGAACCTTCAACCATGATAtt < 1:12576869‑M2/26‑1 (MQ=255) tCATAACCGATAATCGAACCTTCAACCATGATAtt > 1:1958994/1‑35 (MQ=255) tttacccgATAATCGAACCTTCAACCATGATAttt < 1:16650938‑M2/27‑1 (MQ=255) aTACCCGATAATCGAACCTTCAACCATGATATTTg < 1:20145864/35‑1 (MQ=255) aTAACCGATAATCGAACCTTCAACCATGATATTTg < 1:7298084/35‑1 (MQ=255) aTAACCGATAATCGAACCTTCAACCATGATATTTg > 1:8689694/1‑35 (MQ=255) tacccgATAATCGAACCTTCAACCATGATATTTgc < 1:9138567‑M2/29‑1 (MQ=255) taaccgATAATCGAACCTTCAACCATGATATTTgc > 1:15322215‑M2/7‑35 (MQ=255) aacccgATAATCGAACCTTCAACCATGATATTTgc < 1:1334634‑M2/29‑1 (MQ=255) acccgATAATCGAACCTTCAACCATGATATTTgcc < 1:10563753‑M2/30‑1 (MQ=255) acccgATAATCGAACCTTCAACCATGATATTTgcc < 1:15023743‑M2/30‑1 (MQ=255) aaccgATAATCGAACCTTCAACCATGATATTTgcc > 1:14558672‑M2/6‑35 (MQ=255) aaccgATAATCGAACCTTCAACCATGATATTTgcc > 1:8854644‑M2/6‑35 (MQ=255) aaccgATAATCGAACCTTCAACCATGATATTTgcc > 1:10990672‑M2/6‑35 (MQ=255) cccgATAATCGAACCTTCAACCATGATATTTgccg < 1:19909414‑M2/31‑1 (MQ=255) cccgATAATCGAACCTTCAACCATGATATTTgccg < 1:16377686‑M2/31‑1 (MQ=255) accgATAATCGAACCTTCAACCATGATATTTgccg > 1:8005977‑M2/5‑35 (MQ=255) accgATAATCGAACCTTCAACCATGATATTTgccg > 1:9491175‑M2/5‑35 (MQ=255) accgATAATCGAACCTTCAACCATGATATTTgccg > 1:12459575‑M2/5‑35 (MQ=255) accgATAATCGAACCTTCAACCATGATATTTgccg > 1:2457518‑M2/5‑35 (MQ=255) ccgATAATCGAACCTTCAACCATGATATTTgccgc > 1:8011588‑M2/4‑35 (MQ=255) ccgATAATCGAACCTTCAACCATGATATTTgccgc < 1:18107064‑M2/32‑1 (MQ=255) ccgATAATCGAACCTTCAACCATGATATTTgccgc > 1:7119290‑M2/4‑35 (MQ=255) ccgATAATCGAACCTTCAACCATGATATTTgccgc < 1:9204716‑M2/32‑1 (MQ=255) ctaTAATCGAACCTTCAACCATGATATTTgccgcc > 1:728146/3‑35 (MQ=255) cgATAATCGAACCTTCAACCATGATATTTgccgcc > 1:11327226‑M2/3‑35 (MQ=255) cgATAATCGAACCTTCAACCATGATATTTgccgcc > 1:12094488‑M2/3‑35 (MQ=255) cgATAATCGAACCTTCAACCATGATATTTgccgcc > 1:12578887‑M2/3‑35 (MQ=255) cgATAATCGAACCTTCAACCATGATATTTgccgcc < 1:20436379‑M2/33‑1 (MQ=255) cgATAATCGAACCTTCAACCATGATATTTgccgcc > 1:20313118‑M2/3‑35 (MQ=255) cgATAATCGAACCTTCAACCATGATATTTgccgcc > 1:19333584‑M2/3‑35 (MQ=255) gATAATCGAACCTTCAACCATGATATTTGccgccg > 1:7290782‑M2/2‑35 (MQ=255) gATAATCGAACCTTCAACCATGATATTTGccgccg > 1:7270096‑M2/2‑35 (MQ=255) gATAATCGAACCTTCAACCATGATATTTGccgccg > 1:18387387‑M2/2‑35 (MQ=255) gATAATCGAACCTTCAACCATGATATTTGccgccg > 1:14396925‑M2/2‑35 (MQ=255) gATAATCGAACCTTCAACCATGATATTTGccgccg > 1:20139421‑M2/2‑35 (MQ=255) gATAATCGAACCTTCAACCATGATATTTGccgccg > 1:9539325‑M2/2‑35 (MQ=255) aTAATCGAACCTTCAACCATGATATTTGCCGCCGt > 1:6146291/1‑35 (MQ=255) aTAATCGAACCTTCAACCATGATATTTGCCGCCGt > 1:6140117/1‑35 (MQ=255) aTAATCGAACCTTCAACCATGATATTTGCCGCCGt > 1:2084291/1‑35 (MQ=255) aTAATCGAACCTTCAACCATGATATTTGCCGCCGt > 1:1396619/1‑35 (MQ=255) | AACCCCGCCAGATTTGACGTTGCTTTCATAACCGATAATCGAACCTTCAACCATGATATTTGCCGCCGT > REL606/1115792‑1115860 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |