New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1686611 | 82 (0.800) | 12 (0.120) | 3/48 | NT | 15.0% | coding (276/1059 nt) | rnfD | electron transport complex protein RnfD |
? | REL606 | = 4059472 | 54 (0.530) | coding (536/636 nt) | fdoI | formate dehydrogenase‑O, cytochrome b556 subunit |
Only 100 of 116 total aligned reads displayed.
CCAGGCGCTGGTAACCCATCCTTCCACCATGGCGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTAGATA > REL606/4059438‑4059507 | ccAGGCGCTGGTAACCCATCCTTCCACCATGGCgg < 1:4715842/35‑1 (MQ=255) ccAGGCGCTGGTAACCCATCCTTCCACAATGGCgg < 1:9136558/35‑1 (MQ=255) cAGGCGCTGGTAACCCATCCTTCCACCATGGCGGt < 1:12914069/35‑1 (MQ=255) cAGGCGCTGGTAACCCATCCTTCCACCATGGCGGt < 1:11400730/35‑1 (MQ=255) cAGGCGCTGGTAACCCATCCTTCCACCATGGCGGg < 1:5382235‑M2/35‑2 (MQ=255) cAGGCGCTGGTAACCCATCCTTCCACCATGGCGGg < 1:12438664‑M2/35‑2 (MQ=255) aGGCGCTGGTAACCCATCCTTCCACCATGGCGGgg < 1:4587988‑M2/35‑3 (MQ=255) aGGCGCTGGTAACCCATCCTTCCACCATGGCGGTa < 1:3058798/35‑1 (MQ=255) ggCGCTGGTAACCCATCCTTCCACCATGGCGGgtg < 1:18879660‑M2/35‑4 (MQ=255) ggCGCTGGTAACCCATCCTTCCACCATGGCGGgag < 1:4174932‑M2/35‑4 (MQ=255) ggCGCTGGTAACCCATCCTTCCACCATGGCGGTaa < 1:8295038/35‑1 (MQ=255) ggCGCTGGTAACCCATCCTTCCACCATGGCGGTaa < 1:12568768/35‑1 (MQ=255) ggCCCTGGTAACCCATACTTCCACCATGGCGGTaa < 1:18001653/35‑1 (MQ=38) gcgcTGGTAACCCATCCTTCCACCATGGCGGgggg < 1:17377378‑M2/35‑5 (MQ=255) gcgcTGGTAACCCATCCTTCCACCATGGCGGggag < 1:20496468‑M2/35‑5 (MQ=255) cgcTGGTAACCCATCCTTCCACCATGGCGGggggg < 1:11453688‑M2/35‑6 (MQ=255) cgcTGGTAACCCATCCTTCCACCATGGCGGggggg < 1:7236858‑M2/35‑6 (MQ=255) cgcTGGTAACCCATCCTTCCACCATGGCGGggggg < 1:15537221‑M2/35‑6 (MQ=255) cgcTGGTAACCCATCCTTCCACCATGGCGGTAATc < 1:1325243/35‑1 (MQ=255) cgcTGGTAACCCATCCTTCCACCATGGCGGTAATc < 1:9036715/35‑1 (MQ=255) cgcTGGTAACCCATCCTTCCACCATGGCGGTAATc < 1:10056037/35‑1 (MQ=255) gcTGGTAACCCATCCTTCCACCATGGCGGgggggg < 1:633570‑M2/35‑7 (MQ=255) gcTGGTAACCCATCCTTCCACCATGGCGGgggggg < 1:1263025‑M2/35‑7 (MQ=255) gcTGGTAACCCATCCTTCCACCATGGCGGTAATCg < 1:1517555/35‑1 (MQ=255) cTGGTAACCCATCCTTCCACCATGGCGGggggggg < 1:5441170‑M2/35‑8 (MQ=255) cTGGTAACCCATCCTTCCACCATGGCGGggggggg < 1:16028348‑M2/35‑8 (MQ=255) cTGGTAACCCATCCTTCCACCATGGCGGggggggg < 1:3206622‑M2/35‑8 (MQ=255) cTGGTAACCCATCCTTCCACCATGGCGGTAATCGt < 1:25933/35‑1 (MQ=255) cTGGTAACCCATCCTTCCACCATGGCGGTAATCGt < 1:4502921/35‑1 (MQ=255) cTGGTAACCCATCCTTCCACCATGGCGGTAATCGt < 1:14298780/35‑1 (MQ=255) cTGGTAACCCATCCTTCCACCATGGCGGTAATCGt < 1:7272721/35‑1 (MQ=255) tGGTAACCCATCCTTCCACCATGGCGGgggggggg < 1:3705047‑M2/35‑9 (MQ=255) tGGTAACCCATCCTTCCACCATGGCGGgggggggg < 1:8312670‑M2/35‑9 (MQ=255) tGGTAACCCATCCTTCCACCATGGCGGgggggggg < 1:2123004‑M2/35‑9 (MQ=255) tGGTAACCCATCCTTCCACCATGGCGGgggggggg < 1:12379775‑M2/35‑9 (MQ=255) tGGTAACCCATCCTTCCACCATGGCGGgaggggcg < 1:10110480‑M2/35‑9 (MQ=255) tGGTAACCCATCCTTCCACCATGGCGGTAATCGTg < 1:14849037/35‑1 (MQ=255) ggTAACCCATCCTTCCACCATGGCGGTAATCGTGc < 1:11134547/35‑1 (MQ=255) ggTAACCCATCCTTCCACCATCGCGGTAATCGTGc > 1:15998585/1‑35 (MQ=255) taCCCATCCTTCCACCATGGCGGTAATCGTGCCtt < 1:10376022/34‑1 (MQ=255) aaCCCATCCTTCCACCATGGCGGTAATCGTGCCtt < 1:2502383/35‑1 (MQ=255) aCCCATCCTTCCACCATGGCGGTAATCGTGCCttt < 1:8671901/35‑1 (MQ=255) aCCCATCCTTCCACCATGGCGGTAATAGTGCCttt < 1:9531133/35‑1 (MQ=255) aCCAATCCTTCCACCATGGCGGTAATCGTGCCttt < 1:12173413/35‑1 (MQ=255) cccATCCTTCCACCATGGCGGTAATCGTGCCTTTc < 1:2540663/35‑1 (MQ=255) ccATCCTTCCACCATGGCGGTAATCGTGCCTTTCa < 1:12631361/35‑1 (MQ=255) ccATCCTTCCACCATGGCGGTAATCGTGCCTTTCa < 1:2596593/35‑1 (MQ=255) cATCCTTCCACCATGGCGGTAATCGTGCCTTTCAc < 1:15162185/35‑1 (MQ=255) cATCCGTCCACCATGGCGGTAATCGTGCCTTTCAc < 1:1288866/35‑1 (MQ=255) aTCCTTCCACCATGGCGGTAATCGTGCCTTTCAcc < 1:10258771/35‑1 (MQ=255) aTCCTTCCACCATGGCGGTAATCGTGCATTTCAcc < 1:13536102/35‑1 (MQ=255) aTCCTTCAACCATGGCGGTAATCGTGCCTTTCAcc < 1:14401699/35‑1 (MQ=255) tCCTTCCACCATGGCGGTAATCGTGCCTTTCAccc < 1:5989702/35‑1 (MQ=255) tCCTTCCACCATGGCGGTAATCGTGCCTTTCAccc < 1:5146876/35‑1 (MQ=255) ccTTCCACCATGGCGGTAATCGTGCCTTTCACCCa < 1:3610025/35‑1 (MQ=255) ccTTCCACCATCGCGGTAATCGTGCCTTTCACCCa > 1:7514530/1‑35 (MQ=255) cTTCCACCATGGCGGTAATCGTGCCTTTCACCCaa < 1:5138664/35‑1 (MQ=255) cTTCCACCATGGCGGTAATCGTGCCTTTCACCCaa < 1:14548468/35‑1 (MQ=255) cTTCCACCATGGCGGTAATCGTGCCTTTCACCCaa < 1:3255797/35‑1 (MQ=255) ttCCACCATGGCGGTAATCGTGCCTTTCACCCaaa < 1:9198863/35‑1 (MQ=255) ttCCACCATGGCGGTAATCGTGCCTTTCACCCaaa < 1:7321599/35‑1 (MQ=255) ttCCACCATGGCGGTAATCGTGCCTTTCACCCaaa < 1:8136764/35‑1 (MQ=255) ttCCACCATGGCGGTAATCGTGCCTTTCACCCaaa < 1:14303392/35‑1 (MQ=255) tCCACCATGGCGGTAATCGTGCCTTTCACCCAAAg < 1:7738/35‑1 (MQ=255) tCCACCATGGCGGTAATCGTGCCTTTCACCCAAAg < 1:3816023/35‑1 (MQ=255) ccaccaTGGCGGTAATCGTGCCTTTCACCCAAAgg < 1:4617903/35‑1 (MQ=255) ccaccaTGGCGGTAATCGTGCCTTTCACCCAAAgg < 1:8943443/35‑1 (MQ=255) ccaccaTGGCGGTAATCGTGCCTTTCACCCAAAgg < 1:5379256/35‑1 (MQ=255) ccaccaTGGCGGTAATCGTGCCTTTCACCCAAAgg < 1:20438455/35‑1 (MQ=255) caccaTGGCGGTAATCGTGCCTTTCACCCAAAggg < 1:7957328/35‑1 (MQ=255) caccaTGGCGGTAATCGTGCCTTTCACCCAAAggg < 1:18810946/35‑1 (MQ=255) accaTGGCGGTAATCGTGCCTTTCACCCAAAGggc < 1:7509003/35‑1 (MQ=255) aTGGCGGTAATCGTGCCTTTCACCCAAAGggcggc < 1:2878746/35‑1 (MQ=255) aTGGCGGTAATCGTGCCTTTCACCCAAAGggcggc < 1:495157/35‑1 (MQ=255) aTGGCGGTAATCGTGCCTTTCACCCAAAGggcggc < 1:7532370/35‑1 (MQ=255) tGGCGGTAATCGTGCCTTTCACCCAAAGGgcggcg < 1:11966616/35‑1 (MQ=255) tGGCGGTAATCGTGCCTTTCACCCAAAGGgcggcg < 1:7270903/35‑1 (MQ=255) tGGCGGTAATCGTGCCTTTCACCCAAAGGgcggcg < 1:10199712/35‑1 (MQ=255) tGGCGGTAATCGTGCCTTTCACCCAAAGGgcggcg < 1:1798257/35‑1 (MQ=255) ggCGGTAATCGTGCCTTTCACCCAAAGGGCGGCGt < 1:12310542/35‑1 (MQ=255) ggCGGTAATCGTGCCTTTCACCCAAAGGGCGGCGt < 1:11062752/35‑1 (MQ=255) gCGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTa > 1:20532688/1‑35 (MQ=255) gCGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTa < 1:13008489/35‑1 (MQ=255) gCGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTa < 1:2294035/35‑1 (MQ=255) gCGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTa > 1:4695977/1‑35 (MQ=255) gCGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTa < 1:2389916/35‑1 (MQ=255) gCGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTa < 1:16282893/35‑1 (MQ=255) cGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTAg < 1:19173096/35‑1 (MQ=255) cGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTAg > 1:1727358/1‑35 (MQ=255) cGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTAg > 1:17149909/1‑35 (MQ=255) cGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTAg > 1:6197851/1‑35 (MQ=255) cGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTAg > 1:6981157/1‑35 (MQ=255) cGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTAg < 1:6922703/35‑1 (MQ=255) ggTAATCGTGCCTTTCACCCAAAGGGCGGCGTAGa > 1:8819688/1‑35 (MQ=255) ggTAATCGTGCCTTTCACCCAAAGGGCGGCGTAGa < 1:20108352/35‑1 (MQ=255) ggTAATCGTGCCTTTCACCCAAAGGGCGGCGTAGa < 1:6654876/35‑1 (MQ=255) gTAATCGTGCCTTTCACCCAAAGGGCGGCGTAGat > 1:4681958/1‑35 (MQ=255) gTAATCGTGCCTTTCACCCAAAGGGCGGCGTAGat < 1:10688330/35‑1 (MQ=255) gTAATCGTGCCTTTCACCCAAAGGGCGGCGTAGat < 1:10399741/35‑1 (MQ=255) gTAATCGTGCCTTTCA‑CCAAAGGGCGGCGTAGata < 1:13364689/35‑1 (MQ=25) | CCAGGCGCTGGTAACCCATCCTTCCACCATGGCGGTAATCGTGCCTTTCACCCAAAGGGCGGCGTAGATA > REL606/4059438‑4059507 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |