New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3190470 = | 58 (0.560) | 12 (0.120) | 5/46 | NT | 19.7% | coding (511/1269 nt) | yhaO | predicted transporter |
? | REL606 | 4585732 = | 42 (0.430) | coding (509/1023 nt) | yjjN | predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding |
TTCGACCGGCATGGTGCTGACCAAGCTGCTGGTGG‑‑‑‑‑‑‑‑‑‑‑ < REL606/3190504‑3190470 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGGCGGGGCCA > REL606/4585732‑4585742 TTCGACCGGCATGGTGCTGACCAAGCTGCTGGTGG > 1:14195444/1‑35 TCGACCGGCATGGTGCTGACCAAGCTGCTGGTGGG > 1:6214916/1‑35 TCGACCGGCATGGTGCTGACCAAGCTGCTGGTGGG > 1:14047314/1‑35 TCGACCGGCATGGTGCTGACCAAGCTGCTGGTGGG > 1:19973809/1‑35 TCGACCGGCATGGTGCTGACCAAGCTGCTGGGGGG > 1:19151639/1‑35 CGACCGGCATGGTGCTGACCAAGCTGCTGGTGGGG > 1:4776801/1‑35 GACCGGCATGGTGCTGACCAAGCTGCTGGTGGGcg > 1:11371999/1‑33 GACCGGCATGGTGCTGACCAAGCTGCTGGTGGGcg > 1:5661890/1‑33 GACCGGCATGGTGCTGACCAAGCTGCTGGTGGGGG > 1:6974053/1‑35 GACCGGCATGGTGCTGACCAAGCTGCTGGTGGGGG > 1:18551789/1‑35 GACCGGCATGGTGCTGACCAAGCTGCTGGTGGGGG > 1:19283847/1‑35 ACCGGCATGGTGCTGACCAAGCTGCTGGTGGGCGC > 1:10718703/1‑35 ACCGGCATGGTGCTGACCAAGCTGCTGGTGGGCGC > 1:15586999/1‑35 CCGGCATGGTGCTGACCAAGCTGCTGGTGGGGGgg > 1:8646032/1‑33 CCGGCATGGTGCTGACCAAGCTGCTGGTGGGGGCG > 1:19376094/1‑35 CCGGCATGGTGCTGACCAAGCTGCTGGTGGGCGCG > 1:19206156/1‑35 CCGGCATGGTGCTGACCAAGCTGCTGGTGGGCGCG > 1:9831368/1‑35 CGGCATGGTGCTGACCAAGCTGCTGGTGGGGCCGN > 1:20615978/1‑35 CGGCATGGTGCTGACCAAGCTGCTGGTGGGCGCGG > 1:3026104/1‑35 GGCATGGTGCTGACCAAGCTGCTGGTGGGCGCGGG > 1:14252824/1‑35 GCATGTTGCTGACCAAGCTGCTGGTGGGGGCGGGG > 1:13242958/1‑35 GCATGGTGCTGACCAAGCTGCTGGTGGGGGGGGGG > 1:15049191/1‑35 GCATGGTGCTGACCAAGCTGCTGGTGGGGGCGGGG > 1:1986747/1‑35 CATGGTGCTGACCAAGCTGCTGGTGGGGGCGGGGC > 1:5544946/1‑35 CATGGTGCTGACCAAGCTGCTGGTGGGCGCGGGGC > 1:2914075/1‑35 ATGGTGCTGACCAAGCTGCTGGTGGGCGCGGGGCt > 1:11840951/1‑34 ATGGTGCTGACCAAGCTGCTGGTGGGCGCGGGGCC > 1:20287833/1‑35 TGGTGCTGACCAAGCTGCTGGTGGGGGGGGGGCCg > 1:13853646/1‑34 TGGTGCTGACCAAGCTGCTGGTGGGGGCGGGGgcg > 1:675483/1‑32 TTCGACCGGCATGGTGCTGACCAAGCTGCTGGTGG‑‑‑‑‑‑‑‑‑‑‑ < REL606/3190504‑3190470 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGGCGGGGCCA > REL606/4585732‑4585742 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |