New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 640115 = | 106 (1.030) | 28 (0.380) | 5/34 | NT | 24.6% | intergenic (+33/+22) | cspE/ccrB | cold shock protein E/camphor resistance protein CrcB |
? | REL606 | 2746531 = | 97 (1.330) | coding (671/873 nt) | hypB | GTP hydrolase involved in nickel liganding into hydrogenases |
Only 100 of 141 total aligned reads displayed.
GGCCTCAACCGCACACTAAAGACCAAAAAAAAACCCGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/640155‑640115 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctgaAATATCCGCATATGTTTGCCGCCGCCTCGCTGAT > REL606/2746531‑2746564 GGCCTCAACCGCACACTAAAGACCAAAAAAAAACC < 1:5928910/35‑1 GGCCTCAACCGCACACTAAAGACCAAAAAAAAACC < 1:8068183/35‑1 GGCCTCAACCGCACACTAAAGACCAAAAAAAAACC < 1:8801774/35‑1 GGCCTCAACCGCACACTAAAGACCAAAAAAAAACC < 1:12716487/35‑1 GCCTCAACCGCACACTAAAGACCAAAAAAAAACCC < 1:12166108/35‑1 GCCTCAACCGCACACTAAAGACCAAAAAAAAACCC < 1:18977278/35‑1 GCCTCAACCGCACACTAAAGACCAAAAAAAAACCC < 1:18789380/35‑1 GCCTCAACCGCACACTAAAGACCAAAAAAAAACCC > 1:18597881/1‑35 GCCTCAACCGCACACTAAAGACCAAAAAAAAACCC > 1:18015238/1‑35 CCTCAACCGCACACTAAAGACCAAAAAAAAACCCG > 1:11861123/1‑35 CCTCAACCGCACACTAAAGACCAAAAAAAAACCCG < 1:11500702/35‑1 CCTCAACCGCACACTAAAGACCAAAAAAAAACCCG < 1:8181045/35‑1 CCTCAACCGCACACTAAAGACCAAAAAAAAACCCG < 1:9837443/35‑1 CCTCAACCGCACACTAAAGACCAAAAAAAAACCCG < 1:1596340/35‑1 CCTCAACCGCACACTAAAGACCAAAAAAAAACCCG < 1:2006220/35‑1 TCAACCGCACACTAAAGACCAAAAAAAAACCCGCT > 1:681934/1‑35 TCAACCGCACACTAAAGACCAAAAAAAAACCCGCT < 1:6472917/35‑1 TCAACCGCACACTAAAGACCAAAAAAAAACCCGCT > 1:6365103/1‑35 TCAACCGCACACTAAAGACCAAAAAAAAACACGCT < 1:3593459/35‑1 CAACCGCACACTAAAGACCAAAAAAAAACCCGCTG > 1:19800603/1‑35 CAACCGCACACTAAAGACCAAAAAAAAACCCGCTG > 1:518581/1‑35 CAACCGCACACTAAAGACCAAAAAAAAACCCGCTG < 1:6957270/35‑1 CAACCGCACACTAAAGACCAAAAAAAAACCCGCTG < 1:8974168/35‑1 CAACCGCACACTAAAGACCAAAAAAAAACCCGCTG > 1:9915041/1‑35 AACCGCACGCTAAAGACCAAAAAAAAACCCGCTGA < 1:4985725/35‑1 AACCGCACACTAAAGACCAAAAAAAAACCCGCTGA < 1:18801464/35‑1 AACCGCACACTAAAGACCAAAAAAAAACCCGCTGA < 1:16671636/35‑1 AACCGCACACTAAAGACCAAAAAAAAACCCGCTGA > 1:17518592/1‑35 ggAAAAAAAAACCCGCTGAAATATCCGCATATGTT < 1:16074179/33‑1 gatAAAAAAAACCCGCTGAAATATCCGCATATGTT < 1:15676456/32‑1 tAAAAAAAACCCGCTGAAATATCCGCATATGTTTG < 1:9115174/34‑1 gAAAAAAAACCCGCTGAAATATCCGCATATGTTTG < 1:15748421/34‑1 AAAAGAAAACCCGCTGAAATATCCGCATATGTTTG < 1:923192/35‑1 AAAAAAAAACCCGCTGAAATATCCGCATATGTTTG < 1:8477470/35‑1 AAAGAAAACCCGCTGAAATATCCGCATATGTTTGC < 1:10124959/35‑1 AAAAAAAACCCGCTGAAATATCCGCATATGTTTGC < 1:5658159/35‑1 AAAAAAAAACCGCTGAAATATCCGCATATGTTTGC < 1:1211896/35‑1 AAAAAAACCCGCTGAAATATCCGCATATGTTTGCC < 1:5565390/35‑1 AAAAAAACCCGCTGAAATATCCGCATATGTTTGCC < 1:12025664/35‑1 AAAAAAACCCGCTGAAATATCCGCATATGTTTGCC < 1:2040775/35‑1 AAAAAACCCGCTGAAATATCCGCATATGTTTGCCG < 1:10609030/35‑1 AAAAAACCCGCTGAAATATCCGCATATGTTTGCCG < 1:20088637/35‑1 AAAAACCCGCTGAAATATCCGCATATGTTTGCCGC < 1:14588622/35‑1 AAAAACCCGCTGAAATATCCGCATATGTTTGCCGC < 1:4296574/35‑1 AAAAACCCGCTGAAATATCCGCATATGTTTGCCGC < 1:16216074/35‑1 AAAAAACCGCTGAAATATCCGCATATGTTTGCCGC < 1:20322690/35‑1 AAAACCCGCTAAAATATCCGCATATGTTTGCCGCC < 1:17338986/35‑1 CCCGCTGAAATATCCGCATATGTTTGCCGCCGCCT < 1:13043662/35‑1 CCCGCTGAAATATCCGCATATGTTTGCCGCCGCCT < 1:12717486/35‑1 CCCGCTGAAATATCCGCATATGTTTGCCGCCGCCT < 1:1508468/35‑1 CCGTTGAAATATCCGCATATGTTTGCCGCCGCCTC < 1:14931991/35‑1 CCGCTGAAATATCCGCATATGTTTGCCGCCGCCTC > 1:5156752/1‑35 CCGCTGAAATATCCGCATATGTTTGCCGCCGCCTC < 1:4089930/35‑1 CCGCTGAAATATCCGCATATGTTTGCCGCCGCCTC > 1:17040267/1‑35 CGCTGAAATATCCGCATATGTTTGCCGCCGCCTCG > 1:16343230/1‑35 CGCTGAAATATCCGCATATGTTTGCCGCCGCCTCG > 1:14003968/1‑35 CGCTGAAATATCCGCATATGTTTGCCGCCGCCTCG > 1:7177549/1‑35 CGCTGAAATATCCGCATATGTTTGCCGCCGCCTCG > 1:3225589/1‑35 CGCTAAAATATCCGCATATGTTTGCCGCCGCCTCG < 1:5835279/35‑1 CGCTAAAATATCCGCATATGTTTGCCGCCGCCTCG > 1:20160988/1‑35 GCTGATATATCCGCATATGTTTGCCGCCGCCTCGC > 1:1392522/1‑35 GCTGAAATATCCGCATATGTTTGCCGCCGCCTCGC > 1:1992585/1‑35 GCTGAAATATCCGCATATGTTTGCCGCCGCCTCGC < 1:3896212/35‑1 GCTGAAATATCCGCATATGTTTGCCGCCGCCTCGC > 1:2918394/1‑35 GCTGAAATATCCGCATATGTTTGCCGCCGCCTCGC > 1:20584333/1‑35 GCTGAAATATCCGCATATGTTTGCCGCCGCCTCGC > 1:18837714/1‑35 ctaAAATATCCGCATATGTTTGCCGCCGCCTCGCT < 1:16449326/32‑1 CTGAAATATCCGCATATGTTTGCCGCCGCCTCGCT > 1:19874877/1‑35 CTGAAATATCCGCATATGTTTGCCGCCGCCTCGCT < 1:17586402/35‑1 CTGAAATATCCGCATATGTTTGCCGCCGCCTCGCT > 1:8692796/1‑35 taAAATATCCGCATATGTTTGCCGCCGCCTCGCTG < 1:4246639/33‑1 gaAAATATCCGCATATGTTTGCCGCCGCCTCGCTG < 1:13323487/33‑1 TGAATTATCCGCATATGTTTGCCGCCGCCTCGCTG < 1:6942165/35‑1 TGAAATATCCGCATATGTTTGGCGCCGCCTCGCTG > 1:6603027/1‑35 TGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG > 1:4354737/1‑35 TGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG > 1:13972445/1‑35 TGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG < 1:6436837/35‑1 TGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG > 1:13635006/1‑35 TGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG > 1:13581892/1‑35 TGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG > 1:7138718/1‑35 TGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG > 1:4141922/1‑35 TGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG > 1:19819794/1‑35 TGAAATATCCGCATATGTTTGCCGCCGCCTCGCTG < 1:3704577/35‑1 TGAAATATCCGCATATGTTTGCCGCCGCCTCCCTG > 1:19776058/1‑35 aAAATATCCGCATATGTTTGCCGCCGCCTCGCTGA < 1:5423459/34‑1 aAAATATCCGCATATGTTTGCAGCCGCCTCGCTGA < 1:11126324/34‑1 aAAATACCCGCATATGTTTGCCGCCGCCTCGCTGA < 1:84256/34‑1 GAAATATCCGCATATGTTTGCCGCCGCCTCGCTGA > 1:9467842/1‑35 GAAATATCCGCATATGTTTGCCGCCGCCTCGCTGA > 1:7358147/1‑35 GAAATATCCGCATATGTTTGCCGCCGCCTCGCTGA > 1:14661672/1‑35 GAAATATCCGCATATGTTTGCCGCCGCCTCGCTGA > 1:4506377/1‑35 GAAATATCCGCATATGTTTGCCGCCGCCTCGCTGA > 1:16730929/1‑35 GAAATATCCGCATATGTTTGCCGCCGCCTCGCTGA > 1:16910309/1‑35 GAAATATCCGCATATGTTTGCCGCCGCCTCGCTGA > 1:17395814/1‑35 AAATATCCGCATATGTTTGCCGCCGCCTCGCTGAT > 1:13047306/1‑35 AAATATCCGCATATGTTTGCCGCCGCCTCGCTGAT > 1:7913559/1‑35 AAATATCCGCATATGTTTGCCGCCGCCTCGCTGAT < 1:4807778/35‑1 AAATATCCGCATATGTTTGCCGCCGCCTCGCTGAT < 1:3808837/35‑1 AAATATCCGCATATGTTTGCCGCCGCCTCGCTGAT > 1:9608696/1‑35 AAATATCCGCATATGTTTGCCGCCGCCTCGCTGAT > 1:18105474/1‑35 GGCCTCAACCGCACACTAAAGACCAAAAAAAAACCCGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/640155‑640115 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctgaAATATCCGCATATGTTTGCCGCCGCCTCGCTGAT > REL606/2746531‑2746564 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |