Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,268,052 | IS150 (+) +3 bp | 55.8% | intergenic (‑83/+42) | yhbE ← / ← rpmA | conserved inner membrane protein/50S ribosomal protein L27 |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2775877 | NA (NA) | 38 (0.370) | 25/48 | NT | 49.4% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | = 3268054 | 34 (0.380) | intergenic (‑85/+42) | yhbE/rpmA | conserved inner membrane protein/50S ribosomal protein L27 | |||||
* | ? | REL606 | 3268052 = | 34 (0.380) | 48 (0.470) | 29/48 | NT | 55.3% | intergenic (‑83/+44) | yhbE/rpmA | conserved inner membrane protein/50S ribosomal protein L27 |
? | REL606 | = 3652533 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 159 total aligned reads displayed.
TTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTCATCCGTTACCGGGAC > REL606/3268020‑3268086 | tttttACCGGTTATCGAATGTAAAAAGCCCCGCaa < 1:5566672/35‑1 (MQ=255) ttttACCGGTTATCGAATGTAAAAAGCCACGCAAc < 1:6522793/35‑1 (MQ=255) tttACCGGTTATCGAATGTAAAAAGCCCCGCAAtg > 1:11497409‑M2/1‑33 (MQ=255) tttACCGGTTATCGAATGTAAAAAGCCCCGCAACg < 1:15756781/35‑1 (MQ=255) tttACCGGTTATCGAATGTAAAAAGCCCCGCAACg < 1:16379932/35‑1 (MQ=255) ttACCGGTTATCGAATGTAAAAAGCCCCGCAAtgt > 1:20447394‑M2/1‑32 (MQ=255) ttACCGGTTATCGAATGTAAAAAGCCCCGCAACgt < 1:8750121/35‑1 (MQ=255) taactgtccaactttttggggtcagtacaCAACgt > 1:10769922‑M1/30‑35 (MQ=255) taactgtccaactttttggggtcagtacaCAACgt > 1:3651220‑M1/30‑35 (MQ=255) aactgtccaactttttggggtcagtacaCAACgtg > 1:2697478‑M1/29‑35 (MQ=255) aactgtccaactttttggggtcagtacaCAACgtg < 1:7453917‑M1/7‑1 (MQ=255) aactgtccaactttttggggtcagtacaCAACgtg > 1:12826620‑M1/29‑35 (MQ=255) aactgtccaactttttggggtcagtacaCAACgtg < 1:4356313‑M1/7‑1 (MQ=255) aCCGGTTATCGAATGTAAAAAGCCCCGCAAtgtac > 1:18610760‑M2/1‑30 (MQ=255) aCCGGTTATCGAATGTAAAAAGCCCCGCAAtgtac > 1:1148609‑M2/1‑30 (MQ=255) aCCGGTTATCGAATGTAAAAAGCCCCGCAAtgtac > 1:17645126‑M2/1‑30 (MQ=255) aCCGGTTATCGAATGTAAAAAGCCCCGCAACgtgt < 1:6850194/35‑1 (MQ=255) ctgtccaactttttggggtcagtacaCAACGTGtt > 1:19215082‑M1/27‑35 (MQ=255) cGGTTATCGAATGTAAAAAGCCCCGCAAtgtactg > 1:4729959‑M2/1‑28 (MQ=255) cGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTg < 1:15206587/35‑1 (MQ=255) gtccaactttttggggtcagtacaCAACGTGTTGc < 1:10431436‑M1/11‑1 (MQ=255) gtccaactttttggggtcagtaaaCAACGTGTTGc > 1:16660830‑M1/25‑35 (MQ=255) tccaactttttggggtcagtacaCAACGTGTTGCg < 1:9376649‑M1/12‑1 (MQ=255) tccaactttttggggtcagtacaCAACGTGTTGCg < 1:3331791‑M1/12‑1 (MQ=255) tccaactttttggggtcagtacaCAACGTGTTGCg > 1:6357173‑M1/24‑35 (MQ=255) tccaactttttggggtcagtacaCAACGTGTTGCg < 1:16989526‑M1/12‑1 (MQ=255) tccaactttttggggtcagtacaCAACGTGTTGCg < 1:1143899‑M1/12‑1 (MQ=255) gTTATCGAATGTAAAAAGCCCCGCAAtgtactgca > 1:14325273‑M2/1‑26 (MQ=255) ttATCGAATGTAAAAAGCCCCGCAAtgtactgcac > 1:18817018‑M2/1‑25 (MQ=255) ttATCGAATGTAAAAAGCCCCGCAACGTGTTGCgg < 1:4114918/35‑1 (MQ=255) ttATCGAATGTAAAAAGCCCCGCAACGTGTTGCgg < 1:20188670/35‑1 (MQ=255) tATCGAATGTAAAAAGCCCCGCAAtgtactgcacc < 1:849764‑M2/35‑12 (MQ=255) tATCGAATGTAAAAAGCCCCGCAAtgtactgcacc > 1:14735308‑M2/1‑24 (MQ=255) caactttttggggtcagtacaCAACGTGTTGCggg > 1:17598118‑M1/22‑35 (MQ=255) caactttttggggtcagtacaCAACGTGTTGCggg > 1:8959860‑M1/22‑35 (MQ=255) aactttttggggtcagtacaCAACGTGTTGCgggg > 1:18347758‑M1/21‑35 (MQ=255) aactttttggggtcagtacaCAACGTGTTGCgggg > 1:7653166‑M1/21‑35 (MQ=255) aactttttggggtcagtacaCAACGTGTTGCgggg > 1:11024705‑M1/21‑35 (MQ=255) aactttttggggtcagtacaCAACGTGTTGCgggg > 1:19921337‑M1/21‑35 (MQ=255) actttttggggtcagtacaCAACGTGTTGCGGGGc < 1:9488957‑M1/16‑1 (MQ=255) cGAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCt < 1:5781899/35‑1 (MQ=255) tttttggggtcagtacaCAACGTGTTGCGGGGCtt > 1:4288141‑M1/18‑35 (MQ=255) gAATGTAAAAAGCCCCGCAAtgtactgcacccatt > 1:18604190‑M2/1‑20 (MQ=255) gAATGTAAAAAGCCCCGCAAtgtactgcacccatt < 1:15613222‑M2/35‑16 (MQ=255) gAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCtt > 1:17859730/1‑35 (MQ=255) aaTGTAAAAAGCCCCGCAAtgtactgcacccattt > 1:12658612‑M2/1‑19 (MQ=255) aaTGTAAAAAGCCCCGCAAtgtactgcacccattt < 1:10682877‑M2/35‑17 (MQ=255) aaTGTAAAAAGCCCCGCAAtgtactgcacccattt > 1:15872774‑M2/1‑19 (MQ=255) aaTGTAAAAAGCCCCGCAAtgtactgcacccattt < 1:19756304‑M2/35‑17 (MQ=255) aaTGTAAAAAGCCCCGCAACGTGTTGCGGGGCttt > 1:11877322/1‑35 (MQ=255) aaTGTAAAAAGCCCCGCAACGTGTTGCGGGGCttt > 1:18423565/1‑35 (MQ=255) aaTGTAAAAAGCCCCGCAACGTGTTGCGGGGCttt > 1:15229860/1‑35 (MQ=255) tttggggtcagtacaCAACGTGTTGCGGGGCTTTc < 1:13854953‑M1/20‑1 (MQ=255) aTGTAAAAATCCCCGCAAtgtactgcacccatttt < 1:11941712‑M2/35‑18 (MQ=255) aTGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTc < 1:586458/35‑1 (MQ=255) aTGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTc < 1:8608319/35‑1 (MQ=255) aTGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTc > 1:17186451/1‑35 (MQ=255) aTGTAAAAACCCCCGCAACGTGTTGCGGGGCTTTc < 1:4552284/35‑1 (MQ=255) tGTAAAAAGCCCCGCAAtgtactgcacccattttg > 1:10099151‑M2/1‑17 (MQ=255) tGTAAAAAGCCCCGCAAtgtactgcacccattttg < 1:5054627‑M2/35‑19 (MQ=255) tGTAAAAAGCCCCGCAAtgtactgcacccattttg < 1:8219094‑M2/35‑19 (MQ=255) tGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTCa > 1:774887/1‑35 (MQ=255) tggggtcagtacaCAACGTGTTGCCGGGCTTTCAt < 1:1299321‑M1/22‑1 (MQ=255) gTAAAAAGCCCCGCAAtgtactgcacccattttgt < 1:17717788‑M2/35‑20 (MQ=255) ggggtcagtacaCAACGTGTTGCGGGGCTTtcact < 1:3295140‑M1/23‑3 (MQ=255) ggggtcagtacaCAACGTGTTGCGGGGCTTTCATc < 1:6545206‑M1/23‑1 (MQ=255) gggtcagtacaCAACGTGTTGCGGGGCTTTCAtca > 1:4807978‑M1/12‑34 (MQ=255) gggtcagtacaCAACGTGTTGCGGGGCTTTCATcc < 1:14179613‑M1/24‑1 (MQ=255) ggtcagtacaCAACGTGTTGCGGGGCTTtcatacg > 1:3351831‑M1/11‑32 (MQ=255) ggtcagtacaCAACGTGTTGCGGGGCTTTCATCCg > 1:6201692‑M1/11‑35 (MQ=255) aaaaGCCCCGCAACGTGTTGCGGGGCTTTCATCCg > 1:5590563/1‑35 (MQ=255) aaaaGCCCCGCAACGTGTTGCGGGGCTTTCATCCg < 1:9880190/35‑1 (MQ=255) aaaaGCCCCGCAACGTGTTGCGGGGCTTTCATCCg > 1:2447000/1‑35 (MQ=255) aaaGCCCCGCAAtgtactgcacccattttgttgga < 1:10087971‑M2/35‑24 (MQ=255) tcagtacaCAACGTGTTGCGGGGCTTTCATCCGtt > 1:2695101‑M1/9‑35 (MQ=255) aaGCCCCGCAAtgtactgcacccattttgttggac > 1:4989790‑M2/1‑11 (MQ=255) aaGCCCCGCAAtgtactgcacccattttgttggac > 1:19764337‑M2/1‑11 (MQ=255) aaGCCCCGCAACGTGTTGCGGGGCTTTCATCCGtt > 1:14636224/1‑35 (MQ=255) aaGCCCCGCAACGTGTTGCGGGGCTTTCATCCGtt > 1:12173631/1‑35 (MQ=255) aGCCCCGCAACGTGTTGCGGGGCTTTCATCCGCTa > 1:6061535/1‑35 (MQ=255) gCCCCGCAACGTGTTGCGGGGCTTTCATCCGTTAc > 1:13637121/1‑35 (MQ=255) gCCCCGCAACGTGTTGCGGGGCTTTCATCCGTTAc > 1:1110051/1‑35 (MQ=255) gtacaCAACGTGTTGCGGGGCTTTCATCCGTTAcc < 1:18346802‑M1/30‑1 (MQ=255) ccccGCAAtgtactgcacccattttgttggacgat < 1:2607192‑M2/35‑28 (MQ=255) ccccGCAACGTGTTGCGGGGCTTTCATCCGTTAcc < 1:584048/35‑1 (MQ=255) cccGCAAtgtactgcacccattttgttggacgatg > 1:14222585‑M2/1‑7 (MQ=255) cccGCAACGTGTTGCGGGGCTTTCATCCGTTACCg > 1:13946212/1‑35 (MQ=255) cccGCAACGTGTTGCGGGGCTTTCATCCGTTACCg > 1:17091795/1‑35 (MQ=255) ccGCAACGTGTTGCGGGGCTTTCATCCGTTACCgg > 1:18805721/1‑35 (MQ=255) acaCAACGTGTTGCGGGGCTTTCATCCGTTACCgg < 1:3563329‑M1/32‑1 (MQ=255) caCAACGTGTTGCGGGGCTTTCATCCGTTACCggg < 1:5699747‑M1/33‑1 (MQ=255) caCAACGTGTTGCGGGGCTTTCATCCGTTACCggg > 1:10655271‑M1/3‑35 (MQ=255) cGCAAtgtactgcacccattttgttggacgattaa < 1:19849863‑M2/35‑31 (MQ=255) cGCAACGTGTTGCGGGGCTTTCATCCGTTACCggg < 1:16354432/35‑1 (MQ=255) aCAACGTGTTGCGGGGCTTTCATCCGTTACCGGGa < 1:613789‑M1/34‑1 (MQ=255) aCAACGTGTTGCGGGGCTTTCATCCGTTACCGGGa > 1:20553488‑M1/2‑35 (MQ=255) cAACGTGTTGGGGGGCTTTCATCCGTTACCGGGAc < 1:11125126/35‑1 (MQ=255) cAACGTGTTGCGGGGCTTTCATCCGTTACCGGGAc < 1:6869334/35‑1 (MQ=255) cAACGTGTTGCGGGGCTTTCATCCGTTACCGGGAc > 1:17255076/1‑35 (MQ=255) cAACGTGTTGCGGGGCTTTCATCAGTTACCGGGAc < 1:1695394/35‑1 (MQ=255) | TTTTTACCGGTTATCGAATGTAAAAAGCCCCGCAACGTGTTGCGGGGCTTTCATCCGTTACCGGGAC > REL606/3268020‑3268086 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |