New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3483684 = | 62 (0.600) | 11 (0.140) | 5/36 | NT | 15.9% | coding (2000/2706 nt) | malT | transcriptional regulator MalT |
? | REL606 | = 3677027 | 70 (0.910) | coding (478/987 nt) | yiaO | predicted transporter |
Only 100 of 167 total aligned reads displayed.
CGATGTCACCAACTCGCGCGCACCGGTTAAAACCCCCGCCGACCTGAAAGGGCTGAAAATCCGCACCAA > REL606/3676993‑3677061 | cgATGTCACCAACTCGCGCGCACCGGTTAAAAccc < 1:2301868/35‑1 (MQ=255) cgATGTCACCAACTCGCGCGCACCGGTTAAAAccc > 1:18826535/1‑35 (MQ=255) cgATGTCACCAACTCGCGCGCACCGGTTAAAAccc < 1:5270517/35‑1 (MQ=255) cgATGTCACCAACTCGCGCGCACCGGTTAAAAccc > 1:8584225/1‑35 (MQ=255) gATGTCACCAACTCGCGCGCACCGGTTAAAACCCc < 1:14999907‑M2/35‑2 (MQ=255) aTGTCCCCAACTCGCGCGCACCGGTTAAAACCCcc > 1:12579550‑M2/1‑33 (MQ=255) aTGTCACCAACTCGCGCGCACCGGTTAAAACCCcc < 1:19071302‑M2/35‑3 (MQ=255) tGTCACCAACTCGCTCGCACCGGTTAAAACCCccg < 1:17529718‑M2/35‑4 (MQ=255) tGTCACCAACTCGCGCGCACCGGTTAAAACCCccg > 1:14624145‑M2/1‑32 (MQ=255) gTCACCAACTCGCGCGCACCGGTTAAAACCCccgc < 1:10306367‑M2/35‑5 (MQ=255) tCACCAACTCGCGCGCACCGGTTAAAACCCccgcc < 1:6087948‑M2/35‑6 (MQ=255) cACCAACTCGCGCGCACCGGTTAAAACCCccgccg < 1:10345779‑M2/35‑7 (MQ=255) cACCAACTCGCGCGCACCGGTTAAAACCCccgccg < 1:11596080‑M2/35‑7 (MQ=255) cACCAACTCGCGCGCACCGGTTAAAACCCccgccg < 1:3545071‑M2/35‑7 (MQ=255) aCCAACTCGCGCGCACCGGTTAAAACCCCCGCCGa > 1:15068988/1‑35 (MQ=255) ccAACTCGCGCGCACCGGTTAAAACCCCCGCCGAc > 1:10732666/1‑35 (MQ=255) ccAACTCGCGCGCACCGGTTAAAACCCCCGCCGAc > 1:10107791/1‑35 (MQ=255) cAACTCGCGCGCACCGGTTAAAACCCCCGCCGAcc > 1:16137600/1‑35 (MQ=255) cAACTCGCGCGCACCGGTTAAAACCCCCGCCGAcc > 1:13125276/1‑35 (MQ=255) aCTCGCGCGCACCGGTTAAAACCCCCGCCGCCCTg > 1:6918288/1‑35 (MQ=255) aCTCGCGCGCACCGGTTAAAACCCCCGCCGACCTg > 1:17369020/1‑35 (MQ=255) cTCGCGCGCACCGGTTAAAACCCCCGCCGACCTGa > 1:5093974/1‑35 (MQ=255) tCGCGCGCACCGGTTAAAACCCCCGCCGACCTGaa > 1:3266839/1‑35 (MQ=255) tCGCGCGCACCGGTTAAAACCCCCGCCGACCTGaa > 1:16736114/1‑35 (MQ=255) cgcgcgCACCGGTTAAAACCCCCGCCGACCTGaaa < 1:16611219/35‑1 (MQ=255) cgcgcACCGGTTAAAACCCCCGCCGACCTGAAAgg > 1:11127960/1‑35 (MQ=255) gcgcACCGGTTAAACCCCCCGCCGACCTGAAAggg < 1:15806027/35‑1 (MQ=255) gcgcACCGGTTAAAACCCCCGCCGACCTGAAAggg < 1:1975520/35‑1 (MQ=255) gcgcACCGGTTAAAACCCCCGCCGACCTGAAAggg > 1:12286677/1‑35 (MQ=255) gcgcACCGGTTAAAACCCCCGCCGACCTGAAAggg < 1:3990888/35‑1 (MQ=255) cgcACCGGTTAAAACCCCCGCCGACCTGAAAGGGc > 1:18001246/1‑35 (MQ=255) cgcACCGGTTAAAACCCCCGCCGACCTGAAAGGGc > 1:4525361/1‑35 (MQ=255) cgcACCGGTAAAACCCCCCGCCGACCTGAAAGGGc < 1:10067485/35‑1 (MQ=37) gcACCGGTTAAACCCCCCGCCGACCTGAAAGGGCt < 1:1471564/35‑1 (MQ=255) gcACCGGTTAAAACCCCCGCCGACCTGAAAGGGCt > 1:5819944/1‑35 (MQ=255) cACGGGTAAAACCCCCCGCCGACCTGAAAGGGCTg < 1:447816/35‑1 (MQ=25) cACCGGTTAAAACCCCCGCCGACCTGAAAGGGCTg > 1:1544147/1‑35 (MQ=255) aCCGGTTAAACCCCCCGCCGACCTGAAAGGGCTGa < 1:5737246/35‑1 (MQ=255) aCCGGTAAAACCCCCCGCCGACCTGAAAGGGCTGa < 1:20573812/35‑1 (MQ=37) ccGGTTAAAACCCCCGCCGACCTGAAAGGGCTGaa < 1:16403292/35‑1 (MQ=255) ccGGTTAAAACCCCCGCCGACCTGAAAGGGCTGaa > 1:17261538/1‑35 (MQ=255) ccGGTTAAAACCCCCGCCGACCTGAAAGGGCTGaa > 1:17284558/1‑35 (MQ=255) gggTTAAACCCCCCGCCGACCTGAAAGGGCTGaaa < 1:13018469/34‑1 (MQ=255) cgattAAACCCCCCGCCGACCTGAAAGGGCTGaaa < 1:1314518/32‑1 (MQ=37) cGGTTAAACCCCCCGCCGACCTGAAAGGGCTGaaa < 1:9843632/35‑1 (MQ=255) cGGTTAAAACCCCCGCCGACCTGAAAGGGCTGaaa > 1:11232324/1‑35 (MQ=255) cGGTTAAAACCCCCGCCGACCTGAAAGGGCTGaaa > 1:4850166/1‑35 (MQ=255) cGGTTAAAACCCCCGCCGACCTGAAAGGGCTGaaa > 1:7559408/1‑35 (MQ=255) cGGTTAAAACCCCCGCCGACCTGAAAGGGCTGaaa > 1:9669618/1‑35 (MQ=255) aggTTAAACCCCCCGCCGACCTGAAAGGGCTGaaa < 1:13824320/34‑1 (MQ=255) ggTTAAAACCCCCGCCGACCTGAAAGGGCTGaaaa > 1:5865016/1‑35 (MQ=255) ggTTAAAACCCCCGCCGACCTGAAAGGGCTGaaaa > 1:18823441/1‑35 (MQ=255) ggTTAAAACCCCCGCCGACCTGAAAGGGCTGaaaa > 1:13915508/1‑35 (MQ=255) ggTTAAAACCCCCGCCGACCTGAAAGGGCTGaaaa > 1:13608941/1‑35 (MQ=255) ggTTAAAAACCccgccgctgccaactggttgcgtc > 1:2638936‑M2/1‑11 (MQ=255) ttaaaacCCCCCGCCGACCTGAAAAGGCTGAAAAt < 1:8743302/32‑1 (MQ=25) gTTAAAACCCccgccgctgccaactggttgcgtca > 1:3038184‑M2/1‑10 (MQ=255) gTTAAAACCCCCGCCGACCTGAAAGGGCTGAAAAt > 1:2078395/1‑35 (MQ=255) ttAAAACCCCCGCCGACCTGAAAGTGCTGAAAATc > 1:15566804/1‑35 (MQ=255) ttAAAACCCCCGCCGACCTGAAAGGGCTGAAAATc < 1:11652506/35‑1 (MQ=255) tgaaaaccCccgccgctgccaactggttgcgtcat > 1:3864093‑M2/3‑9 (MQ=255) gtaAAACCCccgccgctgccaactggttgcgtcat > 1:11025177‑M2/2‑9 (MQ=255) tAAAACCCcagccgctgccaactggttgcgtcata > 1:4886519‑M2/1‑8 (MQ=255) tAAAACCCCCGCCGACCTGAAAGGGCTGAAAATcc > 1:16226144/1‑35 (MQ=255) tAAAACCCCCGCCGACCTGAAAGGGCTGAAAATcc > 1:377723/1‑35 (MQ=255) aaaacCCCCCGCCGACCTGAAAGGGCTGAAAATcc < 1:7600138/34‑1 (MQ=255) gacacccccgccgctgccaactggttgcgtcatac > 1:9061215‑M2/4‑7 (MQ=255) aacaCCCccgccgctgccaactggttgcgtcatac > 1:16284933‑M2/1‑7 (MQ=255) aaacCCCCCGCCGACCTGAAAGGGCTGAAAATCCg < 1:11942725/35‑1 (MQ=255) aaacCCCCCGCCGACCTGAAAGGGCTGAAAATCCg < 1:13962380/35‑1 (MQ=255) aaaaCCCccgccgctgccaactggttgcgtcatac > 1:3680537‑M2/1‑7 (MQ=255) aaaaCCCccgccgctgccaactggttgcgtcatac > 1:12166284‑M2/1‑7 (MQ=255) aaaaCCCCCGCCGACCTGAAAGGGCTGAAAATCCg > 1:7439999/1‑35 (MQ=255) aaaaCCCCCGCCGACCTGAAAGGGCTGAAAATCCg > 1:14470655/1‑35 (MQ=255) aaaaCCCCCGCCGACCTGAAAGGGCTGAAAATCCg > 1:13435790/1‑35 (MQ=255) aaaaCCCCCGCCGACCTGAAAGGGCTGAAAATCCg > 1:20383636/1‑35 (MQ=255) tgaccCccgccgctgccaactggttgcgtcatacg > 1:616238‑M2/3‑6 (MQ=255) aaaCCCccgccgctgccaactggttgcgtcatacg > 1:17509334‑M2/1‑6 (MQ=255) aaaCCCCCGCCGACCTGAAAGGGCTGAAAATCCGc > 1:17878345/1‑35 (MQ=255) aaaCCCCCGCCGACCTGAAAGGGCTGAAAATCCGc > 1:19562792/1‑35 (MQ=255) cacCCccgccgctgccaactggttgcgtcatacgg > 1:19824252‑M2/2‑5 (MQ=255) aaCCCCCGCCGACCTGAAAGGGCTGAAAATCCGCa > 1:7932883/1‑35 (MQ=255) aaACCccgccgctgccaactggttgcgtcatacgg > 1:7639492‑M2/1‑5 (MQ=255) ccccccGCCGACCTGAAAGGGCTGAAAATCCGCAc < 1:14632783/34‑1 (MQ=255) aCCCccgccgctgccaactggttgcgtcatacggc > 1:6398681‑M2/1‑4 (MQ=255) aCCCCCGCCGACCTGAAAGGGCTGAAAATCCGCAc > 1:2372862/1‑35 (MQ=255) cccccgccgctgccaactggttgcgtcatacggct > 1:813578‑M2/1‑3 (MQ=255) cccccGCCGACCTGAAAGGGCTGAAAATCCGCAcc < 1:9120480/35‑1 (MQ=255) cccccGCCGACCTGAAAGGGCTGAAAATCCGCAcc < 1:6357855/35‑1 (MQ=255) ccccgccgctgccaactggttgcgtcatacggcta > 1:780707‑M2/1‑2 (MQ=255) ccccGCCGACGTGAAAGGGCTGAAAATCCGCACca < 1:7260571/35‑1 (MQ=255) ccccGCCGACCTGAAAGGGCTGAAAATCCGCACca < 1:4760890/35‑1 (MQ=255) ccccGCCGACCTGAAAGGGCTGAAAATCCGCACca < 1:6082381/35‑1 (MQ=255) ccccGCCGACCTGAAAGGGCTGAAAATCCGCACca < 1:8274422/35‑1 (MQ=255) ccccGCCGACCTGAAAGGGCTGAAAATCAGCACca < 1:17206065/35‑1 (MQ=255) ccccACCGACCTGAAAGGGCTGAAAATCCGCACca < 1:18183456/35‑1 (MQ=255) cccgccgctgccaactggttgcgtcatacggctaa > 1:20066823‑M2/1‑1 (MQ=255) cccgccgctgccaactggttgcgtcatacggctaa > 1:1806318‑M2/1‑1 (MQ=255) cccGCCGACCTGAAAGGGCTGAAAATCCGCACcaa < 1:8897488/35‑1 (MQ=255) cccGCCGACCTGAAAGGGCTGAAAATCCGCACcaa > 1:11272181/1‑35 (MQ=255) | CGATGTCACCAACTCGCGCGCACCGGTTAAAACCCCCGCCGACCTGAAAGGGCTGAAAATCCGCACCAA > REL606/3676993‑3677061 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |