New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 219525778 (0.760)26 (0.260) 7/46 NT 26.7% coding (110/837 nt) yeiG predicted esterase
?REL606 2252861 = 71 (0.690)coding (142/264 nt) napD assembly protein for periplasmic nitrate reductase

Only 100 of 158 total aligned reads displayed.

GTTTGGATCAGCGTTTCGCTGTCTTCTGCTTCCACCACCACAATCAACTGACCGCTCGGCGCGTCGCTG  >  REL606/2252827‑2252895
                                  |                                  
gTTTGGATCAGCGTTTCGCTGTCTTCTGCTTccac                                    <  1:459719/35‑1 (MQ=255)
gTTTGGATCAGCGTTTCGCTGTCTTCTGCTTccac                                    >  1:18229069/1‑35 (MQ=255)
gTTTGGATCAGCGTTTCGCTGTCTTCTGCTTccac                                    <  1:5475282/35‑1 (MQ=255)
gTTTGGATCAGCGTTTCGCTGTCTTCTGCTTccac                                    >  1:19509529/1‑35 (MQ=255)
gTTTGGATCAGCGTTTCGCTGTCTTCTGCTTccac                                    <  1:6137124/35‑1 (MQ=255)
gTTTGGATCAGCGTTTCGCTGTCTTCTGCTTccac                                    >  1:3325955/1‑35 (MQ=255)
 tttGGATCAGCGTTTCGCTGTCTTCTGCTTccacc                                   >  1:18442584/1‑35 (MQ=255)
 tttGGATCAGCGTTTCGCTGTCTTCTGCTTccacc                                   >  1:19881663/1‑35 (MQ=255)
 tttGGATCAGCGTTTCGCTGTCTTCTGCTTccacc                                   >  1:2870635/1‑35 (MQ=255)
  ttGGATCAGCGTTTCGCTGTCTTCTGCTTccacca                                  <  1:15611388/35‑1 (MQ=255)
  ttGGATCAGCGTTTCGCTGTCTTCTGCTTccacca                                  >  1:2336726/1‑35 (MQ=255)
  ttGGATCAGCGTTTCGCTGTCTTCTGCTTccacca                                  >  1:11579886/1‑35 (MQ=255)
   tGGATCAGCGTTTCTCTGTCTTCTGCTTccaccac                                 >  1:3472791/1‑35 (MQ=255)
   tGGATCAGCGTTTCGCTGTCTTCTGCTTccaccac                                 <  1:16691200/35‑1 (MQ=255)
   tGGATCAGCGTTTCGCTGTCTTCTGCTTccaccac                                 <  1:18644916/35‑1 (MQ=255)
   tGGATCAGCGTTTCGCTGTCTTCTGCTTccaccac                                 <  1:13469835/35‑1 (MQ=255)
    ggATCAGCGTTTCGCTGTCTTCTGCTTccaccacc                                >  1:10392497/1‑35 (MQ=255)
    ggATCAGCGTTTCGCTGTCTTCTGCTTccaccacc                                >  1:19732985/1‑35 (MQ=255)
     gATCAGCGTTTCGCTGTCTTCTGCTTccaccacca                               >  1:4035912/1‑35 (MQ=255)
     gATCAGCGTTTCGCTGTCTTCTGCTTccaccacca                               >  1:18828531/1‑35 (MQ=255)
     gATCAGCGTTTCGCTGTCTTCTGCTTccaccacca                               >  1:2074117/1‑35 (MQ=255)
     gATCAGCGTTTCGCTGTCTTCTGCTTccaccacca                               >  1:3209258/1‑35 (MQ=255)
      aTCAGCGTTTCGCTGTCTTCTGCTTCcaccaccac                              >  1:14848861/1‑35 (MQ=255)
      aTCAGCGTTTCGCTGTCTTCTGCTTCcaccaccac                              >  1:4151342/1‑35 (MQ=255)
       tCAGCGTTTCGCTGTCTTCTGCTTCCACCACcaca                             >  1:6239459/1‑35 (MQ=255)
        cAGCGTTTCGCTGTCTTCTTCTTCCACCACCACaa                            >  1:1125518/1‑35 (MQ=255)
        cAGCGTTTCGCTGTCTTCTGCTTCCACCACCACaa                            >  1:14121103/1‑35 (MQ=255)
        cAGCGTTTCGCTGTCTTCTGCTTCCACCACCACaa                            >  1:841403/1‑35 (MQ=255)
         aGCGTTTCGCTGTCTTCTGCTTCCACCACCACAAt                           >  1:3939483/1‑35 (MQ=255)
         aGCGTTTCGCTGTCTTCTGCTTCCACCACCACAAt                           >  1:643475/1‑35 (MQ=255)
          gCGTTTCGCTGTCTTCTGCTTCCACCACCACAATc                          >  1:18242688/1‑35 (MQ=255)
          gCGTTTCGCTGTCTTCTGCTTCCACCACCACAATc                          >  1:11983331/1‑35 (MQ=255)
           cGTTTCGCTGTCTTCTGCTTCCACCACCACAATCa                         >  1:8011547/1‑35 (MQ=255)
           cGTTTCGCTGTCTTCTGCTTCCACCACCACAATCa                         >  1:20050988/1‑35 (MQ=255)
           cGTTTCGCTGTCTTCTGCTTCCACCACCACAATCa                         >  1:17558546/1‑35 (MQ=255)
           cGTTTCGCTGTCTTCTGCTTCCACCACCACAATCa                         >  1:16475610/1‑35 (MQ=255)
           cGTTTCGCTGTCTTCTGCTTCCACCACCACAATCa                         >  1:3898503/1‑35 (MQ=255)
            gTTTCGCTGTCTTCTGCTTCCACCACCACAATCaa                        >  1:20478719/1‑35 (MQ=255)
            gTTTCGCTGTCTTCTGCTTCCACCACCACAATCaa                        >  1:3550525/1‑35 (MQ=255)
            gTTTCGCTGTCTTCTGCTTCCACCACCACAATCaa                        >  1:7048271/1‑35 (MQ=255)
            gTTTCGCTGTCTTCTGCTTCCACCACCACAATCaa                        >  1:17111811/1‑35 (MQ=255)
            gTTTCGCTGTCTTCTGCTTCCACCACCACAATCaa                        >  1:10887500/1‑35 (MQ=255)
             tttCGCTGTCTTCTGCTTCCACCACCACAATCAAc                       >  1:14701335/1‑35 (MQ=255)
             tttCGCTGTCTTCTGCTTCCACCACCACAATCAAc                       >  1:16348630/1‑35 (MQ=255)
             tttCGCTGTCTTCTGCTTCCACCACCACAATCAAc                       >  1:5183081/1‑35 (MQ=255)
              ttCGCTGTCTTCTGCTTCCACCACCACAATCAACt                      >  1:19373171/1‑35 (MQ=255)
                cGCTGTCTTCTGCTTCCACCACCACAATCAACTGa                    >  1:2307133/1‑35 (MQ=255)
                cGCTGTCTTCTGCTTCCACCACCACAATCAACTGa                    >  1:20459873/1‑35 (MQ=255)
                cGCTGTCTTCTGCTTCCACCACCACAATCAACTGa                    >  1:20234116/1‑35 (MQ=255)
                cGCTGTCTTCTGCTTCCACCACCACAATCAACTGa                    >  1:6752728/1‑35 (MQ=255)
                cGCTGTCTTCTGCTTCCACCACCACAATCAACTGa                    >  1:756181/1‑35 (MQ=255)
                  ctctctccccccccccCCACCACAATCAACTGAcc                  <  1:14276249‑M2/19‑1 (MQ=255)
                  cTGTCTTCTGCTTCCACCACCACAATCAACTGAcc                  >  1:7396655/1‑35 (MQ=255)
                   tttctccccccccccCCACCACAATCAACTGACCg                 <  1:1985292‑M2/20‑1 (MQ=255)
                   tctctccccccccccCCACCACAATCAACTGACCg                 <  1:6267970‑M2/20‑1 (MQ=255)
                   tGTCTTCTGCTTCCACCACCACAATCAACTGACCg                 >  1:1973405/1‑35 (MQ=255)
                   tGTCTTCTGCTTCCACCACCACAATCAACTGACCg                 >  1:19126917/1‑35 (MQ=255)
                   tGTCTTCTGCTTCCACCACCACAATCAACTGACCg                 >  1:9655338/1‑35 (MQ=255)
                    tcctccccccccccCCACCACAATCAACTGACCGc                <  1:12151603‑M2/21‑1 (MQ=255)
                    gTCTTCTGCTTCCACCACCACAATCAACTGACCGc                >  1:5756254/1‑35 (MQ=255)
                    gTCTTCTGCTTCCACCACCACAATCAACTGACCGc                >  1:6780733/1‑35 (MQ=255)
                     tcttctGCTTCCACCACCACAATCAACTGACCGCt               >  1:9250302/1‑35 (MQ=255)
                     tcttctGCTTCCACCACCACAATCAACTGACCGCt               >  1:3438380/1‑35 (MQ=255)
                      ccccccccccccCCACCACAATCAACTGACCGCTc              <  1:12396703‑M2/23‑1 (MQ=255)
                      ccccccccccccCCACCACAATCAACTGACCGCTc              <  1:12831873‑M2/23‑1 (MQ=255)
                        tctGCTTCCACCACCACAATCAACTGACCGCTctg            >  1:14925462/1‑33 (MQ=255)
                        ccccccccccCCACCACAATCAACTGACCGCTCgg            <  1:10606684‑M2/25‑1 (MQ=255)
                        ccccccccccCCACCACAATCAACTGACCGCTCgg            <  1:11701133‑M2/25‑1 (MQ=255)
                         ctGCTTCCACCACCACAATCAACTGACCGCTCGgc           >  1:8262192/1‑35 (MQ=255)
                         ctGCTTCCACCACCACAATCAACTGACCGCTCGgc           >  1:20191694/1‑35 (MQ=255)
                         cccccccccCCACCACAATCAACTGACCGCTCGgc           <  1:8248413‑M2/26‑1 (MQ=255)
                         cccccccccCCACCACAATCAACTGACCGCTCGgc           <  1:9862403‑M2/26‑1 (MQ=255)
                         cccccccccCCACCACAATCAACTGACCGCTCGgc           <  1:9962475‑M2/26‑1 (MQ=255)
                         cccccccccCCACCACAATCAACTGACCGCTCGgc           <  1:2595159‑M2/26‑1 (MQ=255)
                         cccccccccCCACCACAATCAACTGACCGCTCGgc           <  1:19050041‑M2/26‑1 (MQ=255)
                          ccccccccCCACCACAATCAACTGACCGCTCGgcg          <  1:16557702‑M2/27‑1 (MQ=255)
                          ccccccccCCACCACAATCAACTGACCGCTCGgcg          <  1:13070144‑M2/27‑1 (MQ=255)
                          ccccccccCCACCACAATCAACTGACCGCTCGgcg          <  1:13177549‑M2/27‑1 (MQ=255)
                          ccccccccCCACCACAATCAACTGACCGCTCAgcg          <  1:4102515‑M2/27‑1 (MQ=255)
                           gccccccCCACCACAATCAACTGACCGCTCGgcgc         <  1:5362724‑M2/28‑1 (MQ=255)
                           gCTTCCACCACCACAATCAACTGACCGCTCGgcgc         >  1:19147281/1‑35 (MQ=255)
                           gCTCCCACCACCACAATCAACTGACCGCTCGgcgc         >  1:12833386/1‑35 (MQ=255)
                            gcccccCCACCACAATCAACTGACCGCTCGGcgcg        <  1:3415487‑M2/29‑1 (MQ=255)
                             ttCCACCACCACAATCAACTGACCGCTCGGCGCGt       >  1:3613654/1‑35 (MQ=255)
                              tCCACCACCACAATCAACTGACCGCTCGGCGCGTc      >  1:8349304/1‑35 (MQ=255)
                              tCCACCACCACAATCAACTGACCGCTCGGCGCGTc      >  1:13610415/1‑35 (MQ=255)
                              ccccCCACCACAATCAACTGACCGCTCGGCGCGTc      <  1:10066521‑M2/31‑1 (MQ=255)
                               ccaccaccaCAATCAACTGACCGCTCGGCGCGTCg     >  1:12210373/1‑35 (MQ=255)
                                ccCCACCACAATCAACTGACCGCTCGGCGAGTCGc    <  1:1550896‑M2/33‑1 (MQ=255)
                                 cCCACCACAATCAACTGACCGCTCGGCGCGTCGCt   <  1:7002787‑M2/34‑1 (MQ=255)
                                 cCCACCACAATCAACTGACCGCTCGGCGCGTCGCt   <  1:9082136‑M2/34‑1 (MQ=255)
                                 cCCACCACAATCAACTGACCGCTCGGCGCGTCGCt   <  1:11559054‑M2/34‑1 (MQ=255)
                                 cCCACCACAATCAACTGACCGCTCGGCGCGTCGCt   <  1:10133485‑M2/34‑1 (MQ=255)
                                 accaccacAATCAACTGACCGCTCGGCGCGTCGCt   >  1:16541010/1‑35 (MQ=255)
                                 accaccacAATCAACTGACCGCTCGGCGCGTCGCt   >  1:5424427/1‑35 (MQ=255)
                                  ccaccacAATCAACTGACCGCTCGGCGCGTCGCTg  >  1:13207512/1‑35 (MQ=255)
                                  ccaccacAATCAACTGACCGCTCGGCGCGTCGCTg  >  1:8330313/1‑35 (MQ=255)
                                  ccaccacAATCAACTGACCGCTCGGCGCGTCGCTg  >  1:5897059/1‑35 (MQ=255)
                                  ccaccacAATCAACTGACCGCTCGGCGCGTCGCTg  >  1:10950638/1‑35 (MQ=255)
                                  ccaccacAATCAACTGACCGCTCGGCGCGTCGCTg  >  1:4223526/1‑35 (MQ=255)
                                  |                                  
GTTTGGATCAGCGTTTCGCTGTCTTCTGCTTCCACCACCACAATCAACTGACCGCTCGGCGCGTCGCTG  >  REL606/2252827‑2252895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.