New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 326209 = | 90 (0.880) | 5 (0.050) | 3/46 | NT | 7.2% | coding (854/1887 nt) | prpE | predicted propionyl‑CoA synthetase with ATPase domain |
? | REL606 | 3368427 = | 42 (0.430) | coding (508/990 nt) | rpoA | DNA‑directed RNA polymerase subunit alpha |
CCCCACCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/326219‑326209 ‑‑‑‑‑‑‑‑‑‑cGGCCGATTGGGCGCTCATCTTCTTCCGAATGAAT > REL606/3368427‑3368460 gCCCCCCACCCGGCCGATTGGGCGCTCATCTTCTT < 1:330604/34‑1 gCCCAGCACCCGGCCGATTGGGCGCTCATCTTCTT < 1:20434107/34‑1 CCCCACCACCCGGCCGATTGGGCGCTCATCTTCTT < 1:5816918/35‑1 CCCACCACCCGGCCGATTGGGCGCTCATCTTCTTC < 1:8429175/35‑1 cCCACCCGGCCGATTGGGCGCTCATCTTCTTCCGA < 1:15902812/34‑1 ACCACCCGGCCGATTGGGCGCTCATCTTCTTCCGA < 1:18063869/35‑1 CACCCGGCCGATTGGGCGCTCATCTTCTTCCGAAT < 1:12059086/35‑1 ACCCGGCCGATTGGGCGCTCATCTTCTTCCGAATG < 1:1381351/35‑1 CCCGGCCGATTGGGCGCTCATCTTCTTCCGAATGA < 1:18780528/35‑1 CGGCCGATTGGGCGCTCATCTTCTTCCGAATGAAT < 1:16775112/35‑1 CGGCCGATTGGGCGCTCATCTTCTTCCGAATGAAT < 1:19133240/35‑1 CCCCACCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/326219‑326209 ‑‑‑‑‑‑‑‑‑‑cGGCCGATTGGGCGCTCATCTTCTTCCGAATGAAT > REL606/3368427‑3368460 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |