New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2750665 = | 112 (1.090) | 16 (0.250) | 4/30 | NT | 22.7% | coding (1468/2079 nt) | fhlA | DNA‑binding transcriptional activator |
? | REL606 | 3792209 = | 39 (0.610) | coding (315/414 nt) | ECB_03532 | hypothetical protein |
Only 100 of 141 total aligned reads displayed.
GTTCAAACTCCTGTTCCTGCAATACACGCAGCAACTTCGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2750707‑2750665 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcggctgGGTGGGGGAAATCGATCCATATGGTTAT > REL606/3792209‑3792236 GTTCAAACTCCTGTTCCTGCAATACACGCAGCAAC > 1:9876853/1‑35 GTTCAAACTCCTGTTCCTGCAATACACGCAGCAAC > 1:14358186/1‑35 GTTCAAACTCCTGTTCCTGCAATACACGCAGCAAC > 1:7931269/1‑35 GTTCAAACTCCTGTTCCTGCAATACACGCAGCAAC > 1:19952539/1‑35 GTTCAAACTCCTGTTCCTGCAATACACGCAGCAAC > 1:19976064/1‑35 GTTCAAACTCCTGTTCCTGCAATACACGCAGCAAC > 1:4518535/1‑35 GTTCAAACTCCTGTTCCTGCAATACACGCAGCAAC > 1:12360750/1‑35 GTTCAAACTCCTGTTCCTGCAATACACGCAGCAAC < 1:4276115/35‑1 GTTCAAACTCCTGTTCCTGCAATACACGCAGCAAC < 1:2704033/35‑1 TTCAAACTCCTGTTCCTGCAATACACGCAGCAACT > 1:6661819/1‑35 TTCAAACTCCTGTTCCTGCAATACACGCAGCAACT > 1:6103522/1‑35 TTCAAACTCCTGTTCCTGCAATACACGCAGCAACT > 1:18102224/1‑35 TTCAAACTCCTGTTCCTGCAATACACGCAGCAACT > 1:8580495/1‑35 TTCAAACTCCTGTTCCTGCAATACACGCAGCAACT > 1:4006103/1‑35 TTCAAACTCCTGTTCCTGCAATACACGCAGCAACT > 1:2853155/1‑35 TTCAAACTCCTGTTCCTGCAATACACGCAGCAACT > 1:10888129/1‑35 TTCAAACTCCTGTTCCTGCAATACACGCAGCAACT < 1:972062/35‑1 TCAAACTCCTGTTCCTGCAATACACGCAGCAACTT < 1:15451130/35‑1 TCAAACTCCTGTTCCTGCAATACACGCAGCAACTT > 1:10062909/1‑35 TCAAACTCCTGTTCCTGCAATACACGCAGCAACTT > 1:13992208/1‑35 TCAAACTCCTGTTCCTGCAATACACGCAGCAACTT > 1:8013877/1‑35 TCAAACTCCTGTTCCTGCAATACACGCAGCAACTT > 1:10815644/1‑35 TCAAACTCCTGTTCCTGCAATACACGCAGCAACTT > 1:2779831/1‑35 TCAAACTCCTGTTCCTGCAATACACGCAGCAACTT > 1:12284431/1‑35 TCAAACTCCTGTTCCTGCAATACACGCAGCAACTT > 1:11817714/1‑35 CAAACTCCTGTTCCTGCAATACACGCAGCAACTTC > 1:499501/1‑35 CAAACTCCTGTTCCTGCAATACACGCAGCAACTTC < 1:13608423/35‑1 CAAACTCCTGTTCCTGCAATACACGCAGCAACTTC < 1:10797440/35‑1 CAAACTCCTGTTCCTGCAATACACGCAGCAACTTC < 1:13131063/35‑1 CAAACTCCTGTTCCTGCAATACACGCAGCAACTTC > 1:10656626/1‑35 CAAACTCCTGTTCCTGCAATACACGCAGCAACTTC > 1:19258515/1‑35 CAAACTCCTGTTCCTGCAATACACGCAGCAACTTC < 1:15098202/35‑1 CAAACTCCTGTTCCTGCAATACACGCAGCAACTTC > 1:15635260/1‑35 AAACTCCTGTTCCTTCAATACACGCAGCAACTTCG > 1:4228700/1‑35 AAACTCCTGTTCCTGCAATACACGCAGCAACTTCG > 1:8527836/1‑35 AAACTCCTGTTCCTGCAATACACGCAGCAACTTCG > 1:5192397/1‑35 AAACTCCTGTTCCTGCAATACACGCAGCAACTTCG < 1:18866550/35‑1 AAACTCCTGTTCCTGCAATACACGCAGCAACTTCG < 1:14856463/35‑1 AAACTCCTGTTCCTGCAATACACGCAGCAACTTCG > 1:17240007/1‑35 AAACTCCTGTTCCTGCAATACACGCAGCAACTTCG > 1:16665397/1‑35 AAACTCCTGTTCCTGCAATACACGCAGCAACTTCG > 1:16276594/1‑35 AAACTCCTGTTCCTGCAATACACGCAGCAACTTCG > 1:15414437/1‑35 AAACTCCTGTTCCTGCAATACACCCAGCAACTTCG > 1:15186430/1‑35 AAACTCCTGTTACTGCAATACACGCAGCAACTTCG < 1:11634818/35‑1 AACTCCTGTTCCTGCAATACACGCAGCAACTTCGG < 1:17445409/35‑1 AACTCCTGTTCCTGCAATACACGCAGCAACTTCGG > 1:6079342/1‑35 AACTCCTGTTCCTGCAATACACGCAGCAACTTCGG < 1:6015304/35‑1 AACTCCTGTTCCTGCAATACACGCAGCAACTTCGG > 1:3095887/1‑35 AACTCCTGTTCCTGCAATACACGCAGCAACTTCGG > 1:8660839/1‑35 AACTCCTGTTCCTGCAATACACGCAGCAACTTCGG < 1:12240190/35‑1 AACTCCTGTTCCTGCAATACACGCAGCAACTTCGG < 1:12457164/35‑1 AACTCCTGTTCCTGCAATACACGCAGCAACTTAGG < 1:3675672/35‑1 ACTCCTGTTCCTGCAATACACGCAGCAACTTCGGC < 1:9915759/35‑1 ACTCCTGTTCCTGCAATACACGCAGCAACTTCGGC < 1:10056374/35‑1 ACTCCTGTTCCTGCAATACACGCAGCAACTTCGGC > 1:347642/1‑35 ACTCCTGTTCCTGCAATACACGCAGCAACTTCGGC > 1:8675222/1‑35 ACTCCTGTTCCTGCAATACACGCAGCAACTTCGGC < 1:20451802/35‑1 ACTCCTGTTCCTGCAATACACGCAGCAACTTCGGC < 1:20144766/35‑1 ACTCCTGTTCCTGCAATACACGCAGCAACTTCGGC > 1:19685068/1‑35 ACTCCTGTTCCTGCAATACACGCAGCAACTTCGGC > 1:7856720/1‑35 CTCCTGTTCCTGCAATACACGCAGCAACTTCGGCT > 1:3437497/1‑35 cCCTGTCCCTGCAATACACGCAGCAACTTCGGCTG < 1:629100/34‑1 TCCTGTTCCTGCAATACACGCAGCAACTTCGGCTG > 1:4683487/1‑35 TCCTGTTCCTGCAATACACGCAGCAACTTCGGCTG < 1:4249737/35‑1 TCCTGTTCCTGCAATACACGCAGCAACTTCGGCTG < 1:15827653/35‑1 TCCTGTTCCTGCAATACACGCAGCAACTTCGGCTG > 1:3653715/1‑35 TCCTGTTCCTGCAATACACGCAGCAACTTCGGCTG > 1:14862602/1‑35 CCTGTTCCTGCAATACACGCAGCAACTTCGGCTGG > 1:2850767/1‑35 CCTGTTCCTGCAATACACGCAGCAACTTCGGCTGG > 1:16245809/1‑35 CTGTTCCTGCAATACACGCAGCAACTTCGGCTttt > 1:8262032/1‑32 CTGTTCCTGCAATACACGCAGCAACTTCGGCTGGG > 1:12678453/1‑35 TGTTCCTGCAATACACGCAGCAACTTCGGCTGGGg > 1:10015394/1‑34 TGTTCCTGCAATACACGCAGCAACTTCGGCTGGGg > 1:13227504/1‑34 TGTTCCTGCAATACACGCAGCAACTTCGGCTGGGg > 1:18518801/1‑34 GTTCCTGCAATACACGCAGCAACTTCGGCTGGGgg > 1:9537169/1‑33 GTTCCTGCAATACACGCAGCAACTTCGGCTGGGgg > 1:16889909/1‑33 GTTCCTGCAATACACGCAGCAACTTCGGCTGGGgg > 1:5513499/1‑33 GTTCCTGCAATACACGCAGCAACTTCGGCTGGGgg > 1:4080564/1‑33 GTTCCTGCAATACACGCAGCAACTTCGGCTGGGgg > 1:19564377/1‑33 GTTCCTGCAATACACGCAGCAACTTCGGCTGGGgg > 1:20240763/1‑33 GTTCCTGCAATACACGCAGCAACTTCGGCTGGGgg > 1:2466318/1‑33 GTTCCTGCAATACACGCAGCAACTTCGGCTGGGac > 1:14853295/1‑33 TTCCTGCAATACACGCAGCAACTTCGGCTGGGGGG > 1:16037633/1‑35 TTCCTGCAATACACGCAGCAACTTCGGCTGGGGGG > 1:2765371/1‑35 TTCCTGCAATACACGCAGCAACTTCGGCTGGGGGG > 1:11644745/1‑35 TTCCTGCAATACACGCAGCAACTTCGGCTGGGGGG > 1:10455857/1‑35 TCCTGCAATACACGCAGCAACTTCGGCTGGGGGGG > 1:1839989/1‑35 TCCTGCAATACACGCAGCAACTTCGGCTGGGGGGG > 1:10416438/1‑35 CCTGCAATACACGCAGCAACTTCGGCTGGGGGGGc > 1:6666308/1‑34 CCTGCAATACACGCAGCAACTTCGGCTGGGGGGGG > 1:7629614/1‑35 CCTGCAATACACGCAGCAACTTCGGCTGGGGGGGG > 1:13763667/1‑35 CTGCAATACACGCAGCAACTTCGGCTGGGGGGGGG > 1:15418527/1‑35 CTGCAATACACGCAGCAACTTCGGCTGGGGGGGGG > 1:7583785/1‑35 CTGCAATACACGCAGCAACTTCGGCTGGGGGGGGG > 1:340565/1‑35 TGCAATACACGCAGCAACTTCGGCTGGGGGGGGGg > 1:6476069/1‑34 TGCAATACACGCAGCAACTTCGGCTGGGGGGGGGg > 1:14210332/1‑34 TGCAATACACGCAGCAACTTCGGCTGGGGGGGGGg > 1:13096465/1‑34 TGCAATACACGCAGCAACTTCGGCTGGGGGGGGGg > 1:11034453/1‑34 CTTCGGCTGGGTGGGGGAAATCGATCCATATGGTT < 1:13310591/35‑1 TCGGCTGGGTGGGGGAAATCGATCCATATGGTTAT < 1:19013258/35‑1 GTTCAAACTCCTGTTCCTGCAATACACGCAGCAACTTCGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2750707‑2750665 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcggctgGGTGGGGGAAATCGATCCATATGGTTAT > REL606/3792209‑3792236 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |