New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 469267 = | 124 (1.210) | 5 (0.060) | 3/42 | NT | 4.9% | coding (26/645 nt) | adk | adenylate kinase |
? | REL606 | 2766488 = | 87 (0.970) | coding (154/480 nt) | ispF | 2‑C‑methyl‑D‑erythritol 2,4‑cyclodiphosphate synthase |
ATGATGAACTGAGCCTGAGTCCCTTTCCCCGCGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/469303‑469267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgCCGCGCCAAGCAATGCATCGGTCAACGCATGGAG > REL606/2766488‑2766521 ATGATGAACTGAGCCTGAGTCCCTTTCCCCGCGCC < 1:10320535/35‑1 ATGATGAACTGAGCCTGAGTCCCTTTCCCCGCGCC > 1:5637148/1‑35 ATGATGAACTGAGCCTGAGTCCCTTTCCCCGCGCC < 1:6010172/35‑1 ATGATGAACTGAGCCTGAGTCCCTTTCCCCGCGCC > 1:13134411/1‑35 ATGATGAACTGAGCCTGAGTCCCTTTCCCCGCGCC < 1:14867379/35‑1 ATGATGAACTGAGCCTGAGTCCCTTACCCCGCGCC > 1:4055044/1‑35 TGATGAACTGAGCCTGAGTCCCTTTCCCCGCGCCC > 1:2806195/1‑35 TGATGAACTGAGCCTGAGTCCCTTTCCCCGCGCCC > 1:461474/1‑35 TGATGAACTGAGCCTGAGTCCCTTTCCCCGCGCCC < 1:6830449/35‑1 TGATGAACTGAGCCTGAGTCCCTTTCCCCGCGCCC > 1:8884441/1‑35 GATGAACTGAGCCTGAGTCCCTTTCCGCGCGCCCG < 1:7095743/35‑1 GATGAACTGAGCCTGAGTCCCTTTCCCCGCGCCCG > 1:10732934/1‑35 GATGAACTGAGCCTGAGTCCCTTTCCCCGCGCCCG < 1:11516420/35‑1 GATGAACTGAGCCTGAGTCCCTTTCCCCGCGCCCG < 1:15694843/35‑1 GATGAACTGAGCCTGAGTCCCTTTCCCCGCGCCCG < 1:953593/35‑1 GATGAACTGAGCCTGAGTCCCTTTCCCCGCGCCCG < 1:12949620/35‑1 GATGAACTGAGCCTGAGTCCCTTTCCCCGCGCCCG > 1:19913326/1‑35 CCCCGCGGCCGCCGCGCCAAGCAATGCATCGGTCA < 1:19522007/35‑1 CCCCGCCCCCGCCGCGCCAAGCAATGCATCGGTCA < 1:4136257/35‑1 CCCGCCCCCGCCGCGCCAAGCAATGCATCGGTCAA < 1:18273417/35‑1 CCCACGCCCGCCGCGCCAAGCAATGCATCGGTCAA < 1:5838443/35‑1 CCGCCCCCGCCGCGCCAAGCAATGCATCGGTCAAC < 1:8746087/35‑1 CGCCCCCGCCGCGCCAAGCAATGCATCGGTCAACG < 1:2906925/35‑1 cgcCCCGCCGCGCCAAGCAATGCATCGGTCAACGC < 1:2048712/32‑1 cccCCCGCCGCGCCAAGCAATGCATCGGTCAACGC < 1:12606907/32‑1 accCCCGCCGCGCCAAGCAATGCATCGGTCAACGC < 1:15187597/32‑1 ccCCCGCCGCGCCAAGCAATGCATCGGTCAACGCA < 1:17789710/33‑1 ccCCCGCCGCGCCAAGCAATGCATCGGTCAACGCA < 1:12646957/33‑1 ccCCCGCCGCGCCAAGCAATGCATCGGTCAACGCA < 1:13970206/33‑1 cCCCGCCGCGCCAAGCAATGCATCGGTCAACGCAT < 1:2218111/34‑1 cCCCGCCGCGCCAAGCAATGCATCGGTCAACGCAT < 1:15994825/34‑1 cCCCGCCGCGCCAAGCAATGCATCGGTCAACGCAT < 1:16948222/34‑1 CCCGCCGCGCCAAGCAATGCATCGGTCAACGCATG < 1:8821775/35‑1 CCCGCCGCGCCAAGCAATGCATCGGTCAACGCATG < 1:7111002/35‑1 CCCGCCGCGCCAAGCAATGCATCGGTCAACGCATG < 1:2870928/35‑1 CCCGCCGCGCCAAGCAATGCATCGGTCAACGCATG < 1:19941021/35‑1 caGCCGCGCCAAGCAATGCATCGGTCAACGCATGG < 1:4369203/33‑1 CCGCCGCGCCAAGCAATGCATCGGTCAATGCATGG < 1:17383741/35‑1 CCGCCGCGCCAAGCAATGCATCGGTCAACGCATGG < 1:13047498/35‑1 CCGCCGCGCCAAGCAATGCATCGGTCAACGCATGG > 1:8453194/1‑35 CCGCCGCGCCAAGCAATGCATCGGTCAACGCATGG < 1:8159953/35‑1 CCGCCGCGCCAAGCAATGCATCGGTCAACGCATGG < 1:7111015/35‑1 CCGCCGCGCCAAGCAATGCATCGGTCAACGCATGG < 1:15857273/35‑1 CGCCGCGCCAAGCAATGCATCGGTCAATGCATGGA > 1:4548580/1‑35 CGCCGCGCCAAGCAATGCATCGGTCAACGCATGGA < 1:5759617/35‑1 CGCCGCGCCAAGCAATGCATCGGTCAACGCATGGA > 1:5206887/1‑35 CGCCGCGCCAAGCAATGCATCGGTCAACGCATGGA < 1:9607184/35‑1 GCCGCGCCAAGCAATGCATCGGTCAACGTATGGAG > 1:19935025/1‑35 GCCGCGCCAAGCAATGCATCGGTCAACGCATGGAG > 1:19985029/1‑35 GCCGCGCCAAGCAATGCATCGGTCAACGCATGGAG > 1:7652317/1‑35 GCCGCGCCAAGCAATGCATCGGTCAACGCATGGAG > 1:7739226/1‑35 GCCGCGCCAAGCAATGCATCGGTCAACGCATGGAG < 1:19845236/35‑1 GCCGCGCCAAGCAATGCATCGGTCAACGCATGGAG > 1:15135733/1‑35 GCCGCGCCAAGCAATGCATCGGTCAACGCATGGAG > 1:1375961/1‑35 ATGATGAACTGAGCCTGAGTCCCTTTCCCCGCGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/469303‑469267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgCCGCGCCAAGCAATGCATCGGTCAACGCATGGAG > REL606/2766488‑2766521 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |