New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1493185 | 140 (1.360) | 10 (0.120) | 4/38 | NT | 10.9% | intergenic (‑10/‑232) | yncD/yncE | predicted iron outer membrane transporter/hypothetical protein |
? | REL606 | 3269358 = | 53 (0.650) | coding (415/972 nt) | ispB | octaprenyl diphosphate synthase |
ACGGTCTGTCGGACGGAAAAAATCTTCATGAAAAAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1493147‑1493185 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagccGTAAACGTCATCGCAGAAGGTGAAGTTCTGCAAC > REL606/3269358‑3269391 ACGGTCTGTCGGACGGAAAAAATCTTCCTGAAAAA < 1:4125004/35‑1 ACGGTCTGTCGGACGGAAAAAATCTTCATGAAAAA < 1:597729/35‑1 ACGGTCTGTCGGACGGAAAAAATCTTCATGAAAAA < 1:16169038/35‑1 ACGGTCTGTCGGACGGAAAAAATCTTCATGAAAAA > 1:13668231/1‑35 ACGGTCTGTCGGACGGAAAAAATCTTCATGAAAAA > 1:19935879/1‑35 ACGGTCTGTCGGACGGAAAAAATCTTCATGAAAAA < 1:12790090/35‑1 CGGTCTGTCGGACGGAAAAAATCTTCATGAAAAAA > 1:1405599/1‑35 CGGTCTGTCGGACGGAAAAAATCTTCATGAAAAAA < 1:14343279/35‑1 CGGTCTGTCGGACGGAAAAAATCTTCATGAAAAAA < 1:15829070/35‑1 CGGTCTGTCGGACGGAAAAAATCTTCATGAAAAAA < 1:16597495/35‑1 CGGTCTGTCGGACGGAAAAAATCTTCATGAAAAAA < 1:20170015/35‑1 CGGTCTGTCGGACGGAAAAAATCTTCATGAAAAAA > 1:413610/1‑35 CGGTCTGTCGGACGGAAAAAATCTTCATGAAAAAA > 1:8492121/1‑35 GGTCTGTCGGACGGAAAAAATCTTCATGAAAAAAG > 1:2767609/1‑35 GGTCTGTCGGACGGAAAAAATCTTCATGAAAAAAG > 1:16883128/1‑35 GGTCTGTCGGACGGAAAAAATCTTCATGAAAAAAG > 1:3588790/1‑35 GGTCTGTCGGACGGAAAAAATCTTCATGAAAAAAG > 1:13690465/1‑35 GGTCTGTCGGACGGAAAAAATCTTCATGAAAAAAG < 1:5550929/35‑1 GGTCTGTCGGACGGAAAAAATCTTCATGAAAAAAG > 1:10124270/1‑35 GTCTGTCGGACGGAAAAAATCTTCATGAAAAAAGC < 1:17547392/35‑1 GTCTGTCGGACGGAAAAAATCTTCATGAAAAAAGC < 1:6726352/35‑1 GTCTGTCGGACGGAAAAAATCTTCATGAAAAAAGC < 1:13736840/35‑1 GTCTGTCGGACGGAAAAAATCTTCATGAAAAAAGC < 1:13029551/35‑1 TCTGTCGGACGGAAAAAATCTTCATGAAAAAAGCC < 1:12949359/35‑1 TCTGTCGGACGGAAAAAATCTTCATGAAAAAAGCC < 1:12390848/35‑1 aagTCATGAAAAAAGCCGTAAACGTCATCGCAGAA < 1:14863091/32‑1 gTCATGTAAAAAGCCGTAAACGTCATCGCAGAAGG < 1:5443679/34‑1 gTCATGAAAAAAGCCGTAAACGTCATCGCAGAAGG < 1:17179004/34‑1 gTCATAAAAAAAGCCGTAAACGTCATCGCAGAAGG < 1:19017752/34‑1 gTCAGGAAAAAAGCCGTAAACGTCATCGCAGAAGG < 1:2460917/34‑1 TCATGAAAAAAGCCGTAAACGTCATCGCAGAAGGT < 1:8599467/35‑1 TCAGGAAAAAAGCCGTAAACGTCATCGCAGAAGGT < 1:5382880/35‑1 CATGAAAAAAGCCGTAAACGTCATCGCAGAAGGTG < 1:1962606/35‑1 ATGTAAAAAGCCGTAAACGTCATCGCAGAAGGTGA < 1:16674347/35‑1 tgtAAAAAGCCGTAAACGTCATCGCAGAAGGTGAA < 1:19994859/32‑1 taAAAAAAGCCGTAAACGTCATCGCAGAAGGTGAA < 1:15614270/33‑1 TGAAAAAAGCCGTAAACGTCATCGCAGAAGGTGAA < 1:18106712/35‑1 gtAAAAAGCCGTAAACGTCATCGCAGAAGGTGAAG < 1:3627903/33‑1 aAAAAAAGCCGTAAACGTCATCGCAGAAGGTGAAG < 1:19271404/34‑1 GAAAAAAGCCGTAAACGTCATCGCAGAAGGTGAAG < 1:17310271/35‑1 tAAAAAGCCGTAAACGTCATCGCAGAAGGTGAAGT < 1:7725638/34‑1 tAAAAAGCCGTAAACGTCATCGCAGAAGGTGAAGT < 1:9915048/34‑1 gagAAAGCCGTAAACGTCATCGCAGAAGGTGAAGT < 1:1238145/32‑1 AAAAAAGCCGTAAACGTCATCGCAGAAGGTGAAGT < 1:15090032/35‑1 AAAAAGCCGTAAACGTCATCGCAGAAGGTGAAGTT < 1:3684132/35‑1 AAAAGCCGTAAACGTCATCGCAGAAGGTGAAGTTC < 1:5978853/35‑1 AAAAGCCGTAAACGTCATCGCAGAAGGTGAAGTTC < 1:12446975/35‑1 AAAAGCCGTAAACGTCATCGCAGAAGGTGAAGTTC < 1:10896016/35‑1 AAAAGCCGTAAACGTCATCGCAGAAGGTGAAGTTC < 1:18680726/35‑1 AAAGCCGTAAACGTCATCGCAGAAGGTGAGGTTCT < 1:15847646/35‑1 AAAGCCGTAAACGTCATCGCAGAAGGTGAAGTTCT < 1:5810413/35‑1 AAAGCCGTAAACGTCATCGCAGAAGGTGAAGTTCT < 1:20498800/35‑1 AAAGCCGTAAACGTCATCGCAGAAGGTGAAGTTCT < 1:17454208/35‑1 AAGCCGTAAACGTCATCGCAGAATGTGAAGTTCTG > 1:13176631/1‑35 AAGCCGTAAACGTCATCGCAGAAGGTGAAGTTCTG < 1:13695300/35‑1 AGCCGTAAACGTCATCGCAGAATGTGAAGTTCTGC > 1:3436685/1‑35 AGCCGTAAACGTCATCGCAGAAGGTGAAGTTCTGC > 1:15471850/1‑35 AGCCGTAAACGTCATCGCAGAAGGTGAAGTTCTGC > 1:4036524/1‑35 AGCCGTAAACGTCATCGCAGAAGGTGAAGTTCTGC < 1:12247447/35‑1 AGCCGTAAACGTCATCGCAGAAGGTGAAGTTCTGC > 1:4372515/1‑35 AGCCGTAAACGTCATCGCAGAAGGTGAAGTTCTGC > 1:5591226/1‑35 GCCGTAAACGTCATCGCAGAAGGTGAAGTTCTGCA < 1:10578682/35‑1 GCCGTAAACGTCATCGCAGAAGGTGAAGTTCTGCA > 1:15519470/1‑35 GCCGTAAACGTCATCGCAGAAGGTGAAGTTCTGCA < 1:11460069/35‑1 GCCGTAAACGTCATAGCAGAAGGTGAAGTTCTGCA < 1:20288843/35‑1 CCGTAAACGTCATCGCAGAAGGTGAAGTTCTGCAA < 1:6276713/35‑1 CCGTAAACGTCATCGCAGAAGGTGAAGTTCTGCAA > 1:18248977/1‑35 CCGTAAACGTCATCGCAGAAGGTGAAGTTCTGCAA > 1:1905636/1‑35 CGTAAACGTCATCGCAGAAGGTGAAGTTCTGCAAC < 1:11310561/35‑1 CGTAAACGTCATCGCAGAAGGTGAAGTTCTGCAAC < 1:1373416/35‑1 CGTAAACGTCATCGCAGAAGGTGAAGTTCTGCAAC < 1:12246623/35‑1 CGTAAACGTCATCGCAGAAGGTGAAGTTCTGCAAC > 1:13281076/1‑35 ACGGTCTGTCGGACGGAAAAAATCTTCATGAAAAAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1493147‑1493185 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagccGTAAACGTCATCGCAGAAGGTGAAGTTCTGCAAC > REL606/3269358‑3269391 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |