New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 875814 =63 (0.610)19 (0.220) 5/40 NT 23.4% coding (127/597 nt) ybjG undecaprenyl pyrophosphate phosphatase
?REL606 = 3285418 72 (0.840)coding (277/654 nt) yhbL isoprenoid biosynthesis protein with amidotransferase‑like domain

Only 100 of 142 total aligned reads displayed.

CGTTGTGCTGTAAGCCCCCACAACCAAAGTACCACGGCCAGCAACGGCACCACGGTAATCAAATCTTTA  >  REL606/875780‑875848
                                  |                                  
cGTTGTGCTGTAAGCCCCCACAACCAAAGTACCAc                                    >  1:2172817/1‑35 (MQ=255)
cGTTGTGCTGTAAGCCCCCACAACCAAAGTACCAc                                    >  1:7036486/1‑35 (MQ=255)
cGTTGTGCTGTAAGCCCCCACAACCAAAGTACCAc                                    >  1:12615504/1‑35 (MQ=255)
aattgcttaaattcttcgccgcgccaaaccccccc                                    <  1:4694345‑M1/1‑1 (MQ=255)
aattgcttaaattcttcgccgcgccaaaccccccc                                    >  1:10988355‑M1/35‑35 (MQ=255)
 gTTGTGCTGTAAGCCCCCACAACCAAAGTACCACg                                   <  1:10471179/35‑1 (MQ=255)
 gTTGTGCTGTAAGCCCCCACAACCAAAGTACCACg                                   >  1:16496831/1‑35 (MQ=255)
 gTTGTGCTGTAAGCCCCCACAACCAAAGTACCACg                                   <  1:15152728/35‑1 (MQ=255)
 gTTGTGCTGTAAGCCCCCACAACCAAAGTACCACg                                   >  1:11997101/1‑35 (MQ=255)
 attgcttaaattcttcgccgcgccaaaccccccCg                                   >  1:18066657‑M1/34‑35 (MQ=255)
 attgcttaaattcttcgccgcgccaaaccccccCg                                   <  1:14826452‑M1/2‑1 (MQ=255)
 attgcttaaattcttcgccgcgccaaaccccccCg                                   <  1:7164230‑M1/2‑1 (MQ=255)
  ttgcttaaattcttcgccgcgccaaaccccccCgg                                  >  1:3098342‑M1/33‑35 (MQ=255)
  ttgcttaaattcttcgccgcgccaaaccccccCgg                                  <  1:2216517‑M1/3‑1 (MQ=255)
  ttgcttaaattcttcgccgcgccaaaccccacCgg                                  >  1:7615931‑M1/33‑35 (MQ=255)
  ttGTGCTGTAAGCCCCCACAACCAAAGTACCACgg                                  >  1:1342683/1‑35 (MQ=255)
  ttGTGCTGTAAGCCCCCACAACCAAAGTACCACgg                                  >  1:7124342/1‑35 (MQ=255)
  ttGTGCTGTAAGCCCCCACAACCAAAGTACCACgg                                  >  1:20229692/1‑35 (MQ=255)
   tgtgCTGTAAGCCCCCACAACCAAAGTACCACGGc                                 >  1:19162172/1‑35 (MQ=255)
   tgcttaaattcttcgccgcgccaaaccccccCGGc                                 <  1:3122640‑M1/4‑1 (MQ=255)
   tgcttaaattcttcgccgcgccaaaccccccCGGc                                 <  1:11895661‑M1/4‑1 (MQ=255)
   tgcttaaattcttcgccgcgacaaaccccccCGGc                                 >  1:14664523‑M1/32‑35 (MQ=255)
    gtgCTGTAAGCCCCCACAACCAAAGTACCACGGcc                                >  1:3990772/1‑35 (MQ=255)
    gtgCTGTAAGCCCCCACAACCAAAGTACCACGGcc                                >  1:7840421/1‑35 (MQ=255)
    gtgCTGTAAGCCCCCACAACCAAAGTACCACGGcc                                >  1:16437992/1‑35 (MQ=255)
     tgCTGTAAGCCCCCACAACCAAAGTACCACGGCCa                               >  1:4636018/1‑35 (MQ=255)
     tgCTGTAAGCCCCCACAACCAAAGTACCACGGCCa                               >  1:11164942/1‑35 (MQ=255)
      gCTGTAAGCCCCCACAACCAAAGTACCACGGCCAg                              >  1:20068885/1‑35 (MQ=255)
       cTGTAAGCCCCCACAACCAAAGTACCACGGCCAGc                             >  1:58706/1‑35 (MQ=255)
       cTGTAAGCCCCCACAACCAAAGTACCACGGCCAGc                             >  1:5420410/1‑35 (MQ=255)
       cTGTAAGCCCCCACAACCAAAGTACCACGGCCAGc                             >  1:9744079/1‑35 (MQ=255)
       cTGTAAGCCCCCACAACCAAAGTACCACGGCCAGc                             >  1:8675102/1‑35 (MQ=255)
       cTGTAAGCCCCCACAACCAAAGTACCACGGCCAGc                             >  1:2934997/1‑35 (MQ=255)
         gTAAGCCCCCACAACCAAAGTACCACGGCCAGCaa                           >  1:13371120/1‑35 (MQ=255)
         gTAAGCCCCCACAACCAAAGTACCACGGCCAGCaa                           >  1:5093682/1‑35 (MQ=255)
          tAAGCCCCCACAACCAAAGTACCACGGCCAGCAAc                          >  1:6009034/1‑35 (MQ=255)
            aGCCCCCACAACCAAAGTACCACGGCCAGCAACgg                        >  1:5280246/1‑35 (MQ=255)
            aGCCCCCACAACCAAAGTACCACGGCCAGCAACgg                        >  1:16769741/1‑35 (MQ=255)
              cccccACAACCAAAGTACCACGGCCAGCAACGGca                      >  1:16861647/1‑35 (MQ=255)
               ccccACAACCAAAGTACCACGGCCAGCAACGGcac                     >  1:10743557/1‑35 (MQ=255)
               ccccACAACCAAAGTACCACGGCCAGCAACGGcac                     >  1:18547431/1‑35 (MQ=255)
               ccccACAACCAAAGTACCACGGCCAGCAACGGcac                     >  1:4572307/1‑35 (MQ=255)
                 ccACAACCAAAGTACCACGGCCAGCAACGGcacca                   >  1:8381951/1‑35 (MQ=255)
                 ccAAAACCAAACCCCCCCGGCCAGCAACGGcacca                   <  1:9428451/35‑1 (MQ=12)
                  cacaACCAAAGTACCACGGCCAGCAACGGcaccac                  >  1:18033254/1‑35 (MQ=255)
                  cacaACCAAAGTACCACGGCCAGCAACGGcaccac                  >  1:5295891/1‑35 (MQ=255)
                   acaACCAAAGTACCACGGCCAGCAACGGCACCACg                 >  1:10646598/1‑35 (MQ=255)
                    ccaccaaaccccccCGGCCAGCAACGGCACCACgg                >  1:15312708‑M1/15‑35 (MQ=255)
                    caACCAAAGTACCACTGCCAGCAACGGCACCACgg                >  1:8990102/1‑35 (MQ=255)
                    caACCAAAGTACCACGGCCAGCAACTGCACCACgg                >  1:9540650/1‑35 (MQ=255)
                    caACCAAAGTACCACGGCCAGCAACGGCACCACgg                >  1:17665717/1‑35 (MQ=255)
                     aaCCAAAGTACCACGGCCAGCAACGGCACCACGGt               >  1:5364015/1‑35 (MQ=255)
                     aaCCAAAGTACCACGGCCAGCAACGGCACCACGGt               >  1:9890308/1‑35 (MQ=255)
                     aaCCAAAGTACCACGGCCAGCAACGGCACCACGGt               >  1:10317043/1‑35 (MQ=255)
                     aaCCAAAGTACCACGGCCAGCAACGGCACCACGGt               >  1:14238148/1‑35 (MQ=255)
                     aaCCAAAGTACCACGGCCAGCAACGGCACCACGGt               >  1:16195372/1‑35 (MQ=255)
                      aCCAAAGTACCACGGCCAGCAACGGCACCACGGTa              >  1:7345869/1‑35 (MQ=255)
                      aCCAAAGTACCACGGCCAGCAACGGCACCACGGTa              >  1:19370732/1‑35 (MQ=255)
                      aCCAAAGTACCACGGCCAGCAACGGCACCACGGTa              >  1:8092752/1‑35 (MQ=255)
                       ccAAAGTACCACGGCCAGCAACGGCACCACGGTaa             >  1:8470995/1‑35 (MQ=255)
                        caaaccccccCGGCCAGCAACGGCACCACGGTAAt            >  1:9442202‑M1/11‑35 (MQ=255)
                        cAAAGTACCACGGCCAGCAACGGCACCACGGTAAt            >  1:14505773/1‑35 (MQ=255)
                        cAAAGTACCACGGCCAGCAACGGCACCACGGTAAt            >  1:13867777/1‑35 (MQ=255)
                        cAAAGTACCACGGCCAGCAACGGCACCACGGTAAt            >  1:19582941/1‑35 (MQ=255)
                        aaaaccccccCGGCCAGCAACGGCACCACGGTAAt            >  1:18119420‑M1/11‑35 (MQ=255)
                         aaaccccccCGGCCAGCAACGGCACCACGGTAATc           >  1:7648009‑M1/10‑35 (MQ=255)
                         aaaccccccCGGCCAGCAACGGCACCACGGTAATc           >  1:15285841‑M1/10‑35 (MQ=255)
                         aaaccccccCGGCCAGCAACGGCACCACGGTAATc           >  1:14925027‑M1/10‑35 (MQ=255)
                         aaaGTACCACGGCCAGCAACGGCACCACGGTAATc           >  1:6373049/1‑35 (MQ=255)
                          aagcccccCGGCCAGCAACGGCACCACGGTAATCa          >  1:9494065‑M1/9‑35 (MQ=255)
                          aaccccccCGGCCAGCAACGGCACCACGGTAATCa          >  1:7997012‑M1/9‑35 (MQ=255)
                          aaGTCCCCCGGCCAGAAACGGCACCACGGTAATCa          <  1:18616381/35‑1 (MQ=21)
                          aaGTCCCCCGGCCAGAAACGGCACCACGGTAATCa          <  1:3551828/35‑1 (MQ=21)
                          aaGTACCACGGCCAGCAACGGCACCACGGTAATCa          >  1:19168450/1‑35 (MQ=255)
                          aaGTACCACGGCCAGCAACGGCACCACGGTAATCa          >  1:13259106/1‑35 (MQ=255)
                          aaGTACCACGGCCAGCAACGGCACCACGGTAATCa          >  1:8935574/1‑35 (MQ=255)
                          aaGTACCACGGCCAGCAACGGCACCACGGTAATCa          >  1:19573303/1‑35 (MQ=255)
                           accccccCGGCCAGCAACGGCACCACGGTAATCaa         >  1:4140564‑M1/8‑35 (MQ=255)
                           aGTACCACGGCCAGCAACGGCACCACGGTAATCaa         >  1:13670977/1‑35 (MQ=255)
                           aGTACCACGGCCAGCAACGGCACCACGGTAATCaa         >  1:629437/1‑35 (MQ=255)
                            gTACCACGGCCAGCAACGGCACCACGGTAATCaaa        >  1:6775802/1‑35 (MQ=255)
                            ccccccCGGCCAGCAACGGCACCACGGTAATCaaa        >  1:18380023‑M1/7‑35 (MQ=255)
                            ccccccCGGCCAGCAACGGCACCACGGTAATCaaa        >  1:2777538‑M1/7‑35 (MQ=255)
                             tACCACGGCCAGCAACGGCACCACGGTAATCAAAt       >  1:5893187/1‑35 (MQ=255)
                             tACCACGGCCAGCAACGGCACCACGGTAATCAAAt       >  1:11545320/1‑35 (MQ=255)
                             cccccCGGCCAGCAACGGCACCACGGTAATCAAAt       >  1:12745906‑M1/6‑35 (MQ=255)
                             cccccCGGCCAGCAACGGCACCACGGTAATCAAAt       >  1:4932315‑M1/6‑35 (MQ=255)
                              ccccCGGCCAGCAACGGCACGACGGTAATCAAATc      >  1:3450289‑M1/5‑35 (MQ=255)
                              ccccCGGCCAGCAACGGCACCACGGTAATCAAATc      >  1:15772664‑M1/5‑35 (MQ=255)
                              ccccCGGCCAGCAACGGCACCACGGTAATCAAATc      >  1:20580219‑M1/5‑35 (MQ=255)
                              aCCACGGCCAGCAACGGCACCACGGTAATCAAATc      >  1:4496264/1‑35 (MQ=255)
                               cccCGGCCAGCAACGGCACCACGGTAATCAAATCt     >  1:16904344‑M1/4‑35 (MQ=255)
                               ccACGGCCAGCAACGGCACCACGGTAATCAAATCt     >  1:2405064/1‑35 (MQ=255)
                                ccCGGCCAGCAACGGCACCACGGTAATCAAATCtt    >  1:17528159‑M1/3‑35 (MQ=255)
                                ccCGGCCAGCAACGGCACCACGGTAATAAAATCtt    >  1:14217126‑M1/3‑35 (MQ=255)
                                cACGGCCAGCAACGGCACCACTGTAATCAAATCtt    >  1:6057444/1‑35 (MQ=255)
                                cACGGCCAGCAACGGCACCACGGTAATCAAATCtt    >  1:13730408/1‑35 (MQ=255)
                                  CGGCCAGCAACGGCACCACGGTAATCAAATCTTTa  <  1:5960085‑M1/35‑1 (MQ=255)
                                  CGGCCAGCAACGGCACCACGGTAATCAAATCTTTa  >  1:11555470‑M1/1‑35 (MQ=255)
                                  CGGCCAGCAACGGCACCACGGTAATCAAATCTTTa  >  1:18792216‑M1/1‑35 (MQ=255)
                                  |                                  
CGTTGTGCTGTAAGCCCCCACAACCAAAGTACCACGGCCAGCAACGGCACCACGGTAATCAAATCTTTA  >  REL606/875780‑875848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.