New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 4085856 = | 100 (0.970) | 24 (0.250) | 5/44 | NT | 23.2% | intergenic (+54/‑95) | cpxP/fieF | periplasmic protein combats stress/ferrous iron efflux protein F |
? | REL606 | 4214283 = | 67 (0.710) | coding (1595/1650 nt) | pgi | glucose‑6‑phosphate isomerase |
Only 100 of 185 total aligned reads displayed.
CATAGACACCATCCCTGTCTTCCCCCACATGATGTGGGGGTTTTTTTTATCCTCAATTTGCCTG > REL606/4085822‑4085885 | cggttaatcagaccatttgtcgagctatcgtggct < 1:6291614‑M1/1‑1 (MQ=255) cggttaatcagaccattggtcgagctatcgtggct > 1:7940061‑M1/35‑35 (MQ=255) cggttaatcagaccattggtcgagctatcgtggct < 1:5280031‑M1/1‑1 (MQ=255) cggttaatcagaccattggtcgagctatcgtggct < 1:7752239‑M1/1‑1 (MQ=255) cggttaatcagaccattggccgagctatcgtggct > 1:1002665‑M1/35‑35 (MQ=255) cATAGACACCATCCCTGTCTTCCCCCACATGAtgt < 1:16173363/35‑1 (MQ=255) cATAGACACCATCCCTGTCTTCCCCCACATGAtgt < 1:1438324/35‑1 (MQ=255) cATAGACACCATCCCTGTCTTCCCCCACATGAtgt < 1:18251957/35‑1 (MQ=255) cATAGACACCATCCCTGTCTTCCCCCACATGAtgt > 1:4056557/1‑35 (MQ=255) cATAGACACCATCCCTGTCTTCCCCCACATGAtgt > 1:4681987/1‑35 (MQ=255) ggttaatcagaccattggtcgagctatcgtggcTg < 1:16384973‑M1/2‑1 (MQ=255) aTAGACACCATCCCTGTCTTCCCCCACATGAtgtg < 1:14783410/35‑1 (MQ=255) aTAGACACCATCCCTGTCTTCCCCCACATGAtgtg > 1:7991448/1‑35 (MQ=255) aTAGACACCATCCCTGTCTTCCCCCACATGAtgtg > 1:3518086/1‑35 (MQ=255) tAGACACCATCCCTGTCTTCCCCCACATGATGTgn < 1:15103535/35‑1 (MQ=255) tAGACACCATCCCTGTCTTCCCCCACATGATGTgg < 1:10060158/35‑1 (MQ=255) tAGACACCATCCCTGTCTTCCCCCACATGATGTgg < 1:18697059/35‑1 (MQ=255) tAGACACCATCCCTGTCTTCCCACACATGATGTgg < 1:18510542/35‑1 (MQ=255) tAGACACCATCCCTGTATTCCCCCACATGATGTgg < 1:11017385/35‑1 (MQ=255) gttaatcagaccattggtcgagctatcgtggcTgg < 1:17580807‑M1/3‑1 (MQ=255) gttaatcagaccattggtcgagctatcgtggcTgg < 1:10238223‑M1/3‑1 (MQ=255) gttaatcagaccattggtcgagctatcgtggcTgg < 1:11245895‑M1/3‑1 (MQ=255) gttaatcagaccattggtcgagctatcgtggcTgg < 1:6552748‑M1/3‑1 (MQ=255) gttaatcagaccattggccgagctatcgtggcTgg < 1:8952963‑M1/3‑1 (MQ=255) ttaatcagaccattggtcgagctatcgtggctggt < 1:15416521‑M1/4‑2 (MQ=255) ttaatcagaccattggtcgagctatcgtggcTggg < 1:16986395‑M1/4‑1 (MQ=255) aGACACCATCCCTGTCTTCCCCCACATGATGTggg < 1:17594398/35‑1 (MQ=255) aGACACCATCCCTGTCTTCCCCCACATGATGTggg > 1:9871432/1‑35 (MQ=255) aGACACCATCCCTGTCTTCACCCACATGATGTggg < 1:11563602/35‑1 (MQ=255) taatcagaccattggtcgagctatcgtggcTgggg < 1:15677561‑M1/5‑1 (MQ=255) gACACCATCCCTGTCTTCCCCCACATGATGTgggg > 1:3687861/1‑35 (MQ=255) acacCATCCCTGTCTTCCCCCACATGATGTggggg > 1:13055970/1‑35 (MQ=255) acacCATCCCTGTCTTCCCCCACATGATGTggggg < 1:11644029/35‑1 (MQ=255) cacCATCCCTGTCTTCCCCCACATGATGTGGGGGt < 1:19872487/35‑1 (MQ=255) cacCATCCCTGTCTTCCCCCACATGATGTGGGGGt < 1:74153/35‑1 (MQ=255) tcagaccattggtcgagctatcgtggctggggggt < 1:2156478‑M1/8‑3 (MQ=255) tcagaccattggtcgagctatcgtggcTGGGGGtt < 1:6851947‑M1/8‑1 (MQ=255) acCATCCCTGTCTTCCCCCACATGATGTGGGGGtt < 1:19117474/35‑1 (MQ=255) acCATCCCTGTCTTCCCCCACATGATGTGGGGGtt < 1:19641901/35‑1 (MQ=255) acCATCCCTGTCTTCCCCCACATGATGTGGGGGtt < 1:15202970/35‑1 (MQ=255) acCATCCCTGTCTTCCCCCACATGATGTGGGGGtt < 1:14829896/35‑1 (MQ=255) ccATCCCTGTCTTCCCCCACATGATGTGGGGGttt < 1:5593183/35‑1 (MQ=255) ccATCCCTGTCTTCCCCCACATGATGTGGGGGttt < 1:8665756/35‑1 (MQ=255) cATCCCTGTCTTCCCCCACATGATGTGGGGGtttt < 1:695162/35‑1 (MQ=255) cATCCCTGTCTTCCCCCACATGATGTGGGGGtttt < 1:2871431/35‑1 (MQ=255) agaccattggtcgagctatcgtggcTGGGGGtttt < 1:20032548‑M1/10‑1 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGttttt > 1:8522963/1‑35 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGttttt < 1:15878535/35‑1 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGgtttt > 1:5196864/1‑35 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGgtttt > 1:10046580/1‑35 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGgtttt > 1:18623174/1‑35 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGgtttt > 1:13078307/1‑35 (MQ=255) aTCCCTGTCTTCCCCCACATGATGTGGGGGgtttt > 1:17412663/1‑35 (MQ=255) tCCCTGTCTTCCCCCACATGATGTGGGGGgttttt > 1:16070879/1‑35 (MQ=255) tCCCTGTCTTCCCCCACATGATGTGGGGGgttttt > 1:14548465/1‑35 (MQ=255) cccTGTCTTCCCCCACATGATGTGGGGGttttttt < 1:19054136/35‑1 (MQ=255) cccTGTCTTCCCCCACATGATGTGGGGGttttttt < 1:10812427/35‑1 (MQ=255) cccTGTCTTCCCCCACATGATGTGGGGGgtttttt > 1:11782813/1‑35 (MQ=255) ccattggtcgagctatcgtggcTGGTGGttttttt < 1:10149824‑M1/13‑1 (MQ=255) ccattggtcgagctatcgtggcTGGGGGttttttt < 1:12154751‑M1/13‑1 (MQ=255) ccattggtcgagctatcgtggcTGGGGGgtttttt < 1:18818946‑M1/13‑1 (MQ=255) ccTGTCTTCCCCCACATGATGTGGGGGtttttttt < 1:3327019/35‑1 (MQ=255) ccTGTCTTCCCCCACATGATGTGGGGGgttttttt > 1:3675127/1‑35 (MQ=255) cattggtcgagctatcgtggcTGGTGGtttttttt < 1:20446137‑M1/14‑1 (MQ=255) cattggtcgagctatcgtggcTGGGGGtttttttt < 1:9571317‑M1/14‑1 (MQ=255) cattggtcgagctatcgtggcTGGGGGtttttttt < 1:7855256‑M1/14‑1 (MQ=255) cTGTCTTCCCCCACATGATGTGGGGGgtttttttt > 1:12004617/1‑34 (MQ=255) cTGTCTTCCCCCACATGATGTGGGGGTTTTTTTTa < 1:274646/35‑1 (MQ=255) attggtcgagctatcgtggcTGGTGgttttttttt < 1:5490673‑M1/15‑2 (MQ=255) attggtcgagctatcgtggcTGGGGgttttttttt < 1:6242381‑M1/15‑2 (MQ=255) attggtcgagctatcgtggcTGGGGgtttcttttt < 1:4561742‑M1/15‑2 (MQ=255) ttggtcgagctatcgtggcTGGGggtttttttttt < 1:11125523‑M1/16‑3 (MQ=255) tGTCTTCCCCCACATGATGTGGGGGgttttttttt > 1:16316835/1‑33 (MQ=37) tGTCTTCCCCCACATGATGTGGGGGgttttttttt > 1:2612994/1‑33 (MQ=37) tGTCTTCCCCCACATGATGTGGGGGTTTTTTTTAt < 1:9696462/35‑1 (MQ=255) tGTCTTCCCCCACATGATGTGGGGGTTTTTTTTAt < 1:14225423/35‑1 (MQ=255) tggtcgagctatcgtggcTGGgggttttttttttt < 1:14650465‑M1/17‑4 (MQ=255) tCTTCCCCCACATGATGTGGGGGTTTTTTTTATcc < 1:11886996/35‑1 (MQ=255) cTTCCCCCACATGATGTGGGGGTTTTTTTTATCCt < 1:5027224/35‑1 (MQ=255) cTTCCCCCACATGATGTGGGGGGTTTTTTTATTCt > 1:20254376/1‑35 (MQ=37) ttCCCCCACATGATGTGGTGGTTTTTTTTATCCTc < 1:15576863/35‑1 (MQ=255) ttCCCCCACATGATGTGGGGGGTTTTTTTTTCCTc > 1:12719590/1‑35 (MQ=25) tCCCCCACATGATGTGGGGG‑TTTTTTTATCCTCaa < 1:16558481/35‑1 (MQ=37) gcccccGCATGATGTGGGGGTTTTTTTTATCCTCa < 1:12231398/34‑1 (MQ=255) cccccACATGATGTGGGGGTTTTTTTTATCCTCaa > 1:12513393/1‑35 (MQ=255) cccACATGATGTGGGGGTTTTTTTTATCCTCAAtt < 1:17257602/35‑1 (MQ=255) cccACATGATGTGGGGGTTTTTTTTATCCTCAAtt < 1:18073537/35‑1 (MQ=255) cccACATGATGTGGGGGGTTTTTTTATCCTCAAtt > 1:8786463/1‑35 (MQ=255) cacaTGATGTGGGGGTTTTTTTTATCCTCAATTTg < 1:9497579/35‑1 (MQ=255) cacaTGATGTGGGGGTTTTTTTTATCCTCAATTTg < 1:5464025/35‑1 (MQ=255) cacaTGATGTGGGGGGTTTTTTTATCCTCAATTTg > 1:3041094/1‑35 (MQ=255) acaTGATGTGGGGGTTTTTTTTATCCTCAATTTGc < 1:897353/35‑1 (MQ=255) caTGATGTGGGGGTTTTTTTTTTCCTCAATTTGcc > 1:4199888/1‑35 (MQ=255) caTGATGTGGGGGGTTTTTTTATCCTCAATTTGcc > 1:18414976/1‑35 (MQ=255) atgatgTGGGGGTTTTTTTTATCCTCAATTTGCct > 1:6009550/1‑35 (MQ=255) atgatgTGGGGGTTTTTTTTATCCTCAATTTGCct < 1:3767310/35‑1 (MQ=255) tgatgTGGGGGTTTTTTTTATCCTCAATTTGCctg < 1:10564806/35‑1 (MQ=255) tgatgTGGGGGTTTTTTTTATCCTCAATTTGCctg < 1:2895978/35‑1 (MQ=255) tgatgTGGGGGTTTTTTTTATCCTCAATTTGCctg < 1:9121681/35‑1 (MQ=255) tgatgTGGGGGTTTTTTTTATCCTCAATTTGCctg < 1:12864868/35‑1 (MQ=255) | CATAGACACCATCCCTGTCTTCCCCCACATGATGTGGGGGTTTTTTTTATCCTCAATTTGCCTG > REL606/4085822‑4085885 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |