New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 225795 = | 119 (1.160) | 11 (0.130) | 3/40 | NT | 13.7% | coding (123/573 nt) | gmhB | hypothetical protein |
? | REL606 | 2126049 = | 40 (0.470) | coding (187/1041 nt) | gatD | galactitol‑1‑phosphate dehydrogenase, Zn‑dependent and NAD(P)‑binding |
TGGTTACTACCACCAGCGCAAACCCCATTTTTTTTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/225832‑225795 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagcCGCTAAATTCATGGCCTAACGTTATTGGATAATA > REL606/2126049‑2126082 TGGTTACTACCACCAGCGCAAACCCCATTTTTTTT > 1:3426349/1‑35 TGGTTACTACCACCAGCGCAAACCCCATTTTTTTT > 1:1935798/1‑35 TGGTTACTACCACCAGCGCAAACCCCATTTTTTTT > 1:13390709/1‑35 tGTTACTACCACCAGCGCAAACCCCATTTTTTTTA > 1:6988985/2‑35 GGTTACTCCCACCAGCGCAAACCCCATTTTTTTTA < 1:14604348/35‑1 GGTTACTCCCACCAGCGCAAACCCCATTTTTTTTA < 1:10550451/35‑1 GGTTACTCCCACCAGCGCAAACCCCATTTTTTTTA < 1:7647869/35‑1 GGTTACTACCACCAGCGCAAACCCCATTTTTTTTA > 1:15848330/1‑35 GGTTACTACCACCAGCGCAAACCCCATTTTTTTTA > 1:13557691/1‑35 GGTTACTACCACCAGCGCAAACCCCATTTTTTTTA > 1:4808384/1‑35 GGTTACTACCACCAGCGCAAACCCCATTTTTTTTA > 1:4625626/1‑35 GGTTACTACAACCAGCGCAAACCCCATTTTTTTTA < 1:10341587/35‑1 GTTACTCCCACCAGCGCAAACCCCATTTTTTTTAG < 1:8890566/35‑1 GTTACTACCACCAGCGCAAACCCCATTTTTTTTAG > 1:11057422/1‑35 ttcCTACCACCAGCGCAAACCCCATTTTTTTTAGC < 1:6685738/32‑1 TTACTCCCACCAGCGCAAACCCCATTTTTTTTAGC < 1:1661832/35‑1 TTACTACCACCAGCGCAAACCCCATTTTTTTTAGC > 1:3690584/1‑35 TTACTACCACCAGCGCAAACCCCATTTTTTTTAGC > 1:15298598/1‑35 CTACCACCAGCGCAAACCCCATTTTTTTTAGCCcg > 1:13195316/1‑33 cttATTTTTTTTAGCCGCTAAATTCATGGCCTAAC < 1:2766737/32‑1 CCCATTTTTTTTAGCCGCTAAATTCATGGCCTAAC < 1:2129625/35‑1 tctTTTTTTTTAGCCGCTAAATTCATGGCCTAACG < 1:18420847/32‑1 ctATTTTTTTTAGCCGCTAAATTCATGGCCTAACG < 1:11136093/33‑1 catTTTTTTTTAGCCGCTAAATTCATGGCCTAACG < 1:10886374/32‑1 gATTTTTTTTAGCCGCTAAATTCATGGCCTAACGT < 1:2460108/34‑1 acaTTTTTTTAGCCGCTAAATTCATGGCCTAACGT < 1:4233539/32‑1 tTTTTTTTTAGCCGCTAAATTCATGGCCTAACGTT < 1:9325104/34‑1 ataTTTTTAGCCGCTAAATTCATGGCCTAACGTTA < 1:15862848/32‑1 TTTTTTTTAGCCGCTAAATTCATGGCCTAACGTTA < 1:4949527/35‑1 TTTTTTTTAGCCGCTAAATTCATGGCCTAACGTTA < 1:6330035/35‑1 TTTTTTTAGCCGCTAAATTCATGGCCTAACGTTAT < 1:9611712/35‑1 aTTTTAGCCGCTAAATTCATGGCCTAACGTTATTG < 1:12308943/34‑1 TTTTTAGCCGCTAAATTCATGGCCTAACGTTATTG < 1:471850/35‑1 TTTTTAGCCGCTAAATTCATGGCCTAACGTTATTG < 1:4017316/35‑1 TTTTTAGCCGCTAAATTCATGGCCTAACGTTATTG < 1:2783275/35‑1 TTTTTAGCCGCTAAATTCATGGCCTAACGTTATTG < 1:10008518/35‑1 TTTTTAGCCGCTAAATTCATGGCCTAACGTTATTG < 1:15903737/35‑1 TTTTAGCCGCTAAATTCATGGCCTAACGTTATTGG < 1:3849649/35‑1 TTTTAGCCGCTAAATTCATGGCCTAACGTTATTGG < 1:17056460/35‑1 TTTAGCCGCTAAATTCATGGCCTAACGTTATTGGA < 1:9061578/35‑1 TTTAGCCGCTAAATTCATGGCCTAACGTTATTGGA < 1:1335933/35‑1 TTAGCCGCTAAATTCATGGCCTAACGTTATTGGAT < 1:18142902/35‑1 TTAGCCGCTAAATTCATGGCCTAACGTTATTGGAT < 1:10118338/35‑1 TTACCCGCTAAATTCATGGCCTAACGTTATTGGAT < 1:8364050/35‑1 TAGCCGCTAAATTCATGGCCTAACGTTATTGGATA < 1:13497523/35‑1 TAGCCGCTAAATTCATGGCCTAACGTTATTGGATA > 1:11297583/1‑35 TAGCCGCTAAATTCATGGCCTAACGTTATTGGATA > 1:7681657/1‑35 TAGCCGCTAAATTCATGGCCTAACGTTATTGGATA > 1:7792099/1‑35 AGCCGCTAAATTCATGGCCTAACGTTATTGGATAA > 1:9802947/1‑35 AGCCGCTAAATTCATGGCCTAACGTTATTGGATAA < 1:1641078/35‑1 AGCCGCTAAATTCATGGCCTAACGTTATTGGATAA > 1:3729528/1‑35 GCCGCTAAATTCATGGCCTAACGTTATTGGATAAT > 1:7874243/1‑35 GCCGCTAAATTCATGGCCTAACGTTATTGGATAAT < 1:17589487/35‑1 GCCGCTAAATTCATGGCCTAACGTTATTGGATAAT < 1:9481012/35‑1 CCGCTAAATTCATGGCCTAACGTTATTGGATAATA < 1:7972838/35‑1 CCGCTAAATTCATGGCCTAACGTTATTGGATAATA < 1:13137163/35‑1 CCGCTAAATTCATGGCCTAACGTTATTGGATAATA > 1:19760698/1‑35 TGGTTACTACCACCAGCGCAAACCCCATTTTTTTTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/225832‑225795 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagcCGCTAAATTCATGGCCTAACGTTATTGGATAATA > REL606/2126049‑2126082 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |