New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 10617 = | 104 (1.010) | 21 (0.220) | 7/44 | NT | 21.3% | intergenic (‑125/+24) | yaaH/yaaW | conserved inner membrane protein associated with acetate transport/hypothetical protein |
? | REL606 | = 3622975 | 60 (0.640) | coding (1754/2619 nt) | yhjO | cellulose synthase, catalytic subunit |
Only 100 of 160 total aligned reads displayed.
CACCGTTTCGTAGATTTCACTCCAGAAAGAGTGGCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAGGCT > REL606/3622941‑3623009 | cACCGTTTCGTAGATTTCACTCCAGAAAGAGTGGc > 1:15161385/1‑35 (MQ=255) cACCGTTTCGTAGATTTCACTCCAGAAAGAGTGGc > 1:5531555/1‑35 (MQ=255) aCCGTTTCGTAGATTTCACTCCAGAAAGAGTGGCg < 1:1686012‑M2/35‑2 (MQ=255) aCCGTTTCGTAGATTTCACTCCAGAAAGAGTGGCg > 1:13306068‑M2/1‑34 (MQ=255) aCCGTTTCGTAGATTTCACTCCAGAAAGAGTGGCg > 1:12525073‑M2/1‑34 (MQ=255) aCAGTTTCGTAGATTTCACTCCAGAAAGAGTGGCg > 1:3263566‑M2/1‑34 (MQ=255) ccGTTTCGTAGATTTCACTCCAGAAAGAGTGGCga > 1:6029163‑M2/1‑33 (MQ=255) ccGTTTCGTAGATTTCACTCCAGAAAGAGTGGCga < 1:6662738‑M2/35‑3 (MQ=255) cGTTTCGTAGATTTCACTCCAGAAAGAGTGGCgaa < 1:6391249‑M2/35‑4 (MQ=255) cGTTTCGTAGATTTCACTCCAGAAAGAGTGGCG‑at < 1:15753324/35‑1 (MQ=255) cGTTTCGTAGATTTCACTCCAGAAAGAGTGGCG‑at < 1:5559326/35‑1 (MQ=255) cGTTTCGTAGATTTCACTCCAGAAAGAGTGGCG‑at < 1:6919561/35‑1 (MQ=255) gTTTCGTAGATTTCACTCCAGAAAGAGTGGCgaaa < 1:1731451‑M2/35‑5 (MQ=255) gTTTCGTAGATTTCACTCCAGAAAGAGTGGCgaaa < 1:6130639‑M2/35‑5 (MQ=255) gTTTCGTAGATTTCACTCCAGAAAGAGTGGCG‑ata < 1:19799532/35‑1 (MQ=255) gTTTCGTAGATTTCACTCCAGAAAGAGTGGCG‑ata < 1:198845/35‑1 (MQ=255) gTTTCGTAGATTTCACTCCAGAAAGAGTGGCG‑ata < 1:6699336/35‑1 (MQ=255) gTTTCGTAGATTTCACTCCAGAAAGAGAGGGG‑ata > 1:333786/1‑35 (MQ=25) tttCGTAGATTTCACTCCAGAAAGAGTGGCgaaat < 1:20338110‑M2/35‑6 (MQ=255) tttCGTAGATTTCACTCCAGAAAGAGTGGCgaaaa < 1:3471007‑M2/35‑6 (MQ=255) tttCGTAGATTTCACTCCAGAAAGAGTGGCgaaaa < 1:2189055‑M2/35‑6 (MQ=255) tttCGTAGATTTCACTCCAGAAAGAGTGGCG‑atat < 1:10895796/35‑1 (MQ=255) ttCGTAGATTTCACTCCAGAAAGAGTGGCgaaaat < 1:16675147‑M2/35‑7 (MQ=255) ttCGTAGATTTCACTCCAGAAAGAGTGGCgaaaat < 1:16364700‑M2/35‑7 (MQ=255) ttCGTAGATTTCACTCCAGAAAGAGTGGCG‑ATAtt < 1:4185882/35‑1 (MQ=255) tCGTAGATTTCACTCCAGAGAGAGTGGCG‑ATAttt < 1:10431075/35‑1 (MQ=255) tCGTAGATTTCACTCCAGAAAGAGTGGCgaaattt < 1:4602214‑M2/35‑8 (MQ=255) tCGTAGATTTCACTCCAGAAAGAGTGGCgaaaatt < 1:3289514‑M2/35‑8 (MQ=255) tCGTAGATTTCACTCCAGAAAGAGTGGCG‑ATAttt < 1:8520398/35‑1 (MQ=255) tCGTAGATTTCACTCCAGAAAGAGTGGCG‑ATAttt < 1:18254612/35‑1 (MQ=255) cGTAGATTTCGCTCGAGAAAGAGTGGCG‑ATATTTg < 1:20585611/35‑1 (MQ=37) cGTAGATTTCACTCCAGAAATAGTGGCgaaaattt < 1:5448265‑M2/35‑9 (MQ=255) cGTAGATTTCACTCCAGAAAGAGTGGCgaaatttt < 1:1475611‑M2/35‑9 (MQ=255) cGTAGATTTCACTCCAGAAAGAGTGGCgaaaattt < 1:942644‑M2/35‑9 (MQ=255) cGTAGATTTCACTCCAGAAAGAGTGGCgaaaattt < 1:7923782‑M2/35‑9 (MQ=255) cGTAGATTTCACTCCAGAAAGAGTGGCgaaaatta < 1:15618902‑M2/35‑9 (MQ=255) cGTAGATTTCACTCCAGAAAGAGTGGCgaaaaatt < 1:4953566‑M2/35‑9 (MQ=255) cGTAGATTTCACTCCAGAAAGAGTGGCG‑ATATTTg < 1:7363224/35‑1 (MQ=255) gTAGATTTCACTCCAGAAAGAGTGGCgaaaatttt < 1:18612228‑M2/35‑10 (MQ=255) gTAGATTTCACTCCAGAAAGAGTGGCG‑ATATTTGc < 1:6129453/35‑1 (MQ=255) tAGATTTCACTCCAGAAAGAGTGGCG‑ATATTTGcc < 1:8450753/35‑1 (MQ=255) tAGATTTCACTCCAGAAAGAGTGGCG‑AAACTTgtc > 1:17824461/1‑33 (MQ=25) aGATTTCACTCCAGAAAGAGTGGCG‑ATATTTGccc < 1:4869134/35‑1 (MQ=255) aGATTTCACTCCAGAAAGAGTGGCG‑AAAAATGccc > 1:15604494/1‑35 (MQ=25) gATTTCACTCCATAAAGAGTGGCG‑AAAATTTCCCt > 1:18696466/1‑35 (MQ=16) gATTTCACTCCAGAAAGAGTGGCgaaaattttccc < 1:17051944‑M2/35‑13 (MQ=255) gATTTCACTCCAGAAAGAGTGGCG‑ATATTTGCCCt < 1:12964702/35‑1 (MQ=255) gATTTCACTCCAGAAAGAGTGGCG‑ATATTTGCCCt < 1:3668381/35‑1 (MQ=255) gATTTCACTCCAGAAAGAGTGGCG‑ATATTTGCCCt < 1:6993105/35‑1 (MQ=255) gATTTCACTCAAGAAAGAGTGGCG‑ATATTTGCCCt < 1:11373528/35‑1 (MQ=255) aTTTCACTCCAGAAAGAGTGGCgaaaattttccct < 1:5092523‑M2/35‑14 (MQ=255) aTTTCACTCCAGAAAGAGTGGCG‑ATATTTGCCCTg < 1:15992563/35‑1 (MQ=255) tttCACTCCAGAAAGAGTGGCgaaaaatttccccg < 1:13651601‑M2/35‑15 (MQ=255) tttCACTCCAGAAAGAGTGGCG‑ATATTTGCCCTgg < 1:1110765/35‑1 (MQ=255) tttCACTCCAGAAAGAGTGGCG‑ATATTTGCCCTgg < 1:7467936/35‑1 (MQ=255) ttCACTCCAGAAAGAGTGGCgaaaattttccccgg < 1:7508146‑M2/35‑16 (MQ=255) ttCACTCCAGAAAGAGTGGCGAAAATTTCCCCTga > 1:8757662/1‑34 (MQ=12) ttCACTCCAGAAAGAGTGGCG‑ATATTTGCCCTGGa < 1:1429012/35‑1 (MQ=255) tCACTCCAGAAAGAGTGGCG‑ATATTTGCCCTGGAt < 1:9761406/35‑1 (MQ=255) tCACTCCAGAAAGAGTGGCG‑ATATTTGCCCTGGAt < 1:12581099/35‑1 (MQ=255) tCACTCCAGAAAGAGTGGCG‑ATATTTGCCCTGGAt < 1:17859817/35‑1 (MQ=255) tCACTCCAGAAAGAGTGGCG‑ATATTTGCCCAGGAt < 1:9009198/35‑1 (MQ=255) tCACTCCAGAAAGAGTGGCG‑AAAATTTTCCTgggt > 1:10982974/1‑33 (MQ=12) cACTCCAGAAAGAGTGGCG‑ATATTTGCCCTGGATn < 1:5923234/35‑1 (MQ=255) cACTCCAGAAAGAGTGGCG‑ATATTTGCCCTGGATc < 1:18906409/35‑1 (MQ=255) cTCCAGAAAGAGTGGCG‑ATATTTGCCCTGGATCtt < 1:12480107/35‑1 (MQ=255) cTCCAGAAAGAGTGGCG‑ATATTTGCCCTGGATCtt < 1:19465311/35‑1 (MQ=255) cTCCAGAAAGAGTGGCG‑ATATTTGCCCTGGATCtt < 1:19404823/35‑1 (MQ=255) tCCAGAAAGAGTGGCG‑ATATTTGCCCTGGATCTTg < 1:10008840/35‑1 (MQ=255) tCCAGAAAGAGTGGCG‑ATATTTGCCCTGGATCTTg < 1:1348536/35‑1 (MQ=255) tCCAGAAAGAGTGGCG‑ATATTTGCCCTGGATCTTg < 1:8052518/35‑1 (MQ=255) ccAGAAAGAGTGGCG‑ATATTTGCCCTGGATCTTgg < 1:9043436/35‑1 (MQ=255) ccAGAAAGAGTGGCG‑ATATTTGCCCTGGATCTTgg < 1:17233681/35‑1 (MQ=255) aGAAAGAGTGGCG‑ATATTTGCCCTGGATCTTGGAg < 1:12144817/35‑1 (MQ=255) aaaGAGTGGCG‑ATATTTGCCCTGGATCTTGGAGtt < 1:4416807/35‑1 (MQ=255) aaGAGTTGCG‑ATATTTGCCCTGGATCTTGGAGTTg > 1:20062632/1‑35 (MQ=255) aaGAGTGGCG‑ATATTTGCCCTGGATCTTGGAGTTg < 1:8658466/35‑1 (MQ=255) aaGAGTGGCG‑ATATTTGCCCTGGATCTTGGAGTTg < 1:12608897/35‑1 (MQ=255) agagTTGCG‑ATATTTGCCCTGGATCTTGGAGTTgg > 1:11328048/1‑35 (MQ=255) agTGGCG‑ATATTTGCCCTGGATCTTGGAGTTGGTc < 1:580981/35‑1 (MQ=255) agTGGCG‑ATATTTGCCCTGGATCTTGGAGTTGGTc < 1:20178404/35‑1 (MQ=255) gTGGCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCa < 1:16419103/35‑1 (MQ=255) gTGGCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCa < 1:1773516/35‑1 (MQ=255) gTGGCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCa < 1:8624305/35‑1 (MQ=255) gTGGCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCa < 1:9243076/35‑1 (MQ=255) tGGCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAg < 1:15923261/35‑1 (MQ=255) tGGCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAg < 1:1742532/35‑1 (MQ=255) tGGCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAg > 1:4519680/1‑35 (MQ=255) ggCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAgg < 1:13639886/35‑1 (MQ=255) ggCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAgg > 1:14997985/1‑35 (MQ=255) ggCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAgg < 1:1512844/35‑1 (MQ=255) ggCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAgg < 1:3895636/35‑1 (MQ=255) ggCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAgg < 1:20498347/35‑1 (MQ=255) gCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAGGc < 1:14433411/35‑1 (MQ=255) gCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAGGc < 1:15497160/35‑1 (MQ=255) cG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAGGCt > 1:7945907/1‑35 (MQ=255) cG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAGGCt < 1:15064616/35‑1 (MQ=255) cG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAGGCt < 1:4804987/35‑1 (MQ=255) cG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAGGCt < 1:10901813/35‑1 (MQ=255) cG‑ATATTTGCCCTGGATCTTGGAGTTGGCCAGGCt > 1:11038575/1‑35 (MQ=255) | CACCGTTTCGTAGATTTCACTCCAGAAAGAGTGGCG‑ATATTTGCCCTGGATCTTGGAGTTGGTCAGGCT > REL606/3622941‑3623009 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |