New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 4154898 | 72 (0.700) | 7 (0.080) | 5/42 | NT | 8.7% | intergenic (‑261/‑101) | coaA/thrU | pantothenate kinase/tRNA‑Thr |
? | REL606 | 4351442 = | 84 (0.930) | intergenic (+50/‑88) | groEL/yjeI | chaperonin GroEL/hypothetical protein |
GTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4154862‑4154898 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgGGGGTTTTTCTTTT > REL606/4351442‑4351455 GTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGC < 1:9075035/35‑1 GTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGC > 1:14068159/1‑35 GTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGC < 1:5665044/35‑1 TTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCT < 1:2297642/35‑1 TTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCT > 1:17445786/1‑35 TTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCT < 1:4206770/35‑1 TGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTG > 1:17087980/1‑35 TGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTG < 1:15861427/35‑1 TGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTG > 1:2395850/1‑35 TGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTG > 1:15197735/1‑35 TGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTG < 1:5717949/35‑1 TGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTG < 1:12141354/35‑1 GAAAAAGTGTTCTAATCTGCCCTCCGTTCGGCTGG > 1:10742968/1‑35 GAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGG > 1:2699231/1‑35 GAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGG > 1:7929560/1‑35 GAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGG > 1:953809/1‑35 GAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGG > 1:9550333/1‑35 GAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGG > 1:14160537/1‑35 AAAAAGTGTGCTAATCTGCTCTCCGTTCGGCTGGG > 1:19953655/1‑35 AAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGG > 1:15244574/1‑35 AAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGG > 1:2394914/1‑35 AAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGG > 1:15625991/1‑35 AAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGt > 1:12114168/1‑34 AAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGt > 1:3881867/1‑34 AAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGt > 1:6972542/1‑34 AAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGG > 1:314237/1‑35 AAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGG > 1:18848101/1‑35 AAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGG > 1:1183860/1‑35 AAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGtg > 1:1925384/1‑33 AAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGGt > 1:3406774/1‑34 AAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGGt > 1:6831891/1‑34 AAAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGGG > 1:6602774/1‑35 AAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGTGT > 1:15280077/1‑35 AAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGGtt > 1:5410414/1‑33 AAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGGGT > 1:15706328/1‑35 AAGTGTGCTAATCTGCCCTCCGTTCGGCTGGGGGT > 1:19241495/1‑35 AGTGTGCTAATCTGCCCTCCGTTCGGCTGGGGTTT > 1:10071096/1‑35 GTGTGCTAATCTGCCCTCCGTTCGGCTGGGTGTTT > 1:4646702/1‑35 TGTGCTAATCTGCCCTCCGTTCGGCTGGGTGTTTT > 1:10508596/1‑35 TGTGCTAATCTGCCCTCCGTTCGGCTGGGGGTTTT > 1:6766460/1‑35 TGCTAATCTGCCCTCCGTTCGGCTGGGTGTTTTTC > 1:5779491/1‑35 TGCTAATCTGCCCTCCGTTCGGCTGGGGGTTTTTC > 1:7328418/1‑35 AATCTGCCCTCCGTTCGGCTGGGTGTTTTTCTTTT > 1:2005270/1‑35 GTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4154862‑4154898 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgGGGGTTTTTCTTTT > REL606/4351442‑4351455 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |