New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2698091 = | 73 (0.710) | 6 (0.070) | 3/40 | NT | 9.3% | coding (1992/2145 nt) | nrdE | ribonucleotide‑diphosphate reductase alpha subunit |
? | REL606 | 3668825 = | 56 (0.650) | coding (873/2031 nt) | malS | periplasmic alpha‑amylase precursor |
Only 100 of 141 total aligned reads displayed.
GGACGAATCTTGATGCCAATATGGGCAACGAAGCCGATCTACGGACGCTGGTTGATAGCGCACATCAGC > REL606/3668791‑3668859 | ggACGAATCTTGATGCCAATATGGGCAACGAAGcc < 1:6921791/35‑1 (MQ=255) ggACGAATCTTGATGCCAATATGGGCAACGAAGcc > 1:16984949/1‑35 (MQ=255) ggACGAATCTTGATGCCAATATGGGCAACGAAGcc < 1:20545773/35‑1 (MQ=255) ggACGAATCTTGATGCCAATATGGGCAACGAAGcc < 1:10037538/35‑1 (MQ=255) ggACGAATCTTGATGCCAATATGGGCAACGAAGcc > 1:16393811/1‑35 (MQ=255) gACGAATCTTGATGCCAATATGGGCAACGAAGCCg > 1:6340327/1‑35 (MQ=255) gACGAATCTTGATGCCAATATGGGCAACGAAGCCg > 1:9523896/1‑35 (MQ=255) gACGAATCTTGATGCCAATATGGGCAACGAAGCCg > 1:2359645/1‑35 (MQ=255) aCGAATCTTGATGCCAATATGGGCAACGAAGCCGa > 1:17953516/1‑35 (MQ=255) cGAATCTTTATGCCAATATGGGCAACGAAGCCGAt > 1:1407956/1‑35 (MQ=255) cGAATCTTGATGCCAATATGGGCAACGAAGCCGAt > 1:3156607/1‑35 (MQ=255) gAATCTTGATGCCAATATGGGCAACGAAGCCGATc > 1:11744264/1‑35 (MQ=255) gAATCTTGATGCCAATATGGGCAACGAAGCCGATc > 1:15191869/1‑35 (MQ=255) gAATCTTGATGCCAATATGGGCAACGAAGCCGATc > 1:12519541/1‑35 (MQ=255) gAATCTTGATGCCAATATGGGCAACGAAGCCGATc > 1:3301106/1‑35 (MQ=255) gAATCTTGATGCCAATATGGGCAACGAAGCCGATc > 1:14659329/1‑35 (MQ=255) aaTCTTGATGCCAATATGGGCAACGAAGCCGATCt > 1:1668317/1‑35 (MQ=255) aaTCTTGATGCCAATATGGGCAACGAAGCCGATCt > 1:17398500/1‑35 (MQ=255) aTCTTGATGCCAATATGGGCAACTAAGCCGATCTa > 1:14687929/1‑35 (MQ=255) aTCTTGATGCCAATATGGGCAACGAAGCCGATCTa > 1:13516688/1‑35 (MQ=255) aTCTTGATGCCAATATGGGCAACGAAGCCGATCTa > 1:6445089/1‑35 (MQ=255) aTCTTGATGCCAATATGGGCAACGAAGCCGATCTa > 1:2782184/1‑35 (MQ=255) aTCTTGATGCCAATATGGGCAACGAAGCCGATCTa > 1:5006007/1‑35 (MQ=255) aTCTTGATGCCAATATGGGCAACGAAGCCGATCTa > 1:10092886/1‑35 (MQ=255) tCTTGATGCCAATATGGGCAACGAAGCCGATCTAc > 1:17739484/1‑35 (MQ=255) cTTGATGCCAATATGGGCAACGAAGCCGATCTACg > 1:1497711/1‑35 (MQ=255) cTTGATGCCAATATGGGCAACGAAGCCGATCTACg > 1:10312632/1‑35 (MQ=255) ttGATGCCAATATGGGCAACGAAGCCGATCTACgg > 1:13239681/1‑35 (MQ=255) ttGATGCCAATATGGGCAACGAAGCCGATCTACgg > 1:5871324/1‑35 (MQ=255) tGATGCCAATATGGGCAACGAAGCCGATCTACGGa > 1:1401440/1‑35 (MQ=255) tGATGCCAATATGGGCAACGAAGCCGATCTACGGa > 1:9253060/1‑35 (MQ=255) gATGCCAATATGGGCAACGAAGCCGATCTACTGAc > 1:7091320/1‑35 (MQ=255) tGCCAATATGGGCAACGAAGCCGATCTACGGACGc > 1:19957683/1‑35 (MQ=255) gCCAATATGGGCAATGAAGCCGATCTACGGACGCt > 1:1237589/1‑35 (MQ=255) gCCAATATGGGCAACGAAGCCGATCTACGGACGCt > 1:3886005/1‑35 (MQ=255) gCCAATATGGGCAACGAAGCCGATCTACGGACGCt > 1:1626024/1‑35 (MQ=255) gCCAATATGGGCAACGAAGCCGATCTACGGACGCt > 1:8126321/1‑35 (MQ=255) gCCAATATGGGCAACGAAGCCGATCTACGGACGCt > 1:10127855/1‑35 (MQ=255) ccAATATGGGCAACGAAGCCGATCTACGGACGCTg > 1:20589119/1‑35 (MQ=255) caaaTAGGGGAAAAAAAGCCGATCTACGGACGCTg < 1:13388490/33‑1 (MQ=16) cAATATGGGCAACGAAGCCGATCTACTGACGCTgg > 1:8716379/1‑35 (MQ=255) cAATATGGGCAACGAAGCCAATCTACTGACGCTgg > 1:7965817/1‑35 (MQ=37) aaTATGGGCAACGAAGCCGATCTACGGACGCTGGt > 1:3696333/1‑35 (MQ=255) tatGGGCAACGAAGCCGATCTACGGACGCTGGTTg > 1:4739450/1‑35 (MQ=255) tatGGGCAACGAAGCCGATCTACGGACGCTGGGTg > 1:1344024/1‑35 (MQ=255) taggggCAAAAAAGCCGATCTACGGACGCTGGTTg < 1:7383189/32‑1 (MQ=25) taggggCAAAAAAGCCGATCTACGGACGCTGGTTg < 1:19053312/32‑1 (MQ=25) gggggcaaaaaagcCGATCTACGGACGCTGGTTGa < 1:15571958‑M2/21‑1 (MQ=255) atGGGCAACGAAGCCGATCTACGGACGCTGGCTGa > 1:20185594/1‑35 (MQ=255) tgggaaaaaaagcCGATCTACGGACGCTGGTTGAt < 1:2190693‑M2/22‑1 (MQ=255) ggggaaaaaaagcCGATCTACGGACGCTGGTTGAt < 1:2921361‑M2/22‑1 (MQ=255) ggggCAACAAAGCCGATCTACGGACGCTGGTTGAt < 1:19954489/34‑1 (MQ=255) gggcaaaaaagcCGATCTACGGACGCTGGTTGATa < 1:9937222‑M2/23‑1 (MQ=255) gggCAACGAAGCCGATCTACGGACGCTGGTTGATa > 1:1896980/1‑35 (MQ=255) gggCAACGAAGCCGATCTACGGACGCTGGTTGATa > 1:13147693/1‑35 (MQ=255) ggCAACGAAGCCGATCTACGGACGCTGGTTGATAg > 1:1001736/1‑35 (MQ=255) ggCAACGAAGCCGATCTACGGACGCTGGTTGATAg > 1:49546/1‑35 (MQ=255) ggCAACGAAGCCGATCTACGGACGCTGGTTGATAg > 1:4848132/1‑35 (MQ=255) ggCAACAAAGCCGATCTACGGACGCTGGTTGATAg < 1:4510543/35‑1 (MQ=255) gaaaaaaagcCGATCTACGGACGCTGGTTGATAgc < 1:13022735‑M2/25‑1 (MQ=255) gCAACGAAGCCGATCTACGGACGCTGGTTGATAgc > 1:18104596/1‑35 (MQ=255) caaagaaagcCGATCTACGGACGCTGGTTGATAgc < 1:16148801‑M2/25‑1 (MQ=255) acaaaaaagcCGATCTACGGACGCTGGTTGATAgc < 1:18402055‑M2/25‑1 (MQ=255) aaaaaaaagcCGATCTACGGACGCTGGTTGATAgc < 1:17736070‑M2/25‑1 (MQ=255) aaaaaaaagcCGATCTACGGACGCTGGTTGATAgc < 1:16328580‑M2/25‑1 (MQ=255) cAACGAAGCCGATCTACGGACGCTGGTTGATAggg > 1:3884148/1‑33 (MQ=255) cAACGAAGCCGATCTACGGACGCTGGTCGATAgcg > 1:5316958/1‑35 (MQ=255) cAACAAAGCCGATCTACGGACGCTGGTTGATAgcg < 1:4404002/35‑1 (MQ=255) aaCGAAGCCGATCTACGGACGCTGGTTGATAgcgc > 1:4152275/1‑35 (MQ=255) aaCGAAGCCGATCTACGGACGCTGGTTGATAgcgc > 1:9765939/1‑35 (MQ=255) aaCGAAGCCGATCTACGGACGCTGGTTGATAgcgc > 1:2568177/1‑35 (MQ=255) acaaagcCGATCTACGGACGCTGGTTGATAGCGca < 1:7022865‑M2/28‑1 (MQ=255) aCGAAGCCGATCTACGGACGCTGGTTGATAGCGca > 1:9598018/1‑35 (MQ=255) aCGAAGCAGATCTACGGACGCTGGTTGATAGCGca < 1:15940671/35‑1 (MQ=255) caaagcCGATCTACGGACGCTGGTTGATAGCGcac < 1:5676354‑M2/29‑1 (MQ=255) cGAAGCCGATCTACGGACGCTGGTTGATAGCGcac > 1:8665726/1‑35 (MQ=255) aaaagcCGATCTACGGACGCTGGTTGATAGCGcac < 1:5344334‑M2/29‑1 (MQ=255) aaaagcCGATCTACGGACGCTGGTTGATAGCGcac < 1:8654633‑M2/29‑1 (MQ=255) aaaagcCGATCTACGGACGCTGGTTGATAGCGcac < 1:13597825‑M2/29‑1 (MQ=255) gAAGCCGATCTACGGACGCTGGTTGATAGCGcaca > 1:11473085/1‑35 (MQ=255) aaagcCGATCTACGGACGCTGGTTGATAGCGcaca < 1:4659174‑M2/30‑1 (MQ=255) aaagcCGATCTACGGACGCTGGTTGATAGCGcaca < 1:6989485‑M2/30‑1 (MQ=255) aaagcCGATCTACAGACGCTGGTTGATAGCGcaca < 1:5730130‑M2/30‑1 (MQ=255) aagcCGATCTACGGACGCTGGTTGATAGCGCACAt > 1:8590450‑M2/5‑35 (MQ=255) agcCGATCTACGGACGCTGGTTGATAGCGCACATc > 1:14541082‑M2/4‑35 (MQ=255) agcCGATCTACGGACGCTGGTTGATAGCGCACATc < 1:6930891‑M2/32‑1 (MQ=255) agcAGATCTACGGACGCTGGTTGATAGCGCACATc < 1:2210592‑M2/32‑1 (MQ=255) gcCGATCTACGGACGCTGGTTGATAGCGCACCTCa > 1:15895738‑M2/3‑35 (MQ=255) gcCGATCTACGGACGCTGGTTGATAGCGCACATCa > 1:1268475‑M2/3‑35 (MQ=255) gcCGATCTACGGACGCTGGTTGATAGCGCACATCa < 1:11179803‑M2/33‑1 (MQ=255) cCGATCTACGGACGCTGGTTGATAGCGCACATCAg < 1:3730529‑M2/34‑1 (MQ=255) cCGATCTACGGACGCTGGTTGATAGCGCACATCAg < 1:18424523‑M2/34‑1 (MQ=255) cCGATCTACGGACGCTGGTTGATAGCGCACATCAg > 1:3822356‑M2/2‑35 (MQ=255) cCGATCTACGGACGCTGGTTGATAGCGCACATCAg < 1:13839499‑M2/34‑1 (MQ=255) cCGATCTACGGACGCTGGTTGATAGCGCACATCAg < 1:9120566‑M2/34‑1 (MQ=255) cCGATCTACGGACGCTGGTTGATAGCGCACATCAg > 1:16468031‑M2/2‑35 (MQ=255) cGATCTACGGACGCTGGTTGATAGCGCACATCAgc > 1:736260/1‑35 (MQ=255) cGATCTACGGACGCTGGTTGATAGCGCACATCAgc > 1:10895575/1‑35 (MQ=255) cGATCTACGGACGCTGGTTGATAGCGCACATCAgc < 1:18941850/35‑1 (MQ=255) cGATCTACGGACGCTGGTTGATAGCGCACATCAgc < 1:2582577/35‑1 (MQ=255) | GGACGAATCTTGATGCCAATATGGGCAACGAAGCCGATCTACGGACGCTGGTTGATAGCGCACATCAGC > REL606/3668791‑3668859 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |