New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 9903 | 115 (1.120) | 22 (0.220) | 8/46 | NT | 23.0% | intergenic (+12/+23) | mogA/yaaH | molybdenum cofactor biosynthesis protein/conserved inner membrane protein associated with acetate transport |
? | REL606 | = 1095351 | 37 (0.380) | intergenic (‑185/‑238) | putA/putP | fused DNA‑binding transcriptional regulator/proline dehydrogenase/pyrroline‑5‑carboxylate dehydrogenase/proline:sodium symporter |
Only 100 of 239 total aligned reads displayed.
CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTC > REL606/9869‑9937 | cAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC < 1:6943112‑M1/35‑1 (MQ=255) cAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC < 1:17505532‑M1/35‑1 (MQ=255) cAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC > 1:3703000‑M1/1‑35 (MQ=255) cAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC < 1:7826596‑M1/35‑1 (MQ=255) aaGACGCGACGTTAGCGAATAAAAAAATCCCCCCG < 1:17067420‑M1/35‑1 (MQ=255) aGACGCGACGTTAGCGAATAAAAAAATCCCCCCGa > 1:4186057/1‑35 (MQ=255) gACGCGACGTTAGCGAATAAAAAAATCCCCCCGAg < 1:17417379/35‑1 (MQ=255) gACGCGACGTTAGCGAATAAAAAAATCCCCCCGAg < 1:14678745/35‑1 (MQ=255) aCGCGACGTTAGCGAATAAAAAAATCCCCCCGAGc < 1:12458399/35‑1 (MQ=255) cgcgACGTTAGCGAATAAAAAAATCCCCCCGAGCg > 1:20020440/1‑35 (MQ=255) cgcgACGTTAGCGAATAAAAAAATCCCCCCGAGCg > 1:13133146/1‑35 (MQ=255) gcgACGTTAGCGAATAAAAAAATCCCCCCGAGCgg > 1:3765187/1‑35 (MQ=255) gcgACGTTAGCGAATAAAAAAATCCCCCCGAGCgg > 1:12242551/1‑35 (MQ=255) cgACGTTAGCGAATAAAAAAATCCCCCCGAGCggg < 1:17910549/35‑1 (MQ=255) gACGTTAGCGAATAAAAAAATCCCCCCGAGCgggg > 1:6458885/1‑35 (MQ=255) gACGTTAGCGAATAAAAAAATCCCCCCGAGCgggg > 1:18269575/1‑35 (MQ=255) gACGTTAGCGAATAAAAAAATCCCCCCGAGCgggg < 1:17155308/35‑1 (MQ=255) gACGTTAGCGAATAAAAAAATCCCCCCGAGCgggg > 1:16324165/1‑35 (MQ=255) aCGTTAGCGAATAAAAAAATCCCCCCGAGCggggg > 1:17731138/1‑35 (MQ=255) aCGTTAGCGAATAAAAAAATCCCCCCAAGCggggg > 1:16703965/1‑35 (MQ=255) cGTTAGCGAATAAAAAAATCCCCCCGAGCgggggg > 1:16012113/1‑35 (MQ=255) gTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGa > 1:6977793/1‑35 (MQ=255) gTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGa > 1:7498019/1‑35 (MQ=255) ttAGCGAATAAAAAAATCCCCCCGAGCGGGGGGAt < 1:20189688/35‑1 (MQ=255) ttAGCGAATAAAAAAATCCCCCCGAGCGGGGGGAt < 1:16553532/35‑1 (MQ=255) tAGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtc < 1:3483711/35‑1 (MQ=255) aGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtct < 1:18787298/35‑1 (MQ=255) aGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtct < 1:9808305/35‑1 (MQ=255) aGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtct < 1:6480802/35‑1 (MQ=255) aGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtct < 1:19061486/35‑1 (MQ=255) gCGAATAAAAAAATCCCCCCGAGCTGGGGGAtctc > 1:18383514/1‑35 (MQ=255) gCGAATAAAAAAATCCCCCCGAGCGGGGGGAtctc < 1:18167621/35‑1 (MQ=255) gCGAATAAAAAAATCCCCCCGAGCGGGGGGAtctc > 1:2434816/1‑35 (MQ=255) cGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCa < 1:1127225/35‑1 (MQ=255) cGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCa > 1:14968017/1‑35 (MQ=255) cGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCa < 1:12999511/35‑1 (MQ=255) gAATAAAAAAATCCCCCCGAGCGGGGGGATCTCaa < 1:6895415/35‑1 (MQ=255) aaTAAAAAAATCCCCCCGAGCTGGGGGATCTCaaa > 1:20422161/1‑35 (MQ=255) aaTAAAAAAATCCCCCCGAGCGGTGGGATCTCaaa > 1:11694793/1‑35 (MQ=255) aaTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaa > 1:8183378/1‑35 (MQ=255) aaTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaa < 1:17736269/35‑1 (MQ=255) aTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaaa < 1:6349180/35‑1 (MQ=255) aTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaaa > 1:8550817/1‑35 (MQ=255) aaaaaaaTCCCCCCGcccgtcagggcggttgtcat < 1:5907627‑M1/35‑21 (MQ=255) aaaaaaaTCCCCCCGAGCGGGGGGATCTCAAAACa < 1:4092722/35‑1 (MQ=255) aaaaaaaTCCCCCCGAGCGGGGGGATCTCAAAACa > 1:6049599/1‑35 (MQ=255) aaaaaaaTCCCCCCGAGCGGGGGGATCTCAAAACa < 1:148823/35‑1 (MQ=255) aaaaaaaTCCACCCGcccgtcagggcggttgtcat < 1:10391100‑M1/35‑21 (MQ=255) aaaaaaTCCCCCCGAGCGGGGGGATCTCAAAACaa > 1:8972050/1‑35 (MQ=255) aaaaaaCCCCCCCtgccgcagagaaaaagtctgag < 1:9127101‑M1/35‑23 (MQ=255) aaaaaTCCCCCCtgccgcagagaaaaagtctgagt < 1:4792748‑M1/35‑24 (MQ=255) aaaaaTCCCCCCGAGCGGGGGGATCTCAAAACAAt > 1:5722446/1‑35 (MQ=255) aaaaaTCCCCCCGAGCGGGGGGATCTCAAAACAAt > 1:7855197/1‑35 (MQ=255) caaatCCCCCCGcccgtcagggcggttgtcatatg < 1:20251378‑M1/34‑24 (MQ=255) aaatTCCCCCCtgccgcagagaaaaagtctgagtt < 1:14431954‑M1/35‑25 (MQ=255) aaaaTCCCCCCtgccgcagagaaaaagtctgagtt < 1:16605153‑M1/35‑25 (MQ=255) aaaaTCCCCCCtgccgcagagaaaaagtctgagtt < 1:11470188‑M1/35‑25 (MQ=255) aaaaTCCCCCCGAGCGGGGGGATCTCAAAACAAtt < 1:16685088/35‑1 (MQ=255) aaaaTCCACCCGcccgtcagggcggttgtcatatg < 1:9230855‑M1/35‑24 (MQ=255) aaaaGCCCCCCGAGCGGGGGGATCTCAAAACAAtt < 1:12887035/35‑1 (MQ=255) aaaTCCCCCCGAGCGGGGGGATCTCAAAACAATTa > 1:17284613/1‑35 (MQ=255) aaaTCCCCCCGAGCGGGGGGATCTCAAAACAATTa > 1:10645503/1‑35 (MQ=255) aaaTCCCCCCGAGCGGGGGGATCTCAAAACAATTa > 1:9905422/1‑35 (MQ=255) aaaTCCACCCGcccgtcagggcggttgtcatatgg < 1:16888636‑M1/35‑25 (MQ=255) atccccccctgccgcagagaaaaagtctgagttat < 1:11628459‑M1/32‑27 (MQ=255) aaTCCCCCCGAGCGGGGGGATCTCAAAACAATTAg > 1:14351235/1‑35 (MQ=255) aTCCCCCCtgccgcagagaaaaagtctgagttatt < 1:15154420‑M1/35‑28 (MQ=255) aTCCCCCCGAGCGGGGGGATCTCAAAACAATTAGt > 1:10240874/1‑35 (MQ=255) aTCCCCCCGAGCGGGGGGATCTCAAAACAATTAGt > 1:3027811/1‑35 (MQ=255) tCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTg < 1:10987006/35‑1 (MQ=255) tCCACCCGcccgtcagggcggttgtcatatggagt < 1:19881034‑M1/35‑28 (MQ=255) tccccctgccgcagagaaaaagtctgagttatttt < 1:8427068‑M1/34‑30 (MQ=255) cccgccGAGCGGGGGGATCTCAAAACAATTAGTgg < 1:14118456/35‑1 (MQ=255) cccccctgccgcagagaaaaagtctgagttatttt < 1:9429627‑M1/35‑30 (MQ=255) ccccccGcccgtcagggcggttgtcatatggagta < 1:13694448‑M1/35‑29 (MQ=255) ccccccGAGCGGGGGGATCTCAAAACAATTAGTgg < 1:7437016/35‑1 (MQ=255) ccccccGAGCGGGGGGATCTCAAAACAATTAGTgg > 1:3076954/1‑35 (MQ=255) ccccccGAGCGGGGGGATCTCAAAACAATTAGTgg > 1:2081854/1‑35 (MQ=255) acccccgcccgtcagggcggttgtcatatggagta < 1:4623038‑M1/34‑29 (MQ=255) cccccGAGCGGGGGGATCTCAAAACAATTAGTggg > 1:19644124/1‑35 (MQ=255) cccctgccgcagagaaaaagtctgagttatttttt < 1:9307513‑M1/35‑32 (MQ=255) ccccGcccgtcagggcggttgtcatatggagtaca < 1:5335882‑M1/35‑31 (MQ=255) ccccGAGCGGGGTGATCTCAAAATAATTAGTGGGa > 1:2162982/1‑35 (MQ=37) ccccGAGCGGGGGGATCTCAAAACAATTAGTGGGa > 1:19230474/1‑35 (MQ=255) ccccGAGCGGGGGGATCTCAAAACAATTAGTGGGa > 1:20481994/1‑35 (MQ=255) ccctgccgcagagaaaaagtctgagttattttttt < 1:15307348‑M1/35‑33 (MQ=255) cccgcccgtcagggcggttgtcatatggagtacag < 1:7352113‑M1/35‑32 (MQ=255) cccgcccgtcagggcggttgtcatatggagtacag < 1:20309400‑M1/35‑32 (MQ=255) cccGAGCGGGGGGATCTCAAAACAATTAGTGGGAt < 1:17373286/35‑1 (MQ=255) cccGAGCGGGGGGATCTCAAAACAATTAGTGGGAt < 1:12080364/35‑1 (MQ=255) cccGAGCGGGGGGATCTCAAAACAATTAGTGGGAt > 1:6678723/1‑35 (MQ=255) cctgccgcagagaaaaagtctgagttattttttta < 1:16782255‑M1/35‑34 (MQ=255) ccGAGCGGGGGGATCTCAAAACAATTAGTGGGaag > 1:8883247/1‑33 (MQ=255) ccGAGCGGGGGGATCTCAAAACAATTAGTGGGAtt > 1:7611554/1‑35 (MQ=255) ccGAGCGGGGGGATCTCAAAACAATTAGTGGGAtt < 1:18346697/35‑1 (MQ=255) ccGAGCGGGGGGATCTCAAAACAATTAGTGGGAtt < 1:1948968/35‑1 (MQ=255) ctgccgcagagaaaaagtctgagttatttttttaa < 1:16242753‑M1/35‑35 (MQ=255) ctgccgaagagaaaaagtctgagttatttttttaa < 1:4935071‑M1/35‑35 (MQ=255) cGAGCGGGGGGATCTCAAAACAATTAGTGGGATTc < 1:1554415/35‑1 (MQ=255) cGAGCGGGGGGATCTCAAAACAATTAGTGGGATTc < 1:1477725/35‑1 (MQ=255) | CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTC > REL606/9869‑9937 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |