New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3656754 = | 92 (0.900) | 4 (0.070) | 3/28 | NT | 7.1% | coding (410/996 nt) | yiaH | conserved inner membrane protein |
? | REL606 | = 4045305 | 51 (0.850) | coding (165/1407 nt) | yihP | predicted transporter |
Only 100 of 188 total aligned reads displayed.
GTGATTTATCTGGTTTCACCGCTGATTCAGGTGAAGAACGTCGGCGGAAAAATGTTGCTGGTACTAATG > REL606/3656720‑3656788 | gTGATTTATCTGGTTTCACCGCTGATTCAGGTgaa > 1:8850728/1‑35 (MQ=255) aaagataatgccgccataggtgcctggcagcccca < 1:16584042‑M1/1‑1 (MQ=255) aaagataatgccgccataggtgcctggcagcccca < 1:324298‑M1/1‑1 (MQ=255) aaagataatgccgccataggtgcctggcagcccca < 1:6701251‑M1/1‑1 (MQ=255) aagataatgccgccataggtgcctggcagccccAg < 1:10948748‑M1/2‑1 (MQ=255) aagataatgccgccataggtgcctggcagccccAg < 1:736012‑M1/2‑1 (MQ=255) gATTTATCTGGTTTCACCGCTGATTCAGGTgaaga > 1:14220306/1‑35 (MQ=255) gATTTATCTGGTTTCACCGCTGATTCAGGTgaaga > 1:11354576/1‑35 (MQ=255) agataatgccgccataggtgcctggcagccccAGa < 1:11462184‑M1/3‑1 (MQ=255) agataatgccgccataggtgcctggcagccccAGa < 1:11542982‑M1/3‑1 (MQ=255) tttTTCTGTTTCCCCCGCTGATTCAGGTGAAGAAc < 1:17836689/35‑1 (MQ=19) tttATCTGGTTCCCCCGCTGATTCAGGTGAAGAAc < 1:564510/35‑1 (MQ=37) tttATCTGGTTCCCCCGCTGATTCAGGTGAAGAAc < 1:16835363/35‑1 (MQ=37) ataatgccgccataggtgccttgcagccccAGAAc < 1:12252997‑M1/5‑1 (MQ=255) ataatgccgccataggtgcctggcagccccAGAAc < 1:15830959‑M1/5‑1 (MQ=255) ttttCTGGTTCCCCCGCTGATTCAGGTGAAGAACg < 1:19223412/32‑1 (MQ=25) ttATCTGGTTTCACCGCTGATTCAGGTGAAGAACg > 1:17083330/1‑35 (MQ=255) taatgccgccataggtgcctggcagccccAGAACg < 1:2098833‑M1/6‑1 (MQ=255) tATCTGTTTCCCCCGCTGATTCAGGTGAAGAACGt < 1:632152/35‑1 (MQ=25) aatgccgccataggtgcctggcagccccAGAACGt < 1:16041242‑M1/7‑1 (MQ=255) gccccgccataggtgcctggcagccccAGAACGTc > 1:5120442‑M1/28‑35 (MQ=255) cccccgccataggtgcctggcagccccAGAACGTc > 1:4068314‑M1/28‑35 (MQ=255) atgccgccataggtgcctggcagccccAGAACGTc < 1:19362577‑M1/8‑1 (MQ=255) atgccgccataggtgcctggcagccccAGAACGTc < 1:19506456‑M1/8‑1 (MQ=255) atgccgccataggtgcctggcagccccAGAACGTc < 1:13414611‑M1/8‑1 (MQ=255) atgccgccataggtgcctggcagccccAGAACGTc < 1:11563066‑M1/8‑1 (MQ=255) atgccgccataggtgcctggcagccccAGAACGTc < 1:9268650‑M1/8‑1 (MQ=255) aTCTGTTTCCCCCGCTGATTCAGGTGAAGAACGTc < 1:19729905/35‑1 (MQ=25) aTCTGTTTCCCCCGCTGATTCAGGTGAAGAACGTc < 1:14403849/35‑1 (MQ=25) aTCTGGTTTCACCGCTGATTCAGGTGAAGAACGTc > 1:20244160/1‑35 (MQ=255) tgccgccataggtgcctggcagccccAGAACGTcg < 1:6172956‑M1/9‑1 (MQ=255) tgccgccataggtgcctggcagccccAGAACGTcg < 1:828138‑M1/9‑1 (MQ=255) tCTGGTTTCACCGCTTATTCAGGTGAAGAACGTcg > 1:3859746/1‑35 (MQ=255) tCTGGTTTCACCGCTGATTCAGGTGAAGAACGTcg > 1:16091066/1‑35 (MQ=255) ccccgccataggtgcctggcagccccAGAACGTcg > 1:7387351‑M1/27‑35 (MQ=255) cccgccataggtgcctggcagccccAGAACGTcgg > 1:18272024‑M1/26‑35 (MQ=255) cTGGTTTCACCGCTGATTCAGGTGAAGAACGTcgg > 1:11752566/1‑35 (MQ=255) cTGGTTTCACCGCTGATTCAGGTGAAGAACGTcgg > 1:9068842/1‑35 (MQ=255) tGGTTTCCCAGCTGATTCAGGTGAAGAACGTcggc < 1:16838574/35‑1 (MQ=37) tGGTTTCACCGCTGATTCAGGTGAAGAACGTcggc > 1:5710000/1‑35 (MQ=255) ggTTTCACCGCTGATTCAGGTGAAGAACGTcggcg > 1:12997451/1‑35 (MQ=255) ggTTTCACCGCTGATTCAGGTGAAGAACGTcggcg > 1:17202701/1‑35 (MQ=255) ggTTTCACCGCTGATTCAGGTGAAGAACGTcggcg > 1:14412798/1‑35 (MQ=255) cgccataggtgcctggcagccccAGAACgtcgggg < 1:2699706‑M1/12‑3 (MQ=255) gccataggtgcctggcagccccAGAAcgtcggggt < 1:5760073‑M1/13‑4 (MQ=255) gTTTCACCGCTGATTCAGGTGAAGAACGTcggcgg > 1:20583992/1‑35 (MQ=255) tttCACCGCTGATTCAGGTGAAGAACGTCGGCGGa > 1:15176627/1‑35 (MQ=255) ttCACCGCTGATTCAGGTGAAGAACGTcggcggga > 1:16180854/1‑33 (MQ=255) tccACCGCTGATTCAGGTGAAGAACGTCGGCGGaa < 1:1217434/33‑1 (MQ=255) taggtgcctggcagccccAGAACGTCGGGGGaaaa < 1:7237962‑M1/17‑1 (MQ=255) ccccGCTGATTCAGGTGAAGAACGTCGGCGGaaaa < 1:13496855/33‑1 (MQ=255) ccccGCTGATTCAGGTGAAGAACGTCGGCGGaaaa < 1:16328137/33‑1 (MQ=255) cACCGCTGATTCAGGTGAAGAACGTCGGCGGgaaa > 1:15585429/1‑35 (MQ=255) aCCGCTGATTCAGGTGAAGAACGTCGGCGGgaaaa > 1:2909295/1‑35 (MQ=255) aCCGCTGATTCAGGTGAAGAACGTCGGCGGaaaaa > 1:18513326/1‑35 (MQ=255) ccGCTGATTCAGGTGAAGAACGTCGGCGGGAAAAt > 1:11206470/1‑35 (MQ=255) ccGCTGATTCAGGTGAAGAACGTCGGCGGAAAAAt < 1:10640604/35‑1 (MQ=255) ccGCTGATTCAGGTGAAGAACGTCGGCGGAAAAAt < 1:6282422/35‑1 (MQ=255) gCTGATTCAGGTGAAGAACGTCGGCGGGAAAATGt > 1:311676/1‑35 (MQ=255) gCTGATTCAGGTGAAGAACGTCGGCGGGAAAATGt > 1:20133830/1‑35 (MQ=255) gCTGATTCAGGTGAAGAACGTCGGCGGGAAAATGt > 1:1485828/1‑35 (MQ=255) gCTGATTCAGGTGAAGAACGTCGGCGGAAAAATGt < 1:3969697/35‑1 (MQ=255) gCTGATTCAGGTGAAGAACGTCGGCGGAAAAATGt > 1:14188014/1‑35 (MQ=255) gCTGATTCAGGTGAAGAACGTCGGCGGAAAAATGt > 1:19143867/1‑35 (MQ=255) gCTGATTCAGGTGAAGAACGTCGGCGGAAAAATGt < 1:16422779/35‑1 (MQ=255) cTGATTCAGGTGAAGAACGTCGGCGGAAAAATGtt > 1:4235824/1‑35 (MQ=255) cTGATTCAGGTGAAGAACGTCGGCGGAAAAATGtt > 1:4280552/1‑35 (MQ=255) cTGATTCAGGTGAAGAACGTCGGCGGAAAAATGtt > 1:10043368/1‑35 (MQ=255) tGATTCAGGTGAAGAGCGTCGGCGGAAAAATGTTg < 1:20535260/35‑1 (MQ=255) tGATTCAGGTGAAGAACGTCGGCGGACAAATGTTg > 1:15763370/1‑35 (MQ=255) tGATTCAGGTGAAGAACGTCGGCGGAAAAATGTTg > 1:8494978/1‑35 (MQ=255) tGATTCAGGTGAAGAACGTCGGCGGAAAAATGTTg > 1:16782946/1‑35 (MQ=255) tGATTCAGGTGAAGAACGTCGGCGGAAAAATGTTg > 1:12715848/1‑35 (MQ=255) gATTCAGGTGAAGAACGTCGGCGGAAAAATGTTGc < 1:8629616/35‑1 (MQ=255) gATTCAGGTGAAGAACGTCGGCGGAAAAATGTTGc > 1:10807674/1‑35 (MQ=255) gATTCAGGTGAAGAACGTCGGCGGAAAAATGTTGc > 1:8041963/1‑35 (MQ=255) gATTCAGGTGAAGAACGTCGGCGGAAAAATGTTGc < 1:5014885/35‑1 (MQ=255) gATTCAGGTGAAGAACGTCGGCGGAAAAATGTTGc > 1:6344421/1‑35 (MQ=255) aTTCAGGTGAAGAACGTCGGCGGAAAAATGTTGCt > 1:2604147/1‑35 (MQ=255) aTTCAGGTGAAGAACGTCGGCGGAAAAATGTTGCt < 1:10978119/35‑1 (MQ=255) aTTCAGGTGAAGAACGTCGGCGGAAAAATGTTGCt > 1:11888365/1‑35 (MQ=255) ttCAGGTGAAGAACGTCGGCGGGAAAATGTTGCTg > 1:6914698/1‑35 (MQ=255) ttCAGGTGAAGAACGTCGGCGGAAAAATGTTGCTg < 1:3086947/35‑1 (MQ=255) tCAGGTGAAGAACGTCGGCGGAAAAATGTTGCTgg < 1:15999181/35‑1 (MQ=255) tCAGGTGAAGAACGTCGGCGGAAAAATGTTGCTgg < 1:20568036/35‑1 (MQ=255) tCAGGTGAAGAACGTCGGAGGAAAAATGTTGCTgg < 1:8235966/35‑1 (MQ=255) aGGTGAAGAACGTCGGCGGAAAAATGTTGCTGGTa < 1:11629085/35‑1 (MQ=255) ggTGAAGAACGTCGGCGGAAAAATGTTGCTGGTAc < 1:18913563/35‑1 (MQ=255) gTGAAGAACGTCGGCGGAAAAATGTTGCTGGTACt < 1:10098428/35‑1 (MQ=255) gTGAAGAACGTCGGCGGAAAAATGTTGCTGGTACt < 1:5263558/35‑1 (MQ=255) gTGAAGAACGTCGGCGGAAAAATGTTGATGGTACt < 1:18106265/35‑1 (MQ=255) tGAAGAACGTCGGCGGAAAAATGTTGCTGGTACTa < 1:10441816/35‑1 (MQ=255) gaagaaCGTCGGCGGAAAAATGTTGCTGGTACTaa < 1:9636172/35‑1 (MQ=255) gaagaaCGTCGGCGGAAAAATGTTGCTGGTACTaa < 1:1984639/35‑1 (MQ=255) gaagaaCGTCGGCGGAAAAATGTTGCTGGTACTaa > 1:778781/1‑35 (MQ=255) gaagaaCGTCGGCGGAAAAATGTTGCTGGTACTaa < 1:13761883/35‑1 (MQ=255) aagaaCGTCGGCGGAAAAATGTTGCTGGTACTAAt > 1:3313493/1‑35 (MQ=255) aagaaCGTCGGCGGAAAAATGTTGCTGGTACTAAt > 1:12213436/1‑35 (MQ=255) aagaaCGTCGGCGGAAAAATGTTGCTGGTACTAAt < 1:1476779/35‑1 (MQ=255) AGAACGTCGGCGGAAAAATGTTGCTGGTACTAATg > 1:2513690‑M1/1‑35 (MQ=255) | GTGATTTATCTGGTTTCACCGCTGATTCAGGTGAAGAACGTCGGCGGAAAAATGTTGCTGGTACTAATG > REL606/3656720‑3656788 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |