Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 4,110,237 | IS150 (–) +3 bp | 100% | coding (296‑298/2433 nt) | metL → | bifunctional aspartate kinase II/homoserine dehydrogenase II |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3893554 = | NA (NA) | 139 (1.480) | 43/44 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 4110237 = | 0 (0.000) | coding (296/2433 nt) | metL | bifunctional aspartate kinase II/homoserine dehydrogenase II | |||||
* | ? | REL606 | = 3894996 | NA (NA) | 79 (0.770) | 28/48 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 4110239 | 0 (0.000) | coding (298/2433 nt) | metL | bifunctional aspartate kinase II/homoserine dehydrogenase II |
Only 100 of 350 total aligned reads displayed.
TCTGCTACCCGCTGAAGAAGCCGATAGCCTCATTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGCGGC > REL606/4110205‑4110273 | atttcatcgtccaacaaaatgggtgcagtacaTTa > 1:3268994‑M2/33‑35 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaTTa < 1:19709554‑M2/3‑1 (MQ=255) tttcatcgtccaacaaaatgggtgcagtgcaTTAg < 1:20318231‑M2/4‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTAgc > 1:16253357‑M2/31‑35 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTAgc < 1:17983601‑M2/5‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTAgc < 1:19901986‑M2/5‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTAgc < 1:19822446‑M2/5‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaCTaga > 1:13266848‑M2/31‑34 (MQ=255) tGCTACCCGCTGAAGAAGCCGATAGCCTCATTAtg < 1:1610938‑M2/35‑3 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaTTAgcg < 1:6759626‑M2/6‑1 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaTTAgcg < 1:569383‑M2/6‑1 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaTTAgcg < 1:12446919‑M2/6‑1 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaTTAgcg < 1:17905722‑M2/6‑1 (MQ=255) catcgtccaacaaaatgggtgcagtacaTTAgcgc > 1:7252299‑M2/29‑35 (MQ=255) catcgtccaacaaaatgggtgcagtacaTTAgcgc > 1:6420449‑M2/29‑35 (MQ=255) catcgtccaacaaaatgggtgcagtacaTTAgcgc < 1:7996399‑M2/7‑1 (MQ=255) cTACCCGCTGAAGAAGCCGATAGCCTCATTAtgta < 1:5040129‑M2/35‑5 (MQ=255) atcgtccaacaaaatgggtgcagtacaTTAGCGCt < 1:18814492‑M2/8‑1 (MQ=255) atcgtccaacaaaatgggtgcagtacaTTAGCGCt < 1:9817614‑M2/8‑1 (MQ=255) tcgtccaacaaaatgggtgcagtacaTTAGCGCtt > 1:14555206‑M2/27‑35 (MQ=255) tcgtccaacaaaatgggtgcagtacaTTAGCGCtt < 1:16844177‑M2/9‑1 (MQ=255) aCCCGCTGAAGAAGCCGATAGCCTCATTAtgtaat < 1:7848991‑M2/35‑7 (MQ=255) cgtccaacaaaatgggtgcagtacaTTAGCGCttt < 1:9343685‑M2/10‑1 (MQ=255) cccGCTGAAGAAGCCGATAGCCTCATTAtgtactg < 1:4525125‑M2/35‑8 (MQ=255) gtccaacaaaatgggtgcagtacaTTAGCGCtttt < 1:10938460‑M2/11‑1 (MQ=255) gtccaacaaaatgggtgcagtacaTTAGCGCtttt < 1:9201143‑M2/11‑1 (MQ=255) gCTGAAGAAGCCGATAGCCTCATTAtgtactgacc < 1:3767650‑M2/35‑11 (MQ=255) gCTGAAGAAGCCGATAGCCTCATTAtgtactgacc < 1:1280119‑M2/35‑11 (MQ=255) ccaacaaaatgggtgcagtacaTTAGCGCTTTTGt < 1:310928‑M2/13‑1 (MQ=255) ccaacaaaatgggtgcagtacaTTAGCGCTTTTGt < 1:11780185‑M2/13‑1 (MQ=255) ccaacaaaatgggtgcagtacaTTAGCGCTTTTGt > 1:10598415‑M2/23‑35 (MQ=255) aacaaaatgggtgcagtacaTTAGCGCTTTTGTCa < 1:20112862‑M2/15‑1 (MQ=255) aacaaaatgggtgcagtacaTTAGCGCTTTTGTCa > 1:9254554‑M2/21‑35 (MQ=255) aacaaaatgggtgcagtacaTTAGCGCTTTTGTCa < 1:11510228‑M2/15‑1 (MQ=255) aacaaaatgggtgcagtacaTTAGCGCTTTTGTCa > 1:10016796‑M2/21‑35 (MQ=255) acaaaatgggtgcagtacaTTAGCGCTTTTGTCAg > 1:9626126‑M2/20‑35 (MQ=255) caaaatgggtgcagtacaTTAGCGCTTTTGTCAGc < 1:1659678‑M2/17‑1 (MQ=255) caaaatgggtgcagtacaTTAGCGCTTTTGTCAGc < 1:10760017‑M2/17‑1 (MQ=255) caaaatgggtgcagtacaTTAGCGCTTTTGTCAGc < 1:17429776‑M2/17‑1 (MQ=255) aagaagCCGATAGCCTCATTAtgtactgaccccaa < 1:10396128‑M2/35‑15 (MQ=255) agaagCCGATAGCCTCATTAtgtactgaccccaaa < 1:18727009‑M2/35‑16 (MQ=255) aaaatgggtgcagtacaTTAGCGCTTTTGTCAGCg > 1:12033822‑M2/18‑35 (MQ=255) aaaatgggtgcagtacaTTAGCGCTTTTGTCAGCg > 1:14758594‑M2/18‑35 (MQ=255) gaagCCGATAGCCTCATTAtgtactgaccccaaaa < 1:11278868‑M2/35‑17 (MQ=255) gaagCCGATAGCCTCATTAtgtactgaccccaaaa < 1:4325785‑M2/35‑17 (MQ=255) aaatgggtgcagtacaTTAGCGCTTTTGTCAGCGa < 1:15433026‑M2/19‑1 (MQ=255) aaatgggtgcagtacaTTAGCGCTTTTGTCAGCGa > 1:19394638‑M2/17‑35 (MQ=255) aatgggtgcagtacaTTAGCGCTTTTGTCAGCGAt < 1:5621057‑M2/20‑1 (MQ=255) aatgggtgcagtacaTTAGCGCTTTTGTCAGCGAt < 1:17720839‑M2/20‑1 (MQ=255) aagCCGATATCCTCATTAtgtactgaccccaaaaa < 1:9555885‑M2/35‑18 (MQ=255) atgggtgcagtacaTTAGCGCTTTTGTCAGCGATc > 1:15620009‑M2/15‑35 (MQ=255) agCCGATAGCCTCATTAtgtactgaccccaaaaag < 1:16401521‑M2/35‑19 (MQ=255) agCCGATAGCCTCATTAtgtactgaccccaaaaag < 1:11166860‑M2/35‑19 (MQ=255) tgggtgcagtacaTTAGCGCTTTTGTCAGCGATCt > 1:18371490‑M2/14‑35 (MQ=255) tgggtgcagtacaTTAGCGCTTTTGTCAGCGATCt < 1:14297754‑M2/22‑1 (MQ=255) gCCGATAGCCTCATTAtgtactgaccccaaaaagt < 1:19375134‑M2/35‑20 (MQ=255) gggtgcagtacaTTAGCGCTTTTGTCAGCGATCTg < 1:10487392‑M2/23‑1 (MQ=255) gggtgcagtacaTTAGCGCTTTTGTCAGCGATCTg < 1:17664621‑M2/23‑1 (MQ=255) gggtgcagtacaTTAGCGCTTTTGTCAGCGATCTg < 1:4055854‑M2/23‑1 (MQ=255) gggtgcagtacaTTAGCGCTTTTGTCAGCGATCTg > 1:386052‑M2/13‑35 (MQ=255) cGATAGCCTCATTAtgtactgaccccaaaaagttg < 1:17121617‑M2/35‑22 (MQ=255) cGATAGCCTCATTAtgtactgaccccaaaaagttg > 1:135739‑M2/1‑14 (MQ=255) nngcagnacaTTAGCGCTTTTGTCAGCGATCTGGa < 1:8854100‑M2/25‑1 (MQ=255) ttaGCCTCATTAtgtactgaccccaaaaagttgga > 1:7731823‑M2/2‑12 (MQ=255) tgcagtacaTTAGCGCTTTTGTCAGCGATCTGGaa < 1:7566075‑M2/26‑1 (MQ=255) tgcagtacaTTAGCGCTTTTGTCAGCGATCTGGaa > 1:10647483‑M2/10‑35 (MQ=255) tgcagtacaTTAGCGCTTTTGTCAGCGATCTGGaa > 1:12976370‑M2/10‑35 (MQ=255) tgcagtacaTTAGCGCTTTTGTCAGCGATCTGGaa < 1:2374365‑M2/26‑1 (MQ=255) tAGCCTCATTAtgtactgaccccaaaaagttggac > 1:3478333‑M2/1‑11 (MQ=255) tAGCCTCATTAtgtactgaccccaaaaagttggac < 1:17009835‑M2/35‑25 (MQ=255) tAGCCTCATTAtgtactgaccccaaaaagttggac < 1:15030884‑M2/35‑25 (MQ=255) gcagtacaTTAGCGCTTTTGTCAGCGATCTGGAAc > 1:15148205‑M2/9‑35 (MQ=255) cagtacaTTAGCGCTTTTGTCAGCGATCTGGAACg < 1:10201347‑M2/28‑1 (MQ=255) gCCTCATTAtgtactgaccccaaaaagttggacag > 1:19513236‑M2/1‑9 (MQ=255) gCCTCATTAtgtactgacaccaaaaagttggacag > 1:20378069‑M2/1‑9 (MQ=255) gtacaTTAGCGCTTTTGTCAGCGATCTGGAACGcc < 1:18204372‑M2/30‑1 (MQ=255) tacaTTAGCGCTTTTGTCAGCGATCTGGAACTCCt > 1:8664367‑M2/5‑35 (MQ=255) tacaTTAGCGCTTTTGTCAGCGATCTGGAACGCCt < 1:141754‑M2/31‑1 (MQ=255) acaTTAGCGCTTTTGTCAGCGATCTGGAACGCCTg < 1:3565239‑M2/32‑1 (MQ=255) acaTTAGCGCTTTTGTCAGCGATCTGGAACGCCTg > 1:8235257‑M2/4‑35 (MQ=255) acaTTAGCGCTTTTGTCAGCGATCTGGAACGCCTg < 1:8367379‑M2/32‑1 (MQ=255) caTTAGCGCTTTTGTCAGCGATCTGGAACGCCTgg > 1:2600911‑M2/3‑35 (MQ=255) cATTAtgtactgaccccaaaaagttggacagttaa < 1:1585018‑M2/35‑31 (MQ=255) cATTAtgtactgaccccaaaaagttggacagttaa > 1:5366118‑M2/1‑5 (MQ=255) cATTAtgtactgaccccaaaaagttggacagttaa < 1:5282535‑M2/35‑31 (MQ=255) aatatgtactgaccccaaaaagttggacagttaaa < 1:13091003‑M2/33‑32 (MQ=255) aTTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGc < 1:1944114‑M2/34‑1 (MQ=255) ttAtgtactgaccccaaaaagttggacagttaaac > 1:7955961‑M2/1‑3 (MQ=255) ttAGCGCTTTTGTCAGCGATCTGGAACGCCTggcg > 1:13652519/1‑35 (MQ=255) ttAGCGCTTTTGTCAGCGATCTGGAACGCCTggcg < 1:2706230/35‑1 (MQ=255) ttAGCGCTTTTGTCAGCGATCTGGAACGCCTggcg < 1:298312/35‑1 (MQ=255) ttAGCGCTTTTGTCAGCGATCTGGAACGCCTggcg > 1:5866010/1‑35 (MQ=255) tAtgtactgaccccaaaaagttggacagttaaaca > 1:14941569‑M2/1‑2 (MQ=255) tAGCGCTTTTGTCAGCGATCTGGAACGCCTggcgg > 1:13898101/1‑35 (MQ=255) tAGCGCTTTTGTCAGCGATCTGGAACGCCTggcgg > 1:6651425/1‑35 (MQ=255) atgtactgaccccaaaaagttggacagttaaacac > 1:12685526‑M2/1‑1 (MQ=255) atgtactgaccccaaaaagttggacagttaaacac < 1:2199283‑M2/35‑35 (MQ=255) atgtactgaccccaaaaagttggacagttaaacac > 1:13944173‑M2/1‑1 (MQ=255) atgtactgaccacaaaaagttggacagttaaacac > 1:6145869‑M2/1‑1 (MQ=255) aGCGCTTTTGTCAGCGATCTGGAACGCCTggcggg > 1:12188264/1‑34 (MQ=255) | TCTGCTACCCGCTGAAGAAGCCGATAGCCTCATTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGCGGC > REL606/4110205‑4110273 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |