Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 554,377 | 0 | T→G | 100.0% | 1.0 | 8 | V846G (GTG→GGG) | ECB_00512 | putative tail component of prophage |
Rejected: E-value exceeds prediction threshold. | ||||||||||
Reads supporting (aligned to +/- strand): new base (8/0): ref base (0/0): total (8/0) |
CCGTTTGACCGGCAAATTGTTATTCCGGCGGTGGCATTCAGTG > REL606/554346‑554388 | ccGTTTGACCGGCAAATTGTTATTCCGGCGGGggg > 1:18770711/1‑34 (MQ=0) ccGTTTGACCGGCAAATTGTTATTCCGGCGGGggg > 1:19852677/1‑34 (MQ=0) ccGTTTGACCGGCAAATTGTTATTCCGGCGGGggg > 1:6823129/1‑34 (MQ=0) ccGTTTGACCGACAAATTGTTATTCCGGCGGGggg > 1:9096549/1‑34 (MQ=1) cGTTTGACCGGCAAATTGTTATTCCGGCGGGgggg > 1:14057831/1‑33 (MQ=1) cGTTTGACCGGCAAATTGTTATTCCGGCGGGgggg > 1:9229100/1‑33 (MQ=1) gTTTGACCGGCAAATTGTTATTCCGGCGGGggggt > 1:2416254/1‑32 (MQ=1) gTTTGACCGGCAAATTGTTATTCCGGCGGGggggg > 1:11707805/1‑32 (MQ=1) gTTTGACCGGCAAATTGTTATTCCGGCGGGggggg > 1:1386296/1‑32 (MQ=1) gTTTGACCGGCAAATTGTTATTCCGGCGGCggggg > 1:2483861/1‑32 (MQ=1) ccGGCAAATTGTTATTCCGGCGGGGGGGGTCAGTg > 1:3681519/1‑35 (MQ=0) | CCGTTTGACCGGCAAATTGTTATTCCGGCGGTGGCATTCAGTG > REL606/554346‑554388 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |