New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2908068 = | 60 (0.580) | 9 (0.110) | 4/38 | NT | 14.3% | coding (999/2871 nt) | xdhD | fused predicted xanthine/hypoxanthine oxidase: molybdopterin‑binding subunit/Fe‑S binding subunit |
? | REL606 | 4123539 = | 60 (0.740) | coding (903/1080 nt) | frwC | predicted enzyme IIC component of PTS |
Only 100 of 112 total aligned reads displayed.
TTGCTGGTGCGCCAGATACTCTGGAAGACGATAACAGCCATGCAGCCCAGCGCGGCGAGCATATGATCA > REL606/2908034‑2908102 | gccttcaaccaccggcagcacaatcagaccacccc < 1:18931786‑M1/1‑1 (MQ=255) gccttcaaccaccggcagcacaatcagaccacccc < 1:10688388‑M1/1‑1 (MQ=255) tGCTGGTGCTCCAGATACTCTGGAAGACGATAACa > 1:1359027/1‑35 (MQ=255) tGCTGGTGCGCCAGATACTCTGGAAGACGATAACa > 1:9548769/1‑35 (MQ=255) tGCTGGTGCGCCAGATACTCTGGAAGACGATAACa > 1:9738892/1‑35 (MQ=255) tGCTGGTGCGCCAGATACTCTGGAAGACGATAACa < 1:16216038/35‑1 (MQ=255) tGCGGGTGCGCCAGATACTCTGGAAGACGATAACa < 1:3176232/35‑1 (MQ=255) ccttcaaccaccggcagcacaatcagaccaccccc < 1:5570951‑M1/2‑2 (MQ=255) ccttcaaccaccggcagcacaatcagaccacccCa < 1:15681008‑M1/2‑1 (MQ=255) gCTGGTGCGCCAGATACTCTGGAAGACGATAACAg < 1:3469853/35‑1 (MQ=255) cTGGTGCGCCAGATACTCTGGAAGACGATAACAGc > 1:16415431/1‑35 (MQ=255) cTGGTGCGCCAGATACTCTGGAAGACGATAACAGc > 1:1969430/1‑35 (MQ=255) cTGGTGCGCCAGATACTCTGGAAGACGATAACAGc > 1:2911883/1‑35 (MQ=255) tcaaccaccggcagcacaatcagaccacccCAGcc < 1:15945418‑M1/5‑1 (MQ=255) tcaaccaccggcagcacaatcagaccacccCAGcc < 1:12598617‑M1/5‑1 (MQ=255) tGGTGCGCCAGATAGTCTGGAAGACGATAAAAGcc > 1:8640989/1‑35 (MQ=37) ggTGCGCCAGATACTCTGGAAGACGATAACAGCCa > 1:16638845/1‑35 (MQ=255) ggTGCGCCAGATACTCTGGAAGACGATAACAGCCa > 1:5473063/1‑35 (MQ=255) caaccaccggcaggacaatcagaccacccCAgccc < 1:2240971‑M1/6‑2 (MQ=255) gTGCGCCAGATACTCTGGAAGACGATAACAGCCAt > 1:4462326/1‑35 (MQ=255) gTGCGCCAGATACTCTGGAAGACGATAACAGCCAt > 1:3003866/1‑35 (MQ=255) gTGCGCCAGATACTCTGGAAGACGATAACAGCCAt > 1:1191486/1‑35 (MQ=255) gcgcCAGATACTCTGGAAGACGATAACAGCCATGc > 1:4445523/1‑35 (MQ=255) gcCAGATACTCTGGAAGACGATAACAGCCATGCAg > 1:5758083/1‑35 (MQ=255) gcCAGATACTCTGGAAGACGATAACAGCCATGCAg > 1:5754999/1‑35 (MQ=255) gcCAGATACTCTGGAAGACGATAACAGCCATGCAg > 1:1069744/1‑35 (MQ=255) gcCAGATACTCTGGAAGACGATAACAGCCATGCAg > 1:16320912/1‑35 (MQ=255) gcCAGATACTCTGGAAGACGATAACAGCCATGCAg > 1:3590885/1‑35 (MQ=255) ccAGATACTCTGGAAGACGATAACAGCCATGCAGc > 1:14706764/1‑35 (MQ=255) ccAGATACTCTGGAAGACGATAACAGCCATGCAGc > 1:19946573/1‑35 (MQ=255) cAGATACTCTGGAAGACGATAACAGCCATGCAGcc > 1:18305789/1‑35 (MQ=255) cAGATACTCTGGAAGACGATAACAGCCATGCAGcc > 1:16810235/1‑35 (MQ=255) cAGATACTCTGGAAGACGATAACAGCCATGCAGcc > 1:1670217/1‑35 (MQ=255) aGATACTCTTGAAGACGATAACAGCCATGCAGccc > 1:17529798/1‑35 (MQ=255) aGATACTCTGGAAGACGATAACAGCCATGCAGccc > 1:3643421/1‑35 (MQ=255) aGATACTCTGGAAGACGATAACAGCCATGCAGccc > 1:5519078/1‑35 (MQ=255) gATACTCTGGAAGACGATAACAGCCATGCAGCCCa > 1:9236436/1‑35 (MQ=255) aTACTCTGGAAGACGATAACAGCCATGCAGCCCAg > 1:7438494/1‑35 (MQ=255) aTACTCTGGAAGACGATAACAGCCATGCAGCCCAg > 1:6656175/1‑35 (MQ=255) tACTCTGGAAGACGATAACAGCCATGCAGCCCAgc > 1:16906120/1‑35 (MQ=255) tACTCTGGAAGACGATAACAGCCATGCAGCCCAgc > 1:10102330/1‑35 (MQ=255) aCTCTGGAAGACGATAACAGCCATGCAGCCCAgcg > 1:4716511/1‑35 (MQ=255) aCTCTGGAAGACGATAACAGCCATGCAGCCCAgcg > 1:9919973/1‑35 (MQ=255) aCTCTGGAAGACGATAACAGCCATGCAGCCCAgcg > 1:18608947/1‑35 (MQ=255) aCTCTGGAAGACGATAACAGCCATGCAGCCCAgcg > 1:12789511/1‑35 (MQ=255) ctctGGAAGACGATAACAGCCATGCAGCCCAgcgc > 1:15332130/1‑35 (MQ=255) ctctGGAAGACGATAACAGCCATGCAGCCCAgcgc > 1:7774998/1‑35 (MQ=255) ctctGAAAGACGATAAAAGCCATGCAGCCCAgcgc < 1:2390421/35‑1 (MQ=25) tctGGAAGACGATAACAGCCATGCAGCCCAGcgcg > 1:9181894/1‑35 (MQ=255) tctGGAAGACGATAACAGCCATGCAGCCCAGcgcg > 1:8126875/1‑35 (MQ=255) ctGGAAGACGATAACAGCCATGCAGCCCAGCgcgg > 1:10827096/1‑35 (MQ=255) ctGGAAGACGATAACAGCCATGCAGCCCAGCgcgg > 1:14975173/1‑35 (MQ=255) ctGGAAGACGATAACAGCCATGCAGCCCAGCgcgg > 1:7003109/1‑35 (MQ=255) ctGGAAGACGATAACAGCCATGCAGCCCAGCgcgg > 1:19290709/1‑35 (MQ=255) tGGAAGACGATAACAGCCATGCAGCCCAGCgtggc > 1:345407/1‑35 (MQ=255) tGGAAGACGATAACAGCCATGCAGCCCAGCgcggc > 1:6126695/1‑35 (MQ=255) tGGAAGACGATAACAGCCATGCAGCCCAGCgcggc > 1:7800129/1‑35 (MQ=255) tGGAAGACGATAACAGCCATGCAGCCCAGCgcggc > 1:6577716/1‑35 (MQ=255) ggAAGACGATAACAGCCATGCAGCCCAGCgcggcg > 1:19794673/1‑35 (MQ=255) gAAGACGATAACAGCCATGCAGCCCAGCGCGGCGa > 1:2934702/1‑35 (MQ=255) gAAGACGATAACAGCCATGCAGCCCAGCGCGGCGa > 1:15822275/1‑35 (MQ=255) aaGACGATAACAGCCATGCAGCCCAGCGCGGCGAg > 1:2705107/1‑35 (MQ=255) aaGACGATAACAGCCATGCAGCCCAGCGCGGCGAg > 1:5345856/1‑35 (MQ=255) agaccacccCAGCCATGCAGCCCAGCGCGGCGAGc > 1:6946370‑M1/10‑35 (MQ=255) agaccacccCAGCCATGCAGCCCAGCGCGGCGAGc > 1:14490603‑M1/10‑35 (MQ=255) aGACGATAACAGCCATGCAGCCCAGCGCGGCGAGc > 1:6547579/1‑35 (MQ=255) gcccacccCAGCCATGCAGCCCAGCGCGGCGAGCa > 1:20451376‑M1/9‑35 (MQ=255) gaccacccCAGCCATGCAGCCCAGCGCGGCGAGCa > 1:1812695‑M1/9‑35 (MQ=255) acccacccCAGCCATGCAGCCCAGCGCGGCGAGCa > 1:5216672‑M1/9‑35 (MQ=255) accacccCAGCCATGCAGCCCAGCGCGGCGAGCat > 1:6489377‑M1/8‑35 (MQ=255) aCGATAACAGCCATGCAGCCCAGCGCGGCGAGCat > 1:9922491/1‑35 (MQ=255) aCGATAACAGCCATGCAGCCCAGCGCGGCGAGCat > 1:11002825/1‑35 (MQ=255) aCGATAACAGCCATGCAGCCCAGCGCGGCGAGCat > 1:12502027/1‑35 (MQ=255) aCGATAACAGCAATGCAGCCCAGCGCGGAGAGCat < 1:9744614/35‑1 (MQ=37) ccccccCAGCCATGCAGCCCAGCGCGGCGAGCata > 1:6422195‑M1/7‑35 (MQ=255) ccccccCAGCCATGCAGCCCAGCGCGGCGAGCata > 1:19978475‑M1/7‑35 (MQ=255) cGATAACAGCCATGCAGCCCAGCGCGGCGAGCata > 1:10392218/1‑35 (MQ=255) cGATAACAGCCATGCAGCCCAGCGCGGCGAGCata > 1:12515903/1‑35 (MQ=255) cGATAACAGCCATGCAGCCCAGCGCGGCGAGCata > 1:6585451/1‑35 (MQ=255) gATAACAGCCATGCAGCCCAGCGCGGCGAGCatat > 1:10005747/1‑35 (MQ=255) gATAACAGCCATGCAGCCCAGCGCGGCGAGCatat > 1:3016165/1‑35 (MQ=255) gATAACAGCCATGCAGCCCAGCGCGGCGAGCatat > 1:8596942/1‑35 (MQ=255) gATAACAGCCATGCAGCCCAGCGCGGCGAGCatat > 1:8450961/1‑35 (MQ=255) cccccCAGCCATGCAGCCCAGCGCGGCGAGCatat > 1:2542602‑M1/6‑35 (MQ=255) aacccCAGCCATGCAGCCCAGCGCGGCGAGCatat > 1:1289339‑M1/6‑35 (MQ=255) ccccCAGCCATGCAGCCCAGCGCGGCGAGCATATg > 1:302204‑M1/5‑35 (MQ=255) ccccCAGCCATGCAGCCCAGCGCGGCGAGCATATg > 1:4947699‑M1/5‑35 (MQ=255) ccccCAGCCATGCAGCACAGCGCGGCGAGCATATg > 1:9048373‑M1/5‑35 (MQ=255) aTAACAGCCATGCAGCCCAGCGCGGCGAGCATATg > 1:14029212/1‑35 (MQ=255) aTAACAGCCATGCAGCCCAGCGCGGCGAGCATATg > 1:6210992/1‑35 (MQ=255) tAACAGCCATGCAGCCCAGCGCGGCGAGCATATGa > 1:20354259/1‑35 (MQ=255) cccCAGCCATGCAGCCCAGCGCGGCGAGCATATGa > 1:15038378‑M1/4‑35 (MQ=255) cccCAGCCATGCAGCCCAGCGCGGCGAGCATATGa > 1:19002858‑M1/4‑35 (MQ=255) ccCAGCCATGCAGCCCAGCGCGGCGAGAATATGat > 1:17598773‑M1/3‑35 (MQ=255) atCAGCCATGCAGCCCAGCGCGGCGAGCATATGat < 1:20152975‑M1/33‑1 (MQ=255) aaCAGCCATGCAGCCCAGCGCGGCGAGCATATGat > 1:4298756/1‑35 (MQ=255) tCAGCCATGCAGCCCAGCGCGGCGAGCATATGatc > 1:12498851‑M1/2‑35 (MQ=255) cCAGCCATGCAGCCCAGCGCGGCGAGCATATGatc > 1:15615705‑M1/2‑35 (MQ=255) CAGCCATGCAGCCCAGCGCGGCGAGCATATGatca > 1:13136438‑M1/1‑35 (MQ=255) CAGCCATGCAGCCCAGCGCGGCGAGCATATGatca > 1:12263865‑M1/1‑35 (MQ=255) | TTGCTGGTGCGCCAGATACTCTGGAAGACGATAACAGCCATGCAGCCCAGCGCGGCGAGCATATGATCA > REL606/2908034‑2908102 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |