New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 326204 = | 101 (0.980) | 10 (0.130) | 4/36 | NT | 14.1% | coding (849/1887 nt) | prpE | predicted propionyl‑CoA synthetase with ATPase domain |
? | REL606 | = 4116137 | 46 (0.600) | intergenic (+15/‑78) | katG/yijE | catalase/hydroperoxidase HPI(I)/predicted permease |
Only 100 of 133 total aligned reads displayed.
ACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTA > REL606/4116103‑4116171 | aCCGTTTCGACCTGCTGTAATCTGACCCCGTTCAg < 1:15485607/35‑1 (MQ=255) aCCGTTTCGACCTGCTGTAATCTGACCCCGTTCAg < 1:8439524/35‑1 (MQ=255) aCCGTTTCGACCTGCTGTAATCTGACCCCGTTCAg > 1:18047326/1‑35 (MQ=255) aCCGTTTCGACCTGCTGTAATCTGACCCCGTTCAg < 1:2338567/35‑1 (MQ=255) ccGTTTCGACCTGCTGTAATCTGACCCCGTTCAGc > 1:10384505‑M2/1‑34 (MQ=255) ccGTTTCGACCTGCTGTAATCTGACCCCGTTCAGc > 1:13861614‑M2/1‑34 (MQ=255) cGTTTCGACCTGCTGTAATCTGACCCCGTTCCGcg < 1:2461309‑M2/35‑3 (MQ=255) cGTTTCGACCTGCTGTAATCTGACCCCGTTCAGcg < 1:19690516‑M2/35‑3 (MQ=255) cGTTTCGACCTGCTGTAATCTGACCCCGTTCAGcg > 1:10796522‑M2/1‑33 (MQ=255) cGTTTCGACCTGCTGTAATCTGACCCCGTTCAGcg > 1:2298412‑M2/1‑33 (MQ=255) cGTTTCGACCTGCTGTAATCTGACCCCGTTCAGcg > 1:1232172‑M2/1‑33 (MQ=255) gTTTCGACCTGCTGTAATCTGACCCCGTTCAGcgg > 1:19298448‑M2/1‑32 (MQ=255) gTTTCGACCTGCTGTAATCTGACCCCGTTCAGcgg < 1:13272372‑M2/35‑4 (MQ=255) gTTTCGACCTGCTGTAATCTGACCCCGTTCAGcgg > 1:13955956‑M2/1‑32 (MQ=255) gTTTCGACCTGCTGTAATCTGACCCCGTTCAGcgg > 1:17472734‑M2/1‑32 (MQ=255) gTTTCGACCTGCTGTAATCTGACCCCGTTCAGcgg > 1:1673714‑M2/1‑32 (MQ=255) gTTTCGACCTGCTGTAATCTGACCCCGTTCAGcgg < 1:10103973‑M2/35‑4 (MQ=255) gTTTCGACCTGCTGGAATCTGACCCCGGTCCGCgg > 1:18288505/1‑35 (MQ=25) gTTTCGACATGCTGTAATCTGACCCCGTTCAGcgg > 1:9887167‑M2/1‑32 (MQ=255) gTTTCGAACTGCTGTAATCTGACCCCGTTCAGcgg > 1:4224071‑M2/1‑32 (MQ=255) tttCGACCTGCTGTAATCTGACCCCGTTCAGcggc > 1:6182935‑M2/1‑31 (MQ=255) tttCGACCTGCTGTAATCTGACCCCGTTCAGcggc > 1:13663855‑M2/1‑31 (MQ=255) tttCGACCTGCTGTAATCTGACCCCGTTCAGcggc < 1:13007314‑M2/35‑5 (MQ=255) ttCGACCTGCTGTAATCTGACCCCGTTCAGcggct > 1:12756924‑M2/1‑30 (MQ=255) tCGACCTGCTGTAATCTGACCCCGTTCAGcggctg > 1:12876655‑M2/1‑29 (MQ=255) tCGACCTGCTGTAATCTGACCCCGTTCAGcggctg > 1:3308616‑M2/1‑29 (MQ=255) cGACCTGCTGTAATCTGACCCCGTTCAGcggctgg < 1:13824661‑M2/35‑8 (MQ=255) cGACCTGCTGTAATCTGACCCCGTTCAGCGgctgc < 1:18202737/35‑1 (MQ=255) cGACCTGCTGTAATCTGACCCCGTTCAGCGgctgc < 1:10398747/35‑1 (MQ=255) cGACCTGCTGTAATCTGACCCCGTTCAGCGgctgc < 1:16643569/35‑1 (MQ=255) gACCTGCTGTAATCTGACCCCGTTCAGcgggtggg < 1:8882106‑M2/35‑9 (MQ=255) gACCTGCTGTAATCTGACCCCGTTCAGcggctggg < 1:4978393‑M2/35‑9 (MQ=255) gACCTGCTGTAATCTGACCCCGTTCAGcggctggg < 1:7143198‑M2/35‑9 (MQ=255) gACCTGCTGTAATCTGACCCCGTTCAGcggctggg < 1:9950333‑M2/35‑9 (MQ=255) gACCTGCTGTAATCTGACCCCGTTCAGCGgctgct < 1:17476266/35‑1 (MQ=255) aCCTTCTGTAATCTGACCCCGTTCAGcggctgggt < 1:6894330‑M2/35‑10 (MQ=255) aCCTGCTGTAATCTGACCCCGTTCAGCGGCtgctt < 1:7338395/35‑1 (MQ=255) aCCTGCTGTAATCTGACCCCGTTCAGCGGCtgctt < 1:11446635/35‑1 (MQ=255) aCCTGCTGTAATCTGACCCCGTTCAGCGGCtgctt < 1:13479288/35‑1 (MQ=255) ccTGCTGTAATCTGACCCCGTTCAGcggctgggtg < 1:12151299‑M2/35‑11 (MQ=255) ccTGCTGTAATCTGACCCCGTTCAGcggctgggcg < 1:16580461‑M2/35‑11 (MQ=255) ccTGCTGTAATCTGACCCCGTTCAGCGGCtgcttg < 1:8349043/35‑1 (MQ=255) ccTGCTGTAATCTGACCCCGTTCAGCGGCtgcttg < 1:13430212/35‑1 (MQ=255) ctgctgTAATCTGACCCCGTTCAGcggctgggtgg < 1:7390247‑M2/35‑12 (MQ=255) ctgctgTAATCTGACCCCGTTCAGcggctgggtgg < 1:19247344‑M2/35‑12 (MQ=255) ctgctgTAATCTGACCCCGTTCAGcggctgggtgg < 1:10113398‑M2/35‑12 (MQ=255) ctgctgTAATCTGACCCCGTTCAGCGGCtgcttgc < 1:11295681/35‑1 (MQ=255) ctgctgTAATCTGACCCCGTTCAGCGGCtgcttgc < 1:16833770/35‑1 (MQ=255) ctgctgTAATCTGACCCCGTTCAGCCGCtgcttgc > 1:5875112/1‑35 (MQ=255) tgctgTAATCTGACCCCGTTCAGcggctgggtggt < 1:5690320‑M2/35‑13 (MQ=255) tgctgTAATCTGACCCCGTTCAGcggctgggtgct < 1:14322753‑M2/35‑13 (MQ=255) tgctgTAATCTGACCCCGTTCAGCGGCtgcttgct > 1:13164999/1‑35 (MQ=255) tgctgTAATCTGACCCCGTTCAGCGGCtgcttgct < 1:2097528/35‑1 (MQ=255) tgctgTAATCTGACCCCGTTCAGCGGCtgcttgct < 1:11848166/35‑1 (MQ=255) gctgTAATCTGACCCCGTTCAGcggctggggggtg < 1:13349467‑M2/35‑14 (MQ=255) gctgTAATCTGACCCCGTTCAGCGGCTGCTTGCTg < 1:7102553/35‑1 (MQ=255) gctgTAATCTGACCCCGTTCAGCGGCTGCTTGCTg < 1:16797637/35‑1 (MQ=255) gctgTAATCTGACCCCGTTCAGCGGCTGCTTGCTg < 1:6319234/35‑1 (MQ=255) ctgTAATCTGACCCCGTTCAGcggctgggtggtgg < 1:6375029‑M2/35‑15 (MQ=255) ctgTAATCTGACCCCGTTCAGcggctgggtggcgg < 1:10739194‑M2/35‑15 (MQ=255) ctgTAATCTGACCCCGTTCAGCGGCTGCTTGCTgg < 1:19771365/35‑1 (MQ=255) ctgTAATCTGACCCCGTTCAGCGGCTGCTTGCTgg < 1:4469168/35‑1 (MQ=255) ctgTAATCTGACCCCGTTCAGCGGCTGCTTGCTgg < 1:12525616/35‑1 (MQ=255) tgTAATCTGACCCCGTTCAGcggctgggtggtggt < 1:16142710‑M2/35‑16 (MQ=255) tgTAATCTGACCCCGTTCAGcggctgggtggtggg < 1:2747014‑M2/35‑16 (MQ=255) ttAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCa < 1:2472693/34‑1 (MQ=255) gTAATCTGACCCCGTTCAGcggctgggtgctgggc < 1:14783956‑M2/35‑17 (MQ=255) gTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCa < 1:431150/35‑1 (MQ=255) gTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCa < 1:8797303/35‑1 (MQ=255) tAATCTGACCCCGTTCAGcggctgggtggtgggag < 1:11989631‑M2/35‑18 (MQ=255) tAATCTGACCCCGTTCAGCGGCTGGGTGCTGGGAg > 1:9708261/1‑35 (MQ=25) aaTGTGACCCCGTTCAGCGGCTGCTTGCTGGCAGt < 1:4750436/35‑1 (MQ=255) aaTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGt < 1:12427324/35‑1 (MQ=255) aaTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGt < 1:9409035/35‑1 (MQ=255) aaTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGt < 1:2084986/35‑1 (MQ=255) aTCTGACCCCGTTCAGcggctgggtggtggggggg < 1:19657853‑M2/35‑20 (MQ=255) aTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTc < 1:11633695/35‑1 (MQ=255) aTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTc < 1:16460762/35‑1 (MQ=255) aTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTc < 1:15732141/35‑1 (MQ=255) aTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTc < 1:17468564/35‑1 (MQ=255) aTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTc < 1:17977357/35‑1 (MQ=255) aTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTc < 1:13114597/35‑1 (MQ=255) aTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTc < 1:1958540/35‑1 (MQ=255) tCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCg < 1:539920/35‑1 (MQ=255) tCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCg < 1:8383901/35‑1 (MQ=255) cTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGc < 1:3231891/35‑1 (MQ=255) cTGACCCAGTTCAGCGGCTGCTTGCTGGCAGTGGc < 1:2375526/35‑1 (MQ=25) tGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCt < 1:19567269/35‑1 (MQ=255) tGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCt < 1:20314116/35‑1 (MQ=255) tGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCt < 1:4943451/35‑1 (MQ=255) gACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTg < 1:7827149/35‑1 (MQ=255) aCCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGa < 1:18125422/35‑1 (MQ=255) aCCCAGTTCAGCGGCTGCTTGCTGGCAGTCGCTGa < 1:6355328/35‑1 (MQ=255) ccccGTTCAGCGGCTGCTTGCTGGCAGTCGCTGaa < 1:19064542/35‑1 (MQ=255) cccGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAAc < 1:19564383/35‑1 (MQ=255) cGTGCAGCGGCTGCTTGCTGCCAGTCGCTGAACGt < 1:18284057/35‑1 (MQ=25) tCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCt < 1:10869941/35‑1 (MQ=255) aGCGGCTGCTTGCTGGCAGTCGCTGACCGTTCttt < 1:4160446/35‑1 (MQ=255) aGCGGCTGCTTGCTGGCAGTCGCTGACCGTTCttt < 1:4769304/35‑1 (MQ=255) gCGGCTGCTTGCTGGCAGTCGCTGACCGTTCTTTa < 1:508108/35‑1 (MQ=255) | ACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTA > REL606/4116103‑4116171 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |