Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 1,776,434 | IS150 (–) +4 bp | 56.9% | intergenic (‑225/+56) | pheS ← / ← pheM | phenylalanyl‑tRNA synthetase alpha subunit/phenylalanyl‑tRNA synthetase operon leader peptide |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1776434 = | 33 (0.390) | 48 (0.470) | 28/48 | NT | 54.8% | intergenic (‑225/+59) | pheS/pheM | phenylalanyl‑tRNA synthetase alpha subunit/phenylalanyl‑tRNA synthetase operon leader peptide |
? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 1776437 | 33 (0.390) | 39 (0.380) | 21/48 | NT | 49.6% | intergenic (‑228/+56) | pheS/pheM | phenylalanyl‑tRNA synthetase alpha subunit/phenylalanyl‑tRNA synthetase operon leader peptide |
? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 169 total aligned reads displayed.
TATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTTCTC > REL606/1776400‑1776468 | catttgatcgtccaacaaaatgggtgcagtacaAc > 1:15488037‑M1/34‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaAc > 1:2241857‑M1/34‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaAc < 1:8270235‑M1/2‑1 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaAc > 1:145136‑M1/34‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaAc > 1:14793235‑M1/34‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaAc < 1:978435‑M1/2‑1 (MQ=255) aTTTTTCAAAACGCGCATACAAAAAAAGCCTCCAc > 1:8914739/1‑35 (MQ=255) aTTTTTCAAAACGCGCATACAAAAAAAGCCTCCAc > 1:11583244/1‑35 (MQ=255) aTTTTTCAAAACGCGCATACAAAAAAAGCCTCCAc > 1:5359453/1‑35 (MQ=255) tttttCAAAACGCGCATACAAAAAAAGCCTCCACt > 1:3912079/1‑35 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaACt < 1:1428854‑M1/3‑1 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaACt > 1:9566091‑M1/33‑35 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaACt > 1:20425139‑M1/33‑35 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaACt > 1:6087214‑M1/33‑35 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaACt > 1:13334248‑M1/33‑35 (MQ=255) ttttCAAAACGCGCATACAAAAAAAGCCTCCACTg > 1:15794263/1‑35 (MQ=255) tttCAAAACGCGCATACAAAAAAAGCCTCCACTgg > 1:759172/1‑35 (MQ=255) ttCAAAACGCGCATACAAAAAAAGCCTCCACTGtg > 1:4959412‑M1/1‑33 (MQ=255) catcgtccaacaaaatgggtgcagtacaACTGGGa < 1:15477130‑M1/7‑1 (MQ=255) catcgtccaacaaaatgggtgcagtacaACTGGGa > 1:8575115‑M1/29‑35 (MQ=255) tcgtccaacaaaatgggtgcagtacaACTGGGAgg < 1:3966370‑M1/9‑1 (MQ=255) tcgtccaacaaaatgggtgcagtacaACTGGGAgg < 1:9345312‑M1/9‑1 (MQ=255) aaaaCGCGCATACAAAAAAAGCCTCCACTGtgtac > 1:16680911‑M1/1‑30 (MQ=255) aaaaCGCGCATACAAAAAAAGCCTCCACTGGGAgg > 1:6636369/1‑35 (MQ=255) cgtccaacaaaatgggtgcagtacaACTGGGAGGc < 1:15298498‑M1/10‑1 (MQ=255) cgtccaacaaaatgggtgcagtacaACTGGGAGGc < 1:19418512‑M1/10‑1 (MQ=255) cgtccaacaaaatgggtgcagtacaACTGGGAGGc < 1:10999161‑M1/10‑1 (MQ=255) aaaCGCGCATACAAAAAAAGCCTCCACTGtgtact > 1:12805942‑M1/1‑29 (MQ=255) aaaCGCGCATACAAAAAAAGCCTCCACTGtgtact > 1:8988467‑M1/1‑29 (MQ=255) gtccaacaaaatgggtgcagtacaACTGGGAGGCt > 1:11854333‑M1/25‑35 (MQ=255) aaCGCGCATAAAAAAAAAGCCTCCACTGGGAGGCt < 1:19148808/35‑1 (MQ=255) aaCGCGCATAAAAAAAAAGCCTCCACTGGGAGGCt < 1:1796030/35‑1 (MQ=255) tccaacaaaatgggtgcagtacaACTGGGAGGCtt > 1:20212648‑M1/24‑35 (MQ=255) tccaacaaaatgggtgcagtacaACTGGGAGGCtt < 1:913584‑M1/12‑1 (MQ=255) tccaacaaaatgggtgcagtacaACTGGGAGGCtt > 1:3814220‑M1/24‑35 (MQ=255) aCGCGCATACAAAAAAAGCCTCCACTGtgtactga > 1:20390632‑M1/1‑27 (MQ=255) aCGCGCATACAAAAAAAGCCTCCACTGtgtactga > 1:3738545‑M1/1‑27 (MQ=255) aCGCGCATACAAAAAAAGCCTCCACTGTGAGGCtt > 1:10846752/1‑35 (MQ=255) aCGCGCATACAAAAAAAGCCTCCACTGGGAGGCtt > 1:6742500/1‑35 (MQ=255) aCGCGCATACAAAAAAAGCCTCCACTGGGAGGCtt < 1:10509108/35‑1 (MQ=255) cgcgCATACAAAAAAAGCCTCCACTGGGAGGTttt > 1:1888215/1‑35 (MQ=255) cgcgCATACAAAAAAAGCCTCCACTGGGAGGCttt > 1:10835179/1‑35 (MQ=255) gcgcATACAAAAAAAGCCTCCACTGGGATGCTTTc > 1:14562155/1‑35 (MQ=255) gcgcATACAAAAAAAGCCTCCACTGGGAGGCTTTc > 1:2115483/1‑35 (MQ=255) caacaaaatgggtgcagtacaACTGGGAGGCTTTc > 1:5409188‑M1/22‑35 (MQ=255) cgcATACAAAAAAAGCCTCCACTGtgtactgaccc > 1:19073783‑M1/1‑24 (MQ=255) cgcATAAAAAAAAAGCCTCCACTGGGAGGCTTTCa < 1:16172836/35‑1 (MQ=255) acaaaatgggtgcagtacaACTGGGAGGCTTTCAg > 1:6182024‑M1/20‑35 (MQ=255) acaaaatgggtgcagtacaACTGGGAGGCTTTCAg > 1:20185684‑M1/20‑35 (MQ=255) caaaatgggtgcagtacaACTGGGAGGCTTTCAgg < 1:16379508‑M1/17‑1 (MQ=255) cATACAAAAAAAGCCTCCACTGtgtactgacccca > 1:779258‑M1/1‑22 (MQ=255) aaaatgggtgcagtacaACTGGGAGGCTTTCAGgc < 1:12949700‑M1/18‑1 (MQ=255) aTACAAAAAAAGCCTCCACTGGGAGGCTTTCAGgc > 1:17777704/1‑35 (MQ=255) tACAAAAAAAGCCTCCACTGtgtactgactccaaa > 1:12410630‑M1/1‑20 (MQ=255) tACAAAAAAAGCCTCCACTGGGAGGCTTTCAGgcg > 1:16835135/1‑35 (MQ=255) aaatgggtgcagtacaACTGGGAGGCTTTCAGgcg > 1:468877‑M1/17‑35 (MQ=255) aaaaaaaaagcCTCCACTGtgtactgaccccaaaa < 1:10568634‑M1/33‑17 (MQ=255) cAAAAAAGGCCTCCACTGGGAGGCTTTCAGGCGCt < 1:2664069/35‑1 (MQ=255) cAAAAAAAGCCTCCACTGtgtactgaccccaaaaa > 1:5825773‑M1/1‑18 (MQ=255) cAAAAAAAGCCTCCACTGGGAGGCTTTCAGGCGCt > 1:11932957/1‑35 (MQ=255) aaaaaaaaGCCTCCACTGGGAGGCTTTCAGGCGCt < 1:16865649/34‑1 (MQ=255) tgggtgcagtacaACTGGGAGGCTTTCAGGCGCTg < 1:12710659‑M1/22‑1 (MQ=255) aaaaaaaGCCTCCACTGtgtactgaccccaaaaag > 1:8259866‑M1/1‑17 (MQ=255) aaaaaaaGCCTCCACTGGGAGGCTTTCAGGCGCTg > 1:3019978/1‑35 (MQ=255) aaaaaaGCCTCCACTGtgtactgaccccaaaaagt < 1:17336871‑M1/35‑20 (MQ=255) aaaaaaGCCTCCACTGtgtactgaccccaaaaagt > 1:14045052‑M1/1‑16 (MQ=255) aaaaaaGCCTCCACTGtgtactgaccccaaaaagt < 1:3235996‑M1/35‑20 (MQ=255) ggtgcagtacaACTGGGAGGCTTTCAGGCGctggg < 1:8014551‑M1/24‑3 (MQ=255) ggtgcagtacaACTGGGAGGCTTTCAGGCGCTGtt > 1:5921708‑M1/12‑35 (MQ=255) gtgcagtacaACTGGGAGGCTTTCAGGCgctggtt < 1:11451836‑M1/25‑4 (MQ=255) gtgcagtacaACTGGGAGGCTTTCAGGCGCTGttt > 1:10104064‑M1/11‑35 (MQ=255) aaaaGCCTCCACTGGGAGGCTTTCAGGCGCTgggt > 1:15151685/1‑32 (MQ=255) aaaaGCCTCCACTGGGAGGCTTTCAGGCGCTGgtt > 1:12052765/1‑35 (MQ=255) aaaaGCCTCCACTGGGAGGCTTTCAGGCGCTGgtt > 1:11619698/1‑35 (MQ=255) aaaaGCCTCCACTGGGAGGCTTTCAGGCGCTGgtt > 1:16247834/1‑35 (MQ=255) taaGCCTCCACTGGGAGGCTTTCAGGCGCTGtttt < 1:2669619/34‑1 (MQ=255) aaaGCCTCCACTGGGAGGCTTTCAGGCGCTGtttt < 1:15135389/35‑1 (MQ=255) gcagtacaACTGGGAGGCTTTCAGGCGCTGTTTTc > 1:20014316‑M1/9‑35 (MQ=255) aaccctccACTGtgtactgaccccaaaaagttgga < 1:5513946‑M1/32‑24 (MQ=255) aaGCCTCCACTGtgtactgaccccaaaaagttgga > 1:6397845‑M1/1‑12 (MQ=255) aaGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTc < 1:3400118/35‑1 (MQ=255) aGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTcc < 1:11190945/35‑1 (MQ=255) nnctcNNCTGtgtactgaccccaaaaagttggaca < 1:17347595‑M1/33‑26 (MQ=255) ccctCCACTGtgtactgaccccaaaaagttggaca < 1:17666143‑M1/34‑26 (MQ=255) agtacaACTGGGAGGCTTTCAGGCGCTGTTTTCCg > 1:4107304‑M1/7‑35 (MQ=255) gtacaACTGGGAGGCTTTCAGGCGCTGTTTTCCGt > 1:13886275‑M1/6‑35 (MQ=255) ccTCCACTGtgtactgaccccaaaaagttggacag < 1:13429188‑M1/35‑27 (MQ=255) ccTCCACTGtgtactgaccccaaaaagttggacag > 1:7522300‑M1/1‑9 (MQ=255) tacaACTGGGAGGCTTTCAGGCGCTGTTTTCCGtt > 1:1008219‑M1/5‑35 (MQ=255) ccccacTGtgtactgaccccaaaaagttggacagt > 1:9347595‑M1/3‑8 (MQ=255) cTCCACTGtgtactgaccccaaaaagttggacagt < 1:13475131‑M1/35‑28 (MQ=255) cTCCACTGGGATGCTTTCAGGCGCTGTGTTACgct > 1:11268854/1‑33 (MQ=21) cTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGtn < 1:16648650/35‑1 (MQ=255) tCCACTGtgtactgaccccaaaaagttggacagtt < 1:10346386‑M1/35‑29 (MQ=255) acaaCTGGGAGGCTTTCAGGCGCTGGTTTTCGttt > 1:10721552/4‑35 (MQ=25) caACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTtc > 1:7770015‑M1/3‑35 (MQ=255) aACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTtct > 1:13382987‑M1/2‑35 (MQ=255) aACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTtct > 1:3499410‑M1/2‑35 (MQ=255) aCTGGGAGGCTTTCAGGCGCTGTTTTCCGTttctc < 1:5783290/35‑1 (MQ=255) aCTGGGAGGCTTTCAGGCGCTGGTTTTCGTttttc > 1:14627776/1‑35 (MQ=25) | TATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTTCTC > REL606/1776400‑1776468 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |