New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2750665 = | 112 (1.090) | 16 (0.250) | 4/30 | NT | 22.7% | coding (1468/2079 nt) | fhlA | DNA‑binding transcriptional activator |
? | REL606 | 3792209 = | 39 (0.610) | coding (315/414 nt) | ECB_03532 | hypothetical protein |
Only 100 of 237 total aligned reads displayed.
CCTCGACGAAGTGGGCGATATGCCACTGGAGTTACAGCCGAAGTTGCTGCGTGTATTGCAGGAACAGGA > REL606/2750631‑2750699 | ccTCGACGAAGTGGGCGATATGCCACTGGAGTTAc > 1:5527687/1‑35 (MQ=255) ccTCGACGAAGTGGGCGATATGCAACTGGAGTTAc < 1:18326891/35‑1 (MQ=255) cTCGACGAAGTGGGCGATATGCCACTGGAGTTACa < 1:2383294/35‑1 (MQ=255) cTCGACGAAGTGGGCGATATGCCACTGGAGTTACa < 1:13378008/35‑1 (MQ=255) cTCGACGAAGTGGGCGATATGCCACTGGAGTTACa > 1:8950690/1‑35 (MQ=255) cTCGACGAAGTGGGCGATATGCCACTGGAGTTACa < 1:1704894/35‑1 (MQ=255) cTCGACGAAGTGGGCGATATGCCACTGGAGTTACa > 1:12943377/1‑35 (MQ=255) cTCGACGAAGTGGGCGATATGCCACTGGAGTTACa < 1:18384085/35‑1 (MQ=255) cTCGACGAAGTGGGCGATATGCCACTGGAGTTACa > 1:685268/1‑35 (MQ=255) cTCGACGAAGTGGGCGATATGCCACTGGAGTTACa < 1:4161358/35‑1 (MQ=255) cTCGACGAAGTGGGCGATATGCCACTGGAGTTACa < 1:19069737/35‑1 (MQ=255) cTCGACGAAGTGGGCGATATGCCACTGGAGTTACa < 1:11854147/35‑1 (MQ=255) tCGACGAAGTGGGCGATATGCCACTGGAGTTACAg < 1:9371117/35‑1 (MQ=255) tCGACGAAGTGGGCGATATGCCACTGGAGTTACAg < 1:19549081/35‑1 (MQ=255) tCGACGAAGTGGGCGATATGCCACTGGAGTTACAg < 1:16532227/35‑1 (MQ=255) tCGACGAAGTGGGCGATATGCCACTGGAGTTACAg < 1:10833013/35‑1 (MQ=255) tCGACGAAGTGGGCGATATGCCACTGGAGTTACAg < 1:6422011/35‑1 (MQ=255) tCGACGAAGTGGGCGATATGCCACTGGAGTTACAg < 1:2103157/35‑1 (MQ=255) tCGACGAAGTGGGCGATATGCCACTGGAGTTACAg < 1:13692990/35‑1 (MQ=255) tCGACGAAGTGGGCGATATGCCACTGGAGTTACAg < 1:16154100/35‑1 (MQ=255) tCGACGAAGTGGGCGATATGCCACTGGAGTTACAg < 1:13949181/35‑1 (MQ=255) tCGACGAAGTGGGCGATATGCCACTGGAGTTACAg < 1:14120281/35‑1 (MQ=255) cgacgaAGTGGGCGATATGCCACTGGAGTTACAGc < 1:14937248/35‑1 (MQ=255) cgacgaAGTGGGCGATATGCCACTGGAGTTACAGc > 1:16255054/1‑35 (MQ=255) cgacgaAGTGGGCGATATGCCACTGGAGTTACAGc < 1:19394150/35‑1 (MQ=255) cgacgaAGTGGGCGATATGCCACTGGAGTTACAGc < 1:12260174/35‑1 (MQ=255) cgacgaAGTGGGCGATATGCCACTGGAGTTAAAgg > 1:5213260/1‑34 (MQ=255) gacgaAGTGGGCGATATGCCACTGGAGTTACAGcc > 1:8785141/1‑35 (MQ=255) gacgaAGTGGGCGATATGCCACTGGAGTTACAGcc > 1:5981638/1‑35 (MQ=255) acgaAGTGGGCGATATGCCACTGGAGTTACAGCCg > 1:2194202/1‑35 (MQ=255) acgaAGTGGGCGATATGCCACTGGAGTTACAGCCg > 1:847973/1‑35 (MQ=255) cgaAGTGGGCGATATGCCACTGGAGTTACAGCCGa > 1:12226187/1‑35 (MQ=255) cgaAGTGGGCGATATGCCACTGGAGTTACAGCCGa > 1:441739/1‑35 (MQ=255) ataaccatatggatcgatttcccccaccCAGCCGa < 1:19013258‑M1/7‑1 (MQ=255) taaccatatggatcgatttcccccaccCAGCCGaa < 1:18615751‑M1/8‑1 (MQ=255) gaAGTGGGCGATATGCCACTGGAGTTACAGCCGaa > 1:1380332/1‑35 (MQ=255) aaGTGGGCGATATGCCACTGGAGTTACAGCCGAAg > 1:3432655/1‑35 (MQ=255) aaGTGGGCGATATGCCACTGGAGTTACAGCCGAAg > 1:5911493/1‑35 (MQ=255) aaGTGGGCGATATGCCACTGGAGTTACAGCCGAAg > 1:9281836/1‑35 (MQ=255) gTGGGCGATATGCCACTGGAGTTACAGCCGAAggt > 1:4706414/1‑33 (MQ=255) gTGGGCGATATGCCACTGGAGTTACAGCCGAAggt > 1:11541286/1‑33 (MQ=255) tGGGCGATATGCCACTGTAGTTACAGCCGAAGGtg > 1:14353138/1‑35 (MQ=37) tGGGCGATATGCCACTGGAGTTACAGCCGAAGtcg > 1:20301254/1‑33 (MQ=255) tGGGCGATATGCCACTGGAGTTACAGCCGAAGTtg > 1:10157496/1‑35 (MQ=255) tGGGCGATATGCCACTGGAGTTACAGCCGAAGGtg > 1:18686326/1‑35 (MQ=255) gggCGATATGCCACTGGAGTTACAGCCGAAGTtgc > 1:12846366/1‑35 (MQ=255) gggCGATATGCCACTGGAGTTACAGCCGAAGTtgc > 1:3390708/1‑35 (MQ=255) gggCGATATGCCACTGGAGTTACAGCCGAAGGtgc > 1:1552464/1‑35 (MQ=255) gCGATATGCCACTGGAGTTACAGCCGAAGGtgctg > 1:19051298/1‑35 (MQ=255) cGATATGCCACTGGAGTTACAGCCGAAGTtgctgc > 1:14770248/1‑35 (MQ=255) gATATGCCACTGGAGTTACAGCCGAAGTTGCTGCg > 1:13546930/1‑35 (MQ=255) gATATGCCACTGGAGTTACAGCCGAAGTTGCTGCg > 1:18847235/1‑35 (MQ=255) gATATGCCACTGGAGTTACAGCCGAAGTTGCTGCg > 1:5868220/1‑35 (MQ=255) gATATGCCACTGGAGTTACAGCCGAAGGTGCTTCg > 1:20432093/1‑35 (MQ=38) atatGCCACTGGAGTTACAGCCGAAGTTGCTGCgg > 1:1197390/1‑34 (MQ=255) atatGCCACTGGAGTTACAGCCGAAGTTGCTGCgg > 1:3719123/1‑34 (MQ=255) atatGCCACTGGAGTTACAGCCGAAGGTGCTGCgt > 1:6175536/1‑35 (MQ=255) atGCCACTGGAGTTACAGCCTAAGTTGCTGCgtgt > 1:16212891/1‑35 (MQ=255) atGCCACTGGAGTTACAGCCGAAGTTGCTGCgtgt > 1:1816336/1‑35 (MQ=255) atGCCACTGGAGTTACAGCCGAAGTTGCTGCgtgt > 1:4666484/1‑35 (MQ=255) atGCCACTGGAGTTACAGCCGAAGTTGCTGCgtgt > 1:20314794/1‑35 (MQ=255) atGCCACTGGAGTTACAGCCGAAGTTGCTGCgggt > 1:8421992/1‑35 (MQ=255) gCCACTGGAGTTACAGCCGAAGGTGCTGCGTGTAt > 1:16034370/1‑35 (MQ=255) ccACTGGAGTTACATCCGAAGTTGCTGCGTGTAtt > 1:11314240/1‑35 (MQ=255) ccACTGGAGTTACAGCCGAAGTTGCTGCGTGTAtt > 1:5430188/1‑35 (MQ=255) ccACTGGAGTTACAGCCGAAGTTGCTGCGTGTAtt > 1:17775711/1‑35 (MQ=255) ccACTGGAGTTACAGCCGAAGTTGCTGCGTGTAtt > 1:13075838/1‑35 (MQ=255) cACTGGATTTACAGCCGAAGTTGCTGCGTGTATTg > 1:2471419/1‑35 (MQ=255) aCTGGAGTTACAGCCGAAGTTGCTGCGTGTATTGc > 1:15399224/1‑35 (MQ=255) cccccccccCAGCCGAAGTTGCTGCGTGTATTGCa > 1:11034453‑M1/10‑35 (MQ=255) cTGGAGTTACAGCCGAAGTTGCTGCGTGTATTGCa > 1:19902070/1‑35 (MQ=255) tGGATTTACAGCCGAAGTTGCTGCGTGTATTGCAg > 1:8178005/1‑35 (MQ=255) tGGAGTTACAGCCGAAGTTGCTGCGGGTATTGCAg > 1:7503234/1‑35 (MQ=255) tGGAGCTACAGCCGAAGTTGCTGCGTGGTTTGCAg > 1:15897271/1‑35 (MQ=25) gcccccccCAGCCGAAGTTGCTGCGTGTATTGCAg > 1:20130144‑M1/9‑35 (MQ=255) ccccccccCAGCCGAAGTTGCTGCGTGTATTGCAg > 1:7583785‑M1/9‑35 (MQ=255) gccccccCAGCCGAAGTTGCTGCGTGTATTGCAgg > 1:6666308‑M1/8‑35 (MQ=255) cccccccCAGCCGAAGTTGCTGCGTGTATTGCAgg > 1:7636819‑M1/8‑35 (MQ=255) cccccccCAGCCGAAGTTGCTGCGTGTATTGCAgg > 1:1977314‑M1/8‑35 (MQ=255) cccccCAGCCGAAGTTGCTGCGTGTATTGCAGGaa > 1:10455857‑M1/6‑35 (MQ=255) gtccCAGCCGAAGTTGCTGCGTGTATTGCAGGAAc > 1:14853295‑M1/5‑35 (MQ=255) ccccCAGCCGAAGTTGCTGCGTGTATTGCAGGAAc > 1:9537169‑M1/5‑35 (MQ=255) ccccCAGCCGAAGTTGCTGCGTGTATTGCAGGAAc > 1:16889909‑M1/5‑35 (MQ=255) ccccCAGCCGAAGTTGCTGCGTGTATTGCAGGAAc > 1:2714629‑M1/5‑35 (MQ=255) ttACAGCCGAAGTTGCTGCGTGTATTGCAGGAACa > 1:8250126/1‑35 (MQ=255) ttACAGACGAAGTTGCTGCGTGTATTGCAGGAACa < 1:17904441/35‑1 (MQ=255) cccCAGCCGAAGTTGCTGCGTGTATTGCAGGAACa > 1:10015394‑M1/4‑35 (MQ=255) cccCAGCCGAAGTTGCTGCGTGTATTGCAGGAACa > 1:13227504‑M1/4‑35 (MQ=255) tACAGCCGAAGTTGCTGCGTGTATTGCAGGAAAAg > 1:16337650/1‑35 (MQ=255) ccCAGCCGAAGTTGCTGCGTGTATTGCAGGAACAg > 1:6090207‑M1/3‑35 (MQ=255) ccCAGCCGAAGTTGCTGCGTGTATTGCAGGAACAg > 1:12678453‑M1/3‑35 (MQ=255) cCAGCCGAAGTTGCTGCGTGTATTGCAGGAACAgg > 1:2850767‑M1/2‑35 (MQ=255) aCAGCCGAATTTGCTGCGTGTATTGCAGGAACatg > 1:3863113/1‑33 (MQ=25) aCAGCCGAAGTTGCTGCGTGTATTGGAGGAACAgg > 1:9231394/1‑35 (MQ=255) aCAGCCGAAGTTGCTGCGTGTATTGCAGGAACAgg > 1:14603290/1‑35 (MQ=255) cAGCCGAAGTTGCTGCGTGTATTGCAGGGAAAggg > 1:15117534/1‑34 (MQ=25) CAGCCGAAGTTGCTGCGTGTATTGCAGGGACaggg < 1:629100‑M1/35‑2 (MQ=255) CAGCCGAAGTTGCTGCGTGTATTGCAGGAACAGGa < 1:7236794‑M1/35‑1 (MQ=255) CAGCCGAAGTTGCTGCGTGTATTGCAGGAACAGGa < 1:15827653‑M1/35‑1 (MQ=255) CAGCCGAAGTTGCTGCGTGTATTGCAGGAACAGGa < 1:13136562‑M1/35‑1 (MQ=255) | CCTCGACGAAGTGGGCGATATGCCACTGGAGTTACAGCCGAAGTTGCTGCGTGTATTGCAGGAACAGGA > REL606/2750631‑2750699 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |