New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1539621 = | 78 (0.760) | 8 (0.100) | 4/38 | NT | 13.6% | coding (51/2400 nt) | dos | cAMP phosphodiesterase, heme‑regulated |
? | REL606 | = 3363882 | 40 (0.490) | coding (771/1290 nt) | rrmB | 16S rRNA m5C967 methyltransferase, S‑adenosyl‑L‑methionine‑dependent |
CATTTTTTTCCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1539636‑1539621 ‑‑‑‑‑‑‑‑‑‑‑ccgccGGGGGCGGCACAAAGATCCAAAATGTGTTCACCG < REL606/3363882‑3363849 ttTTTTTTTCCCCGCCGGGGGCGGCACAAAGATCC < 1:16714079/33‑1 gcTTTTTTTCCCCGCCGGGGGCGGCACAAAGATCC < 1:13586159/33‑1 TTTTTTTCCCCGCCGGGGGCGGCACAAAGATCCAA < 1:8707507/35‑1 ttgTTTCCCCGCCGGGGGCGGCACAAAGATCCAAA < 1:15364491/32‑1 TTTTTTCCCCGCCGGGGGCGGCACAAAGATCCAAA < 1:20202255/35‑1 TTTTTTCCCCGCCGGGGGCGGCACAAAGATCCAAA < 1:527614/35‑1 TTTTTCCCCGCCGGGGGCGGCACAAAGATCCAAAA < 1:18958961/35‑1 TTTTTCCCCGCCGGGGGCGGCACAAAGATCCAAAA < 1:16223364/35‑1 TTTTCCCCGCCGGGGGCGGCACAAAGATCCAAAAT < 1:2635236/35‑1 CCCGCCGGGGGCGGCACAAAGATCCAAAATGTGTT < 1:8532131/35‑1 CCCGCCGGGGGCGGCACAAAGATCCAAAATGTGTT < 1:11898487/35‑1 CCGCCGGGGGCGGCACAAAGATCCAAAATGTGTTC < 1:18136557/35‑1 CCGCCGGGGGCGGCACAAAGATCCAAAATGTGTTC < 1:19729640/35‑1 CGCCGGGGGCGGCACAAAGATCCAAAATGTGTTCA < 1:4148125/35‑1 CGCCGGGGGCGGCACAAAGATCCAAAATGTGTTCA < 1:11383578/35‑1 GCCGGGGGCTGCACAAAGATCCAAAATGTGTTCAC > 1:5518761/1‑35 GCCGGGGGCGGCACAAAGATCCAAAATGTGTTCAC > 1:9953363/1‑35 GCCGGGGGCGGCACAAAGATCCAAAATGTGTTCAC < 1:10184431/35‑1 CCGGGGGCGGCACAAAGATCCAAAATGTGTTCACC < 1:19526442/35‑1 CCGGGGGCGGCACAAAGATCCAAAATGTGTTCACC > 1:4610040/1‑35 CCGGGGGCGGCACAAAGATCCAAAATGTGTTCACC < 1:13307573/35‑1 CGGGGGCGGCACAAAGATCCAAAATGTGTTCACCG < 1:18748705/35‑1 CGGGGGCGGCACAAAGATCCAAAATGTGTTCACCG < 1:17123629/35‑1 CGGGGGCGGCACAAAGATCCAAAATGTGTTCACCG > 1:8033970/1‑35 CGGGGGCGGCACAAAGATCCAAAATGTGTTCACCG > 1:10368893/1‑35 CATTTTTTTCCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1539636‑1539621 ‑‑‑‑‑‑‑‑‑‑‑ccgccGGGGGCGGCACAAAGATCCAAAATGTGTTCACCG < REL606/3363882‑3363849 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |