New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2981401 | 48 (0.470) | 13 (0.170) | 5/36 | NT | 15.6% | coding (553/705 nt) | yggS | predicted enzyme |
? | REL606 | 3882315 = | 105 (1.360) | coding (103/816 nt) | atpB | F0F1 ATP synthase subunit A |
GAATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTG‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2981362‑2981401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgGGGGGTTTTGTG > REL606/3882315‑3882326 GAATATGTAAGGCAGTTTGAAGTTGCACGCCAAAT > 1:17949382/1‑35 GAATATGTAAGGCAGTTTGAAGTTGCACGCCAAAT < 1:19908427/35‑1 GAATATGTAAGGCAGTTTGAAGTTGCACGCCAAAT > 1:8040717/1‑35 GAATATGTAAGGCAGTTTGAAGTTGCACGCCAAAT > 1:11645589/1‑35 GAATATGTAAGGCAGTTTGAAGTTGCACGCCAAAT < 1:6847765/35‑1 AATATGTAAGGCAGTTTGAAGTTGCACGCCAAATG > 1:11851869/1‑35 ATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGG > 1:19878140/1‑35 ATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGG > 1:16158008/1‑35 ATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGG > 1:2913868/1‑35 ATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGG > 1:4539450/1‑35 ATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGG > 1:12749764/1‑35 ATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGG > 1:12637612/1‑35 ATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGG < 1:6547361/35‑1 ATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGG > 1:12240813/1‑35 ATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGG < 1:7660781/35‑1 ATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGG < 1:8595333/35‑1 ATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGG > 1:10048638/1‑35 TATGTAAGGCAGTTTGAAGTTGCACGCCAAATGGC < 1:2217584/35‑1 TATGTAAGGCAGTTTGAAGTTGCACGCCAAATGGC < 1:9182945/35‑1 ATGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCT < 1:5120129/35‑1 ATGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCT < 1:9757497/35‑1 ATGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCT < 1:19858617/35‑1 ATGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCT > 1:19462937/1‑35 TGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTG < 1:10906589/35‑1 TGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTG < 1:15712929/35‑1 TGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTG < 1:12199610/35‑1 TGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTG > 1:12275016/1‑35 GTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGG > 1:9618957/1‑35 GTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGG > 1:18351706/1‑35 GTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGG > 1:8228982/1‑35 AAGGCAGTTTGAAGTTGCACGCCAAATGGCTGGGG > 1:3045813/1‑35 AAGGCAGTTTGAAGTTGCACGCCAAATGGCTGGGG > 1:7053938/1‑35 AAGGCAGTTTGAAGTTGCACGCCAAATGGCTGGGG > 1:15692720/1‑35 AGGCAGTTTGAAGTTGCACGCCAAATGGCTGGGGG > 1:17873156/1‑35 AGGCAGTTTGAAGTTGCACGCCAAATGGCTGGGGG > 1:1597008/1‑35 GCAGTTTGAAGTTGCACGCCAAATGGCTGGGGGGg > 1:9435547/1‑34 GCAGTTTGAAGTTGCACGCCAAATGGCTGGGGGGg > 1:8013564/1‑34 CAGTTTGAAGTTGCACGCCAAATGGCTGGGGGGgt > 1:10205804/1‑33 CAGTTTGAAGTTGCACGCCAAATGGCTGGGGGGgt > 1:18458634/1‑33 CAGTTTGAAGTTGCACGCCAAATGGCTGGGGGGct > 1:10276653/1‑33 CAGTTTGAAGTTGCACGCCAAATGGCTGGGGGGTT > 1:3783487/1‑35 CAGTTTGAAGTTGCACGCCAAATGGCTGGGGGGTT > 1:15921627/1‑35 CAGTTTGAAGTTGCACGCCAAATGGCTGGGGGGTT > 1:18888665/1‑35 AGTTTGAAGTTGCACGCCAAATGGCTGGGGGGTgt > 1:4629848/1‑33 AGTTTGAAGTTGCACGCCAAATGGCTGGGGGGTTT > 1:15471985/1‑35 AGTTTGAAGTTGCACGCCAAATGGCTGGGGGGGTT > 1:11617320/1‑35 AGTTTGAAGTTGCACGCCAAATGGCTGGGGGGGTT > 1:176799/1‑35 GTTTGAAGTTGCACGCCAAATGGCTGGGGGGGTTg > 1:8515318/1‑34 GTTTGAAGTTGCACGCCAAATGGCTGGGGGGGTTT > 1:9556537/1‑35 GTTTGAAGTTGCACGCCAAATGGCTGGGGGATTTg > 1:8652427/1‑34 TTTGAAGTTGCACGCCAAATGGCTGGGGGGTTTTG > 1:11584827/1‑35 TTTGAAGTTGCACGCCAAATGGCTGGGGGGGTTTt > 1:2631182/1‑34 TGAAGTTGCACGCCAAATGGCTGGGGGGGTTTGTG > 1:3808703/1‑35 GAATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTG‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2981362‑2981401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgGGGGGTTTTGTG > REL606/3882315‑3882326 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |