Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | REL606 | 648,692 | C→T | 100% | R69H (CGC→CAC) | mrdB ← | cell wall shape‑determining protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 648,692 | 0 | C→T | 100.0% | 405.4 | 143 | R69H (CGC→CAC) | mrdB | cell wall shape‑determining protein |
Reads supporting (aligned to +/- strand): new base (98/45): ref base (0/0): total (98/45) |
Only 100 of 143 total aligned reads displayed.
TATAGAGATAGGGGGCCCAGCCTTCATAAACGCGTGGAGGAATTTGCGCCATCACCACCATGAT > REL606/648660‑648723 | tataGAGATAGGGGGCCCAGCCTTCATAAACGTGt < 1:17323571/35‑1 (MQ=255) tataGAGATAGGGGGCCCAGCCTTCATAAACGTGt > 1:11839953/1‑35 (MQ=255) tataGAGATAGGGGGCCCAGCCTTCATAAACGTGt < 1:11411610/35‑1 (MQ=255) tataGAGATAGGGGGCCCAGCCTTCATAAACGTGt < 1:5443889/35‑1 (MQ=255) tataGAGATAGGGGGCCCAGCCTTCATAAACGTGt > 1:387541/1‑35 (MQ=255) ataGAGATAGGGGGCCCAGCCTTCATAAACGTGTg > 1:6961702/1‑35 (MQ=255) ataGAGATAGGGGGCCCAGCCTTCATAAACGTGTg < 1:10295550/35‑1 (MQ=255) ataGAGATAGGGGGCCCAGCCTTCATAAACGTGTg > 1:4246071/1‑35 (MQ=255) ataGAGATAGGGGGCCCAGCCTTCATAAACGTGTg > 1:8523110/1‑35 (MQ=255) taGAGATAGGGGGCCCAGCCTTCATAAACGTGTgg > 1:17471525/1‑35 (MQ=255) taGAGATAGGGGGCCCAGCCTTCATAAACGTGTgg > 1:5412007/1‑35 (MQ=255) taGAGATAGGGGGCCCAGCCTTCATAAACGTGTgg > 1:10101998/1‑35 (MQ=255) gagaTAGGGGGCCCAGCCTTCATAAACGTGTggag > 1:5156557/1‑35 (MQ=255) gagaTAGGGGGCCCAGCCTTCATAAACGTGTggag > 1:10815662/1‑35 (MQ=255) gagaTAGGGGGCCCAGCCTTCATAAACGTGTggag > 1:17091373/1‑35 (MQ=255) agaTAGGGGGCCCAGCCTTCATAAACGTGTggagg < 1:9264225/35‑1 (MQ=255) agaTAGGGGGCCCAGCCTTCATAAACGTGTggagg > 1:5310412/1‑35 (MQ=255) agaTAGGGGGCCCAGCCTTCATAAACGTGTggagg > 1:14779614/1‑35 (MQ=255) gaTAGGGGGCCCAGCCTTCATAAACGTGTggagga > 1:1399648/1‑35 (MQ=255) gaTAGGGGGCCCAGCCTTCATAAACGTGTggagga > 1:4694044/1‑35 (MQ=255) gaTAGGGGGCCCAGCCTTCATAAACGTGTggagga < 1:10360297/35‑1 (MQ=255) aTAGGGGGCCCAGCCTTCATAAACGTGTGGAGGaa > 1:8474427/1‑35 (MQ=255) aTAGGGGGCCCAGCCTTCATAAACGTGTGGAGGaa < 1:685809/35‑1 (MQ=255) aTAGGGGGCCCAGCCTTCATAAACGTGTGGAGGaa > 1:10625865/1‑35 (MQ=255) aTAGGGGGCCCAGCCTTCATAAACGTGTGGAGGaa < 1:11412834/35‑1 (MQ=255) tAGGGGGCCCAGCCTTCATAAACGTGTGGAGTAAt > 1:15612182/1‑35 (MQ=38) tAGGGGGCCCAGCCTTCATAAACGTGTGGAGTAAt > 1:20614053/1‑35 (MQ=38) tAGGGGGCCCAGCCTTCATAAACGTGTGGAGGAAt > 1:14290039/1‑35 (MQ=255) tAGGGGGCCCAGCCTTCATAAACGTGTGGAGGAAt > 1:8505700/1‑35 (MQ=255) tAGGGGGCCCAGCCTTCATAAACGTGTGGAGGAAt > 1:18534264/1‑35 (MQ=255) tAGGGGGCCCAGCCTTCATAAACGTGTGGAGGAAt > 1:2820839/1‑35 (MQ=255) tAGGGGGCCCAGCCTTCATAAACGTGTGGAGGAAt < 1:2943721/35‑1 (MQ=255) tAGGGGGCCCAGACTTCATAAACGTGTGGAGGAAt < 1:7674063/35‑1 (MQ=38) aGGGGGCCCAGCCTTCATAAACGTGTGGAGGAAtt < 1:17706035/35‑1 (MQ=255) aGGGGGCCCAGCCTTCATAAACGTGTGGAGGAAtt < 1:12694529/35‑1 (MQ=255) aGGGGGCCCAGCATTCATAAACGTGTGGAGGAAtt < 1:2121905/35‑1 (MQ=38) gggggCCCAGCCTTCATAAACGTGTTGAGGAAttt > 1:1806725/1‑35 (MQ=38) gggggCCCAGCCTTCATAAACGTGTGGAGGAAttt > 1:17638853/1‑35 (MQ=255) gggggCCCAGCCTTCATAAACGTGTGGAGGAAttt > 1:20076615/1‑35 (MQ=255) gggggCCCAGCCTTCATAAACGTGTGGAGGAAttt < 1:11447387/35‑1 (MQ=255) gggggCCCAGCCTTCATAAACGTGTGGAGGAAttt < 1:6709415/35‑1 (MQ=255) gggggCCCAGCCTTCATAAACGTGTGGAGGAAttt < 1:14548818/35‑1 (MQ=255) gggggCCCAGCCTTCATAAACGTGTGGAGGAAttt > 1:11919805/1‑35 (MQ=255) ggggCCCAGCCTTCATAAACGTGTGGAGGAATTTg < 1:11648427/35‑1 (MQ=255) ggggCCCAGCCTTCATAAACGTGTGGAGGAATTTg < 1:14190023/35‑1 (MQ=255) ggggCCCAGCCTTCATAAACGTGTGGAGGAATTTg > 1:12990226/1‑35 (MQ=255) gggCCCAGCCTTCATAAACGTGTGGAGGAATTTgc > 1:563216/1‑35 (MQ=255) ggCCCAGCCTTCATAAACGTGTGGAGGAATTTgcg > 1:12501271/1‑35 (MQ=255) ggCCCAGCCTTCATAAACGTGTGGAGGAATTTgcg > 1:20525927/1‑35 (MQ=255) ggCCCAGCCTTCATAAACGTGTGGAGGAATTTgcg < 1:13360987/35‑1 (MQ=255) ggCCCAGCCTTCATAAACGTGTGGAGGAATTTgcg < 1:16636017/35‑1 (MQ=255) ggCCCAGCCTTAATAAACGTGTGGAGGAATTTgcg < 1:18043791/35‑1 (MQ=37) gCCCAGCCTTCATAAACGTGTGGAGGAATTTgcgc < 1:5074539/35‑1 (MQ=255) gCCCAGCCTTCATAAACGTGTGGAGGAATTTgcgc < 1:3414544/35‑1 (MQ=255) gCCCAGCCTTCATAAACGTGTGGAGGAATTTgcgc > 1:424359/1‑35 (MQ=255) gCCCAGCCTTCATAAACGTGTGGAGGAATTTgcgc > 1:15518405/1‑35 (MQ=255) gCCCAGCCTTCATAAACGTGTGGAGGAATTTgcgc < 1:19765092/35‑1 (MQ=255) gCCCAGCCTTCATAAACGTGTGGAGGAATTTgcgc > 1:19977080/1‑35 (MQ=255) cccAGCCTTCATAAACGTGTGGAGGAATTTGCGcc > 1:12321731/1‑35 (MQ=255) cccAGCCTTCATAAACGTGTGGAGGAATTTGCGcc > 1:9410378/1‑35 (MQ=255) ccAGCCTTCATAAACGTGTGGAGGAATTTGCGCCa > 1:18515053/1‑35 (MQ=255) ccAGCCTTCATAAACGTGTGGAGGAATTTGCGCCa < 1:14056255/35‑1 (MQ=255) ccAGCCTTCATAAACGTGTGGAGGAATTTGCGCCa < 1:2979121/35‑1 (MQ=255) cAGCCTTCATAAACGTGTGGAGGAATTTGCGCCAt < 1:4110071/35‑1 (MQ=255) cAGCCTTCATAAACGTGTGGAGGAATTTGCGCCAt < 1:5269807/35‑1 (MQ=255) cAGCCTTCATAAACGTGTGGAGGAATTTGCGCCAt < 1:7053715/35‑1 (MQ=255) cAGCCTTCATAAACGTGTGGAGGAATTTGCGCCAt > 1:10075517/1‑35 (MQ=255) cAGCCTTCATAAACGTGTGGAGGAATTTGCGCCAt > 1:18812846/1‑35 (MQ=255) aGCCTTCATAAACGTGTGGAGGAATTTGCGCCATc > 1:7811866/1‑35 (MQ=255) aGCCTTCATAAACGTGTGGAGGAATTTGCGCCATc < 1:14586106/35‑1 (MQ=255) aGCCTTCATAAACGTGTGGAGGAATTTGCGCCATc > 1:9331181/1‑35 (MQ=255) aGCCTTCATAAACGTGTGGAGGAATTTGCGCCATc < 1:4790383/35‑1 (MQ=255) aGCCTTCATAAACGTGTGGAGGAATTTGCGCCATc > 1:17273113/1‑35 (MQ=255) gCCTTCATAAACGTGTGGAGGAATTTGCGCCATca > 1:10838556/1‑35 (MQ=255) gCCTTCATAAACGTGTGGAGGAATTTGCGCCATca > 1:15181818/1‑35 (MQ=255) ccTTCATAAACGTGTGGAGTAATTTGCGCCATcac > 1:6970546/1‑35 (MQ=37) ccTTCATAAACGTGTGGAGGAATTTGCGCCATcac < 1:19100836/35‑1 (MQ=255) ccTTCATAAACGTGTGGAGGAATTTGCGCCATcac > 1:9038737/1‑35 (MQ=255) ccTTCATAAACGTGTGGAGGAATTTGCGCCATcac > 1:11761606/1‑35 (MQ=255) ccTTCATAAACGTGTGGAGGAATTTGCGCCATcac < 1:12615890/35‑1 (MQ=255) cTTCATAAACGTGTGGAGGAATTTGCGCCATcacc > 1:13801042/1‑35 (MQ=255) ttCATAAACGTGTGGAGGAATTTGCGCCATcacca < 1:20565624/35‑1 (MQ=255) tCATAAACGTGTGGAGGAATTTGCGCCATcaccac > 1:17792669/1‑35 (MQ=255) tCATAAACGTGTGGAGGAATTTGCGCCATcaccac > 1:13787576/1‑35 (MQ=255) cATAAACGTGTGGAGGAATTTGCGCCATCaccacc > 1:19684716/1‑35 (MQ=255) cATAAACGTGTGGAGGAATTTGCGCCATCaccacc > 1:3063676/1‑35 (MQ=255) aTAAACGTGTGGAGGAATTTGCGCCATCAccacca > 1:9557435/1‑35 (MQ=255) aTAAACGTGTGGAGGAATTTGCGCCATCAccacca > 1:17668839/1‑35 (MQ=255) tAAACGTGTGGAGGAATTTGCGCCATCACCACCat > 1:7009512/1‑35 (MQ=255) aaaCGTGTGGAGGAATTTGCGCCATCACCACCatg > 1:17924219/1‑35 (MQ=255) aaaCGTGTGGAGGAATTTGCGCCATCACCACCatg > 1:9041512/1‑35 (MQ=255) aaaCGTGTGGAGGAATTTGCGCCATCACCACCatg > 1:18372072/1‑35 (MQ=255) aaaCGTGTGGAGGAATTTGCGCCATCACCACCata > 1:4210560/1‑34 (MQ=255) aaCGTGTGGAGGAATTTGCGCCATCACCACCatga > 1:14397892/1‑35 (MQ=255) aaCGTGTGGAGGAATTTGCGCCATCACCACCatga > 1:13417338/1‑35 (MQ=255) aaCGTGTGGAGGAATTTGCGCCATCACCACCatga > 1:1905586/1‑35 (MQ=255) aCGTGTGGAGGAATTTGCGCCATCACCACCatgat > 1:13831423/1‑35 (MQ=255) aCGTGTGGAGGAATTTGCGCCATCACCACCatgat > 1:17123615/1‑35 (MQ=255) aCGTGTGGAGGAATTTGCGCCATCACCACCatgat > 1:17941023/1‑35 (MQ=255) aCGTGTGGAGGAATTTGCGCCATCACCACAatgat < 1:7066709/35‑1 (MQ=37) | TATAGAGATAGGGGGCCCAGCCTTCATAAACGCGTGGAGGAATTTGCGCCATCACCACCATGAT > REL606/648660‑648723 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |