Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | REL606 | 2,333,538 | +T | 100% | intergenic (+34/+34) | ECB_02200 → / ← nuoN | YadA protein/NADH dehydrogenase subunit N |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 2,333,538 | 1 | .→T | 100.0% | 197.8 | 71 | intergenic (+34/+34) | ECB_02200/nuoN | YadA protein/NADH dehydrogenase subunit N |
Reads supporting (aligned to +/- strand): new base (22/49): ref base (0/0): total (22/49) |
Only 100 of 105 total aligned reads displayed.
ATATAAACCGTCCAACATTATGGGGTCAGTTCACA‑TGTCGGCGGC‑TTTCTGACTTACAAACTAACA > REL606/2333504‑2333569 | atatAGACCGTCCAACATTATGGGGTCAGTTcaca > 1:5657189/1‑35 (MQ=255) atatAAACCGTCCAACATTATGGGGTCAGTTcaca < 1:13785742/35‑1 (MQ=255) atatAAACCGTCCAACATTATGGGGTCAGTTcaca < 1:5611476/35‑1 (MQ=255) tataAACCGTCCAACATTATGGGGTCAGTTCACA‑t > 1:8146048/1‑35 (MQ=255) tataAACCGTCCAACATTATGGGGTCAGTTCACA‑t > 1:18747832/1‑35 (MQ=255) tataAACCGTCCAACATTATGGGGTCAGTTCACA‑t < 1:8120661/35‑1 (MQ=255) tataAACCGTCCAACATTATGGGGTCAGTTCACA‑t > 1:4570736/1‑35 (MQ=255) tataAACCGTCCAACATTATGGGGTCAGTTCACA‑t > 1:4810474/1‑35 (MQ=255) tataAACCGTCCAACATTATGGGGTCAGTTCACA‑t < 1:2046524/35‑1 (MQ=255) tataAACCGTCCAACATTATGGGGTCAGTTCACA‑t < 1:12501974/35‑1 (MQ=255) tataAACCGTCCAACATTATGGGGTCAGTTCACA‑t < 1:347312/35‑1 (MQ=255) tataAACCGTCCAACATTATGGGGTCAGTTCACA‑t > 1:17059632/1‑35 (MQ=255) ataAACCGTCCAACATTATGGGGTCAGTTCACA‑tt < 1:3888858/35‑2 (MQ=255) ataAACCGTCCAACATTATGGGGTCAGTTCACA‑tt < 1:15211209/35‑2 (MQ=255) ataAACCGTCCAACATTATGGGGTCAGTTCACA‑tt > 1:13225227/1‑34 (MQ=255) ataAACCGTCCAACATTATGGGGTCAGTTCACA‑tt > 1:15772665/1‑34 (MQ=255) ataAACCGTCCAACATTATGGGGTCAGTTCACA‑tt < 1:7214457/35‑2 (MQ=255) ataAACCGTCCAACATTATGGGGTCAGTTCACA‑tt > 1:7702544/1‑34 (MQ=255) taAACCGTCCAGCATTATGGGGTCAGTTCACA‑ttg > 1:20513975/1‑33 (MQ=38) taAACCGTCCAACATTATGGGGTCAGTTCACA‑ttg > 1:3413619/1‑33 (MQ=255) taAACCGTCCAACATTATGGGGTCAGTTCACA‑ttg < 1:266588/35‑3 (MQ=255) taAACCGTCCAACATTATGGGGTCAGTTCACA‑ttg < 1:16494681/35‑3 (MQ=255) taAACCGTCCAACATTATGGGGTCAGTTCACA‑ttg < 1:11983225/35‑3 (MQ=255) taAACCGTCCAACATTATGGGGTCAGTTCACA‑ttg > 1:19162712/1‑33 (MQ=255) aaaCCTTCCAACATTATGGGGTCAGTTCACA‑ttgt > 1:16443964/1‑32 (MQ=37) aaaCCGTCCAACATTATGGGGTTAGTTCACA‑ttgt > 1:20021183/1‑32 (MQ=38) aaaCCGTCCAACATTATGGGGTCAGTTCACA‑ttgt > 1:20069362/1‑32 (MQ=255) aaaCCGTCCAACATTATGGGGTCAGTTCACA‑ttgt > 1:18662005/1‑32 (MQ=255) aaaCCGTCCAACATTATGGGGTCAGTTCACA‑ttgt < 1:3305966/35‑4 (MQ=255) aaaCCGTCCAACATTATGGGGTCAGTTCACA‑ttgt > 1:12846912/1‑32 (MQ=255) aaaCCGTCCAACATTATGGGGTCAGTTCACA‑ttgt < 1:10849101/35‑4 (MQ=255) ccGTCCAACATTATGGGGTCAGTTCACATTGTcgg < 1:14226400/35‑1 (MQ=25) ccGTCCAACATTATGGGGTCAGTTCACATTGTcgg < 1:4858043/35‑1 (MQ=25) ccGTCCAACATTATGGGGTCAGTTCACATTGTcgg < 1:20235872/35‑1 (MQ=25) ccGTCCAACATTATGGGGTCAGTTCACATTGTcgg < 1:5144/35‑1 (MQ=25) ccGTCCAACATTATGGGGTCAGTTCACATTGTcgg < 1:7189387/35‑1 (MQ=25) cGTCCAACATTATTGGGTCAGTTCACATTGTcggc > 1:10327375/1‑35 (MQ=25) cGTCCAACATTATGGGGTCAGTTCACATTGTcggc < 1:4251256/35‑1 (MQ=25) cGTCCAACATTATGGGGTCAGTTCACATTGTcggc < 1:9917999/35‑1 (MQ=25) cGTCCAACATTATGGGGTCAGTTCACATTGTcggc < 1:13877662/35‑1 (MQ=25) cGTCCAACATTATGGGCTCAGTTCACATTGTcggc > 1:7934190/1‑35 (MQ=21) gTCCAACATTATGGGGTCAGTTCACATTGTcggcg < 1:15841693/35‑1 (MQ=25) tCCAACATTATGGGGTCAGTTCACATTGTcggcgg > 1:1810856/1‑35 (MQ=25) tCCAACATTATGGGGTCAGTTCACATTGTcggcgg > 1:16440414/1‑35 (MQ=25) tCCAACATTATGGGGTCAGTTCACATTGTcggcgg > 1:17271616/1‑35 (MQ=25) tCCAACATTATGGGGTCAGCTCACATTGTcggcgg > 1:5664659/1‑35 (MQ=25) ccAACATTATGGGGTCAGTTCACATTGTCggcggc < 1:19145543/35‑1 (MQ=25) ccAACATTATGGGGTCAGTTCACATTGTCggcggc < 1:1927236/35‑1 (MQ=25) ccAACATTATGGGGTCAGTTCACATTGTCggcggc < 1:1497376/35‑1 (MQ=25) cAACATTATGGGGTCAGTTCACATTGTcggcgggt > 1:6179556/1‑33 (MQ=25) cAACATTATGGGGTCAGTTCACATTGTcggcgggc > 1:1266413/1‑33 (MQ=25) cAACATTATGGGGTCAGTTCACATTGTCGGCGGC‑t < 1:5580305/35‑1 (MQ=25) aaCATTATGGGGTCAGTTCACATTGTcggcggggt > 1:9052206/1‑32 (MQ=21) aaCATTATGGGGTCAGTTCACATTGTcggcggggt > 1:14368125/1‑32 (MQ=21) aaCATTATGGGGTCAGTTCACATTGTCGGCGGG‑tt > 1:17847890/1‑35 (MQ=21) aaCATTATGGGGTCAGTTCACATTGTCGGCGGG‑tt > 1:3826801/1‑35 (MQ=21) aaCATTATGGGGTCAGTTCACATTGTCGGCGGC‑tt < 1:8280049/35‑1 (MQ=25) aaCATTATGGGGTCAGTTCACATTGTCGGCGGC‑tt < 1:4376396/35‑1 (MQ=25) aCATTATGGGGTCAGTTCACATTGTCGGCGGG‑ttt > 1:9493833/1‑35 (MQ=21) aCATTATGGGGTCAGTTCACATTGTCGGCGGG‑ttt > 1:9669977/1‑35 (MQ=21) aCATTATGGGGTCAGTTCACATTGTCGGCGGG‑ttt > 1:10041497/1‑35 (MQ=21) aCATTATGGGGTCAGTTCACATTGTCGGCGGC‑ttt < 1:15553317/35‑1 (MQ=25) aCATTATGGGGTCAGTTCACATTGTCGGCGGC‑ttt < 1:17937637/35‑1 (MQ=25) aCATTATGGGGTCAGTTCACATTGTCGGCGGC‑ttt < 1:8198716/35‑1 (MQ=25) aCATTATGGGGTCAGTTCACATTGTCGGCGGC‑ttt < 1:3135182/35‑1 (MQ=25) aTTATGGGGTCAGTTCACATTGTCGGCGGC‑TTTCt < 1:9554168/35‑1 (MQ=25) aTTATGGGGTCAGTTCACATTGTCGGCGGC‑TTTCt < 1:17945618/35‑1 (MQ=25) aTTATGGGGTCAGTTCACATTGTCGGCGGC‑TTTCt < 1:4544/35‑1 (MQ=25) ttATGGGGTCAGTTCACATTGTCGGCGGN‑nnttnn > 1:12389096/1‑32 (MQ=16) ttATGGGGTCAGTTCACATTGTCGGCGGG‑tttttt > 1:1789381/1‑32 (MQ=12) ttATGGGGTCAGTTCACATTGTCGGCGGG‑tttttt > 1:2471731/1‑32 (MQ=12) ttATGGGGTCAGTTCACATTGTCGGCGGC‑TTTCTg < 1:6591807/35‑1 (MQ=25) ttATGGGGTCAGTTCACATTGTCGGCGGC‑TTTCTg < 1:20453096/35‑1 (MQ=25) tATGGGGTCAGTTCACATTGTCGGCGGC‑TTTCttc > 1:18593249/1‑33 (MQ=25) tATGGGGTCAGTTCACATTGTCGGCGGC‑TTTCTGa < 1:1577292/35‑1 (MQ=25) aTGGGGTCAGTTCACATTGTCGGGGGC‑TTTCTGAc < 1:15088932/35‑1 (MQ=21) aTGGGGTCAGTTCACATTGTCGGCGGCGTTTCTgt > 1:18852736/1‑34 (MQ=12) aTGGGGTCAGTTCACATTGTCGGCGGC‑TTTCTGAc < 1:20347012/35‑1 (MQ=25) tGGGGTCAGTTCACATTGTCGGCGGC‑TTTCTGACt < 1:16512395/35‑1 (MQ=25) tGGGGTCAGTTCACATTGTCGGCGGC‑TTTCTGACt < 1:10105452/35‑1 (MQ=25) tGGGGTCAGTTCACATTGTCGGCGGC‑TTTCTGACt < 1:7214827/35‑1 (MQ=25) gTCAGTTCACATTGTCGGCGGC‑TTTCTGACTTACa < 1:9199506/35‑1 (MQ=25) gTCAGTTCACATTGTCGGCGGC‑TTTCTGACTTACa < 1:11257903/35‑1 (MQ=25) gTCAGTTCACATTGTCGGCGGC‑TTTCTGACTTACa < 1:18588528/35‑1 (MQ=25) gTCAGTTCACATTGTCGGCGGC‑TTTCTGACTTACa < 1:4490974/35‑1 (MQ=25) tCAGTTCACATTGTCGGCGGC‑TTTCTGACTTACaa < 1:6780681/35‑1 (MQ=25) cAGTTCACATTGTCGGCGGC‑TTTCTGACTTACaaa < 1:672863/35‑1 (MQ=25) cAGTTCACATTGTCGGCGGC‑TTTCTGACTTACaaa < 1:10747815/35‑1 (MQ=25) cAGTTCACATTGTCGGCGGC‑TTTCTGACTTACaaa < 1:1767943/35‑1 (MQ=25) cAGTTCACATTGTCGGCGGC‑TTTCTGACTTACaaa < 1:12460287/35‑1 (MQ=25) aGTTCACATTGTCGGCGGG‑TTTTTTTCTTACaaaa > 1:941611/1‑34 (MQ=2) aGTTCACATTGTCGGCGGC‑TTTCTGACTTACAAAc < 1:2688250/35‑1 (MQ=25) aGTTCACATTGTCGGCGGC‑TTTCTGACTTACAAAc < 1:3243733/35‑1 (MQ=25) gTTCACATTGTCGGCGGC‑TTTCTGACTTACAAACt < 1:15600706/35‑1 (MQ=25) gTTCACATTGTCGGCGGC‑TTTCTGACTTACAAACt < 1:18475079/35‑1 (MQ=25) gTTCACATTGTCGGCGGC‑TTTCTGACTTACAAACt < 1:11516564/35‑1 (MQ=25) ttCACATTGTCGGCGGC‑TTTCTGACTTACAAACTa < 1:4104626/35‑1 (MQ=25) ttCACATTGTCGGCGGC‑TTTCTGACTTACAAACTa < 1:13288691/35‑1 (MQ=25) tCACATTGTCGGCGGC‑TTTCTGACTTACAAACTaa < 1:11929069/35‑1 (MQ=25) caca‑TGTCGGCGGC‑TTTCTGACTTACAAACTAACa < 1:8012939/35‑1 (MQ=255) | ATATAAACCGTCCAACATTATGGGGTCAGTTCACA‑TGTCGGCGGC‑TTTCTGACTTACAAACTAACA > REL606/2333504‑2333569 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |