New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2933125 = | 46 (0.450) | 11 (0.140) | 5/38 | NT | 16.9% | coding (1669/2874 nt) | gcvP | glycine dehydrogenase |
? | REL606 | = 3606341 | 72 (0.890) | coding (1517/2076 nt) | yhjG | predicted outer membrane biogenesis protein |
Only 100 of 178 total aligned reads displayed.
GCTACCGCGTAGTTCCGCGTCACCGTTCATTTCCCCCAGCGTCTTCTGCATCAGTTCCACATCGGGCAT > REL606/3606307‑3606375 | gctaccgcGTAGTTCCGCGTCACCGTTCATTTccc > 1:9853553/1‑35 (MQ=255) gctaccgcGTAGTTCCGCGTCACCGTTCATTTccc < 1:13245364/35‑1 (MQ=255) gctaccgcGTAGTTCCGCGTCACCGTTCATTTccc < 1:15005006/35‑1 (MQ=255) gctaccgcGTAGTTCCGCGTCACCGTTCATTTccc > 1:19491057/1‑35 (MQ=255) gctaccgcGTAGTTCCGCGTCACCGTTCATTTccc > 1:19799729/1‑35 (MQ=255) cTACCGCGTAGTTCCGCGTCACCGTTCATTTCCCc < 1:14784399‑M2/35‑2 (MQ=255) cTACCGCGTAGTTCCGCGTCACCGTTCATTTCCCc < 1:16581438‑M2/35‑2 (MQ=255) cTACCGCGTAGTTCCGCGTCACCGTTCATTTCCCc > 1:3758699‑M2/1‑34 (MQ=255) tACCGCGTAGTTCCGCGTCACCGTTCATTTCCCcc > 1:9733214‑M2/1‑33 (MQ=255) tACCGCGTAGTTCCGCGTCACCGTTCATTTCCCcc > 1:10361801‑M2/1‑33 (MQ=255) tACCGCGTAGTTCCGCGTCACCGTTCATTTCCCcc < 1:2983306‑M2/35‑3 (MQ=255) aCCGCGTAGTTCCGCGTCACCGTTCATTTCCCcca > 1:1636007‑M2/1‑32 (MQ=255) aCCGCGTAGTTCCGCGTCACCGTTCATTTCCCcca > 1:4308732‑M2/1‑32 (MQ=255) ccGCGTAGTTCCGCGTCACCGTTCATTTCCCccag > 1:18218285‑M2/1‑31 (MQ=255) ccGCGTAGTTCCGCGTCACCGTTCATTTCCCccag > 1:11245360‑M2/1‑31 (MQ=255) ccGCGTAGTTCCGCGTCACCGTTCATTTCCCccag > 1:5011570‑M2/1‑31 (MQ=255) ccGCGTAGTTCCGCGTCACCGTTCATTTCCCcaag > 1:5482577‑M2/1‑31 (MQ=255) gcgTAGTTCCTCGTCACCGTTCATTTCCCCCAGCg > 1:4500684/1‑35 (MQ=255) gcgTAGTTCCGCGTCACCGTTCATTTCCCCCAGCg > 1:2092143/1‑35 (MQ=255) gcgTAGTTCCGCGTCACCGTTCATTTCCCCCAGCg > 1:8034330/1‑35 (MQ=255) gcgTAGTTCCGCGTCACCGTTCATTTCCCCCAGCg < 1:14674481/35‑1 (MQ=255) cgTAGTTCCGCGTCACCGTTCATTTCCCCCAGCGt < 1:16028138/35‑1 (MQ=255) gTAGTTCCGCGTCACCGTTCATTTCCCCCAGCGtc > 1:7586333/1‑35 (MQ=255) gTAGTTCCGCGTCACCGTTCATTTCACCCAGCGtc < 1:10024284/35‑1 (MQ=255) gTAGTTCAGCGTCACCGTTCATTTCCCCCAGCGtc < 1:3691189/35‑1 (MQ=255) tAGTTCCGCGTCACCGTTCATTTCCCCCAGCGtct < 1:17136031/35‑1 (MQ=255) tAGTTCCGCGTCACCGTTCATTTCCCCCAGCGtct < 1:1687003/35‑1 (MQ=255) tAGTTCCGCGTCACCGTTCATTTCCCCCAGCGtct > 1:16469007/1‑35 (MQ=255) aGTTCCGCGTCACCGTTCATTTCCCCCAGCGtctt > 1:3361958/1‑35 (MQ=255) aGTTCCGCGTCACCGTTCATTTCCCCCAGCGtctt < 1:2901553/35‑1 (MQ=255) gTTCCGCGTCACCGTTCATTTCCCCCCGCGtcctc > 1:12928494/1‑35 (MQ=38) ttCCGCGTCACCGTTCATTTCCCCCAGCGtcttct < 1:10179684/35‑1 (MQ=255) ttCCGCGTCACCGTTCATTTCCCCCAGCGtcttct < 1:2742192/35‑1 (MQ=255) ttCCGCGTCACCGTTCATTTCCCCCAGCGtcttct < 1:13466672/35‑1 (MQ=255) tCCGCGTCACCGTTCATTTCCCCCAGCGTCTTCTg > 1:10715934/1‑35 (MQ=255) ccGCGTCACCGTTCATTTCCCCCAGCGTCTTCTGc > 1:1090540/1‑35 (MQ=255) ccGCGTCACCGTTCATTTCCCCCAGCGTCTTCTGc < 1:20504633/35‑1 (MQ=255) cgcgTCACCGTTCATTTCCCCCAGCGTCTTCTGCa > 1:2936417/1‑35 (MQ=255) cgcgTCACCGTTCATTTCCCCCAGCGTCTTCTGCa < 1:2720286/35‑1 (MQ=255) cgcgTCACCGTTCATTTCCCCCAGCGTCTTCTGCa < 1:9557096/35‑1 (MQ=255) cgcgTCACCGTTCATTTCCCCCAGCGTCTTCTGCa < 1:15274280/35‑1 (MQ=255) cgcgTCACCGTTCATTTCCCCCAGCGTCTTCTGCa > 1:9530048/1‑35 (MQ=255) gcgTCACCGTTCATTTCCCCCAGCGTCTTCTGCAt < 1:17142938/35‑1 (MQ=255) gcgTCACCGTTCATTTCCCCCAGCGTCTTCTGCAt < 1:11096432/35‑1 (MQ=255) cgTCCCCGTTCATTTCCCCCAGCGTCTTCTGCATc < 1:221168/35‑1 (MQ=255) cgTCACCGTTCATTTCCCCCAGCGTCTTCTGCATc < 1:5664075/35‑1 (MQ=255) cgTCACCGTTCATTTCCCCCAGCGTCTTCTGCATc > 1:18469178/1‑35 (MQ=255) cgTCACCGTTCATTTCCCCCAGCGTCTTCTGCATc > 1:16430885/1‑35 (MQ=255) gTCACCGTTCATTTCCCCCAGCGTCTTCTGCATCa < 1:9385824/35‑1 (MQ=255) gTCACCGTTCATTTCCCCCAGCGTCTTCTGCATCa < 1:6842961/35‑1 (MQ=255) gTCACCGTTCATTTCCCCCAGCGTCTTCTGCATCa < 1:19102725/35‑1 (MQ=255) gTCACCGTTCATTTCCCCCAGCGTCTTCTGCATCa < 1:8233419/35‑1 (MQ=255) tCACCGTTCATTTCCCCCAGCGTCTTCTGCATCAg > 1:1550546/1‑35 (MQ=255) tCACCGTTCATTTCCCCCAGCGTCTTCTGCATCAg < 1:5424219/35‑1 (MQ=255) cACCGTTCATTTCCCCCAGCGTCTTCTGCATCAGt < 1:7746898/35‑1 (MQ=255) aCCGTTCATTTCCCCCAGCGTCTTCTGCATCAGtt < 1:14142438/35‑1 (MQ=255) aCCGTTCATTTCCCCCAGCGTCTTCTGCATCAGtn < 1:8999417/35‑1 (MQ=255) nngNTNNTTTCCCCCAGCGTCTTCTGCATCAGTTc < 1:6389580/33‑1 (MQ=37) ccGTTCATTTCCCCCAGCGTCTTCTGCATCAGTTc > 1:7440162/1‑35 (MQ=255) cGTTCATTTCCTCCAGCGTCTTCTGCATCAGTCcc > 1:10283335/1‑35 (MQ=37) cGTTCATTTCCCCCAGCGTCTTCTGCATCAGTTcc < 1:3955006/35‑1 (MQ=255) gTTCATTTCCCCCAGCGTCTTCTGCATCAGTTCca < 1:20190379/35‑1 (MQ=255) gTTCATTTCCCCCAGCGTCTTCTGCATCAGTTCca < 1:4797276/35‑1 (MQ=255) gTTCATTCCCCccagccagtcagccagctgcgcaa > 1:10062150‑M2/1‑11 (MQ=255) ttCATTTCCCccagccagtcagccagctgcgcaat > 1:6810551‑M2/1‑10 (MQ=255) ttCATTTCCCCCAGCGTCTTCTGCATCAGTTCcac > 1:5602561/1‑35 (MQ=255) ttCATTTCCCCCAGCGTCTTCTGCATCAGTTCcac < 1:9058857/35‑1 (MQ=255) ttCATTTCCCCCAGCGTCTTCTGCATCAGTTCcac > 1:17284244/1‑35 (MQ=255) ttCATTTCCCCCAGCGTCTTCTGCATCAGTTCcac < 1:16250346/35‑1 (MQ=255) tCATTTCCCCCAGCGTCTTCTGCATCAGTTCcaca < 1:16122730/35‑1 (MQ=255) tCATTCCCCccagccagtcagccagctgcgcaatc > 1:148617‑M2/1‑9 (MQ=255) ccaTTTCCCccagccagtcagccagctgcgcaatc > 1:13295448‑M2/2‑9 (MQ=255) cATTTCCCCCATCGTCTTCTGCATCAGTTCCACAt > 1:18801512/1‑35 (MQ=255) cATTTCCCCCAGCGTCTTCTGCATCAGTTCCACAt < 1:13127860/35‑1 (MQ=255) cATTTCCCCCAGCGTCTTCTGCATCAGTTCCACAt > 1:12142797/1‑35 (MQ=255) cATTTCCCCCAGCGTCTTCTGCATCAGTTCCACAt > 1:19134750/1‑35 (MQ=255) atgtCCCCCAGCGTCTTCTGCATCAGTTCCACATc < 1:6437806/32‑1 (MQ=255) agttccCccagccagtcagccagctgcgcaatcat > 1:11580060‑M2/3‑7 (MQ=255) aTTTCCCCCAGCGTCTTCTGCATCAGTTCCACATc > 1:5867194/1‑35 (MQ=255) aTTTCCCCCAGCGTCTTCTGCATCAGTTCCACATc > 1:11319771/1‑35 (MQ=255) tttCCCCCAGCGTCTTCTGCATCAGTTCCACATCg > 1:19452256/1‑35 (MQ=255) tttCCCCCAGCGTCTTCTGCATCAGTTCCACATCg < 1:10658270/35‑1 (MQ=255) tttCCCCCAGCGTCTTCTGCATCAGTTCCACATCg < 1:10324312/35‑1 (MQ=255) ttcCCCccagccagtcagccagctgcgcaatcatc > 1:11149468‑M2/1‑6 (MQ=255) ttCCCccagccagtcagccagctgcgcaatcatct > 1:15717118‑M2/1‑5 (MQ=255) ttCCCCCAGCGTCTTCTGCATCAGTTCCACATCgg < 1:18983333/35‑1 (MQ=255) tgcccccAGCGTCTTCTGCATCAGTTCCACATCgg < 1:4163687/33‑1 (MQ=255) tccccccagccagtcagccagctgcgcaatcatct > 1:14195366‑M2/3‑5 (MQ=255) tCCCCCAGCGTCTTCTGCATCAGTTCAACATCggg < 1:9593703/35‑1 (MQ=255) ccccccagccagtcagccagctgcgcaatcatctg > 1:18564719‑M2/2‑4 (MQ=255) ccccccagccagtcagccagctgcgcaatcatctg > 1:6543773‑M2/2‑4 (MQ=255) cccccAGCGTCTTCTGCATCAGTTCCACATCGGGc < 1:13448271/35‑1 (MQ=255) cccccAGCGTCTTCTGCATCAGTTCCACATCGGGc < 1:12659942/35‑1 (MQ=255) cccccAGCGTCTTCTGCATCAGTTCCACATCGGGc > 1:5975268/1‑35 (MQ=255) ccccagccagtcagccagctgcgcaatcatctgct > 1:17601446‑M2/1‑2 (MQ=255) ccccAGCGTCTTCTGCATCAGTTCCACATCGGGCa > 1:7449025/1‑35 (MQ=255) cccagccagtcagccagctgcgcaatcatctgctg > 1:1317581‑M2/1‑1 (MQ=255) cccagccagtcagccagctgcgcaatcatctgatg > 1:11894175‑M2/1‑1 (MQ=255) cccAGCGTCTTCTGCATCAGTTCCACATCGGGCAt > 1:19330324/1‑35 (MQ=255) cccAGCGTCTTCTGCATCAGTTCCACATCGGGCAt > 1:18147898/1‑35 (MQ=255) | GCTACCGCGTAGTTCCGCGTCACCGTTCATTTCCCCCAGCGTCTTCTGCATCAGTTCCACATCGGGCAT > REL606/3606307‑3606375 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |