New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3310921 | 77 (0.750) | 8 (0.110) | 3/34 | NT | 15.0% | coding (824/1068 nt) | degS | serine endoprotease, periplasmic |
? | REL606 | 4603001 = | 36 (0.490) | coding (287/780 nt) | yjjV | predicted DNase |
Only 100 of 134 total aligned reads displayed.
CTGGAAAGGCGTCCGGCGAAGGTGGTGGCGGTGGGGGAGATCGGTCTGGATCTCTTTGGCGACGATCCG > REL606/4602967‑4603035 | gctagatcgcaccactgcacgcacagagcggtggg > 1:3494836‑M2/35‑35 (MQ=255) gcgagatcgcaccactgcacgcacagagcggtggg > 1:13177332‑M2/35‑35 (MQ=255) cTGGAAAGGCGTCCGGCGAAGGTGGTGGCGGGggg > 1:19107417/1‑35 (MQ=255) cTGGAAAGGCGTCCGGCGAAGGTGGTGGCGGGggg > 1:15963607/1‑35 (MQ=255) tGGAAAGGCGTCCGGCGAAGGTGGTGGCGGTgggn < 1:14369719/35‑1 (MQ=255) tGGAAAGGCGTCCGGCGAAGGTGGTGGCGGTgggg < 1:19543446/35‑1 (MQ=255) tGGAAAGGCGTCCGGCGAAGGTGGTGGCGGTgggg < 1:20344894/35‑1 (MQ=255) tGGAAAGGCGTCCGGCGAAGGTGGTGGCGGGgggg > 1:8449922/1‑35 (MQ=255) tGGAAAGGCGTCCGGCGAAGGTGGCGGCGGGgggg > 1:17021445/1‑35 (MQ=37) cgagatcgcaccactgcacgcacagagcggtgggg > 1:3848001‑M2/34‑35 (MQ=255) cgagatcgcaccactgcacgcacagagcggtgggg > 1:20425053‑M2/34‑35 (MQ=255) cgagatcgcaccactgcacgcacagagcggtgggg > 1:6531210‑M2/34‑35 (MQ=255) cgagatcgcaccactgcacgcacagagcggtgggg > 1:1393830‑M2/34‑35 (MQ=255) ggAAAGGCGTCCGGCGAAGGTGGTGGCGGTggggg < 1:11849950/35‑1 (MQ=255) ggAAAGGCGTCCGGCGAAGGTGGTGGCGGGggggg > 1:3046141/1‑35 (MQ=255) ggAAAGGCGTCCGGCGAAGGTGGTGGCGGGggggg > 1:9409046/1‑35 (MQ=255) gagatcgcaccactgcacgcacagagcggtggggt > 1:318886‑M2/33‑34 (MQ=255) gagatcgcaccactgcacgcacagagcggtggggt > 1:2155901‑M2/33‑34 (MQ=255) gagatcgcaccactgcacgcacagagcggtggggg > 1:14453017‑M2/33‑35 (MQ=255) gAAAGGCGTCCGGCGAAGGTGGTGGCGGTGGGGga < 1:19669093/35‑1 (MQ=255) gAAAGGCGTCCGGCGAAGGTGGTGGCGGGgggggg > 1:17700354/1‑34 (MQ=255) gAAAGGCGTCCGGCGAAGGTGGTGGCGGGgggggg > 1:8113485/1‑34 (MQ=255) gAAAGGCGTCCGGCGAAGGTGGTGGCGGGgggggg > 1:13976668/1‑34 (MQ=255) agatcgcaccactgcacgcacagagcggtggggtc > 1:8604518‑M2/32‑33 (MQ=255) agatcgcaccactgcacgcacagagcggtggggta > 1:4172561‑M2/32‑33 (MQ=255) gatcgcaccactgcacgcacagagcggtggggtat > 1:8811627‑M2/31‑32 (MQ=255) gatcgcaccactgcacgcacagagcggtggggccc > 1:18632016‑M2/31‑32 (MQ=255) gatcgcaccactgcacgcacagagcggtggGGtag > 1:5295713‑M2/31‑35 (MQ=255) gatcgcaccactgcacgcacagagcggtggGGtag > 1:17451229‑M2/31‑35 (MQ=255) aaaGGCGTCCGGCGAATGTGGTGGCGGGggggggg > 1:674749/1‑33 (MQ=25) aaaGGCGTCCGGCGAAGGTGGTGGCGGTGGGGgag < 1:1860072/35‑1 (MQ=255) atcgcaccactgcacgcacagagcggtggGggagg > 1:4472139‑M2/30‑34 (MQ=255) atcgcaccactgcacgcacagagcggtggGGgaga > 1:14187439‑M2/30‑35 (MQ=255) aaGGCGTCCGGCGAAGGTGGTGGCGGTGGGGgaga < 1:17362679/35‑1 (MQ=255) aaGGCGTCCGGCGAAGGTGGTGGCGGGgggggggg > 1:11119547/1‑32 (MQ=25) tcgcaccactgcacgcacatagcggtggGGGAGAt > 1:16464277‑M2/29‑35 (MQ=255) tcgcaccactgcacgcacagagcggtggGGGAGAt > 1:4171119‑M2/29‑35 (MQ=255) aGGCGTCCGGCGAAGGTGGTGGCGGTGGGGGAGAt < 1:7374509/35‑1 (MQ=255) aGGCGTCCGGCGAAGGTGGTGGCGGTGGGGGAGAt < 1:7791771/35‑1 (MQ=255) ggCGTCCGGCGAAGGTGGTGGCGGTGGGGGAGATc < 1:19716839/35‑1 (MQ=255) cgcaccactgcacgcacagagcggtggGGTAGATc > 1:7283460‑M2/28‑35 (MQ=255) cgcaccactgcacgcacagagcggtggGGGAGATc > 1:7308086‑M2/28‑35 (MQ=255) cGTCCGGCGAAGGTGGTGGCGGTGGGGGAGATCgg < 1:16931553/35‑1 (MQ=255) cGTCCGGCGAAGGTGGTGGCGGTGGGGGAGATCgg < 1:5387158/35‑1 (MQ=255) gTCCGGCGAAGGTGGTGGCGGTGGGGGAGATCGGt < 1:4848495/35‑1 (MQ=255) tcgggCGAAGGTGGTGGCGGTGGGGGAGATCGGTc < 1:2512280/32‑1 (MQ=255) tCCGGCGAAGGTGGTGGCGGTGGGGGAGATCGGTc < 1:18015557/35‑1 (MQ=255) ccGGCGAAGGTGGTGGCGGTGGGGGAGATCGGTCt < 1:347260/35‑1 (MQ=255) ccGGCGAAGGTGGTGGCGGTGGGGGAGATCGGTCt < 1:6214694/35‑1 (MQ=255) cGGCGAAGGTGGTGGCGGTGGGGGAGATCGGTCTg < 1:3773344/35‑1 (MQ=255) ggCGAAGGTGGTGGCGGTGGGGGAGATCGGTCTgg < 1:10657205/35‑1 (MQ=255) gCGAAGGTGGTGGCGGTGGGGGAGATCGGTCTGGa < 1:15491641/35‑1 (MQ=255) gCGAAGGTGGTGGCGGTGGGGGAGATCGGTCTGGa < 1:11011818/35‑1 (MQ=255) gAAGGTGGTGGCGGTGGGGGAGATCGGTCTGGAtc < 1:15164971/35‑1 (MQ=255) aaGGTGGTGGCGGTGGGGGAGATCGGTCTGGAtct < 1:4184163/35‑1 (MQ=255) aaGGTGGTGGCGGTGGGGGAGATCGGTCTGGAtct < 1:10362175/35‑1 (MQ=255) aaGGTGGTGGCGGTGGGGGAGATCGGTCTGGAtct < 1:14352743/35‑1 (MQ=255) aaGGTGGTGGCGGTGGGGGAGATCGGTCTGGAtct < 1:14793806/35‑1 (MQ=255) ggtggtGGCGGTGGGGGAGATCGGTCTGGATctct < 1:7308667/35‑1 (MQ=255) ggtggtGGCGGTGGGGGAGATCGGTCTGGATctct < 1:17183890/35‑1 (MQ=255) gtggtgGCGGTGGGGGAGATCGGTCTGGATCTCtt < 1:9534947/35‑1 (MQ=255) gtggtgGCGGTGGGGGAGATCGGTCTGGATCTCtt < 1:1243045/35‑1 (MQ=255) gtggtgGCGGTGGGGGAGATCGGTCTGGATCTCtt < 1:1338075/35‑1 (MQ=255) gtggtgGCGGTGGGGGAGATCGGTCTGGATCTCtt < 1:14680428/35‑1 (MQ=255) gtggtgGCGGTGGGGGAGATCGGTCTGGATCTCtt < 1:5871345/35‑1 (MQ=255) tggtggCGGTGGGGGAGATCGGTCTGGATCTCttt < 1:14701539/35‑1 (MQ=255) tggtggCGGTGGGGGAGATCGGTCTGGATCTCttt < 1:15031882/35‑1 (MQ=255) ggtggCGGTGGGGGAGATCGGTCTGGATCTCTTTg < 1:9758543/35‑1 (MQ=255) ggtggCGGTGGGGGAGATCGGTCTGGATCTCTTTg < 1:7934103/35‑1 (MQ=255) gtggCGGTGGGGGAGATCGGTCTGGATCTCTTTgg < 1:11241051/35‑1 (MQ=255) tggCGGTGGGGGAGATCGGTCTGGATCTCTTTGGc < 1:15007143/35‑1 (MQ=255) tggCGGTGGGGGAGATCGGTCTGGATCTCTTTGGc < 1:6079628/35‑1 (MQ=255) tggCGGTGGGGGAGATCGGTCTGGATCTCTTTGGc < 1:13537285/35‑1 (MQ=255) ggCGGTGGGGGAGATCGGTCTGGATCTCTTTGGcg < 1:2629998/35‑1 (MQ=255) ggCGGTGGGGGAGATCGGTCTGGATCTCTTTGGcg < 1:7703537/35‑1 (MQ=255) ggCGGTGGGGGAGATCGGTCTGGATCTCTTTGGcg < 1:11970024/35‑1 (MQ=255) gcggtggGGGAGATCGGTCTGGATCTCTTTGGcga < 1:4416061‑M2/28‑1 (MQ=255) gcggtggGGGAGATCGGTCTGGATCTCTTTGGcga > 1:4960205‑M2/8‑35 (MQ=255) gcggtggGGGAGATCGGTCTGGATCTCTTTGGcga < 1:7444084‑M2/28‑1 (MQ=255) gcggtggGGGAGATCGGTCTGGATCTCTTTGGcga < 1:5546286‑M2/28‑1 (MQ=255) gccgtggGGGAGATCGGTCTGGATCTCTTTGGcga < 1:1307703‑M2/28‑1 (MQ=255) ggtggGGGAGATCGGTCTGGATCTCTTTGGcgacg < 1:14099307‑M2/30‑1 (MQ=255) ggtggGGGAGATCGGTCTGGATCTCTTTGGcgacg < 1:18024013‑M2/30‑1 (MQ=255) ggtggGGGAGATCGGTCTGGATCTCTTTGGcgacg < 1:13274254‑M2/30‑1 (MQ=255) gtgtGGGAGATCGGTCTGGATCTCTTTGGcgacga > 1:18349812‑M2/5‑35 (MQ=255) gtggGGGAGATCGGTCTGGATCTCTTTGGcgacga > 1:19591123‑M2/5‑35 (MQ=255) gtggGGGAGATCGGTCTGGATCTCTTTGGcgacga < 1:15287085‑M2/31‑1 (MQ=255) tggGGGAGATCGGTCTGTATCTCTTTGGCGACGAt > 1:8540497‑M2/4‑35 (MQ=255) tggGGGAGATCGGTCTGGATCTCTTTGGCGACGAt < 1:10611201‑M2/32‑1 (MQ=255) ggGGGAGATCGGTCTGGATCTCTTTGGCGACGATc > 1:915197‑M2/3‑35 (MQ=255) ggGGGAGATCGGTCTGGATCTCTTTGGCGACGATc > 1:6848534‑M2/3‑35 (MQ=255) ggGGGAGATCGGTCTGGATCTCTTTGGCGACGATc > 1:16633455‑M2/3‑35 (MQ=255) ggGGGAGATCGGTCTGGATCTCTTTGGCGACGATc > 1:4464402‑M2/3‑35 (MQ=255) ggGGGAGATCGGTATGGATCTCTTTGGCGACGATc > 1:3518159‑M2/3‑35 (MQ=255) gGGGAGATCGGTCTGGATCTCTTTGGCGACGATcc > 1:18051980‑M2/2‑35 (MQ=255) gGGGAGATCGGTCTGGATCTCTTTGGCGACGATcc > 1:14712836‑M2/2‑35 (MQ=255) gGGGAGATCGGTCTGGATCTCTTTGGCGACGATcc < 1:4708660‑M2/34‑1 (MQ=255) gGGGAGATCGGTCTGGATCTCTTTGGCGACGATcc > 1:3187240‑M2/2‑35 (MQ=255) gggAGATCGGTCTGGATCTCTTTGGCGACGATCCg > 1:4019222/1‑35 (MQ=255) gggAGATCGGTCTGGATCTCTTTGGCGACGATCCg > 1:20366441/1‑35 (MQ=255) | CTGGAAAGGCGTCCGGCGAAGGTGGTGGCGGTGGGGGAGATCGGTCTGGATCTCTTTGGCGACGATCCG > REL606/4602967‑4603035 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |