New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2377427 =84 (0.820)11 (0.120) 6/42 NT 16.1% coding (92/915 nt) accD acetyl‑CoA carboxylase subunit beta
?REL606 3367495 = 41 (0.460)intergenic (‑81/+26) yhdN/rplQ hypothetical protein/50S ribosomal protein L17

TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2377463‑2377427
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTG  >  REL606/3367495‑3367528
                                                                       
TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGC                                      <  1:9682552/35‑1
TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGC                                      >  1:5481479/1‑35
TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGC                                      <  1:2115895/35‑1
TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGC                                      >  1:1927067/1‑35
TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGC                                      <  1:17415386/35‑1
TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGC                                      <  1:16727055/35‑1
 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTTCG                                     >  1:397138/1‑35
 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG                                     <  1:7420583/35‑1
 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG                                     <  1:4366271/35‑1
 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG                                     <  1:3759257/35‑1
 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG                                     <  1:3377414/35‑1
 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG                                     >  1:19024293/1‑35
 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG                                     <  1:18008914/35‑1
 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG                                     >  1:17544006/1‑35
 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG                                     <  1:17480375/35‑1
  CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG                                    >  1:7951529/1‑35
  CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG                                    <  1:17284911/35‑1
  CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG                                    >  1:9154888/1‑35
  CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG                                    >  1:16346528/1‑35
  CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG                                    <  1:641646/35‑1
  CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG                                    >  1:14172894/1‑35
  CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG                                    <  1:17776412/35‑1
  CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG                                    >  1:20546010/1‑35
  CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG                                    <  1:20243951/35‑1
   CTGAATGGGTGTGGACTAAGTGTGATAGCTGCGGG                                   >  1:15307373/1‑35
   CTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGGG                                   >  1:17650155/1‑35
   CTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGGG                                   >  1:13378706/1‑35
    TGAAGGGGTGTGGACTAAGTGTGATAGCTGCGGGc                                  >  1:15785729/1‑34
    TGAAGGGGTGTGGACTAAGTGTGATAGCTGCGGGG                                  >  1:19639994/1‑35
     GAAGGGGTGTGGACTAAGTGTGATAGCTGCGGGtc                                 >  1:154067/1‑33
     GAAGGGGTGTGGACTAAGTGTGATAGCTGCGGGGa                                 >  1:960621/1‑34
     GAAGGGGTGTGGACTAAGTGTGATAGCTGCGGGGa                                 >  1:5047131/1‑34
      AAGGGGTGTGGACTAAGTGTGATAGCTGCGGGcgg                                >  1:1341177/1‑32
      AAGGGGTGTGGACTAAGTGTGATAGCTGCGGGCCG                                >  1:1774825/1‑35
        GGGGTGTGGACTAAGTGTGATAGCTGCGGGGGGGG                              >  1:4769571/1‑35
          GGTGTGGACTAAGTGTGATAGCTGCGGGGAGGGTT                            >  1:7158767/1‑35
          GGTGTGGACTAAGTGTGATAGCTGCGGGGAGGGTT                            >  1:16132828/1‑35
           GTGTGGACTAAGTGTGATAGCTGCGGGGGGGGTTT                           >  1:6111191/1‑35
           GTGTGGACTAAGTGTGATAGCTGCGGGGGGGGTTT                           >  1:16525521/1‑35
           GTGTGGACTAAGTGTGATAGCTGCGGGGAGGGTTT                           >  1:16043175/1‑35
            TGTGGACTAAGTGTGATAGCTGCGGGGCGGGTTTT                          >  1:1390425/1‑35
            TGTGGACTAAGTGTGATAGCTGCGGGGAGGGTTTT                          >  1:12183143/1‑35
             GTGGACTAAGTGTGATAGCTGCGGGGTGGGTTTTT                         >  1:15294299/1‑35
              TGGACTAAGTGTGATAGCTGCGGGGTGGGTTTTTa                        >  1:19179028/1‑34
              TGGACTAAGTGTGATAGCTGCGGGGCGGGTTTTTT                        >  1:2572033/1‑35
                                    GGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTG  <  1:11691360/35‑1
                                    GGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTG  >  1:6860370/1‑35
                                    GGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTG  >  1:16674867/1‑35
                                    GGGCGGGTTTTTTTACGTTGATTCAGATTACTCTG  <  1:769407/35‑1
                                                                       
TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2377463‑2377427
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTG  >  REL606/3367495‑3367528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.