Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,015,771 | IS150 (–) +3 bp | 97.6% | coding (1192‑1194/1677 nt) | ECB_02816 → | KpsD protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2775877 | NA (NA) | 109 (1.160) | 37/44 | NT | 97.9% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 3015771 = | 2 (0.020) | coding (1192/1677 nt) | ECB_02816 | KpsD protein | |||||
* | ? | REL606 | = 3015773 | 3 (0.040) | 97 (0.980) | 40/46 | NT | 96.6% | coding (1194/1677 nt) | ECB_02816 | KpsD protein |
? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 308 total aligned reads displayed.
GAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAG > REL606/3015737‑3015805 | gAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCAc < 1:18869849/35‑1 (MQ=255) gAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCAc < 1:2246633/35‑1 (MQ=255) aTCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACtt < 1:1934452/35‑1 (MQ=255) aTCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACtt > 1:512730/1‑35 (MQ=255) aTCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACtt < 1:17089884/35‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaCTTTc > 1:10585671‑M2/31‑35 (MQ=255) tcatcgtccaacaagatgggtgcagtacaCTTTCt > 1:8237403‑M2/30‑35 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaCTTTCt > 1:12178769‑M2/30‑35 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaCTTTCt < 1:9103824‑M2/6‑1 (MQ=255) catcgtccaacaaaatgggtgcagtacaCTTTCTg < 1:20125633‑M2/7‑1 (MQ=255) catcgtccaacaaaatgggtgcagtacaCTTTCTg < 1:19019247‑M2/7‑1 (MQ=255) catcgtccaacaaaatgggtgcagtacaCTTTCTg > 1:8322173‑M2/29‑35 (MQ=255) catcgtccaacaaaatgggtgcagtacaCTTTCTg > 1:8960367‑M2/29‑35 (MQ=255) catcgtccaacaaaatgggtgcagtacaCTTTCTg < 1:12350698‑M2/7‑1 (MQ=255) catcgtccaacaaaatgggtgcagtacaCTCTctt < 1:10129657‑M2/7‑2 (MQ=255) tcGCTGCAAAAGCTGGAGGAAGCCTCACTTtgtac > 1:17982405‑M1/1‑30 (MQ=255) tcGCTGCAAAAGCTGGAGGAAGCCTCACTTtgtac < 1:3346154‑M1/35‑6 (MQ=255) atcgtccaacaaaatgggtgcagtacaCTTTCTGc > 1:18142849‑M2/28‑35 (MQ=255) tcgtccaacaaaatgggtgcagtacaCTTTCTGcc < 1:20611137‑M2/9‑1 (MQ=255) cGCTGCAAAAGCTGGAGGAAGCCTCACTTtgtact < 1:10612558‑M1/35‑7 (MQ=255) cGCTGCAAAAGCTGGAGGAAGCCTCACTTtgtact < 1:12609396‑M1/35‑7 (MQ=255) cGCTGCAAAAGCTGGAGGAAGCCTCACTTtgtact < 1:9338198‑M1/35‑7 (MQ=255) gCTGCAAAAGCTGGAGGAAGCCTCACTTtgtactg < 1:13367379‑M1/35‑8 (MQ=255) cgtccaacaaaatgggtgcagtacaCTTTCTGccc > 1:14605376‑M2/26‑35 (MQ=255) tccaacaaaatgggtgcagtacaCTTTCTGCCCAg < 1:11039746‑M2/12‑1 (MQ=255) tGCAAAAGCTGGAGGAAGCCTCACTTtgtactgac > 1:2810173‑M1/1‑26 (MQ=255) tGCAAAAGCTGGAGGAAGCCTCACTTtgtactgac < 1:7783829‑M1/35‑10 (MQ=255) gCAAAAGCTGGAGGAAGCCTCACTTtgtactgacc < 1:15532594‑M1/35‑11 (MQ=255) gCAAAAGCTGGAGGAAGCCTCACTTtgtactgacc > 1:11668331‑M1/1‑25 (MQ=255) caacaaaatgggtgcagtacaCTTTCTGCCCAGTc < 1:10430561‑M2/14‑1 (MQ=255) cAAAAGCTGGAGGAAGCCTCACTTtgtactgaccc > 1:12931173‑M1/1‑24 (MQ=255) cAAAAGCTGGAGGAAGCCTCACTTtgtactgaccc > 1:5352437‑M1/1‑24 (MQ=255) cAAAAGCTGGAGGAAGCCTCACTTtgtactgaccc > 1:11189305‑M1/1‑24 (MQ=255) cAAAAGCTGGAGGAAGCCTCACTTtgtactgaccc > 1:17540841‑M1/1‑24 (MQ=255) aacaaaatgggtgcagtacaCTTTCTGCCCAGTCa > 1:7545592‑M2/21‑35 (MQ=255) aaaaGCTGGAGGAAGCCTCACTTtgtactgacccc < 1:12251268‑M1/35‑13 (MQ=255) aaaaGCTGGAGGAAGCCTCACTTtgtactgacccc < 1:4499658‑M1/35‑13 (MQ=255) acaaaatgggtgcagtacaCTTTCTGCCCAGTCAt > 1:19286715‑M2/20‑35 (MQ=255) aaaGCTGGAGGAAGCCTCACTTtgtactgacccca < 1:621475‑M1/35‑14 (MQ=255) aaaGCTGGAGGAAGCCTCACTTtgtactgacccca < 1:5961968‑M1/35‑14 (MQ=255) aaaGCTGGAGGAAGCCTCACTTtgtactgacccca > 1:20249177‑M1/1‑22 (MQ=255) aaaGCGGGAGGAAGCCTCACTTtgtactgacccca < 1:20401881‑M1/35‑14 (MQ=255) caaaatgggtgcagtacaCTTTCTGCCCAGTCATc < 1:6658111‑M2/17‑1 (MQ=255) aaGCTGGAGGAAGCCTCACTTtgtactgaccccaa < 1:19489234‑M1/35‑15 (MQ=255) aaaatgtgtgcagtacaCTTTCTGCCCAGTCATcc > 1:15094267‑M2/18‑35 (MQ=255) aaaatgggtgcagtacaCTTTCTGCCCAGTCATcc < 1:13671114‑M2/18‑1 (MQ=255) aaaatgggtgcagtacaCTTTCTGCCCAGTCATcc < 1:5710199‑M2/18‑1 (MQ=255) aaaatgggtgcagtacaCTTTCTGCCCAGTCATcc > 1:9695032‑M2/18‑35 (MQ=255) aaaatgggtgcagtacaCTTTCTGCCCAGTCATcc > 1:14968577‑M2/18‑35 (MQ=255) aaaatgggtgcagtacaCTTTCTGCACAGTCATcc < 1:7277826‑M2/18‑1 (MQ=255) aaaatgggtgcagtacaCTTTCTGCACAGTCATcc < 1:383443‑M2/18‑1 (MQ=255) aGCTGGAGGAAGCCTCACTTtgtactgaccccaaa < 1:17429807‑M1/35‑16 (MQ=255) gCTGGAGGAAGCCTCACTTtgtactgaccccaaaa < 1:12468061‑M1/35‑17 (MQ=255) gCTGGAGGAAGCCTCACTTtgtactgaccccaaaa > 1:17809497‑M1/1‑19 (MQ=255) aaatgggtgcagtacaCTTTCTGCCCAGTCATcca < 1:19625677‑M2/19‑1 (MQ=255) gatgggtgcagtacaCTTTCTGCCCAGTCATccac < 1:163360‑M2/20‑1 (MQ=255) cTGGAGGAAGCCTCACTTtgtactgaccccaaaaa < 1:16849819‑M1/35‑18 (MQ=255) cTGGAGGAAGCCTCACTTtgtactgaccccaaaaa > 1:19997188‑M1/1‑18 (MQ=255) aattggtgcagtacaCTTTCTGCCCAGTCATccac > 1:7176387‑M2/16‑35 (MQ=255) aatgggtgcagtacaCTTTCTGCCCAGTCATccac > 1:6693452‑M2/16‑35 (MQ=255) tGGAGGAAGCCTCACTTtgtactgaccccaaaaag > 1:4751912‑M1/1‑17 (MQ=255) tgggtgcagtacaCTTTCTGCCCAGTCATccacca > 1:18611485‑M2/14‑35 (MQ=255) tgggtgcagtacaCTTTCTGCCCAGTCATccacca > 1:11417250‑M2/14‑35 (MQ=255) gggtgcagtacaCTTTCTGCCCAGTCATCCACCaa > 1:9573095‑M2/13‑35 (MQ=255) ggtgcagtacaCTTTCTGCCCAGTCATCCACCaaa < 1:7319094‑M2/24‑1 (MQ=255) ggtgcagtacaCTTTCTGCCCAGTCATCCACCaaa > 1:2351296‑M2/12‑35 (MQ=255) ggtgcagtacaCTTTCTGCCCAGTCATCCACCaaa > 1:16040514‑M2/12‑35 (MQ=255) ggtgcagtacaCTTTCTGCCCAGTCATCCACCaaa > 1:10977020‑M2/12‑35 (MQ=255) gaAGCCTCACTTtgtactgaccccaaaaagttgga > 1:9969419‑M1/1‑12 (MQ=255) gcagtacaCTTTCTGCCCAGTCATCCACCAaagaa > 1:2393980‑M2/9‑35 (MQ=255) aaGCCTCACTTtgtactgaccccaaaaagttggac < 1:1284857‑M1/35‑25 (MQ=255) aaGCCTCACTTtgtactgaccccaaaaagttggac < 1:14048265‑M1/35‑25 (MQ=255) cagtacaCTTTCTGCCCAGTCATCCACCAaagaag > 1:17722129‑M2/8‑35 (MQ=255) cagtacaCTTTCTGCCCAGTCATCCACCAaagaag > 1:20451152‑M2/8‑35 (MQ=255) aGCCTCACTTtgtactgaccccaaaaagttggaca < 1:9754955‑M1/35‑26 (MQ=255) aGCCTCACTTTCTGCCCAGTCATCCACCAaagaag > 1:4030529/1‑35 (MQ=255) gcatcacTTtgtactgaccccaaaaagttggacag < 1:16596857‑M1/32‑27 (MQ=255) gtacaCTTTCTGCCCAGTCATCCACCAaagaagaa > 1:311293‑M2/6‑35 (MQ=255) gtacaCTTTCTGCCCAGTCATCCACCAaagaagaa < 1:6923071‑M2/30‑1 (MQ=255) tacaCTTTCTGCCCAGTCATCCACCAaagaagaag > 1:1562547‑M2/5‑35 (MQ=255) tacaCTTTCTGCCCAGTCATCCACCAaagaagaag > 1:6322809‑M2/5‑35 (MQ=255) nacaCTTTCTGCCCAGTCATCCACCAaagaagaag > 1:18451743‑M2/5‑35 (MQ=255) cTCACTTtgtactgaccccaaaaagttggacagtt < 1:17325662‑M1/35‑29 (MQ=255) cTCACTTtgtactgaccccaaaaagttggacagtt > 1:13160530‑M1/1‑7 (MQ=255) acaCTTTCTGCCCAGTCATCCACCAAAGAAGAAGc < 1:18973625‑M2/32‑1 (MQ=255) acaCTTTCTGCCCAGTCATCCACCAAAGAAGAAGc < 1:8743355‑M2/32‑1 (MQ=255) caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGcc > 1:8836653‑M2/3‑35 (MQ=255) caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGcc > 1:4622795‑M2/3‑35 (MQ=255) cACTTtgtacttaccccaaaaagttggacagttaa > 1:13848976‑M1/1‑5 (MQ=255) cACTTtgtactgaccccaaaaagttggacagttaa < 1:3720998‑M1/35‑31 (MQ=255) cACTTtgtactgaccccaaaaagttggacagttaa < 1:4202828‑M1/35‑31 (MQ=255) ccTTTCTGCCCAGTCATCCACAAAAGAAGAagcca < 1:19849577/34‑1 (MQ=255) aCTTtgtactgaccccaaaaagttggacagttaaa > 1:7884569‑M1/1‑4 (MQ=255) aCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCa > 1:15919065‑M2/2‑35 (MQ=255) cTTtgtactgaccccaaaaagttggacagttaaac > 1:18550631‑M1/1‑3 (MQ=255) cTTtgtactgaccccaaaaagttggacagttaaac < 1:643702‑M1/35‑33 (MQ=255) cTTtgtactgaccccaaaaagttggacagttaaac < 1:5562958‑M1/35‑33 (MQ=255) cTTtgtactgaccccaaaaagttggacagttaaac > 1:9221751‑M1/1‑3 (MQ=255) cTTTCTGCCCAGTCATCCACCAAAGAAGAagccag > 1:4864385/1‑35 (MQ=255) cTTTCTGCCCAGTCATCCACCAAAGAAGAagccag < 1:10833767/35‑1 (MQ=255) | GAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAG > REL606/3015737‑3015805 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |