New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3092326 = | 61 (0.590) | 23 (0.240) | 8/44 | NT | 23.7% | coding (505/927 nt) | yqhG | hypothetical protein |
? | REL606 | 4085858 = | 92 (0.980) | intergenic (+56/‑93) | cpxP/fieF | periplasmic protein combats stress/ferrous iron efflux protein F |
ATGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3092361‑3092326 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGGGGTTTTTTTTA > REL606/4085858‑4085870 ATGTTCAAAGAGTTCGGCAACAACGGCTTCCGGCT < 1:16211774/35‑1 ATGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCT > 1:10402276/1‑35 ATGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCT > 1:8682151/1‑35 ATGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCT > 1:8103511/1‑35 ATGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCT > 1:5303383/1‑35 ATGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCT < 1:19408107/35‑1 ATGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCT < 1:12525459/35‑1 ATGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCT < 1:18180531/35‑1 ATGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCT > 1:1646053/1‑35 TGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGGTG > 1:9439520/1‑35 TGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTG < 1:9890379/35‑1 TGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTG > 1:5023200/1‑35 TGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTG > 1:4829462/1‑35 TGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTG < 1:3896765/35‑1 TGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTG < 1:19193322/35‑1 TGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTG < 1:18896467/35‑1 TGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTG < 1:11384898/35‑1 GTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTGG > 1:13159319/1‑35 GTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTGG > 1:960855/1‑35 GTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTGG > 1:13143798/1‑35 GTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTGG > 1:12301482/1‑35 GTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTGG > 1:19893287/1‑35 TCAAAGAGTTCGGCAACAAAGGCTTCCGGCTGctc > 1:3059224/1‑32 TCAAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGN > 1:4861133/1‑35 TCAAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGG > 1:17677181/1‑35 TCAAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGG > 1:2273978/1‑35 TCAAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGG > 1:12277635/1‑35 TCAAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGG > 1:12228793/1‑35 CAAAGAGTTCTGCAACAAAGGCTTCCGGCTGGGGG > 1:19560510/1‑35 CAAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGGG > 1:1100226/1‑35 CAAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGGG > 1:20074789/1‑35 CAAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGGG > 1:8172736/1‑35 AAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGGGg > 1:11891871/1‑34 AAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGGGg > 1:11798468/1‑34 AAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGGGg > 1:6171822/1‑34 AAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGGGg > 1:8425348/1‑34 AAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGGGg > 1:18428014/1‑34 AAAGAGTTCGGCAACAAAGGCTTCCGGCTGGGGGT > 1:6635426/1‑35 AAGAGTTCGGCAACAAAGGCTTCCGGCTGGGGGTT > 1:16179302/1‑35 AGAGTTCGGCAACAAAGGCTTCCGGCTGGGGGTTT > 1:8190845/1‑35 AGAGTTCGGCAACAAAGGCTTCCGGCTGGGGGTTT > 1:4785668/1‑35 AGAGTTCGGCAACAAAGGCTTCCGGCTGGGGGTTT > 1:8821663/1‑35 GAGTTCGGCAACAAATGCTTCCGGCTGGGGGTTTT > 1:4014834/1‑35 GAGTTCGGCAACAAAGGCTTCCGGCTGGGGGTTTT > 1:10554707/1‑35 GAGTTCGGCAACAAAGGCTTCCGGCTGGGGGTTTT > 1:10478704/1‑35 GAGTTCGGCAACAAAGGCTTCCGGCTGGGGGGTTT > 1:18653352/1‑35 AGTTCGGCAACAAAGTCTTCCGGCTGGGGGTTTTT > 1:10958569/1‑35 AGTTCGGCAACAAAGGCTTCCGGCTGGGGGTTTTT > 1:7359708/1‑35 AGTTCGGCAACAAAGGCTTCCGGCTGGGGGTTTTT > 1:16990271/1‑35 AGTTCGGCAACAAAGGCTTCCGGCTGGGGGGTTTT > 1:18699186/1‑35 GTTCGGCAACAAAGGCTTCCGGCTGGGGGTTTTTT > 1:5448958/1‑35 TTCGGCAACAAAGGCTTCCGGCTGGGGGTTTTTTT > 1:8915614/1‑35 TTCGGCAACAAAGGCTTCCGGCTGGGGGGTTTTTT > 1:14856549/1‑35 TCGGCAACAAAGGCTTCCGGCTGGGGGTTTTTTTT > 1:6055660/1‑35 TCGGCAACAAAGGCTTCCGGCTGGGGGTTTTTTTT > 1:8333684/1‑35 TCGGCAACAAAGGCTTCCGGCTGGGGGTTTTTTTT > 1:10865020/1‑35 TCGGCAACAAAGGCTTCCGGCTGGGGGTTTTTTTT > 1:1857658/1‑35 TCGGCAACAAAGGCTTCCGGCTGGGGGGTTTTTTa > 1:475822/1‑34 TCGGCAACAAAGGCTTCCGGCTGGGGGGTTTTTTT > 1:3593266/1‑35 TCGGCAACAAAGGCTTCCGGCTGGGGGGTTTTTTT > 1:952132/1‑35 CGGCAACAAAGGCTTCCGGCTGGGGGTTTTTTTTA > 1:17420118/1‑35 ATGTTCAAAGAGTTCGGCAACAAAGGCTTCCGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3092361‑3092326 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGGGGTTTTTTTTA > REL606/4085858‑4085870 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |