Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 643,362 IS150 (+) +3 bp 43.3% coding (598‑600/954 nt) ybeF ← predicted DNA‑binding transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 643362 =62 (0.720)44 (0.450) 24/46 NT 38.2% coding (600/954 nt) ybeF predicted DNA‑binding transcriptional regulator
?REL606 = 666130 NA (NA)noncoding (1443/1443 nt) IS150 repeat region
* ? REL606 = 64336461 (0.710)50 (0.510) 29/46 NT 41.6% coding (598/954 nt) ybeF predicted DNA‑binding transcriptional regulator
?REL606 664688 = NA (NA)noncoding (1/1443 nt) IS150 repeat region

Only 100 of 220 total aligned reads displayed.

CGTTGTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGTAGTGGATTTCCCTCGCGGCAAATTAACACCA  >  REL606/643328‑643396
                                  |                                  
cGTTGTCGATAGTCCCTCTGTCATCTTCTAAagag                                    >  1:15990909/1‑35 (MQ=255)
cGTTGTCGATAGTCCCTCTGTCATCTTCTAAagag                                    >  1:7507823/1‑35 (MQ=255)
 gTTGTCGATAGTCCCTCTGTCATCTTCTAAagagt                                   <  1:5306852/35‑2 (MQ=255)
 gTTGTCGATAGTCCCTCTGTCATCTTCTAAagaga                                   <  1:13206476/35‑1 (MQ=255)
 gTTGTCGATAGTCCCTCTGTCATCTTCTAAagaga                                   >  1:11777513/1‑35 (MQ=255)
   tGTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGt                                 <  1:3285331‑M1/35‑2 (MQ=255)
   tGTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGt                                 <  1:16934588‑M1/35‑2 (MQ=255)
   tGTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGt                                 >  1:15831294‑M1/1‑34 (MQ=255)
    gTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGtg                                >  1:1350523‑M1/1‑33 (MQ=255)
    gTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGtg                                >  1:4315194‑M1/1‑33 (MQ=255)
      cGATAGTCCCTCTGTCATCTTCTAAAGAGagtagt                              >  1:11591275/1‑35 (MQ=255)
      cGATAGTCCCTCTGTCATCTTCTAAAGAGagtagt                              <  1:7231588/35‑1 (MQ=255)
      cGATAGTCCCTCTGTCATCTTCTAAAGAGAGtgta                              <  1:2115902‑M1/35‑5 (MQ=255)
      cGATAGTCCCTCTGTCATCTTCTAAAGAGAGtgta                              >  1:19495556‑M1/1‑31 (MQ=255)
       gATAGTCCCTCTGTCATCTTCTAAAGAGAGtgtac                             >  1:10472613‑M1/1‑30 (MQ=255)
       gATAGTCCCTCTGTCATCTTCTAAAGAGAGTAGTg                             <  1:12029970/35‑1 (MQ=255)
        aTAGTCCCTCTGTCATCTTCTAAAGAGAGtgtact                            <  1:17798511‑M1/35‑7 (MQ=255)
        aTAGTCCCTCTGTCATCTTCTAAAGAGAGtgtact                            >  1:17952832‑M1/1‑29 (MQ=255)
        aTAGTCCCTCTGTCATCTTCTAAAGAGAGtgtact                            >  1:205714‑M1/1‑29 (MQ=255)
        aTAGTCCCTCTGTCATCTTCTAAAGAGAGtgtact                            >  1:8862281‑M1/1‑29 (MQ=255)
         tAGTCCCTCTGTCATCTTCTAAAGAGAGtgtactg                           <  1:18186133‑M1/35‑8 (MQ=255)
         tAGTCCCTCTGTCATCTTCTAAAGAGAGTAGTGGa                           >  1:6443088/1‑35 (MQ=255)
         tAGTCCCTCTGTCATCTTCTAAAGAGAGTAGTGGa                           >  1:297577/1‑35 (MQ=255)
          aGTCCCTCTGTCATCTTCTAAAGAGAGtgtactgc                          >  1:12117068‑M1/1‑27 (MQ=255)
          aGTCCCTCTGTCATCTTCTAAAGAGAGtgtactgc                          <  1:16593739‑M1/35‑9 (MQ=255)
          aGTCCCTCTGTCATCTTCTAAAGAGAGTAGTGGAt                          >  1:2228450/1‑35 (MQ=255)
           tccaactttttggggtcagtacaGAGTAGTGGAtt                         <  1:15452338‑M1/12‑1 (MQ=255)
           gTCCCTCTGTCATCTTCTAAAGAGAGtgtactgca                         >  1:4546397‑M1/1‑26 (MQ=255)
            tCCCTCTGTCATCTTCTAAAGAGAGtgtactgcac                        >  1:18659308‑M1/1‑25 (MQ=255)
            tCCCTCTGTCATCTTCTAAAGAGAGtgtactgcac                        <  1:16044636‑M1/35‑11 (MQ=255)
            tCCCTCTGTCATCTTCTAAAGAGAGTAGTGGAttt                        <  1:1358543/35‑1 (MQ=255)
            tCCCTCTGTCATCTTCTAAAGAGAGTAGTGGAttt                        >  1:19860077/1‑35 (MQ=255)
            tCCCTCTGTCATCTTCTAAAGAGAGTAGTGGAttt                        <  1:352722/35‑1 (MQ=255)
            ccaactttttggggtcagtacaGAGTAGTGGAttt                        >  1:26730‑M1/23‑35 (MQ=255)
             caactttttggggtcagtacaGAGTAGTGGATTTc                       <  1:1006387‑M1/14‑1 (MQ=255)
              ccTCTGTCATCTTCTAAAGAGAGtgtactgcaccc                      >  1:3818813‑M1/1‑23 (MQ=255)
              ccTCTGTCATCTTCTAAAGAGAGTAGTGGATTTcc                      <  1:111495/35‑1 (MQ=255)
              aactttttggggtcagtacaGAGTAGTGGATTTcc                      >  1:7205599‑M1/21‑35 (MQ=255)
               ctctGTCATCTTCTAAAGAGAGTAGTGGATTTccc                     <  1:17345660/35‑1 (MQ=255)
               ctctGTCATCTTCTAAAGAGAGTAGTGGATTTccc                     >  1:17480091/1‑35 (MQ=255)
               ctctGTCATCTTCTAAAGAGAGTAGTGGATTTacc                     <  1:11950747/35‑1 (MQ=255)
               actttttggggtcagtacaGAGTAGTGGATTTccc                     <  1:12659091‑M1/16‑1 (MQ=255)
                tctGTCATCTTCTAAAGAGAGtgtactgcacccat                    <  1:6062652‑M1/35‑15 (MQ=255)
                tctGTCATCTTCTAAAGAGAGTAGTTGATTTCCCt                    >  1:10139669/1‑35 (MQ=255)
                tctGTCATCTTCTAAAGAGAGTAGTGGATTTCCCt                    >  1:17081136/1‑35 (MQ=255)
                ctttttggggtcagtacaGAGTAGTGGATTTCCCt                    <  1:4857888‑M1/17‑1 (MQ=255)
                ctttttggggtcagtacaGAGTAGTGGATTTCCCt                    <  1:16872030‑M1/17‑1 (MQ=255)
                 tttttggggtcagtacaGAGTAGTGGATTTCCCTc                   >  1:11712572‑M1/18‑35 (MQ=255)
                 tttttggggtcagtacaGAGTAGTGGATTTCCCTc                   <  1:13882523‑M1/18‑1 (MQ=255)
                 tttttggggtcagtacaGAGTAGTGGATTTCCCTc                   >  1:2779134‑M1/18‑35 (MQ=255)
                 ctGTCATCTTCTAAAGAGAGtgtactgcacccatt                   >  1:8426651‑M1/1‑20 (MQ=255)
                 ctGTCATCTTCTAAAGAGAGtgtactgcacccatt                   <  1:8945346‑M1/35‑16 (MQ=255)
                 ctGTCATCTTCTAAAGAGAGTAGTGGATTTCCCTc                   <  1:15060234/35‑1 (MQ=255)
                 ctGTCATCTTCTAAAGAGAGTAGTGGATTTCCCTc                   >  1:12783461/1‑35 (MQ=255)
                 ctGTCATCTTCTAAAGAGAGTAGTGGATTTCCCTc                   >  1:4939588/1‑35 (MQ=255)
                  tatcaTCTTCTAAAGAGAGtgtactgcacccattt                  >  1:14618321‑M1/3‑19 (MQ=255)
                  tGTCATCTTCTAAAGAGAGtgtactgcacccattt                  >  1:12318039‑M1/1‑19 (MQ=255)
                  tGTCATCTTCTAAAGAGAGTAGTGGATTTCCCTcg                  <  1:3941080/35‑1 (MQ=255)
                   tttggggtcagtacaGAGTAGTGGATTTCCCTcgc                 <  1:2564026‑M1/20‑1 (MQ=255)
                   tttggggtcagtacaGAGTAGTGGATTTCCCTcgc                 >  1:13398308‑M1/16‑35 (MQ=255)
                   tttggggtcagtacaGAGTAGTGGATTTCCCTcgc                 >  1:10831412‑M1/16‑35 (MQ=255)
                   gTCATCTTCTAAAGAGAGtgtactgcacccatttt                 <  1:4780553‑M1/35‑18 (MQ=255)
                   gTCATCTTCTAAAGAGAGTAGTGTATTTCCCTcgc                 >  1:17593165/1‑35 (MQ=255)
                    tCATCTTCTAAAGAGAGtgtactgcacccattttg                >  1:12949379‑M1/1‑17 (MQ=255)
                    tCATCTTCTAAAGAGAGtgtactgcacccattttg                >  1:16360168‑M1/1‑17 (MQ=255)
                    tCATCTTCTAAAGAGAGTAGTGGATTTCCCTcgcg                >  1:3510341/1‑35 (MQ=255)
                    tCATCTTCTAAAGAGAGTAGTGGATTTCCCTcgcg                <  1:4852651/35‑1 (MQ=255)
                     tggggtcagtacaGAGTAGTGGATTTCCCTCGCgg               <  1:10455754‑M1/22‑1 (MQ=255)
                     tggggtcagtacaGAGTAGTGGATTTCCCTCGCgg               <  1:19132983‑M1/22‑1 (MQ=255)
                     cATCTTCTAAAGAGAGtgtactgcacccattttgt               <  1:5140496‑M1/35‑20 (MQ=255)
                     cATCTTCTAAAGAGAGtgtactgcacccattttgt               <  1:15644369‑M1/35‑20 (MQ=255)
                      ggggtcagtacaGAGTAGTGGATTTCCCTCGCGGc              >  1:16137706‑M1/13‑35 (MQ=255)
                        ggtcagtacaGAGTAGTGGATTTCCCTCGCGGCaa            <  1:19706888‑M1/25‑1 (MQ=255)
                        cttctAAAGAGAGtgtactgcacccattttgttgg            >  1:6668402‑M1/1‑13 (MQ=255)
                        cttctAAAGAGAGTAGTGGATTTCCCTCGCGGCaa            >  1:20236527/1‑35 (MQ=255)
                        cttctAAAGAGAGTAGTGGATTTCCCTCGCGGCaa            <  1:14496068/35‑1 (MQ=255)
                         ttctAAAGAGAGtgtactgcacccattttgttgga           <  1:20335958‑M1/35‑24 (MQ=255)
                         ttctAAAGAGAGTAGTGGATTTCCCTCGCGGCaaa           <  1:6951708/35‑1 (MQ=255)
                         ttctAAAGAGAGTAGTGGATTTCCCTCGCGGCaaa           >  1:20165811/1‑35 (MQ=255)
                         ttctAAAGAGAGTAGTGGATTTCCCTCGCGGCaaa           <  1:5185035/35‑1 (MQ=255)
                          tctAAAGAGAGtgtactgcacccattttgttggac          <  1:7770246‑M1/35‑25 (MQ=255)
                          tctAAAGAGAGtgtactgcacccattttgttggac          <  1:66266‑M1/35‑25 (MQ=255)
                          tctAAAGAGAGTAGTGGATTTCCCTCGCGGCAAAt          >  1:14662567/1‑35 (MQ=255)
                          tctAAAGAGAGTAGTGGATTTCCCTCGCGGCAAAt          <  1:8511478/35‑1 (MQ=255)
                          tctAAAGAGAGTAGTGGATTTCCCTCGCGGCAAAt          >  1:9378779/1‑35 (MQ=255)
                           ctAAAGAGAGTAGTGGATTTCCCTCGCGGCAAAtt         <  1:5536988/35‑1 (MQ=255)
                           cagtacaGAGTAGTTGATTTCCCTCGCGGCAAAtt         <  1:1038461‑M1/28‑1 (MQ=255)
                           cagtacaGAGTAGTGGATTTCCCTCGCGGCAAAtt         <  1:16227043‑M1/28‑1 (MQ=255)
                             aaaGAGAGtgtactgcacccattttgttggacgat       <  1:18298874‑M1/35‑28 (MQ=255)
                             aaaGAGAGTAGTGGATTTCCCTCGCTGCAAATTaa       >  1:19687236/1‑35 (MQ=255)
                              tacaGAGTAGTGGATTTCCCTCGCGGCAAATTAac      >  1:15258080‑M1/5‑35 (MQ=255)
                              aaGAGAGTAGTGGATTTCCCTCGCGCCAAATTaaa      >  1:19060858/1‑34 (MQ=255)
                               agagagTAGTGGATTTCCCTCGCGGCAAATTAaca     <  1:4115302/35‑1 (MQ=255)
                               acaGAGTAGTGGATTTCCCTCGCGGCCAATTAaca     <  1:19757912‑M1/32‑1 (MQ=255)
                               acaGAGTAGTGGATTTCCCTCGCGGCAAATTAaca     >  1:17851754‑M1/4‑35 (MQ=255)
                                 aGAGTAGTGGATTTCCCTCGCGGCAAATTAACAcc   <  1:17138412‑M1/34‑1 (MQ=255)
                                 aGAGTAGTGGATTTCCCTCGCGGCAAATTAACAcc   >  1:1953474‑M1/2‑35 (MQ=255)
                                  gagTAGTGGATTTCCCTCTCGGCAAATTAACACCa  >  1:4097562/1‑35 (MQ=255)
                                  gagTAGTGGATTTCCCTCGCGGCAAATTAACACCa  >  1:5944404/1‑35 (MQ=255)
                                  gagTAGTGGATTTCCCTCGCGGCAAATTAACACCa  <  1:3623576/35‑1 (MQ=255)
                                  |                                  
CGTTGTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGTAGTGGATTTCCCTCGCGGCAAATTAACACCA  >  REL606/643328‑643396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.