New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 422590 = | 83 (0.810) | 4 (0.040) | 4/46 | NT | 6.1% | intergenic (‑277/+185) | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
? | REL606 | 801538 = | 45 (0.440) | coding (346/1290 nt) | bioA | adenosylmethionine‑8‑amino‑7‑oxononanoate transaminase |
CAGTACTGCAACGCCATTTTCATCGCCACTTCCACCGCTACGGAACCGGAGTCCGCGAGAAAAACGCAC > REL606/801504‑801572 | cAGTACTGCAACGCCATTTTCATCGCCACTTCCAc > 1:15654729/1‑35 (MQ=255) cAGTACTGCAACGCCATTTTCATCGCCACTTCCAc > 1:6928569/1‑35 (MQ=255) cAGTACTGCAACGCCATTTTCATCGCCACTTCCAc > 1:10523084/1‑35 (MQ=255) cAGTACTGCAACGCCATTTTCATCGCCACTTCCAc > 1:10616790/1‑35 (MQ=255) cAGTACTGCAACGCCATTTTCATCGCCACTTCCAc > 1:11369716/1‑35 (MQ=255) cAGTACTGCAACGCCATTTTCATCGCCACTTCCAc > 1:3620892/1‑35 (MQ=255) aGTACTGCAACGCCATTTTCATCGCCACTTCCAcc > 1:13738452/1‑35 (MQ=255) aGTACTGCAACGCCATTTTCATCGCCACTTCCAcc > 1:10160225/1‑35 (MQ=255) aGTACTGCAACGCCATTTTCATCGCCACTTCCAcc > 1:2667916/1‑35 (MQ=255) aGTACTGCAACGCCATTTTCATCGCCACTTCCAcc > 1:10597563/1‑35 (MQ=255) aGTACTGCAACGCCATTTTCATCGCCACTTCCAcc > 1:6163327/1‑35 (MQ=255) aGTACTGCAACGCCATTTTCATCGCCACTTCCAcc > 1:11016247/1‑35 (MQ=255) gTACTGCAACGCCATTTTCATCGCCACTTCCACCg > 1:18745468/1‑35 (MQ=255) gTACTGCAACGCCATTTTCATCGCCACTTCCACCg > 1:3673131/1‑35 (MQ=255) gTACTGCAACGCCATTTTCATCGCCACTTCCACCg > 1:9903144/1‑35 (MQ=255) tACTGCAACGCCATTTTCATCGCCACTTCCACCGc > 1:15085260/1‑35 (MQ=255) aCTGCAACGCCATTTTCATCGCCACTTCCACCGCt > 1:2181435/1‑35 (MQ=255) aCTGCAACGCCATTTTCATCGCCACTTCCACCGCt > 1:19574749/1‑35 (MQ=255) cTGCAACGCCATTTTCATCGCCACTTCCACCGCTa > 1:5402326/1‑35 (MQ=255) cTGCAACGCCATTTTCATCGCCACTTCCACCGCTa > 1:8791037/1‑35 (MQ=255) cTGCAACGCCATTTTCATCGCCACTTCCACCGCTa > 1:19492587/1‑35 (MQ=255) cTGCAACGCCATTTTCATCGCCACTTCCACCGCTa > 1:9867777/1‑35 (MQ=255) cTGCAACGCCATTTTCATCGCCACTTCCACCGCTa > 1:1761402/1‑35 (MQ=255) tGCAACGCCATTTTCATCGCCACTTCCACCGCTAc > 1:6650289/1‑35 (MQ=255) gCAACGCCATTTTCATCGCCACTTCCACCGCTACg > 1:6109112/1‑35 (MQ=255) gCAACGCCATTTTCATCGCCACTTCCACCGCTACg > 1:16657696/1‑35 (MQ=255) gCAACGCCATTTTCATCGCCACTTCCACCGCTACg > 1:1643837/1‑35 (MQ=255) cAACGCCATTTTCATCGCCACTTCCACCGCTACgg > 1:999373/1‑35 (MQ=255) cAACGCCATTTTCATCGCCACTTCCACCGCTACga > 1:3543992/1‑34 (MQ=255) aaCGCCATTTTCATCGCCACTTCCACCGCTACGGa > 1:10258807/1‑35 (MQ=255) aaCGCCATTTTCATCGCCACTTCCACCGCTACGGa > 1:12684177/1‑35 (MQ=255) aCGCCATTTTCATCGCCACTTCCACCGCTACGGaa > 1:10228309/1‑35 (MQ=255) aCGCCATTTTCATCGCCACTTCCACCGCTACGGaa > 1:4309888/1‑35 (MQ=255) ccATTTTCATCGCCACTTCCACCGCTACGGAACCg > 1:1225903/1‑35 (MQ=255) cATTTTCATCGCCGCTTCCACCGCTACGGAACCgg > 1:9768318/1‑35 (MQ=255) cATTTTCATCGCCACTTCCACCGCTACGGAACCgg > 1:760124/1‑35 (MQ=255) cATTTTCATCGCCACTTCCACCGCTACGGAACCgg > 1:11321575/1‑35 (MQ=255) aTTTTCATCGCCACTTCCACCGCTACGGAACCGGa > 1:10075031/1‑35 (MQ=255) aTTTTCATCGCCACTTCCACCGCTACGGAACCGGa > 1:10496130/1‑35 (MQ=255) aTTTTCATCGCCACTTCCACCGCTACGGAACCGGa > 1:12768571/1‑35 (MQ=255) aTTTTCATCGCCACTTCCACCGCTACGGAACCGGa > 1:4199063/1‑35 (MQ=255) ttttCATCGCCACTTCCACCGCTACGGAACCGGAg > 1:13665665/1‑35 (MQ=255) ttttccccccctccccCCGCTACGGAACCGGAGTc < 1:6554989‑M2/19‑1 (MQ=255) tCATCGCCACTTCCACCGCTACGGAACCGGAGTcc > 1:11210773/1‑35 (MQ=255) tCATCGCCACTTCCACCGCTACGGAACCGGAGTcc > 1:13706294/1‑35 (MQ=255) ttccccccctccccCCGCTACGGAACCGGAGTCcg < 1:9579743‑M2/21‑1 (MQ=255) cATCGCCACTTCCACCGCTACGGAACCTGAGTCcg > 1:2502301/1‑35 (MQ=255) cATCGCCACTTCCACCGCTACGGAACCGGAGTCcg > 1:4231198/1‑35 (MQ=255) tccGCCCCTCCCCCCGCTACGGAACCGGAGTCcgc < 1:20509822/33‑1 (MQ=21) aTCGCCACTTCCACCGCTACGGAACCTGAGTCcgc > 1:9124052/1‑35 (MQ=255) tCGCCACTTCCACCGCTACGGAACCGGAGTCcgcg > 1:10872373/1‑35 (MQ=255) cccccACTTCCACCGCTACGGAACCGGAGTCcgcg < 1:16199389/32‑1 (MQ=255) cGCCCCTCCCCCCGCTACGGAACCGGAGTCCGCga < 1:10907691/35‑1 (MQ=25) cGCCACTTCCACCGCTACGGAACCGGAGTCCGCga > 1:15208091/1‑35 (MQ=255) cGCCACTTCCACCGCTACGGAACCGGAGTCCGCga > 1:9582896/1‑35 (MQ=255) cGCCACTCCCCCCGCTACGGAACCGGAGTCCGCga < 1:5277023/35‑1 (MQ=38) gCCACTTCCACCGCTACGGAACCGGAGTCCGCgag > 1:10205284/1‑35 (MQ=255) ccccctccccCCGCTACGGAACCGGAGTCCGCgag < 1:18478999‑M2/25‑1 (MQ=255) cccctccccCCGCTACGGAACCGGAGTCCGCgaga < 1:4595455‑M2/26‑1 (MQ=255) ccACTTCCACCGCTACGGAACCGGAGTCCGCgaga > 1:9288877/1‑35 (MQ=255) ccACTTCCACCGCTACGGAACCGGAGTCCGCgaga > 1:8523982/1‑35 (MQ=255) ccACTTCCACCGCTACGGAACCGGAGTCCGCgaga > 1:15559060/1‑35 (MQ=255) cACTTCCACCGCTACGGAACCGGAGTCCGCGAGaa > 1:14652567/1‑35 (MQ=255) cACTTCCACCGCTACGGAACCGGAGTCCGCGAGaa > 1:26719/1‑35 (MQ=255) cccccccCCGCTACGGAACCGGAGTCCGCGAGaaa < 1:12677019‑M2/28‑1 (MQ=255) aCTTCCACCGCTACGGAACCGGAGTCCGCGAGaaa > 1:11970712/1‑35 (MQ=255) cTTCCACCGCTACGGAACCGGAGTCCGCGAGaaaa > 1:14634531/1‑35 (MQ=255) cTTCCACCGCTACGGAACCGGAGTCCGCGAGaaaa > 1:19382225/1‑35 (MQ=255) ttcccCCGCTACGGAACCGGAGTCCGCGAGaaaaa < 1:3609099‑M2/30‑1 (MQ=255) ttCCACCGCTACGGAACCGGAGTCCGCGAGaaaaa > 1:17589259/1‑35 (MQ=255) ttCCACCGCTACGGAACCGGAGTCCGCGAGaaaaa > 1:11287659/1‑35 (MQ=255) tCCACCGCTACGGAACCGGAGTCCGCGAGAAAAAc > 1:6349808/1‑35 (MQ=255) ctccCCGCTACGGAACCGGAGTCCGCGAGAAAAAc < 1:1149238‑M2/31‑1 (MQ=255) ccccCCGCTACGGAACCGGAGTCCGCGAGAAAAAc < 1:17464988‑M2/31‑1 (MQ=255) ccccCCGCTACGGAACCGGAGTCCGCGAGAAAAAc < 1:12184170‑M2/31‑1 (MQ=255) ccccCCGCTACGGAACCGGAGTCCGCGAGAAAAAc < 1:18608617‑M2/31‑1 (MQ=255) ccccCCGCTACGGAACCGGAGTCCGCGAGAAAAAc < 1:6911348‑M2/31‑1 (MQ=255) cccACCGCTACGGAACCGGAGTCCGCGAGAAAAAc < 1:11222942/34‑1 (MQ=255) ccacCCGCTACGGAACCGGAGTCCGCGAGAAAAAc < 1:12872165‑M2/31‑1 (MQ=255) ccCCGCTACGGAACCGGAGTCCGCGAGAAAAACGc < 1:6223005‑M2/33‑1 (MQ=255) cACCGCTACGGAACCGGAGTCCGCGAGAAAAACGc > 1:7234574/1‑35 (MQ=255) cACCGCTACGGAACCGGAGTCCGCGAGAAAAACGc > 1:9699965/1‑35 (MQ=255) cACCGCTACGGAACCGGAGTCCGCGAGAAAAACGc > 1:18895556/1‑35 (MQ=255) cCCGCTACGGAACCGGAGTCCGCGAGAAAAACGCa < 1:18668188‑M2/34‑1 (MQ=255) aCCGCTACGGAACCGGAGTCCGCGAGAAAAACGCa > 1:5799777/1‑35 (MQ=255) aCCGCTACGGAACCGGAGTCCGCGAGAAAAACGCa < 1:5723228/35‑1 (MQ=255) ccGCTACGTAACCGGAGTCCGCTAGAAAAACGCAc > 1:18784488/1‑35 (MQ=38) ccGCTACGGAACCGGAGTCCGCGAGAAAAACGCAc < 1:6431789/35‑1 (MQ=255) ccGCTACGGAACCGGAGTCCGCGAGAAAAACGCAc > 1:12680897/1‑35 (MQ=255) ccGCTACGGAACCGGAGTCCGCGAGAAAAACGCAc > 1:17617290/1‑35 (MQ=255) | CAGTACTGCAACGCCATTTTCATCGCCACTTCCACCGCTACGGAACCGGAGTCCGCGAGAAAAACGCAC > REL606/801504‑801572 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |