New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2017683 | 35 (0.340) | 14 (0.170) | 3/38 | NT | 18.8% | intergenic (‑178/+89) | yeeF/yeeY | predicted amino‑acid transporter/predicted DNA‑binding transcriptional regulator |
? | REL606 | = 2919373 | 93 (1.140) | intergenic (+6/+37) | idi/lysS | isopentenyl‑diphosphate delta‑isomerase/lysine tRNA synthetase, constitutive |
Only 100 of 132 total aligned reads displayed.
GAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGC > REL606/2017649‑2017717 | gAAGCAAAAAATAACCGACGCTGATGAAACGTCGG > 1:18311982‑M1/1‑35 (MQ=255) aaaaaaaaaacccCCGACGCTGATGAAACGTCGGt > 1:16882405‑M1/14‑35 (MQ=255) aaaaaaaaaacccCCGACGCTGATGAAACGTCGGt > 1:6223666‑M1/14‑35 (MQ=255) aaGCAAAAAATAACCGACGCTGATGAAACGTCGGg > 1:10554303‑M1/1‑34 (MQ=255) aaaaaaaaacccCCGACGCTGATGAAACGTCGGtt > 1:10243371‑M1/13‑35 (MQ=255) aGCAAAAAATAACCGACGCTGATGAAACGTCGGgg > 1:14884115‑M1/1‑33 (MQ=255) aGCAAAAAATAACCGACGCTGATGAAACGTCGGgg > 1:6752896‑M1/1‑33 (MQ=255) gCAAAAAATAACCGACGCTGATGAAACGTCGGggt > 1:3748288‑M1/1‑32 (MQ=255) gCAAAAAATAACCGACGCTGATGAAACGTCGGggt > 1:13223610‑M1/1‑32 (MQ=255) aaaaaaaacccCCGACGCTGATGAAACGTCGGttt > 1:5702640‑M1/12‑35 (MQ=255) cAAAAAATAACCGACGCTGATGAAACGTCGGggtt > 1:19347786‑M1/1‑31 (MQ=255) aaaaaaccccCCGACGCTGATGAAACGTCGGtttt > 1:10421962‑M1/11‑35 (MQ=255) aaaaaaacccCCGACGCTGATGAAACGTCGGtttt > 1:15893402‑M1/11‑35 (MQ=255) aaaaaaacccCCGACGCTGATGAAACGTCGGtttt > 1:8058193‑M1/11‑35 (MQ=255) aaaaaaTAACCGACGCTGATGAAACGTCGGggttt > 1:13783270‑M1/1‑30 (MQ=255) aaaaaaTAACCGACGCTGATGAAACGTCGGggttt > 1:15289764‑M1/1‑30 (MQ=255) aaaaccccCCGACGCTGATGAAACGTCGGTTTTTa > 1:5798182‑M1/9‑35 (MQ=255) aaaaacccCCGACGCTGATGAAACGTAGGTTTTTa > 1:5424980‑M1/9‑35 (MQ=255) aaaaacccCAGACGCTGATGAAACGTCGGTTTTTa > 1:902871‑M1/9‑35 (MQ=255) aaaccccCCGACGCTGATGAAACGTCGGTTTTTAg > 1:10934208‑M1/8‑35 (MQ=255) aaaacccCCGACGCTGATGAAACGTCGGTTTTTAg > 1:10625995‑M1/8‑35 (MQ=255) aaaaTAACCGACGCTGATGAAACGTCGGgtttttg > 1:18455566‑M1/1‑28 (MQ=255) aaaaTAACCGACGCTGATGAAACGTCGGggttttt > 1:8859657‑M1/1‑28 (MQ=255) aaaaTAACCGACGCTGATGAAACGTCGGggttttt > 1:14657661‑M1/1‑28 (MQ=255) aaccccCCGACGCTGATGAAACGTCGGTTTTTAGt > 1:20276429‑M1/7‑35 (MQ=255) aaacccCCGACGCTGATGAAACGTCGGTTTTTAGt > 1:19030614‑M1/7‑35 (MQ=255) aaaTAACCGACGCTGATGAAACGTCGGggtttttt > 1:3466032‑M1/1‑27 (MQ=255) aaaTAACCGACGCTGATGAAACGTCGGggtttttt > 1:15369435‑M1/1‑27 (MQ=255) aaaTAACCGACGCTGATGAAACGTCGGggtttttg > 1:11931193‑M1/1‑27 (MQ=255) aaaTAACCGACGCTGATGAAACGTCGGggttttgt > 1:2611915‑M1/1‑27 (MQ=255) aaTAACCGACGCTGATGAAACGTCGGggttttgtc > 1:19596341‑M1/1‑26 (MQ=255) acccCCGACGCTGATGAAACGTCGGTTTTTAGTCa > 1:1279604‑M1/5‑35 (MQ=255) aTAACCGACGCTGATGAAACGTCGGggttttttta > 1:17641764‑M1/1‑25 (MQ=255) tAACCGACGCTGATGAAACGTCGGggtttttttat > 1:3743737‑M1/1‑24 (MQ=255) ccCCGACGCTGATGAAACGTCGGTTTTTAGTCAtt > 1:17216064‑M1/3‑35 (MQ=255) aCCGACGCTGATGAAACGTCGGGGTTTTGTCAttt > 1:9872623/1‑35 (MQ=25) CGACGCTGATGAAACGTCGGTTTTTAGTCAttttt > 1:11165611‑M1/1‑35 (MQ=255) CGACGCTGATGAAACGTCGGTTTTTAGTCAttttt > 1:18318872‑M1/1‑35 (MQ=255) CGACGCTGATGAAACGTCGGTTTTTAGTAAttttt > 1:3036473‑M1/1‑35 (MQ=255) gACGCTGATGAAACGTCGGGGTTTTGTTTtttttt > 1:17469634/1‑35 (MQ=12) aCGCTGATGAAACGTCGGTTTTTAGTCATTTTTTg < 1:15995449/35‑1 (MQ=255) aCGCTGATGAAACGTCGGTTTTTAGTCATTTTTTg < 1:8343815/35‑1 (MQ=255) aCGCTGATGAAACGTCGGTTTTTAGTCATTTTTTg < 1:6447688/35‑1 (MQ=255) cGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGa < 1:10454294/35‑1 (MQ=255) cGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGa < 1:1512009/35‑1 (MQ=255) cGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGa < 1:16092692/35‑1 (MQ=255) gCTGATGAAACGTCGGTTTTTAGTCATTTTTTGAc < 1:14273447/35‑1 (MQ=255) gCTGATGAAACGTCGGTTTTTAGTCATTTTTTGAc < 1:6173716/35‑1 (MQ=255) gCTGATGAAACGTCGGTTTTTAGTCATTTTTTGAc < 1:2842051/35‑1 (MQ=255) gCTGATGAAACGTCGGTTTTTAGTCATTTTTTGAc < 1:9084289/35‑1 (MQ=255) gCTGATGAAACGTCGGGTTTTTGTTAttttttttt > 1:4974700/1‑32 (MQ=19) cTGATGAAACGTCGGTTTTTAGTCATTTTTTGACa < 1:14123993/35‑1 (MQ=255) cTGATGAAACGTCGGTTTTTAGTCATTTTTTGACa < 1:15313911/35‑1 (MQ=255) cTGATGAAACGTCGGTTTTTAGTCATTTTTTGACa < 1:17503587/35‑1 (MQ=255) tgatgaAACGTCGGTTTTTAGTCATTTTTTGACAg < 1:10026325/35‑1 (MQ=255) tgatgaAACGTCGGTTTTTAGTCATTTTTTGACAg < 1:11061956/35‑1 (MQ=255) gatgaAACGTCGGTTTTTAGTCAGTTTTTGACAgc < 1:2603704/35‑1 (MQ=255) gaAACGTCGGTTTTTAGTCATTTTTTGACAgcggc < 1:17634506/35‑1 (MQ=255) aaaCGTCGGTTTTTAGTCATTTTTTGACAgcggcg < 1:8464531/35‑1 (MQ=255) aaaCGTCGGTTTTTAGTCATTTTTTGACAgcggcg < 1:11491379/35‑1 (MQ=255) cGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCAt < 1:12416193/35‑1 (MQ=255) cGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCAt < 1:5589237/35‑1 (MQ=255) gtaggTTTTTAGTCATTTTTTGACAGCGGCGCAtt < 1:19567666/32‑1 (MQ=255) ggcggggttttttaattgtgctgcgcgaaagcaga < 1:2271413‑M1/33‑31 (MQ=255) gTCGGggttttttaattgtgctgcgcgaaagcaga > 1:16438548‑M1/1‑5 (MQ=255) gTCGGggttttttaattgtgctgcgcgaaagcaga < 1:445198‑M1/35‑31 (MQ=255) gTCGGggttttttaattgtgctgcgcgaaagcaga < 1:3834622‑M1/35‑31 (MQ=255) gTCGGggttttttaattgtgctgcgcgaaagcaga < 1:18967905‑M1/35‑31 (MQ=255) gTCGGggttttttaattgtgctgcgcgaaagcaga < 1:278075‑M1/35‑31 (MQ=255) gTCGGTTTTTAGTCATTTTTTGACAGCGGCGCAtt < 1:20376526/35‑1 (MQ=255) gTCGGTTTTTAGTCATTTTTTGACAGCGGCGCAtt < 1:7213018/35‑1 (MQ=255) gTCGGTTTTTAGTCATTTTTTGACAGCGGCGCAtt < 1:12177496/35‑1 (MQ=255) gTCGGTTTTTAGTCATTTTTTGACAGCGGCGCAtt < 1:6475675/35‑1 (MQ=255) tCGGggttttttaattgtgctgcgcgaaagcagac < 1:9505922‑M1/35‑32 (MQ=255) tCGGggttttttaattgtgctgcgcgaaagcagac > 1:18722753‑M1/1‑4 (MQ=255) tCGGggttttttaattgtgctgcgcgaaagcagac < 1:18538335‑M1/35‑32 (MQ=255) tCGGTTTTTAGTCATTTTTTGACAGCGGCGCATtg < 1:17986801/35‑1 (MQ=255) tCGGTTTTTAGTCATTTTTTGACAGCGGCGCATtg < 1:18034814/35‑1 (MQ=255) cGGggttttttaattgtgctgcgcgaaagcagaca > 1:10309701‑M1/1‑3 (MQ=255) cGGggttttttaattgtgctgcgcgaaagcagaca > 1:9081978‑M1/1‑3 (MQ=255) cGGggttttttaattgtgctgcgcgaaagcagaca > 1:6147075‑M1/1‑3 (MQ=255) cGGTTTTTAGTCATTTTTTGACAGCGGCGCATtgt > 1:979406/1‑35 (MQ=255) cGGTTTTTAGTCATTTTTTGACAGCGGCGCATtgt < 1:911950/35‑1 (MQ=255) cGGTTTTTAGTCATTTTTTGACAGCGGCGCATtgt > 1:8768002/1‑35 (MQ=255) cGGTTTTTAGTCATTTTTTGACAGCGGCGCATtgt < 1:7496073/35‑1 (MQ=255) cGGTTTTTAGTCATTTTTTGACAGCGGCGCATtgt < 1:7398207/35‑1 (MQ=255) cGGTTTTTAGTCATTTTTTGACAGCGGCGCATtgt < 1:5276950/35‑1 (MQ=255) cGGTTTTTAGTCATTTTTTGACAGCGGCGCATtgt < 1:5531864/35‑1 (MQ=255) ggggttttttaattgtgctgcgcgaaagcagacaa > 1:17716208‑M1/1‑2 (MQ=255) ggggttttttaattgtgctgcgcgaaagcagacaa > 1:11531696‑M1/1‑2 (MQ=255) ggggttttttaattgtgctgcgcgaaagcagacaa > 1:10960839‑M1/1‑2 (MQ=255) ggggttttttaattgtgctgcgcgaaagcagacaa > 1:17449606‑M1/1‑2 (MQ=255) ggggttttttaattgtgctgcgcgaaagcagacaa < 1:18486562‑M1/35‑34 (MQ=255) ggTTTTTAGTCATTTTTTGACAGCGGCGCATtgtg < 1:14603376/35‑1 (MQ=255) ggTTTTTAGTCATTTTTTGACAGCGGCGCATtgtg > 1:18532487/1‑35 (MQ=255) gggttttttaattgtgctgcgcgaaagcngacaan > 1:516685‑M1/1‑1 (MQ=255) gggttttttaattgtgctgcgcgaaagcagacaac > 1:18655976‑M1/1‑1 (MQ=255) gggttttttaattgtgctgcgcgaaagcagacaac > 1:5411627‑M1/1‑1 (MQ=255) gTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGc > 1:18137725/1‑35 (MQ=255) gTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGc > 1:13220581/1‑35 (MQ=255) | GAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGC > REL606/2017649‑2017717 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |