Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 4,110,237 | IS150 (–) +3 bp | 100% | coding (296‑298/2433 nt) | metL → | bifunctional aspartate kinase II/homoserine dehydrogenase II |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3893554 = | NA (NA) | 139 (1.480) | 43/44 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 4110237 = | 0 (0.000) | coding (296/2433 nt) | metL | bifunctional aspartate kinase II/homoserine dehydrogenase II | |||||
* | ? | REL606 | = 3894996 | NA (NA) | 79 (0.770) | 28/48 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 4110239 | 0 (0.000) | coding (298/2433 nt) | metL | bifunctional aspartate kinase II/homoserine dehydrogenase II |
Only 100 of 353 total aligned reads displayed.
GGTCTGCTACCCGCTGAAGAAGCCGATAGCCTCATTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGCG > REL606/4110203‑4110271 | ggTCTGCTACCCGCTGAAGAAGCCGATANNCTCNn > 1:19351843/1‑35 (MQ=255) ggTCTGCTACCCGCTGAAGAAGCCGATAGCCTCAt > 1:3144095/1‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacat < 1:14051714‑M2/1‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacat < 1:11993754‑M2/1‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacat > 1:11878829‑M2/35‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacat > 1:11287465‑M2/35‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacat < 1:9156015‑M2/1‑1 (MQ=255) gTCTGCTACCCGCTGAAGAAGCCGATAGCCTCAtt > 1:7969536/1‑35 (MQ=255) gTCTGCTACCCGCTGAAGAAGCCGATAGCCCCAtt > 1:7814923/1‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacatt > 1:11648873‑M2/34‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacatt < 1:2833949‑M2/2‑1 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacattg > 1:8433771‑M2/33‑34 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaTTAg < 1:9529327‑M2/4‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTAgc > 1:16253357‑M2/31‑35 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTAgc < 1:19863167‑M2/5‑1 (MQ=255) tGCTACCCGCTGAAGAAGCCGATAGCCTCATTAtg < 1:9600947‑M2/35‑3 (MQ=255) tGCTACCCGCTGAAGAAGCCGATAGCCTCATTAtg < 1:1610938‑M2/35‑3 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaTTAgcg < 1:569383‑M2/6‑1 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaTTAgcg > 1:10828914‑M2/30‑35 (MQ=255) catcgtccaacaaaatgggtgcagtacaTTAgcgc > 1:7252299‑M2/29‑35 (MQ=255) catcgtccaacaaaatgggtgcagtacaTTAgcgc > 1:6420449‑M2/29‑35 (MQ=255) cTACCCGCTGAAGAAGCCGATAGCCTCATTAtgta < 1:5040129‑M2/35‑5 (MQ=255) atcgtccaacaaaatgggtgcagtacaTTAGCGCt > 1:887095‑M2/28‑35 (MQ=255) atcgtccaacaaaatgggtgcagtacaTTAGCGCt < 1:9817614‑M2/8‑1 (MQ=255) tcgtccaacaaaatgggtgcagtacaTTAGCGCtt < 1:16844177‑M2/9‑1 (MQ=255) aCCCGCTGAAGAAGCCGATAGCCTCATTAtgtact < 1:14271990‑M2/35‑7 (MQ=255) aCCCGCTGAAGAAGCCGATAGCCTCATTAtgtact < 1:6717374‑M2/35‑7 (MQ=255) gtccaacaaaatgggtgcagtacaTTAGCGCtttt < 1:17011524‑M2/11‑1 (MQ=255) gtccaacaaaatgggtgcagtacaTTAGCGCtttt < 1:10938460‑M2/11‑1 (MQ=255) tccaacaaaatgggtgcagtacaTTAGCGCTTTTg > 1:17520121‑M2/24‑35 (MQ=255) ccaacaaaatggttgcagtacaTTAGCGCTTTTGt > 1:17792633‑M2/23‑35 (MQ=255) ccaacaaaatgggtgcagtacaTTAGCGCTTTTGt < 1:310928‑M2/13‑1 (MQ=255) ccaacaaaatgggtgcagtacaTTAGCGCTTTTGt > 1:12116777‑M2/23‑35 (MQ=255) ccaacaaaatgggtgcagtacaTTAGCGCTTTTGt > 1:10598415‑M2/23‑35 (MQ=255) caacaaaatgggtgcagtacaTTAGCGCTTTTGTc > 1:13475766‑M2/22‑35 (MQ=255) caacaaaatgggtgcagtacaTTAGCGCTTTTGTc < 1:17678561‑M2/14‑1 (MQ=255) aacaaaatgggtgcagtacaTTAGCGCTTTTGTCa > 1:9254554‑M2/21‑35 (MQ=255) aacaaaatgggtgcagtacaTTAGCGCTTTTGTCa > 1:10016796‑M2/21‑35 (MQ=255) aacaaaatgggtgcagtacaTTAGCGCTTTTGTCa < 1:11510228‑M2/15‑1 (MQ=255) acaaaatgggtgcagtacaTTAGCGCTTTTGTCAg > 1:19752379‑M2/20‑35 (MQ=255) acaaaatgggtgcagtacaTTAGCGCTTTTGTCAg < 1:18786593‑M2/16‑1 (MQ=255) caaaatgggtgcagtacaTTAGCGCTTTTGTCAGc < 1:6760238‑M2/17‑1 (MQ=255) caaaatgggtgcagtacaTTAGCGCTTTTGTCAGc < 1:1659678‑M2/17‑1 (MQ=255) aagaagCCGATAGCCTCATTAtgtactgaccccaa < 1:10396128‑M2/35‑15 (MQ=255) aaaatgggtgcagtacaTTAGCGCTTTTGTCAGCg < 1:179675‑M2/18‑1 (MQ=255) aaatgggtgcagtacaTTAGCGCTTTTGTCAGCGa < 1:11253372‑M2/19‑1 (MQ=255) aatgggtgcagtacaTTAGCGCTTTTGTCAGCGAt > 1:15400137‑M2/16‑35 (MQ=255) aatgggtgcagtacaTTAGCGCTTTTGTCAGCGAt < 1:5621057‑M2/20‑1 (MQ=255) aatgggtgcagtacaTTAGCGCTTTTGTCAGCGAt < 1:3739573‑M2/20‑1 (MQ=255) agCCGATAGCCTCATTAtgtactgaccccaaaaag < 1:16401521‑M2/35‑19 (MQ=255) tgggtgcagtacaTTAGCGCTTTTGTCAGCGATCt < 1:4196885‑M2/22‑1 (MQ=255) tgggtgcagtacaTTAGCGCTTTTGTCAGCGATCt > 1:1871137‑M2/14‑35 (MQ=255) gCCGATAGCCTCATTAtgtactgaccccaaaaagt < 1:15506107‑M2/35‑20 (MQ=255) gggtgcagtacaTTAGCGCTTTTGTCAGCGATCTg < 1:10487392‑M2/23‑1 (MQ=255) ccGATAGCCTCATTAtgtactgaccccaaaaagtt < 1:7483958‑M2/35‑21 (MQ=255) ccGATAGACTCATTAtgtactgaccccaaaaagtt > 1:14493390‑M2/1‑15 (MQ=255) ggtgcagtacaTTAGCGCTTTTGTCAGCGATCTgg > 1:12723312‑M2/12‑35 (MQ=255) ggtgcagtacaTTAGCGCTTTTGTCAGCGATCTgg < 1:13909737‑M2/24‑1 (MQ=255) cGATAGCCTCATTAtgtactgaccccaaaaagttg < 1:17121617‑M2/35‑22 (MQ=255) gtgcagtacaTTAGCGCTTTTGTCAGCGATCTGGa > 1:7599620‑M2/11‑35 (MQ=255) gtgcagtacaTTAGCGCTTTTGTCAGCGATCTGGa > 1:6133156‑M2/11‑35 (MQ=255) gtgcagtacaTTAGCGCTTTTGTCAGCGATCTGGa < 1:15022199‑M2/25‑1 (MQ=255) gtgcagtacaTTACCGCTTTTGTCAGCGATCTGGa > 1:12388464‑M2/11‑35 (MQ=255) tgcagtacaTTAGCGCTTTTGTCAGCGATCTGGaa < 1:19382616‑M2/26‑1 (MQ=255) tgcagtacaTTAGCGCTTTTGTCAGCGATCTGGaa > 1:10647483‑M2/10‑35 (MQ=255) tgcagtacaTTAGCGCTTTTGTCAGCGATCTGGaa > 1:12976370‑M2/10‑35 (MQ=255) tgcagtacaTTAGCGCTTTTGTCAGCGATCTGGaa < 1:2374365‑M2/26‑1 (MQ=255) gtaGCCTCATTAtgtactgaccccaaaaagttgga > 1:20325980‑M2/2‑12 (MQ=255) aTAGCCTCATTAtgtactgaccccaaaaagttgga < 1:13149184‑M2/35‑24 (MQ=255) tAGCCTCATTAtgtactgaccccaaaaagttggac > 1:12843745‑M2/1‑11 (MQ=255) tAGCCTCATTAtgtactgaccccaaaaagttggac < 1:20070594‑M2/35‑25 (MQ=255) tAGCCTCATTAtgtactgaccccaaaaagttggac > 1:3478333‑M2/1‑11 (MQ=255) gcagtacaTTAGCGCTTTTGTCAGCGATCTGGAAc > 1:9291880‑M2/9‑35 (MQ=255) gcagtacaTTAGCGCTTTTGTCAGCGATCTGGAAc < 1:18258111‑M2/27‑1 (MQ=255) cagtacaTTAGCGCTTTTGTCAGCGATCTGGAACg < 1:10201347‑M2/28‑1 (MQ=255) cagtacaTTAGCGCTTTTGTCAGCGATCTGGAACg < 1:13631404‑M2/28‑1 (MQ=255) gCCTCATTAtgtactgaccccaaaaagttggacag > 1:20144540‑M2/1‑9 (MQ=255) gCCTCATTAtgtactgaccccaaaaagttggacag > 1:19513236‑M2/1‑9 (MQ=255) gtacaTTAGCGCTTTTGTCAGCGATCTGGAACGcc < 1:810302‑M2/30‑1 (MQ=255) ccTCATTAtgtactgaccccaaaaagttggacagt < 1:2576815‑M2/35‑28 (MQ=255) ccTCATTAtgtactgaccccaaaaagttggacagt < 1:15810312‑M2/35‑28 (MQ=255) tacaTTAGCGCTTTTGTCAGCGATCTGGAACTCCt > 1:8664367‑M2/5‑35 (MQ=255) cTCATTAtgtactgaccccaaaaagttggacagtt < 1:13655515‑M2/35‑29 (MQ=255) cTCATTAtgtactgaccccaaaaagttggacagtt > 1:1919399‑M2/1‑7 (MQ=255) acaTTAGCGCTTTTGTCAGCGATCTGGAACGCCTg < 1:15070914‑M2/32‑1 (MQ=255) acaTTAGCGCTTTTGTCAGCGATCTGGAACGCCTg < 1:3565239‑M2/32‑1 (MQ=255) cATTAtgtactgaccccaaaaagttggacagttaa < 1:7902151‑M2/35‑31 (MQ=255) cATTAtgtactgaccccaaaaagttggacagttaa < 1:18133471‑M2/35‑31 (MQ=255) cATTAtgtactgaccccaaaaagttggacagttaa > 1:3871059‑M2/1‑5 (MQ=255) cATTAtgtactgaccccaaaaagttggacagttaa > 1:5366118‑M2/1‑5 (MQ=255) cATTAtgtactgaccccaaaaagttggacagttaa < 1:5282535‑M2/35‑31 (MQ=255) cATTAtgtactgaccccaaaaagttggacagttaa < 1:17423695‑M2/35‑31 (MQ=255) aTTAtgtactgaccccaaaaagttggacagttaaa > 1:4623590‑M2/1‑4 (MQ=255) aTTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGc < 1:1944114‑M2/34‑1 (MQ=255) ttAtgtactgaccccaaaaagttggacagttaaac < 1:14622383‑M2/35‑33 (MQ=255) ttAtgtactgaccccaaaaagttggacagttaaac < 1:20518981‑M2/35‑33 (MQ=255) ttAtgtactgacccaaaaaagttggacagttaaac > 1:14791968‑M2/1‑3 (MQ=255) ttAGCGCTTTTGTCAGCGATCTGGAACGCCTggcg > 1:5866010/1‑35 (MQ=255) ttAGCGCTTTTGTCAGCGATCTGGAACGCCTggcg < 1:2706230/35‑1 (MQ=255) ttAGCGCTTTTGTCAGCGATCTGGAACGCCTggcg < 1:4397254/35‑1 (MQ=255) | GGTCTGCTACCCGCTGAAGAAGCCGATAGCCTCATTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGCG > REL606/4110203‑4110271 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |