New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 207313 = | 39 (0.380) | 6 (0.060) | 3/44 | NT | 6.9% | coding (1124/1149 nt) | lpxB | lipid‑A‑disaccharide synthase |
? | REL606 | 1513006 = | 126 (1.340) | coding (3736/3741 nt) | narZ | nitrate reductase 2 (NRZ), alpha subunit |
Only 100 of 229 total aligned reads displayed.
AAGCACCATGCCGACTTGTGAACGGATTTTCATTTTTTCGCCTCCTGTACCTGATCGCGACCTTCATCA > REL606/1512972‑1513040 | aaattcgatcattgtgctaactccagaacggcttt > 1:5495060‑M2/35‑35 (MQ=255) aaGCACCATTCCGACTTGTGAACGGATTTTCAttt > 1:7052998/1‑35 (MQ=255) aaGCACCATGCCGACTTGTGAACGGATTTTCAttt > 1:19682721/1‑35 (MQ=40) aaGCACCATGCCGACTTGTGAACGGATTTTCAttt < 1:5968673/35‑1 (MQ=40) aaGCACCATGCCGACTTGTGAACGGATTTTCAttt < 1:9409928/35‑1 (MQ=40) aaGCACCATGCCGACTTGTGAACGGATTTTCAttt > 1:9217339/1‑35 (MQ=40) aaGCACCATGCCGACTTGTGAACGGATTTTCAttt < 1:2673811/35‑1 (MQ=40) aattcgatcattgtgctaactccagaacggctttt > 1:11131682‑M2/34‑35 (MQ=255) aGCACCATGCCGACTTGTGAACGGATTTTCAtttt > 1:18734935/1‑35 (MQ=38) aGCACCATGCCGACTTGTGAACGGATTTTCAtttt < 1:1841878/35‑1 (MQ=38) aGCACCATGCCGACTTGTGAACGGATTTTCAtttt > 1:16506917/1‑35 (MQ=38) aGCACCATGCCGACTTGTGAACGGATTTTCAtttt > 1:1507775/1‑35 (MQ=38) aGCACCATGCCGACTTGTGAACGGATTTTCAtttt < 1:15025284/35‑1 (MQ=38) aGCACCATGCCGACTTGTGAACGGATTTTCAtttt > 1:3804419/1‑35 (MQ=38) gCACCATGCCGACTTGTTAACGGATTTTCAttttt > 1:11753311/1‑35 (MQ=255) gCACCATGCCGACTTGTGAACGGATTTTCAttttt < 1:11293009/35‑1 (MQ=40) gCACCATGCCGACTTGTGAACGGATTTTCAttttt > 1:20128215/1‑35 (MQ=40) gCACCATGCCGACTTGTGAACGGATTTTCAttttt < 1:11015539/35‑1 (MQ=40) ttcgatcattgtgctaactccagaacggctttttc > 1:20510204‑M2/32‑34 (MQ=255) cACCATGCCGACTTGTGAACGGATTTTCAtttttt > 1:14836676/1‑35 (MQ=255) cACCATGCCGACTTGTGAACGGATTTTCAtttttt < 1:3335784/35‑1 (MQ=255) tcgatcattgtgctaactccagaacggctttttgc > 1:5096569‑M2/31‑33 (MQ=255) tcgatcattgtgctaactccagaacggctttttct > 1:14492731‑M2/31‑33 (MQ=255) tcgatcattgtgctaactccagaacggcttttgtt > 1:8901435‑M2/31‑32 (MQ=255) tcgatcattgtgctaactccagaacggcttTTTTc > 1:6461776‑M2/31‑35 (MQ=255) aCCATGCCGACTTGTGAACGGATTTTCATTTTTTc < 1:16869007/35‑1 (MQ=255) aCCATGCCGACTTGTGAACGGATTTTCATTTTTTc > 1:6588782/1‑35 (MQ=255) ccATGCCGACTTGTGAACGGATTTTCATTTTTTCg < 1:8009398/35‑1 (MQ=255) ccATGCCGACTTGTGAACGGATTTTCATTTTTTCg > 1:132458/1‑35 (MQ=255) ccATGCCGACTTGTGAACGGATTTTCATTTTTTCg > 1:2469800/1‑35 (MQ=255) cATGCCGACTTGTGAACGGATTTTCATTTTTTCGc < 1:19343055/35‑1 (MQ=255) cATGCCGACTTGTGAACGGATTTTCATTTTTTCGc < 1:1399220/35‑1 (MQ=255) cATGCCGACTTGTGAACGGATTTTCATTTTTTCGc > 1:12934164/1‑35 (MQ=255) cATGCCGACTTGTGAACGGATTTTCATTTTTTCGc > 1:19769955/1‑35 (MQ=255) aTGCCGACTTGTGAACGGATTTTCATTTTTTCGcc > 1:677826/1‑35 (MQ=255) aTGCCGACTTGTGAACGGATTTTCATTTTTTCGcc > 1:12792180/1‑35 (MQ=255) aTGCCGACTTGTGAACGGATTTTCATTTTTTCGcc < 1:12652774/35‑1 (MQ=255) tcattgtgctaactccagaacggcttTTTCCGcct > 1:8103527‑M2/27‑35 (MQ=255) tGCCGACTTGTGAACGGATTTTCATTTTTTCGcct < 1:5327553/35‑1 (MQ=255) tGCCGACTTGTGAACGGATTTTCATTTTTTCGcct < 1:19539748/35‑1 (MQ=255) tGCCGACTTGTGAACGGATTTTCATTTTTTCGcct < 1:15672092/35‑1 (MQ=255) tGCCGACTTGTGAACGGATTTTCATTTTTTCGcct < 1:2342836/35‑1 (MQ=255) tGCCGACTTGTGAACGGATTTTCATTTTTTCGcct > 1:694845/1‑35 (MQ=255) gCCGACTTGTGAACGGATTTTCATTTTTTCGcctc > 1:10648419/1‑35 (MQ=255) cattgtgctaactccagaacggcttTTTTCtcctg > 1:9497200‑M2/26‑34 (MQ=255) ttgtgctaactccagaacggcttTTTTCGcctcct > 1:4884831‑M2/24‑35 (MQ=255) cGACTTGTGTACGGATTTTCATTTTTTCGcctcct < 1:4133541/35‑1 (MQ=255) cGACTTGTGAACGGATTTTCATTTTTTCGcctcct > 1:17822697/1‑35 (MQ=255) cGACTTGTGAACGGATTTTCATTTTTTCGcctcct > 1:14377214/1‑35 (MQ=255) cGACTTGTGAACGGATTTTCATTTTTTCGcctcct > 1:11592700/1‑35 (MQ=255) agACTTGTGAACGGATTTTCATTTTTTCGcctcct < 1:15495273/34‑1 (MQ=255) gACTTGTGAACGGATTTTCATTTTTTCGCCTCCTg < 1:5623622/35‑1 (MQ=255) aCTTGTGAACGGATTTTCATTTTTTCGCCTCCTGt > 1:17547822/1‑35 (MQ=255) aCTTGTGAACGGATTTTCATTTTTTCGCCTCCTGt < 1:16193153/35‑1 (MQ=255) aCTTGTGAACGGATTTTCATTTTTTCGCCTCCTGt < 1:12694537/35‑1 (MQ=255) ttGTGAACGGATTTTCATTTTTTCGCCTCCTGTAc > 1:5767870/1‑35 (MQ=255) ttGTGAACGGATTTTCATTTTTTCGCCTCCTGTAc > 1:5998024/1‑35 (MQ=255) tgtgAACGGATTTTCATTTTTTCGCCTCCTGTAcc < 1:20109964/35‑1 (MQ=255) tgtgAACGGATTTTCATTTTTTCGCATCCTGTAcc < 1:9006401/35‑1 (MQ=255) gtgAACGGATTTTCATTTTTTCGCCTCCTGTACCt < 1:19437308/35‑1 (MQ=255) gtgAACGGATTTTCATTTTTTCGCCTCCTGTACCt < 1:5361903/35‑1 (MQ=255) gtgAACGGATTTTCATTTTTTCGCCTCCTGTACCt < 1:14887485/35‑1 (MQ=255) tgAACGGATTTTCATTTTTTCGCCTCCTGTACCTg < 1:4667080/35‑1 (MQ=255) tgAACGGATTTTCATTTTTTCGCCTCCTGTACCTg < 1:18461551/35‑1 (MQ=255) tgAACGGATTTTCATTTTTTCGCCTCCTGTACCTg > 1:7158443/1‑35 (MQ=255) tgAACGGATTTTCATTTTTTCGCCTCCTGTACCTg > 1:10425118/1‑35 (MQ=255) gAACGGATTTTCATTTTTTCGCCTCCTGTACCTGa < 1:9818832/35‑1 (MQ=255) gAACGGATTTTCATTTTTTCGCCTCCTGTACCTGa > 1:176820/1‑35 (MQ=255) gAACGGATTTTCATTTTTTCGCCTCCTGTACCTGa < 1:11868694/35‑1 (MQ=255) aaCGGATTTTCATTTTTTCGCCTCCTGTACCTGAt > 1:13478125/1‑35 (MQ=255) aCGGATTTTCATTTTTTCGCCTCCTGTACCTGATc > 1:15858302/1‑35 (MQ=255) aCGGATTTTCATTTTTTCGCCTCCTGTACCTGATc > 1:4496554/1‑35 (MQ=255) aCGGATTTTCATTTTTTCGCCTCCTGTACCTGATc > 1:13771730/1‑35 (MQ=255) aCGGATTTTCATCTTTTCGCCTCCTGTACCTGATc < 1:18241252/35‑1 (MQ=255) cGGATTTTCATTTTTTCGCCTCCTGTACCTGATcg < 1:8363261/35‑1 (MQ=255) cGGATTTTCATTTTTTCGCCTCCTGTACCTGATcg > 1:10165424/1‑35 (MQ=255) ggATTTTCATTTTTTCGCCTCCTGTACCTGATcgc < 1:2019027/35‑1 (MQ=255) ggATTTTCATTTTTTCGCCTCCTGTACCTGATcgc > 1:13590159/1‑35 (MQ=255) aTTTTCATTTTTTCGCCTCCTGTACCTGATCGCGa < 1:3108992/35‑1 (MQ=255) aTTTTCATTTTTTCGCCTCCTGTACCTGATCGCGa > 1:6121248/1‑35 (MQ=255) ttttCATTTTTTCGCCTCCTGTACCTGATCGCGAc > 1:8717782/1‑35 (MQ=255) ttttCATTTTTTCGCCTCCTGTACCTGATCGCGAc > 1:6027563/1‑35 (MQ=255) ttttCATTTTTTCGCCTCCTGTACCTGATCGCGAc < 1:3931560/35‑1 (MQ=255) ttttCATTTTTTCGCCTCCTGTACCTGATCGCGAc < 1:7714065/35‑1 (MQ=255) tttCATTTTTTCGCCTCCTGTACCTGATCGCGAcc < 1:6377187/35‑1 (MQ=255) tttCATTTTTTCGCCTCCTGTACCTGATCGCGAcc < 1:11329643/35‑1 (MQ=255) tttCATTTTTTCGCCTCCTGTACCTGATCGCGAcc < 1:7790533/35‑1 (MQ=255) ttCATTTTTTCGCCTCCTGTACCTGATCGCGACCt < 1:4604421/35‑1 (MQ=255) ttCATTTTTTCGACTCCTGTACCTGATCGCGACCt < 1:2591194/35‑1 (MQ=255) tCATTTTTTCGCCTCCTGTACCTGATCGCGACCtt < 1:18929754/35‑1 (MQ=255) tCATTTTTTCGCCTCCTGTACCTGATCGCGACCtt < 1:4320663/35‑1 (MQ=255) cATTTTTTCGCCTCCTGTACCTGATCGCGACCTtc > 1:15841330/1‑35 (MQ=255) ttTTTTCGCCTCCTGTACCTGATCGCGACCTtcat > 1:17136810‑M2/3‑35 (MQ=255) ttTTTTCGCCTCCTGTACCTGATCGCGACCTtcat > 1:1771158‑M2/3‑35 (MQ=255) ttTTTTCGCCTCCTGTACCTGATCGCGACCTtcat < 1:10212491‑M2/33‑1 (MQ=255) ttttCGCCTCCTGTACCTGATCGCGACCTtcatca < 1:7264316/35‑1 (MQ=255) ttttCGCCTCCTGTACCTGATCGCGACCTtcatca > 1:1668003/1‑35 (MQ=255) ttttCGCCTCCTGTACCTGATCGCGACCTtcatca > 1:17615322/1‑35 (MQ=255) ttttCGCCTCCTGTACCTGATCGCGACCTtcatca < 1:19804639/35‑1 (MQ=255) ttttCGCCTCCTGTACCTGATCGCGACCTtcatca < 1:13194127/35‑1 (MQ=255) | AAGCACCATGCCGACTTGTGAACGGATTTTCATTTTTTCGCCTCCTGTACCTGATCGCGACCTTCATCA > REL606/1512972‑1513040 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |