New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 280732 | 59 (0.570) | 9 (0.120) | 3/36 | NT | 14.3% | coding (170/636 nt) | yagZ | hypothetical protein |
? | REL606 | 3006460 = | 64 (0.830) | coding (470/819 nt) | yafZ | conserved protein |
GCCAGGCTACCGAGTGGCGTCACAACCAGCTTACTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/280693‑280732 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggGGGTTTTTGACCGGATTGAGGAAAAGCGTGATGC > REL606/3006460‑3006493 GCCATGCTACCGAGTGGCGTCACAACCAGCTTACT > 1:18275137/1‑35 GCCAGGCTACCGAGTGGCGTCACAACCAGCTTACT > 1:20193850/1‑35 GCCAGGCTACCGAGTGGCGTCACAACCAGCTTACT < 1:4773869/35‑1 GCCAGGCTACCGAGTGGCGTCACAACCAGCTTACT < 1:2448659/35‑1 GCCAGGCTACCGAGTGGCGTCACAACCAGCTTACT > 1:1548088/1‑35 GCCAGGCTACCGAGTGGCGTCACAACCAGCTTACT < 1:5500222/35‑1 CCAGGCTACCGAGTGGCGTCACAACCAGCTTACTG > 1:4436926/1‑35 CCAGGCTACCGAGTGGCGTCACAACCAGCTTACTG < 1:4476393/35‑1 CCAGGCTACCGAGTGGCGTCACAACCAGCTTACTG > 1:18930792/1‑35 CCAGGCTACCGAGTGGCGTCACAACCAGCTTACTG > 1:5986204/1‑35 CCAGGCTACCGAGTGGCGTCACAACCAGCTTACTG < 1:14467422/35‑1 CCAGGCTACCGAGTGGCGTCACAACCAGCTTACTG > 1:1893616/1‑35 CCAGGCTACCGAGTGGCGTCACAACCAGCTTACTG < 1:13112019/35‑1 CCAGGCTACCGAGTGGCGTCACAACCAGCTTACTG < 1:2964165/35‑1 CCAGGCTACCGAGTGGCGTAACAACCAGCTTACTG < 1:8729122/35‑1 CAGGCTACCGAGTGGCGTCACAACCAGCTTACTGG < 1:14676850/35‑1 CAGGCTACCGAGTGGCGTCACAACCAGCTTACTGG > 1:14245894/1‑35 CAGGCTACCGAGTGGCGTCACAACCAGCTTACTGG > 1:11911027/1‑35 CAGGCTACCGAGTGGCGTCACAACCAGCTTACTGG > 1:10611099/1‑35 CAGGCTACCGAGTGGCGCCACAACCAGCTTACTGG > 1:19045400/1‑35 AGGCTACCGAGTGGCGTCACAACCAGCTTACTGGT > 1:5454272/1‑35 GGCTACCGAGTGGCGTCACAACCAGCTTACTGGTG < 1:17163503/35‑1 GGCTACCGAGTGGCGTCACAACCAGCTTACTGGTG < 1:20451556/35‑1 GGCTACCGAGTGGCGTCACAACCAGCTTACTGGTG < 1:4426305/35‑1 GGCTACCGAGTGGCGTCACAACCAGCTTACTGGTG < 1:7278192/35‑1 GCTACCGAGTGGCGTCACAACCAGCTTACTGGTtg > 1:6662929/1‑33 CTACCGAGTGGCGTCACAACCAGCTTACTGGTGGG > 1:343667/1‑35 CTACCGAGTGGCGTCACAACCAGCTTACTGGTGGG > 1:17894568/1‑35 CTACCGAGTGGCGTCACAACCAGCTTACTGGTGGG > 1:8935544/1‑35 ACCGAGTGGCGTCACAACCAGCTTACTGGTGGGGt > 1:16570351/1‑34 ACCGAGTGGCGTCACAACCAGCTTACTGGTGGGGG > 1:15057575/1‑35 CGAGTGGCGTCACAACCAGCTTACTGGTGGGGGgt > 1:19407746/1‑33 CGAGTGGCGTCACAACCAGCTTACTGGTGGGGGgt > 1:8499616/1‑33 CGAGTGGCGTCACAACCAGCTTACTGGTGGGGGct > 1:12445509/1‑33 CGAGTGGCGTCACAACCAGCTTACTGGTGGGGGTT > 1:2537491/1‑35 GAGTGGCGTCACAACCAGCTTACTGGTGGGGGGTT > 1:9528882/1‑35 GAGTGGCGTCACAACCAGCTTACTGGTGGGGGCTT > 1:2549850/1‑35 GAGTGGCGTCACAACCAGCTTACTGGTGGGGGCTT > 1:12730413/1‑35 GAGTGGCGTCACAACCAGCTTACTGGTGGGGGCTT > 1:15050773/1‑35 GAGTGGCGTCACAACCAGCTTACTGGTGGGGGCTT > 1:20433674/1‑35 AGTGGCGTCACAACCAGCTTACTGGTGGGGGTTTT > 1:3750931/1‑35 AGTGGCGTCACAACCAGCTTACTGGTGGGGGGTTT > 1:20023494/1‑35 GTGGCGTCACAACCAGCTTACTGGTGGGGGTTTTT > 1:8247623/1‑35 GTGGCGTCACAACCAGCTTACTGGTGGGGGCTTTT > 1:4717955/1‑35 TGGTGGGGGTTTTTGACCGGATTGAGGAAAAGCGT > 1:9402868/1‑35 TGGTGGGGGTTTTTGACCGGATTGAGGAAAAGCGT > 1:8160195/1‑35 TGGTGGGGGTTTTTGACCGGATTGAGGAAAAGCGT < 1:7710718/35‑1 TGGTGGGGGTTTTTGACCGGATTGAGGAAAAGCGT < 1:13446065/35‑1 TGGTGGGGGTTTTTGACCGGATTGAGGAAAAGCGT < 1:4614025/35‑1 GGTGGGGGTTTTTGACCTGATTGAGGAAAAGCGTG > 1:14868717/1‑35 GGTGGGGGTTTTTGACCGGATTGAGGAAAAGCGTG < 1:10863333/35‑1 GGTGGGGGTTTTTGACCGGATTGAGGAAAAGCGTG > 1:7484719/1‑35 GGTGGGGGTTTTTGACCGGATTGAGGAAAAGCGTG < 1:500340/35‑1 GTGGGGGTTTTTGACCGGATTGAGGAAAAGCGTGA < 1:10423185/35‑1 GTGGGGGTTTTTGACCGGATTGAGGAAAAGCGTGA > 1:6527427/1‑35 GTGGGGGTTTTTGACCGGATTGAGGAAAAGCGTGA < 1:19851596/35‑1 GTGGGGGTTTTTGACCGGATTGAGGAAAAGCGTGA < 1:15654493/35‑1 GTGGGGGTTTTTGACCGGATTGAGGAAAAGCGTGA > 1:2827159/1‑35 TGGGGGTTTTTGACCGGATTGAGGAAAAGCGTGAT < 1:8460306/35‑1 TGGGGGTTTTTGACCGGATTGAGGAAAAGCGTGAT < 1:8403665/35‑1 TGGGGGTTTTTGACCGGATTGAGGAAAAGCGTGAT < 1:16454337/35‑1 GGGGGTTTTTGACCGGATTGAGGAAAAGCGTGATG > 1:12141444/1‑35 GGGGGTTTTTGACCGGATTGAGGAAAAGCGTGATG > 1:17116813/1‑35 GGGGGTTTTTGACCGGATTGAGGAAAAGCGTGATG > 1:16758939/1‑35 GGGGGTTTTTGACCGGATTGAGGAAAAGCGTGATG > 1:15796366/1‑35 GGGGGTTTTTGACCGGATTGAGGAAAAGCGTGATG < 1:4546198/35‑1 GGGGGTTTTTGACCGGATTGAGGAAAAGCGTGATG < 1:543694/35‑1 GGGGTTTTTGACCGGATTGAGGAAAAGCGTGATGC > 1:19519135/1‑35 GGGGTTTTTGACCGGATTGAGGAAAAGCGTGATGC < 1:14413294/35‑1 GGGGTTTTTGACCGGATTGAGGAAAAGCGTGATGC > 1:2721627/1‑35 GGGGTTTTTGACCGGATTGAGGAAAAGCGTGATGC > 1:9373336/1‑35 GGGGTTTTTGACCGGATTGAGGAAAAGCGTGATGC > 1:19573375/1‑35 GGGGTTTTTGACCGGATTGAGGAAAACCGTGATGC > 1:14910801/1‑35 GCCAGGCTACCGAGTGGCGTCACAACCAGCTTACTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/280693‑280732 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggGGGTTTTTGACCGGATTGAGGAAAAGCGTGATGC > REL606/3006460‑3006493 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |