New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2962019 = | 71 (0.690) | 12 (0.160) | 4/34 | NT | 19.5% | coding (1189/1278 nt) | yggP | predicted dehydrogenase |
? | REL606 | 3792210 = | 49 (0.670) | coding (316/414 nt) | ECB_03532 | hypothetical protein |
Only 100 of 167 total aligned reads displayed.
CGACACGCCGAACGAGCCGAACCGCTTCGGCTGGGTGGGGGAAATCGATCCATATGGTTATTTTTCAGA > REL606/3792176‑3792244 | ttccattttgctggcacgagaaaacttcggctggg > 1:2513761‑M2/34‑35 (MQ=255) ctgttcctgcaatacacgcagcaacttcgggtggg > 1:824909‑M2/34‑35 (MQ=255) ctgttcctgcaatacacgcagcaacttcggctggg > 1:6090207‑M2/34‑35 (MQ=255) ctgttcctgcaatacacgcagcaacttcggctggg > 1:12678453‑M2/34‑35 (MQ=255) ataattttacagccagcaggaagttagcggctggg > 1:14859057‑M2/35‑35 (MQ=255) tgttcctgcaatacacgcagcaacttcggctgggg > 1:10015394‑M2/33‑34 (MQ=255) tgttcctgcaatacacgcagcaacttcggctgggg > 1:18518801‑M2/33‑34 (MQ=255) tgttcctgcaatacacgcagcaacttcggctgggg > 1:13227504‑M2/33‑34 (MQ=255) tccattttgctggcacgagaaaacttcggctgggg > 1:9638748‑M2/33‑34 (MQ=255) tccattttgctggcacgagaaaacttcggctgggg > 1:786004‑M2/33‑34 (MQ=255) gacACGCCGAACGAGCCTAACCGCTTCGGCtgggg > 1:7252879/1‑34 (MQ=255) gttcctgcaatacacgcagcaacttcggctggggg > 1:16889909‑M2/32‑33 (MQ=255) gttcctgcaatacacgcagcaacttcggctggggg > 1:19564377‑M2/32‑33 (MQ=255) gttcctgcaatacacgcagcaacttcggctggggg > 1:20240763‑M2/32‑33 (MQ=255) gttcctgcaatacacgcagcaacttcggctggggg > 1:5513499‑M2/32‑33 (MQ=255) gttcctgcaatacacgcagcaacttcggctgggac > 1:14853295‑M2/32‑33 (MQ=255) aattttacagccagcaggaagttagcggctggggg > 1:13270661‑M2/33‑33 (MQ=255) ttcctgcaatacacgcagcaacttcggctgggggg > 1:2765371‑M2/31‑35 (MQ=255) ttcctgcaatacacgcagcaacttcggctgggggg > 1:11644745‑M2/31‑35 (MQ=255) ttcctgcaatacacgcagcaacttcggctgggggg > 1:10455857‑M2/31‑35 (MQ=255) gatccgctgtttaaagagttggcgcggctgggggg > 1:1355159‑M2/32‑35 (MQ=255) gatccgctgtttaaagagttggcgcggctgggggg > 1:15363002‑M2/32‑35 (MQ=255) cattttgctggcacgagaaaacttcggctggggcg > 1:1234235‑M2/31‑32 (MQ=255) attttacagccagcaggaagttagcggctgggtgg > 1:3805542‑M2/32‑35 (MQ=255) ttttacagccagcaggaagttagcggctgggtggg > 1:1828605‑M2/31‑35 (MQ=255) ttttacagccagcaggaagttagcggctgggtggg > 1:17511086‑M2/31‑35 (MQ=255) ttttacagccagcaggaagttagcggctggggggg > 1:3284442‑M2/31‑35 (MQ=255) tcctgcaatacacgcagcaacttcggctggggggg > 1:1839989‑M2/30‑35 (MQ=255) attttgctggcacgagaaaacttcggctggggggg > 1:5622200‑M2/30‑35 (MQ=255) attttgctggcacgagaaaacttcggctggggggg > 1:19010381‑M2/30‑35 (MQ=255) ttttgctggcacgagaaaacttcggctgggggggc > 1:835127‑M2/29‑34 (MQ=255) ttttgctggcacgagaaaacttcggctgGGGgggg > 1:7376667‑M2/29‑35 (MQ=255) tttacagccagcaggaagttagcggctggGTgggg > 1:15179166‑M2/30‑35 (MQ=255) tttacagccagcaggaagttagcggctggCTgggg > 1:16482691‑M2/30‑35 (MQ=255) cctgcaatacacgcagcaacttcggctgggggggc > 1:6666308‑M2/29‑34 (MQ=255) cctgcaatacacgcagcaacttcggctgGGGgggg > 1:1977314‑M2/29‑35 (MQ=255) cctgcaatacacgcagcaacttcggctgGGGgggg > 1:7629614‑M2/29‑35 (MQ=255) tttgctggcacgagaaaacttcggctgGGGggggg > 1:16490765‑M2/28‑35 (MQ=255) ctgcaatacacgcagcaacttcggctgGGGggggg > 1:340565‑M2/28‑35 (MQ=255) ctgcaatacacgcagcaacttcggctgGGGggggg > 1:15418527‑M2/28‑35 (MQ=255) ccgctgtttaaagagttggcgcggctggGTggggg > 1:3095025‑M2/29‑35 (MQ=255) ttgctggcacgagaaaacttcggctgGGggggggc > 1:3193025‑M2/27‑34 (MQ=255) tgcaatacacgcagcaacttcggctgGGggggggg > 1:14210332‑M2/27‑34 (MQ=255) tgcaatacacgcagcaacttcggctgGGggggggg > 1:11034453‑M2/27‑34 (MQ=255) tgcaatacacgcagcaacttcggctgGGGGGGGGa > 1:1190238‑M2/27‑35 (MQ=255) cgctgtttaaagagttggcgcggctgggtggggaa > 1:738952‑M2/28‑33 (MQ=255) cgctgtttaaagagttggcgcggctggGTGAGGGa > 1:3368885‑M2/28‑35 (MQ=255) ccGAACGAGCCGAACCGCTTCGGCTGGGGGGGGGa > 1:9155747/1‑35 (MQ=255) gctgtttaaagagttggcgcggctggGTGGGGGaa > 1:5185258‑M2/27‑35 (MQ=255) cGAACGAGCCGAACCGCTTCGGCTGGGGGGGGGaa > 1:18699225/1‑35 (MQ=255) agAACGAACCGATCGGCTTTGTCGGGGTGGGGGat > 1:4440903/2‑34 (MQ=16) acagccagcaggaagttagcggctggGTGGGGGaa > 1:7128610‑M2/27‑35 (MQ=255) gAACGAGCCGAACCGCTTCGGCTGGGTGGGGGaaa > 1:12298654/1‑35 (MQ=255) gAACGAGCCGAACCGCTTCGGCTGGGGGGGGGgaa > 1:8077121/1‑35 (MQ=37) cagccagcaggaagttagcggctggGTGGGGAaaa > 1:251892‑M2/26‑35 (MQ=255) cagccagcaggaagttagcggctggCTGGGGGaaa > 1:19324930‑M2/26‑35 (MQ=255) aaggAGCCGACCCGCTTCGGCTGGGTGGGGGAAAt < 1:13064332/32‑1 (MQ=37) aaCGAGCCGAACCGCTTCGGCTGGGGGGGGGgaaa > 1:15908225/1‑34 (MQ=37) gtttaaagagttggcgcggctggGTGGGggaaagc > 1:9586665‑M2/24‑33 (MQ=255) gggAGCCGAACCGCTTCGGCTGGGTGGGGGAAATc < 1:12923334/33‑1 (MQ=255) ggAGCCGACCCGCTTCGGCTGGGTGGGGGAAATCg < 1:2447458/34‑1 (MQ=255) gAGCCGACCCGCTTCGGCTGGGTGGGGGAAATCGa < 1:5675628/35‑1 (MQ=255) gAGCCAACCCGCTTCGGCTGGGTGGGGGAAATCGa < 1:13010300/35‑1 (MQ=37) ggCCGACCCGCTTCGGCTGGGTGGGGGAAATCGAt < 1:13177454/34‑1 (MQ=255) cgCCGAACCGCTTCGGCTGGGTGGGGGAAATCGAt < 1:13566971/34‑1 (MQ=255) aGCCGAACCGCTTCGGCTGGGTGGGGGGAAACgct > 1:6622781/1‑33 (MQ=21) aGCCGAACCGCTTCGGCTGGGTGGGGGAAATCGAt < 1:4253547/35‑1 (MQ=255) gCCGACCCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:9395103/35‑1 (MQ=255) gCCGAACCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:7635466/35‑1 (MQ=255) gCCGAACCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:10618285/35‑1 (MQ=255) gCCGAACCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:6225987/35‑1 (MQ=255) cccGACCCGCTTCGGCTGGGTGGGGGAAATCGATc < 1:4511805/34‑1 (MQ=255) ccGAACCGCTTCGGCTGGGTGGGGGAAATAGATcc < 1:11698575/35‑1 (MQ=255) cGACCCGCTTCGGCTGGGTGGGGGAAATCGATCCa < 1:14565636/35‑1 (MQ=255) cGAACCGCTTCGGCTGGGTGGGGGAAATCGATCCa < 1:19226551/35‑1 (MQ=255) cGAACCGCTTCGGCTGGGCGGGGGAAATAGATCCa > 1:4002917/1‑35 (MQ=37) gAACCGCTTCGGCTGGGTGGGGGAAATCGATCCat < 1:11484526/35‑1 (MQ=255) gAACCGCTTCGGCTGGGTGGGGGAAATCGATCCat < 1:9472566/35‑1 (MQ=255) aCCGCTTCGGCTGGGTGGGGGAAATCGATCCatat < 1:10312132/35‑1 (MQ=255) aCCGCTTCGGCTGGGTGGGGGAAATCGATCCatat < 1:791244/35‑1 (MQ=255) aCCGCTTCGGCTGGGTGGGGGAAATCGATCCatat < 1:4754978/35‑1 (MQ=255) aCCGCTTCGGCTGGGTGGGGGAAATCGATCCatat > 1:4075402/1‑35 (MQ=255) aCCGCTTCGGCTGGGGGGGGGAAATCGATCCatat > 1:14054381/1‑35 (MQ=255) cGCTTCGGCTGGGTGGGGGAAATCGATCCATATgg < 1:4640023/35‑1 (MQ=255) cGCTTCGGCTGGGTGGGGGAAATCGATCCATATgg < 1:4447347/35‑1 (MQ=255) gCTTCGGCTGGGTGGGGGAAATCGATCCATATGGt < 1:15463170/35‑1 (MQ=255) tcggctgGGTGGGGGAAATCGATCCATATGGTTAt < 1:19013258‑M2/28‑1 (MQ=255) cggctggGTGGGGGAAATCGATCCATATGGTTAtt < 1:17922336‑M2/28‑1 (MQ=255) ggctggGTGGGGGAAATCGATACATATGGTTAttt < 1:20097486‑M2/29‑1 (MQ=255) gctggGTGGGGGAAATCGATCCATATGGTTAtttt < 1:1984745‑M2/30‑1 (MQ=255) gctggGTGGGGGAAATCGATCCATATGGTTAtttt < 1:1757506‑M2/30‑1 (MQ=255) ctggGTGGGGGAAATCGATCCATATGGTTAttttt < 1:7692850‑M2/31‑1 (MQ=255) ctggGTGGGGGAAATCGATCCATATGGTTAttttt < 1:20495253‑M2/31‑1 (MQ=255) tggGTGGGGGAAATCTATCCATATGGTTATTTTTc > 1:16041226‑M2/4‑35 (MQ=255) tggGTGGGGGAAATCGATCCATATGGTTATTTTTc > 1:13859242‑M2/4‑35 (MQ=255) caggtggtGGAAATCGATCCATATGGTTATTTTTc > 1:19305838/3‑35 (MQ=38) gGTGGGGGAAATCGATCCATATGGTTATTTTTCAg > 1:7544366‑M2/2‑35 (MQ=255) gGTGGGGGAAATCGATCCATATGGTTATTTTTCAg < 1:17461139‑M2/34‑1 (MQ=255) gGTGGGGGAAATCGATCCATATGGTTATTTTTCAg < 1:15877813‑M2/34‑1 (MQ=255) gtgggGGAAATCGATCCATATGGTTATTTTTCAGa > 1:18146859/1‑35 (MQ=255) | CGACACGCCGAACGAGCCGAACCGCTTCGGCTGGGTGGGGGAAATCGATCCATATGGTTATTTTTCAGA > REL606/3792176‑3792244 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |