New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1036071 | 104 (1.010) | 18 (0.180) | 6/46 | NT | 17.6% | intergenic (+43/+33) | ycbG/ompA | hypothetical protein/outer membrane protein A (3a;II*;G;d) |
? | REL606 | = 2316746 | 69 (0.700) | coding (216/891 nt) | yfbH | hypothetical protein |
Only 100 of 134 total aligned reads displayed.
TGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCCAGGT > REL606/2316712‑2316779 | tgctgcGCTCAAACGCGGCATCGCTTTATGGCTgg < 1:4342194/35‑1 (MQ=255) tgctgcGCTCAAACGCGGCATCGCTTTATGGCTgg > 1:8151683/1‑35 (MQ=255) tgctgcGCTCAAACGCGGCATCGCTTTATGGCTgg < 1:16313995/35‑1 (MQ=255) tgctgcGCTCAAACGCGGCATCGCTTTATGGCTgg < 1:8433555/35‑1 (MQ=255) gctgcGCTCAAACGCGGCATCGCTTTATGGCTGGg < 1:1445528‑M2/35‑2 (MQ=255) gctgcGCTCAAACGCGGCATCGCTTTATGGCTGGg < 1:13701810‑M2/35‑2 (MQ=255) gctgcGCTCAAACGCGGCATCGCTTTATGGCTGGg < 1:9172959‑M2/35‑2 (MQ=255) gctgcGCTCAAACGCGGCATCGCTTTATGGCTGGg < 1:20407724‑M2/35‑2 (MQ=255) ctgcGCTCAAACGCGGCATCGCTTTATGGCTGGgg < 1:12959373‑M2/35‑3 (MQ=255) ctgcGCTCAAACGCGGCATCGCTTTATGGCTGGgg < 1:1092614‑M2/35‑3 (MQ=255) tgcGCTCAAACGCGTCATCGCTTTATGGCTGGggg < 1:18384630‑M2/35‑4 (MQ=255) tgcGCTCAAACGCGGCATCGCTTTATGGCTGGggg < 1:13104275‑M2/35‑4 (MQ=255) tgcGCTCAAACGCGGCATCGCTTTATGGCTGGggg < 1:4147445‑M2/35‑4 (MQ=255) tgcGCTCAAACCCGGCATCGCTTTATGGCTGGggg < 1:19546198‑M2/35‑4 (MQ=255) gcgcTCAAACGCGGCATCGCTTTATGGCTGGgggg < 1:16532210‑M2/35‑5 (MQ=255) gcgcTCAAACGCGGCATCGCTTTATGGCTGGgggg < 1:3436941‑M2/35‑5 (MQ=255) cgcTCAAACGCGGCATCGCTTTATGGCTNGggggn < 1:342741‑M2/35‑6 (MQ=255) cgcTCAAACGCGGCATCGCTTTATGGCTGGGatat < 1:11738238/35‑1 (MQ=255) cgcTCAAACGCGGCATCGCTTTATGGCTGGGatat < 1:2323457/35‑1 (MQ=255) cgcTCAAACGCGGCATCGCTTTATGGCTGGGatat < 1:15683208/35‑1 (MQ=255) cgcTCAAACGCGGCATCGCTTTATGGCTGGGatat < 1:3887602/35‑1 (MQ=255) gcTCAAACGCGGCATCGCTTTATGGCTGGgggggt < 1:7579882‑M2/35‑7 (MQ=255) gcTCAAACGCGGCATCGCTTTATGGCTGGgggatt < 1:10745308‑M2/35‑7 (MQ=255) gcTCAAACGCGGCATCGCTTTATGGCTGGgggatt < 1:4047775‑M2/35‑7 (MQ=255) cTCAAACGCGGCATCGCTTTATGGCTGGgggattt < 1:5144373‑M2/35‑8 (MQ=255) cTCAAACGCGGCATCGCTTTATGGCTGGGATAttt < 1:17721900/35‑1 (MQ=255) cTCAAACGCGGCATCGCTTTATGGCTGGGATAttt < 1:10126103/35‑1 (MQ=255) tCAAACGCGGCATCGCTTTATGGCTGGggggtttt < 1:3697308‑M2/35‑9 (MQ=255) tCAAACGCGGCATCGCTTTATGGCTGGgggatttt < 1:9444665‑M2/35‑9 (MQ=255) tCAAACGCGGCATCGCTTTATGGCTGGGATAtttt < 1:3164475/35‑1 (MQ=255) cAAACGCGGCATCGCTTTATGGCTGGggggttttt < 1:7713578‑M2/35‑10 (MQ=255) cAAACGCGGCATCGCTTTATGGCTGGGATATTTTa < 1:9897120/35‑1 (MQ=255) aaaCGCGGCATCGCTTTATGGCTGGggggtttttt < 1:3426826‑M2/35‑11 (MQ=255) aaaCGCGGCATCGCTTTATGGCTGGgggatttttt < 1:13744137‑M2/35‑11 (MQ=255) aaaCGCGGCATCGCTTTATGGCTGGGATATTTTAc < 1:20375353/35‑1 (MQ=255) aaaCGCGGCATCGCTTTATGGCTGGGATATTTTAc < 1:15822717/35‑1 (MQ=255) aaaCGCGGCATCGCTTTATGGCTGGGATATTTTAc < 1:12300485/35‑1 (MQ=255) aaCGCGGCATCGCTTTATGGCTGGggggtttttct < 1:3556755‑M2/35‑12 (MQ=255) aaCGCGGCATCGCTTTATGGCTGGGATATTTTACt < 1:18957704/35‑1 (MQ=255) aaCGCGGCATCGCTTTATGGCTGGGATATTTTACt < 1:18525111/35‑1 (MQ=255) aaCGCGGCATCACTTTATGGCTGGGATATTTTACt < 1:14010413/35‑1 (MQ=255) aCGCGGCATCGCTTTATGGCTGGggggtttttttt < 1:5212776‑M2/35‑13 (MQ=255) aCGCGGCATCGCTTTATGGCTGGggggtttttttg < 1:9622703‑M2/35‑13 (MQ=255) aCGCGGCATCGCTTTATGGCTGGggggtttttttg < 1:12711325‑M2/35‑13 (MQ=255) aCGCGGCATCGCTTTATGGCTGGGATATTTTACTg < 1:3509709/35‑1 (MQ=255) aCGCGGCATCGCTTTATGGCTGGGATATTTTACTg < 1:1112615/35‑1 (MQ=255) aCGCGGCATCGCTTTATGGCTGGGATATTTTACTg < 1:6666467/35‑1 (MQ=255) aCGCGGCATCGCTTTATGGCTGGGATATTTTACTg < 1:276379/35‑1 (MQ=255) cgcgGCATCGCTTTATGGCTGGGATATTTTACTgg < 1:14106126/35‑1 (MQ=255) cgcgGCATCGCTTTATGGCTGGGATATTTTACTgg < 1:1051178/35‑1 (MQ=255) cgcgGCATCGCTTTATGGCTGGGATATTTTACTgg < 1:9732080/35‑1 (MQ=255) gcgGCATCGCTTTATGGCTGGggggttttttttgt < 1:10539573‑M2/35‑15 (MQ=255) gcgGCATCGCTTTATGGCTGGggggttttttttgg < 1:4701778‑M2/35‑15 (MQ=255) gcgGCATCGCTTTATGGCTGGggggttttttttgc < 1:5987452‑M2/35‑15 (MQ=255) gcgGCATCGCTTTATGGCTGGGATATTTTACTGGc < 1:18522523/35‑1 (MQ=255) cgGCATCGCTTTATGGCTGGGATATTTTACTGGCa < 1:19449409/35‑1 (MQ=255) cgGCATCGCTTTATGGCTGGGATATTTTACTGGCa < 1:15193463/35‑1 (MQ=255) ggCATCGCTTTATGGCTGGGATATTTTACTGGCAg < 1:2612886/35‑1 (MQ=255) ggCATCGCTTTATGGCTGGGATATTTTACTGGCAg < 1:15833132/35‑1 (MQ=255) gCATCGCTTTATGGCTGGGCTATTTTACTGGCAgg < 1:18157981/35‑1 (MQ=255) gCATCGCTTTATGGCTGGGATATTTTACTGGCAgg < 1:5552280/35‑1 (MQ=255) gCATCGCTTTATGGCTGGGATATTTTACTGGCAgg < 1:5781253/35‑1 (MQ=255) cATCGCTTTATGGCTGGGATATTTTACTGGCAGGt < 1:9877413/35‑1 (MQ=255) cATCGCTTTATGGCTGGGATATTTTACTGGCAGGt < 1:20420874/35‑1 (MQ=255) cATCGCTTTATGGCTGGGATATTTTACTGGCAGGt < 1:11148943/35‑1 (MQ=255) aTCGCTTTATGGCTGGGATATTTTACTGGCAGGTa < 1:4340404/35‑1 (MQ=255) aTCGCTTTATGGCTGGGATATTTTACTGGCAGGTa < 1:17881065/35‑1 (MQ=255) aTCGCTTTATGGCTGGGATATTTTACTGGCAGGTa < 1:18665550/35‑1 (MQ=255) aTCGCTTTATGGCTGGGATATTTTACTGGCAGGTa < 1:15173638/35‑1 (MQ=255) tCGCTTTATGGCTGGGATATTTTACTGGCAGGTAc < 1:17088474/35‑1 (MQ=255) tCGCTTTATGGCTGGGATATTTTACTGGCAGGTAc < 1:16639549/35‑1 (MQ=255) tCGCTTTATGGCTGGGATATTTTACTGGCAGGTAc < 1:13360894/35‑1 (MQ=255) tCGCTTTATGGCTGGGATATTTTACTGGCAGGTAc < 1:4740272/35‑1 (MQ=255) cGCTTTATGGCTGGGATATTTTACTGGCAGGTACg < 1:6033070/35‑1 (MQ=255) cGCTTTATGGCTGGGATATTTTACTGGCAGGTACg < 1:16588082/35‑1 (MQ=255) cGCTTTATGGCTGGGATATTTTACTGGCAGGTACg < 1:16150878/35‑1 (MQ=255) gCTTTATGGCTGGGATATTTTACTGGCAGGTACgg < 1:16290476/35‑1 (MQ=255) gCTTTATGGCTGGGATATTTTACTGGCAGGTACgg < 1:1717859/35‑1 (MQ=255) gCTTTATGGCTGGGATATTTTACTGGCAGGTACgg < 1:20314235/35‑1 (MQ=255) cTTTATGGCTGGGATATTTTACTGGCAGGTACGGc < 1:11197349/35‑1 (MQ=255) cTTTATGGCTGGGATATTTTACTGGCAGGTACGGc < 1:9188369/35‑1 (MQ=255) ttATGGCTGGGATATTTTACTGGCAGGTACGGCCt < 1:17247379/35‑1 (MQ=255) ttATGGCTGGGATATTTTACTGGCAGGTACGGCCt < 1:8388224/35‑1 (MQ=255) ttATGGCTGGGATATTTTACTGGCAGGTACGGCCt < 1:14522574/35‑1 (MQ=255) tATGGCTGGGATATTTTACTGGCAGGTACGGCCTg < 1:2696774/35‑1 (MQ=255) tATGGCTGGGATATTTTACTGGCAGGTACGGCCTg < 1:6387579/35‑1 (MQ=255) tATGGCTGGGATATTTTACTGGCAGGTACGGCCTg < 1:17577884/35‑1 (MQ=255) aTGGCTGGGATATTTTACTGGCAGGTACGGCCTgg < 1:18819368/35‑1 (MQ=255) tGGCTGGGATATTTTACTGGCAGGTACGGCCTGGc < 1:7644393/35‑1 (MQ=255) tGGCTGGGATATTTTACTGGCAGGTACGGCCTGGc < 1:10006892/35‑1 (MQ=255) ggCTGGGATATTTTACTGGCAGGTACGGCCTGGcc < 1:11206127/35‑1 (MQ=255) ggCTGGGATATTTTACTGGCAGGTACGGCCTGGcc < 1:18197522/35‑1 (MQ=255) ggCTGGGATATTTTACTGGCAGGTACGGCCTGGcc < 1:10047125/35‑1 (MQ=255) gCTGGGATATTTTACTGGCAGGTACGGCCTGGCCa < 1:12216495/35‑1 (MQ=255) gCTGGGATATTTTACTGGCAGGTACGGCATGGCCa < 1:669722/35‑1 (MQ=255) gCTGGGATATTTTACTGGCAGGGGGGGCCTCGccc > 1:6967713/1‑34 (MQ=12) cTGGGATATTTTACTGGCAGGTACGGCCTGGCCAg < 1:19494777/35‑1 (MQ=255) tGGGATATTTTACTGGCAGGTACGGCCTGGCCAgg < 1:12261018/35‑1 (MQ=255) tGGGATATTTTACTGGCAGGTACGGCCTGGCCAgg < 1:5654776/35‑1 (MQ=255) gggATATTTTACTGGCAGGTACGGCCTGGCCAGGt < 1:8518417/35‑1 (MQ=255) | TGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCCAGGT > REL606/2316712‑2316779 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |