New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3615477 = | 121 (1.180) | 11 (0.110) | 4/48 | NT | 10.1% | coding (3189/3474 nt) | bcsC | cellulose synthase subunit |
? | REL606 | = 3947083 | 74 (0.720) | coding (724/1656 nt) | aslA | acrylsulfatase‑like enzyme |
CACGCACCAAAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3615490‑3615477 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGCCGTTCAGCAAAGATGACGTTCATGCCGTGC < REL606/3947083‑3947050 CACCCACCAAAACCCTGCCGTTCAGCAAAGATGAC < 1:5238842/35‑1 cacCACCAAAACCCTGCCGTTCAGCAAAGATGACG < 1:4704627/32‑1 accCACCAAAACCCTGCCGTTCAGCAAAGATGACG < 1:5558885/32‑1 ccgCCAAAACCCTGCCGTTCAGCAAAGATGACGTT < 1:16076943/32‑1 cCACCAAACCCCTGCCGTTCAGCAAAGATGACGTT < 1:15384373/34‑1 cCACCAAACCCCTGCCGTTCAGCAAAGATGACGTT < 1:17303595/34‑1 aaACCAAAACCCTGCCGTTCAGCAAAGATGACGTT < 1:13041534/33‑1 cccAAACCCTGCCGTTCAGCAAAGATGACGTTCAT < 1:9874127/32‑1 CCAAAACCCTGCCGTTCAGCAAAGATGACGTTCAT < 1:6753747/35‑1 CAAAACCCTGCCGTTCAGCAAAGATGACGTTCATG < 1:17485750/35‑1 AAACCCCTGCCGTTCAGCAAAGATGACGTTCATGC < 1:12826600/35‑1 AAAACCCTGCCGTTCAGCAAAGATGACGTTCATGC < 1:741744/35‑1 accCCCTGCCGTTCAGCAAAGATGACGTTCATGCC < 1:13436441/32‑1 aacCCCTGCCGTTCAGCAAAGATGACGTTCATGCC < 1:230793/32‑1 aacCCCTGCCGTTCAGCAAAGATGACGTTCATGCC < 1:10025650/32‑1 AAACCCTGCCGTTCAGCAAAGATGACGTTCATGCC < 1:4124910/35‑1 ccCCCTGCCGTTCAGCAAAGATGACGTTCATGCCG < 1:10053253/33‑1 acCCCTGCCGTTCAGCAAAGATGACGTTCATGCCG < 1:16437497/33‑1 acCCCTGCCGTTCAGCAAAGATGACGTTCATGCCG < 1:17752810/33‑1 cCCCTGCCGTTCAGCAAAGATGACGTTCATGCCGT < 1:3412097/34‑1 cCCCTGCCGTTCAGCAAAGATGACGTTCATGCCGT < 1:16518166/34‑1 ACCCTGCCGTTCAGCAAAGATGACGTTCATGCCGT < 1:3757545/35‑1 CCCTGCCGTTCAGCAAAGATGACGTTCATGCCGTG < 1:4069072/35‑1 CCCTGCCGTTCAGCAAAGATGACGTTCATGCCGTG < 1:16168894/35‑1 CCCTGCCGTTCAGCAAAGATGACGTTCATGCCGTG < 1:12131706/35‑1 CCCTGCCGTTCAGCAAAGATGACGTTCATGCCGTG < 1:6411379/35‑1 CCCTGCCGTTCAGCAAAGATGACGTTCATGCCGTG < 1:6600737/35‑1 CCCTGCCGTTCAGCAAAGATGACGTTCATGCCGTG < 1:10309945/35‑1 CCCTGCCGTTCAGCAAAGATGACGTTCATGCCGTG < 1:757128/35‑1 CCTGCCGTTCAGCAAAGATGACGTTCATGCCGTGC < 1:3672730/35‑1 CCTGCCGTTCAGCAAAGATGACGTTCATGCCGTGC < 1:4638967/35‑1 CCTGCCGTTCAGCAAAGATGACGTTCATGCCGTGC < 1:20449305/35‑1 CACGCACCAAAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3615490‑3615477 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGCCGTTCAGCAAAGATGACGTTCATGCCGTGC < REL606/3947083‑3947050 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |