New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 10617 = | 104 (1.010) | 21 (0.220) | 7/44 | NT | 21.3% | intergenic (‑125/+24) | yaaH/yaaW | conserved inner membrane protein associated with acetate transport/hypothetical protein |
? | REL606 | = 3622975 | 60 (0.640) | coding (1754/2619 nt) | yhjO | cellulose synthase, catalytic subunit |
ACTCAGGTCTGACACCGTAAACCGGGGAAAATTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/10652‑10617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcGCCACTCTTTCTGGAGTGAAATCTACGAAACGGT < REL606/3622975‑3622942 ACTCAGGTCTGACACCGTAAACCGGGGANNATTNN > 1:18625227/1‑35 ACTCAGGTCTGACACCGTAAACCGGGGAACATTTT < 1:681203/35‑1 ACTCAGGTCTGACACCGTAAACCGGGGAAAATTTT < 1:5760391/35‑1 ACTCAGGTCTGACACCGTAAACCGGGGAAAATTTT < 1:1845899/35‑1 ACTCAGGTCTGACACCGTAAACCGGGGAAAATTTT > 1:8466173/1‑35 ACTCAGGTCTGACACCGTAAACCGGGGAAAATTTT > 1:12671529/1‑35 ACTCAGGTCTGACACCGTAAACCGGGGAAAATTTT < 1:10353378/35‑1 ACTCAGGTCTGACACCGTAAACCGGGGAAAATTTT < 1:11927946/35‑1 ACTCAGGTCTGACACAGTAAACCGGGGAAAATTTT < 1:18689318/35‑1 CTCAGGTCTGACACCGTAAACCTGGGAAAATTTTC > 1:5615979/1‑35 CTCAGGTCTGACACCGTAAACCGGGGAAAATTTTC > 1:7118710/1‑35 ACCCGGGAAAATTTTCGCCACTCTTTCTGGAGTGA < 1:6769080/35‑1 CCGGGGAAAATTTTCGCCACTCTTTCTGGAGTGAA < 1:7508146/35‑1 CCGAGGAAAATTTTCGCCACTCTTTCTGGAGTGAA < 1:834858/35‑1 CCGAGGAAAATTTTCGCCACTCTTTCTGGAGTGAA < 1:17159400/35‑1 CGGGGAAATTTTTCGCCACTCTTTCTGGAGTGAAA < 1:13651601/35‑1 cGGGAAATTTTTCGCCACTCTTTCTGGAGTGAAAT < 1:3768284/34‑1 cGGGAAAATTTTCGCCACTCTTTCTGGAGTGAAAT < 1:19868938/34‑1 aGGGAAAATTTTCGCCACTCTTTCTGGAGTGAAAT < 1:5092523/34‑1 aGGAAAATTTTCGCCACTCTTTCTGGAGTGAAATC < 1:7390140/34‑1 aGGAAAATTTTCGCCACTCTTTCTGGAGTGAAATC < 1:10737717/34‑1 GGGAAAATTTTCGCCACTCTTTCTGGAGTGAAATC < 1:17051944/35‑1 GAAAATTTTCGCCACTCTTTCTGGAGTGAAATCTA < 1:16027961/35‑1 GAAAATTTTCGCCACTCTTTCTGGAGTGAAATCTA < 1:10903863/35‑1 gAAATTTTCGCCACTCTTTCTGGAGTGAAATCTAC < 1:16542000/34‑1 AAAATTTTCGCCACTCTTTCTGGAGTGAAATCTAC < 1:15648879/35‑1 AAAATTTTCGCCACTCTTTCTGGAGTGAAATCTAC < 1:18612228/35‑1 AAAAATTTCGCCACTCTTTCTGGAGTGAAATCTAC < 1:6098567/35‑1 tAATTTTCGCCACTCTTTCTGGAGTGAAATCTACG < 1:15618902/34‑1 aatTTTTCGCCACTCTTTCTGGAGTGAAATCTACG < 1:4953566/32‑1 AAATTTTCGCCACTCTTTCTGGAGTGAAATCTACG < 1:7923782/35‑1 AAATTTTCGCCACTCTTTCTGGAGTGAAATCTACG < 1:942644/35‑1 AAATTTTCGCCACTATTTCTGGAGTGAAATCTACG < 1:5448265/35‑1 AAAATTTCGCCACTCTTTCTGGAGTGAAATCTACG < 1:1475611/35‑1 gATTTTCGCCACTCTTTCTGGAGTGAAATCTACGA < 1:3295943/34‑1 aaaTTTCGCCACTCTTTCTGGAGTGAAATCTACGA < 1:4602214/32‑1 AATTTTCGCCACTCTTTCTGGAGTGAAATCTACGA < 1:3289514/35‑1 AATTTTCGCCACTCTTTCTGGAGTGAAATCTACGA < 1:17653632/35‑1 ATTTTCGCCACTCTTTCTGGAGTGAAATCTACGAA < 1:15147801/35‑1 ATTTTCGCCACTCTTTCTGGAGTGAAATCTACGAA < 1:1827707/35‑1 ATTTTCGCCACTCTTTCTGGAGTGAAATCTACGAA < 1:16675147/35‑1 ATTTTCGCCACTCTTTCTGGAGTGAAATCTACGAA < 1:16364700/35‑1 aTTTCGCCACTCTTTCTGGAGTGAAATCTACGAAA < 1:20338110/34‑1 TTTTCGCCACTCTTTCTGGAGTGAAATCTACGAAA < 1:4874405/35‑1 TTTTCGCCACTCTTTCTGGAGTGAAATCTACGAAA < 1:3471007/35‑1 TTTTCGCCACTCTTTCTGGAGTGAAATCTACGAAA < 1:2189055/35‑1 TTTCGCCACTCTTTCTGGAGTGAAATCTACGAAAC < 1:9783298/35‑1 TTTCGCCACTCTTTCTGGAGTGAAATCTACGAAAC < 1:8978910/35‑1 TTTCGCCACTCTTTCTGGAGTGAAATCTACGAAAC < 1:6130639/35‑1 TTTCGCCACTCTTTCTGGAGTGAAATCTACGAAAC < 1:5891703/35‑1 TTTCGCCACTCTTTCTGGAGTGAAATCTACGAAAC < 1:4517693/35‑1 TTTCGCCACTCTTTCTGGAGTGAAATCTACGAAAC < 1:1731451/35‑1 TTCGCCACTCTTTCTGGAGTGAAATCTACGAAACG < 1:6391249/35‑1 TCGCCACTCTTTCTGGAGTGAAATCTACTAAACGG > 1:11028726/1‑35 TCGCCACTCTTTCTGGAGTGAAATCTACGAAACGG < 1:6662738/35‑1 TCGCCACTCTTTCTGGAGTGAAATCTACGAAACGG > 1:6029163/1‑35 TCGCCACTCTTTCTGGAGTGAAATCTACGAAACGG < 1:12105496/35‑1 CGCCACTCTTTCTGGAGTGAAATCTACGAAACTGT > 1:3263566/1‑35 CGCCACTCTTTCTGGAGTGAAATCTACGAAACGGT > 1:7192534/1‑35 CGCCACTCTTTCTGGAGTGAAATCTACGAAACGGT < 1:1686012/35‑1 CGCCACTCTTTCTGGAGTGAAATCTACGAAACGGT > 1:13306068/1‑35 CGCCACTCTTTCTGGAGTGAAATCTACGAAACGGT > 1:12525073/1‑35 ACTCAGGTCTGACACCGTAAACCGGGGAAAATTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/10652‑10617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcGCCACTCTTTCTGGAGTGAAATCTACGAAACGGT < REL606/3622975‑3622942 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |