Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 3,517,306 IS186 (+) +8 bp :: Δ2 56.2% coding (187‑194/1743 nt) ggt ← gamma‑glutamyltranspeptidase periplasmic precursor

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 590715 =NA (NA)34 (0.380) 22/42 NT 41.2% noncoding (1/1343 nt) IS186 repeat region
?REL606 = 3517313 30 (0.540)coding (187/1743 nt) ggt gamma‑glutamyltranspeptidase periplasmic precursor
* ? REL606 = 2774194NA (NA)52 (0.530) 28/46 NT 47.8% noncoding (1341/1343 nt) IS186 repeat region
?REL606 3517306 = 37 (0.580)coding (194/1743 nt) ggt gamma‑glutamyltranspeptidase periplasmic precursor

Only 100 of 158 total aligned reads displayed.

GAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTA  >  REL606/590681‑590747
                                  |                                
 aaCCGAAGAAGTAGCCGTTGTGCGGGGAGTAATcc                                 <  1:8934658/35‑1 (MQ=255)
 aaCCGAAGAAGTAGCCGTTGTGCGGGGAGTAATcc                                 <  1:7604507/35‑1 (MQ=255)
  cccGAAGATTTAGCCGTTGTGCGGGGAGTAATccc                                <  1:17607158/34‑1 (MQ=37)
  cccGAAGAAGTAGCCGTTGTGCGGGGAGTAATccc                                <  1:14318719/34‑1 (MQ=255)
  cccGAAGAAGTAGCCGTTGTGCGGGGAGTAATccc                                <  1:13290446/34‑1 (MQ=255)
  aCCGAAGAAGTAGCCGTTGTGCGGGGAGTAATccc                                <  1:6344352/35‑1 (MQ=255)
   ccGAAGAGGTAGCCGTTGTGCGGGGAGTAATCCCa                               <  1:4600514/35‑1 (MQ=255)
   ccGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCa                               <  1:19705740/35‑1 (MQ=255)
   ccGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCa                               <  1:14660104/35‑1 (MQ=255)
    ggaaggaGTAGCCGTTGTGCGGGGAGTAATCCCAt                              <  1:2362806/34‑1 (MQ=255)
    cGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCAt                              <  1:7881644/35‑1 (MQ=255)
     gaagaaTTAGCCGTTGTGCGGGGAGTAATCCCATa                             <  1:9389180/35‑1 (MQ=255)
       agaatTAGCCGTTGTGCGGGGAGTAATCCCATAAg                           <  1:19467395/35‑1 (MQ=255)
        gaatTAGCCGTTGTGCGGGGAGTAATCCCATAAgc                          <  1:10597446/35‑1 (MQ=255)
        gaagTAGCCGTTGTGCGGGGAGTAATCCCATAAgc                          <  1:10916700/35‑1 (MQ=255)
        gaagTAGCCGTTGTGCGGGGAGTAATCCCATAAgc                          <  1:10821778/35‑1 (MQ=255)
        gaagTAGCCGTTGTGCGGGGAGTAATCCCATAAgc                          <  1:13937378/35‑1 (MQ=255)
        gaagTAGCCGTTGTGCGGGGAGTAATCCCATAAgc                          <  1:19237940/35‑1 (MQ=255)
        gaagTAGCCGTTGTGCGGGGAGTAATCACATAAgc                          <  1:8178220/35‑1 (MQ=255)
         aagTAGCCGTTGTGCGGGGAGTAATCCCATAAgcg                         <  1:14230449/35‑1 (MQ=255)
         aagTAGCCGTTGTGCGGGGAGTAATCCCATAAgcg                         <  1:14150887/35‑1 (MQ=255)
         aagTAGCCGTTGTGCGGGGAGTAATCCCATAAgcg                         <  1:18854315/35‑1 (MQ=255)
          agTAGCCGTTGTGCGGGGAGTAATCCCATAAgcgc                        <  1:9306163/35‑1 (MQ=255)
           gTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCt                       <  1:6642394/35‑1 (MQ=255)
           gTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCt                       <  1:227920/35‑1 (MQ=255)
           gTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCt                       <  1:16197129/35‑1 (MQ=255)
            tAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTa                      <  1:7428290/35‑1 (MQ=255)
            tAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTa                      <  1:11307943/35‑1 (MQ=255)
             aGCCGTTGTGCGGGGAGTAATCCCATAAGGGCTaa                     <  1:15616573/35‑1 (MQ=255)
             aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa                     <  1:16443514/35‑1 (MQ=255)
             aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa                     >  1:18166638/1‑35 (MQ=255)
             aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa                     <  1:14549812/35‑1 (MQ=255)
             aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa                     <  1:11800041/35‑1 (MQ=255)
             aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa                     <  1:7735876/35‑1 (MQ=255)
              gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAAc                    >  1:20088663/1‑35 (MQ=255)
              gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAAc                    <  1:2354734/35‑1 (MQ=255)
              gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAAc                    <  1:43495/35‑1 (MQ=255)
              gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAAc                    <  1:5875237/35‑1 (MQ=255)
              gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAAc                    <  1:10133799/35‑1 (MQ=255)
               ccGTTGTGCGGGGAGTAATCCCATAAGCGCTAACt                   <  1:11043717/35‑1 (MQ=255)
               ccGTTGTGCGGGGAGTAATCCCATAAGCGCTAACt                   >  1:16044511/1‑35 (MQ=255)
               ccGTTGTGCGGGGAGTAATCCCATAAGCGCTAACt                   <  1:7515107/35‑1 (MQ=255)
                cGTTGTGCGGGGAGTAATCCCATAAGAGCTAACtt                  <  1:10677184/35‑1 (MQ=255)
                cGTCGTGCGGGGAGTAATCCCATAAGCGCTAACtt                  <  1:11779728/35‑1 (MQ=255)
                 gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa                 >  1:3997342/1‑35 (MQ=255)
                 gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa                 >  1:4463488/1‑35 (MQ=255)
                 gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa                 <  1:13803757/35‑1 (MQ=255)
                 gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa                 >  1:1213921/1‑35 (MQ=255)
                 gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa                 >  1:19395925/1‑35 (MQ=255)
                 gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa                 <  1:8878929/35‑1 (MQ=255)
                 gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa                 >  1:10403563/1‑35 (MQ=255)
                 gTTGTGCGGGGAGTAATACCATAAGCGCTAACTTa                 <  1:5482744/35‑1 (MQ=255)
                 agggtgGGGGGAGATCTCCCATAAGCGCTAACTTa                 >  1:13218243/4‑35 (MQ=0)
                  ttGTGCGGGGAGTAATCCCATAAGCGCTAACTTaa                <  1:15899830/35‑1 (MQ=255)
                   tgtgCGGGGAGTAATCCCATAAGCGCTAACTTAAg               <  1:1193609/35‑1 (MQ=255)
                   tgtgCGGGGAGTAATCCCATAAGCGCTAACTTAAg               <  1:11559997/35‑1 (MQ=255)
                   tgtgCGGGGAGTAATCCCATAAGCGCTAACTTAAg               <  1:4911245/35‑1 (MQ=255)
                   tgtgCGGGGAGTAATCCCATAAGCGCTAACTTAAg               <  1:2211165/35‑1 (MQ=255)
                   tgtgCGGGGAGTAATCCCATAAGCGCTAACTTAAg               >  1:15493921/1‑35 (MQ=255)
                   tgtgCGGGGAGTAATCCCATAAGCGCTAACTAAAg               >  1:13846380/1‑35 (MQ=255)
                    gtgCGGGGAGTAATCCCATAAGCGCTAACTTAAgg              <  1:6249225/35‑1 (MQ=255)
                    gtgCGGGGAGTAATCCCATAAGCGCTAACTTAAgg              <  1:9793717/35‑1 (MQ=255)
                    gtgCGGGGAGTAATCCCATAAGCGCTAACTTAAgg              <  1:2398146/35‑1 (MQ=255)
                    gtgCGGGGAGTAATCCCATAAGCGCTAACTTAAgg              <  1:19847188/35‑1 (MQ=255)
                    gtgCGGGGAGTAATCCCATAAGCGCTAACTTAAgg              >  1:20442289/1‑35 (MQ=255)
                     tgCGGGGAGTAATCCCATAAGCGCTAACTTAAggg             <  1:905087/35‑1 (MQ=40)
                     tgCGGGGAGTAATCCCATAAGCGCTAACTTAAggg             >  1:20614089/1‑35 (MQ=40)
                       cGGGGAGTAATCCCATAAGCGCTAACTTAAGGGtt           >  1:17506025/1‑35 (MQ=38)
                        ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg          >  1:18956244/1‑35 (MQ=38)
                        ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg          >  1:885732/1‑35 (MQ=38)
                        ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg          <  1:5541995/35‑1 (MQ=38)
                        ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg          >  1:1837989/1‑35 (MQ=38)
                        ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg          >  1:9363492/1‑35 (MQ=38)
                        ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg          >  1:4249438/1‑35 (MQ=38)
                        ggggAGTAATCCCATAAGCGCTAACTTAAGGGTtg          <  1:1795180/35‑1 (MQ=38)
                         gggAGTAATCCCATAAGCGCTAACTTAAGGGTtgt         <  1:15850741/35‑1 (MQ=40)
                         gggAGTAATCCCATAAGCGCTAACTTAAGGGTtgt         <  1:18142027/35‑1 (MQ=40)
                          ggAGTAATCCCATAAGCGCTAACTTAAGGGTtgtg        <  1:7017107/35‑1 (MQ=255)
                          ggAGTAATCCCATAAGCGCTAACTTAAGGGTtgtg        <  1:17061073/35‑1 (MQ=255)
                          ggAGTAATCCCATAAGCGCTAACTTAAGGGTtgtg        >  1:541434/1‑35 (MQ=255)
                           gAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg       <  1:18831386/35‑1 (MQ=255)
                           gAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg       >  1:7099851/1‑35 (MQ=255)
                           gAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg       >  1:5141706/1‑35 (MQ=255)
                           gAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg       >  1:20595400/1‑35 (MQ=255)
                           gAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg       <  1:12946392/35‑1 (MQ=255)
                            aGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGt      <  1:5734424/35‑1 (MQ=255)
                            aGTAATCCCATAAGCGCTAACTTAAGGATTGTGGt      <  1:2634175/35‑1 (MQ=255)
                             gTAATCCCATAAGTGCTAACTTAAGGGTTGTGGTa     <  1:14081425/35‑1 (MQ=255)
                             gTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTa     <  1:8421614/35‑1 (MQ=40)
                             gTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTa     >  1:3551125/1‑35 (MQ=40)
                              tAATCCCATAAGCGCTAACTTAAGGGTTGTGGTAt    >  1:6840818/1‑35 (MQ=38)
                              tAATCCCATAAGCGCTAACTTAAGGGTTGTGGTAt    <  1:19413806/35‑1 (MQ=38)
                              tAATCCCATAAGCGCTAACTTAAGGGTTGTGATAt    <  1:16789447/35‑1 (MQ=255)
                               aaTCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt   >  1:7673420/1‑35 (MQ=35)
                               aaTCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt   <  1:924807/35‑1 (MQ=35)
                               aaTCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt   <  1:9465120/35‑1 (MQ=35)
                               aaTCCCATAAGCGCTAACTTAAGGGTTGTGGCAtt   <  1:14969160/35‑1 (MQ=255)
                               aaTCCCATAAGCGCTAACTTAAGGGTGGTGGTAtt   <  1:18368822/35‑1 (MQ=255)
                                aTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa  <  1:19795024/35‑1 (MQ=32)
                                aTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa  >  1:19344593/1‑35 (MQ=32)
                                  |                                
GAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTA  >  REL606/590681‑590747

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.