New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3265224 = | 32 (0.310) | 6 (0.070) | 3/38 | NT | 9.0% | coding (1028/1434 nt) | dacB | D‑alanyl‑D‑alanine carboxypeptidase |
? | REL606 | = 3603631 | 96 (1.180) | coding (778/1014 nt) | yhjD | conserved inner membrane protein |
GGGTCGGACGCCGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTCGATATTGGAAACACCATTATTGCC > REL606/3265190‑3265258 | ttctggcggttgccgcgccaccgtccgcgcaaaaa > 1:8684602‑M1/35‑35 (MQ=255) ttcgggcggttgccgcgccaccgtccgcgcaaaaa > 1:13517834‑M1/35‑35 (MQ=255) gggTCGGACGCCGTGCGTCAGATCCTGCGCCAGCa > 1:10911039/1‑35 (MQ=255) tctggcggttgccgcgccaccgtgcgcgcaaaaaa > 1:1373533‑M1/34‑35 (MQ=255) ggTCGGACGCCGTGCGTCAGATCCTGCGCCAGCaa < 1:1763193/35‑1 (MQ=255) ggTCGGACGCCGTGCGTCAGATCCTGCGCCAGCaa > 1:19172640/1‑35 (MQ=255) ggTCGGACGCCGTGCGTCAGATCCTGCGCCAGCaa < 1:1483564/35‑1 (MQ=255) ggTCGGACGCCGTGCGTCAGATCCTGCGCCAGCaa < 1:20524190/35‑1 (MQ=255) ggTCGGACGCCGTGCGTCAGATCCTGCGCCAGCaa > 1:379719/1‑35 (MQ=255) ggTCGGACGCCGTGCGTCAGATCCTGCGCCAGCaa > 1:4022940/1‑35 (MQ=255) ggTCGGACGCCGTGCGTCAGATCCTGCGCCAGCaa < 1:5958482/35‑1 (MQ=255) ggTCGGACGCCGTGCGTCAGATCCTGCGCCAGCaa < 1:11448520/35‑1 (MQ=255) ggTCGGACGCCGTGCGTCAGATCCTGCGCCAGCaa > 1:9222279/1‑35 (MQ=255) gTCGGACGCCGTGCGTCAGATCCTGCGCCCGAAAg > 1:5027713/1‑35 (MQ=37) tggcggttgccgcgccaccgtccgcgcaaaaAAGc > 1:8090311‑M1/32‑35 (MQ=255) tCGGACGCCGTGCGTCAGATCCTTCGCCAGCAAGc > 1:19839025/1‑35 (MQ=255) tCGGACGCCGTGCGTCAGATCCTGCGCCAGCAAGc < 1:7120986/35‑1 (MQ=255) tCGAACCCCGCGCGTCAGATCCTGCGCCAGCAAGc < 1:13245117/35‑1 (MQ=25) ggcgtttgccgcgccaccgtccgcgcaaaaAAGcc > 1:4416670‑M1/31‑35 (MQ=255) cGGACGCCGTGCGTCAGATCCTGCGCCAGCAAGcc > 1:17874245/1‑35 (MQ=255) cGGACGCCGTGCGTCAGATCCTGCGCCAGCAAGcc > 1:6789556/1‑35 (MQ=255) ggACGCCGTGCGTCAGATCCTGCGCCAGCAAGCCg > 1:238753/1‑35 (MQ=255) gccGCCGTGCGTCAGATCCTGCGCCAGCAAGCCgg < 1:3168044/33‑1 (MQ=255) gACGCCGTGCGTCAGATCCTGCGCCAGCAAGCCgg > 1:2085819/1‑35 (MQ=255) aCGCCGTGCGTCAGATCCTGCGCCAGCAAGCCGgt > 1:6327389/1‑35 (MQ=255) gCCGTGCGTCAGATCCTGCGCCAGCAAGCCGgtgt > 1:2129458/1‑35 (MQ=255) gCCGTGCGTCAGATCCTGCGCCAGCAAGCCGgtgt > 1:2504032/1‑35 (MQ=255) gCCGTGCGTCAGATCCTGCGCCAGCAAGCCGgtgt > 1:9517092/1‑35 (MQ=255) ccGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTc > 1:9904023/1‑35 (MQ=255) ccGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTc > 1:14789361/1‑35 (MQ=255) ccGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTc > 1:15015677/1‑35 (MQ=255) cGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTCg > 1:5533038/1‑35 (MQ=255) gTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTCGa > 1:8597273/1‑35 (MQ=255) tGCGTCAGATCCTGCGCCAGCAAGCCGGTGTCGat > 1:17607375/1‑35 (MQ=255) cGTCAGATCCTGCGCCAGCAAGCCGGTGTCGatat > 1:10858690/1‑35 (MQ=255) gTCAGATCCTGCGCCAGCAAGCCGGTGTCGATAtt > 1:19257470/1‑35 (MQ=255) tCAGATCCTGCGCCAGCAAGCCGGTGTCGATATTg > 1:19722940/1‑35 (MQ=255) cAGATCCTGCGCCAGCAAGCCGGTGTCGATATTgg > 1:1268076/1‑35 (MQ=255) cAGATCCTGCGCCAGCAAGCCGGTGTCGATATTgg > 1:10684130/1‑35 (MQ=255) gATCCTGCGCCAGCAAGCCGGTGTCGATATTGGaa > 1:11427263/1‑35 (MQ=255) cacccTGCGCCAAAAAGCCGGTGTCGATATTGGaa < 1:2831142/32‑1 (MQ=25) aTCCTGCGCCAGCAAGCCGGTGTCGATATTGGaaa > 1:11665091/1‑35 (MQ=255) tCCTGCGCCAGCAAGCCGGTGTCGATATTGGAAac > 1:15180618/1‑35 (MQ=255) cccTGCGCAAAAAAGCCGGTGTCGATATTGGAAac < 1:20478837/34‑1 (MQ=21) cgtgcgcaaaaAAGCCGGTGTCGATATTGGAAaca > 1:10545634‑M1/12‑35 (MQ=255) ccTGCGCCAGCAAGCCGGTGTCGATATTGGAAaca > 1:3314442/1‑35 (MQ=255) cTGCGCCAGCAAGCCGGTGTCGATATTGGAAacac > 1:12884338/1‑35 (MQ=255) cTGCGCCAGCAAGCCGGTGTCGATATTGGAAacac > 1:13715253/1‑35 (MQ=255) cTGCGCCAGCAAGCCGGTGTCGATATTGGAAacac > 1:6003032/1‑35 (MQ=255) tGCGCCAGCAAGCCGGTGTCGATATTGGAAACAcc > 1:15108774/1‑35 (MQ=255) ngcgcCAGCAAGCCGGTGTCGATATTGGAAACAcc > 1:3897731/2‑35 (MQ=255) cgcgcaaaaAAGCCGGTGTCGATATTGGAAACAcc > 1:4595640‑M1/10‑35 (MQ=255) cgcccaaaaAAGCCGGTGTCGATATTGGAAACAcc > 1:720638‑M1/10‑35 (MQ=255) gcgcaaaaAAGCCGGTGTCGATATTGGAAACACCa > 1:9190498‑M1/9‑35 (MQ=255) gcccaaaaAAGCCGGTGTCGATATTGGAAACACCa > 1:4220874‑M1/9‑35 (MQ=255) cgcaaaaAAGCCGGTGTCGATATTGGAAACACCat > 1:16740330‑M1/8‑35 (MQ=255) gcCAGCAAGCCGGTGTCGATATTGGAAACACCatt > 1:16678355/1‑35 (MQ=255) gcCAGCAAGCCGGTGTCGATATTGGAAACACCatt > 1:14687708/1‑35 (MQ=255) gcCAGCAAGCCGGTGTCGATATTGGAAACACCatt > 1:14861876/1‑35 (MQ=255) acaaaaAAGCCGGTGTCGATATTGGAAACACCatt > 1:7740324‑M1/7‑35 (MQ=255) acaaaaAAGCCGGTGTCGATATTGGAAACACCatt > 1:7882598‑M1/7‑35 (MQ=255) acaaaAAGCCGGTGTCGATATTGGAAACACCatta > 1:13024536‑M1/6‑35 (MQ=255) gagaAAGCCGGTGTCGATATTGGAAACACCattat > 1:14533975‑M1/5‑35 (MQ=255) cAGCAAGCCGGTGTCGATATTGGAAACACCattat > 1:10714860/1‑35 (MQ=255) aaaaAAGCCGGTGTCGATATTGGAAACACCattat > 1:17684407‑M1/5‑35 (MQ=255) aaaaAAGCCGGTGTCGATATTGGAAACACCattat > 1:7095330‑M1/5‑35 (MQ=255) tctAAGCCGGTGTCGATATTGGAAACACCattatt > 1:13594444‑M1/4‑35 (MQ=255) aaaAAGCCGGTGTCGATATTGGAAACACCattatt > 1:4955848‑M1/4‑35 (MQ=255) aGCAAGCCGGTGTCGATATTGGAAACACCattatt > 1:20499667/1‑35 (MQ=255) aGCAAGCCGGTGTCGATATTGGAAACACCattatt > 1:17531551/1‑35 (MQ=255) gCAAGCCGGTGTCGATATTGGAAACACCATTATTg > 1:5041569/1‑35 (MQ=255) cAAGCCGGTGTCGATATTGGAAACACCATTATTGc > 1:8342777/1‑35 (MQ=255) cAAGCCGGTGTCGATATTGGAAACACCATTATTGc > 1:10109182/1‑35 (MQ=255) cAAGCCGGTGTCGATATTGGAAACACCATTATTGc > 1:11344441/1‑35 (MQ=255) cAAGCCGGTGTCGATATTGGAAACACCATTATTGc > 1:5327552/1‑35 (MQ=255) aAAGCCGGTGTCGATATTGGAAACACCATTATTGc > 1:6933148‑M1/2‑35 (MQ=255) aAAGCCGGTGTCGATATTGGAAACACCATTATTGc > 1:5477107‑M1/2‑35 (MQ=255) aAAGCCGGTGTCGATATTGGAAACACAATTATTGc > 1:4903020‑M1/2‑35 (MQ=255) AAGCCGTTGTCGATATTGGAAACACCATTATTGcc < 1:7275202‑M1/35‑1 (MQ=255) AAGCCGGTGTCGATATTGGAAACACCGTTATTGcc < 1:1145561‑M1/35‑1 (MQ=255) AAGCCGGTGTCGATATTGGAAACACCATTATTGcc > 1:8366555‑M1/1‑35 (MQ=255) AAGCCGGTGTCGATATTGGAAACACCATTATTGcc < 1:8708752‑M1/35‑1 (MQ=255) AAGCCGGTGTCGATATTGGAAACACCATTATTGcc < 1:9058543‑M1/35‑1 (MQ=255) AAGCCGGTGTCGATATTGGAAACACCATTATTGcc < 1:12610426‑M1/35‑1 (MQ=255) AAGCCGGTGTCGATATTGGAAACACCATTATTGcc > 1:10669520‑M1/1‑35 (MQ=255) AAGCCGGTGTCGATATTGGAAACACCATTATTGcc < 1:210777‑M1/35‑1 (MQ=255) AAGCCGGTGTCGATATTGGAAACACCATTATTGcc > 1:9672832‑M1/1‑35 (MQ=255) AAGCCGGTGTCGATATTGGAAACACCATTATTGcc > 1:17671002‑M1/1‑35 (MQ=255) | GGGTCGGACGCCGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTCGATATTGGAAACACCATTATTGCC > REL606/3265190‑3265258 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |