New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 294203 = | 75 (0.730) | 12 (0.160) | 3/36 | NT | 18.3% | intergenic (+473/‑54) | ykgD/ykgE | predicted DNA‑binding transcriptional regulator/predicted oxidoreductase |
? | REL606 | 836230 = | 51 (0.660) | coding (1876/2226 nt) | ybiO | predicted mechanosensitive channel |
CATGCCCATTTATGCCCGATGTTTCCCCCCCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/294237‑294203 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccgAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGT > REL606/836230‑836263 CATGCCCATTTATGCCCGATGTTTCCCCCCCACCG < 1:13957612/35‑1 CATGCCCATTTATGCCCGATGTTTCCCCCCCACCG < 1:11116027/35‑1 CATGCCCATTTATGCCCGATGTTTCCCCCCCACCG < 1:11533299/35‑1 ataTTTCCCCCCCACCGAACCAATGCCGCGGACAA < 1:19425606/32‑1 aaaTTTCCCCCCCACCGAACCAATGCCGCGGACAA < 1:16101204/32‑1 tTTTTCCCCCCACCGAACCAATGCCGCGGACAAAG < 1:14172639/34‑1 aTTTCCCCCCCACCGAACCAATGCCGCGGACAAAG < 1:19058345/34‑1 aTTCCCCCCCACCGAACCAATGCCGCGGACAAAGT < 1:3143252/34‑1 TTTGCCCCCCACCGAACCAATGCCGCGGACAAAGT < 1:2408103/35‑1 TTTCCCCCCCACCGAACCAATGCCGCGGACAAAGT < 1:9161145/35‑1 TTTCCCCCCCACCGAACCAATGCCGCGGACAAAGT < 1:9641579/35‑1 ttgCCCCCCACCGAACCAATGCCGCGGACAAAGTT < 1:18876735/32‑1 TTCCCCCCCACCGAACCAATGCCGCGGACAAAGTT < 1:11009195/35‑1 TTCCCCCCCACCGAACCAATGCCGCGGACAAAGTT < 1:6133603/35‑1 ttCCCCCCACCGAACCAATGCCGCGGACAAAGTTA < 1:8068942/33‑1 ccgCCCCCACCGAACCAATGCCGCGGACAAAGTTA < 1:12676819/32‑1 TCCCCCCCCCCGAACCAATGCCGCGGACAAAGTTA < 1:13430588/35‑1 TCCCCCCCACCGAACCAATGCCGCGGACAAAGTTA < 1:796267/35‑1 aCCCCCCACCGAACCAATGCCGCGGACAAAGTTAG < 1:11470925/34‑1 CCCCCCACCGAACCAATGCCGCGGACAAAGTTAGC < 1:6675886/35‑1 CCCCCACCGAACCAATGCCGCGGACAAAGTTAGCA < 1:6902590/35‑1 CCCCCACCGAACCAATGCCGCGGACAAAGTTAGCA < 1:844556/35‑1 CCCCCACCGAACCAATGCCGCGGACAAAGTTAGCA < 1:1149800/35‑1 CCCCACCGAACCAATGCCGCGGACAAAGTTAGCAA < 1:19400643/35‑1 CCCCCCGAACCAATGCCGCGGACAAAGTTAGCAAA < 1:8393756/35‑1 CCCACCGAACCAATGCCGCGGACAAAGTTAGCAAA < 1:13817666/35‑1 CCCACCGAACCAATGCCGCGGACAAAGTTAGCAAA < 1:13514938/35‑1 CCCACCGAACCAATGCCGCGGACAAAGTTAGCAAA < 1:3542413/35‑1 CCCACCGAACCAATGCCGCGGACAAAGTTAGCAAA < 1:2719871/35‑1 CCCACCGAACCAATGCCGCGGACAAAGTTAGCAAA < 1:17265318/35‑1 CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAG < 1:7404513/35‑1 CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAG > 1:2491644/1‑35 CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAG > 1:8767018/1‑35 CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAG < 1:9129269/35‑1 CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAG < 1:1097208/35‑1 CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAG > 1:13491285/1‑35 CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAG < 1:15614093/35‑1 CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAG < 1:16255440/35‑1 CACCGAACCAATGCCGCGGACAAAGTTAGCAAAtg > 1:12494036/1‑33 CACCGAACCAATGCCGCGGACAAAGTTAGCAAAGG < 1:8603849/35‑1 CACCGAACCAATGCCGCGGACAAAGTTAGCAAAGG > 1:15689662/1‑35 CACCGAACCAATGCCGCGGACAAAGTTAGCAAAGG > 1:11707909/1‑35 CACCGAACCAATGCCGCGGACAAAGTTAGCAAAGG > 1:20113808/1‑35 CACCGAACCAATGCCGCGGACAAAGTTAGCAAAGG > 1:18243061/1‑35 ACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGT < 1:11247831/35‑1 ACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGT < 1:16334344/35‑1 ACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGT > 1:9188428/1‑35 ACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGT > 1:12163694/1‑35 ACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGT > 1:17985398/1‑35 ACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGT > 1:16588386/1‑35 CCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTG > 1:7679221/1‑35 CCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTG > 1:5363517/1‑35 CCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTG < 1:16583532/35‑1 CCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTG > 1:14176664/1‑35 CCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTG < 1:2241043/35‑1 CCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTG > 1:2693049/1‑35 CCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTG > 1:2903152/1‑35 CGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGG < 1:2691723/35‑1 CGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGG < 1:12239134/35‑1 CGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGG > 1:12731800/1‑35 CGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGG < 1:12864899/35‑1 CGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGG < 1:13323533/35‑1 CGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGG < 1:6511292/35‑1 CGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGG < 1:6028298/35‑1 CGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGG < 1:4083320/35‑1 GAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGg > 1:16055946/1‑34 GAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGT < 1:13149231/35‑1 GAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGT > 1:14657211/1‑35 GAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGT > 1:14797231/1‑35 GAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGT < 1:13875058/35‑1 GAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGT > 1:5601566/1‑35 GAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGT > 1:17092772/1‑35 CATGCCCATTTATGCCCGATGTTTCCCCCCCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/294237‑294203 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccgAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGT > REL606/836230‑836263 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |