New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1430232 = | 98 (0.950) | 7 (0.100) | 3/34 | NT | 10.1% | coding (2159/3525 nt) | ydbK | fused predicted pyruvate‑flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein |
? | REL606 | 3284457 = | 55 (0.760) | coding (588/729 nt) | mtgA | monofunctional biosynthetic peptidoglycan transglycosylase |
AAAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1430272‑1430232 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccagTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCG > REL606/3284457‑3284490 gAAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCC > 1:2208018/2‑35 AAAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCC < 1:7564951/35‑1 AAAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCC > 1:5812246/1‑35 AAAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCC > 1:5398374/1‑35 AAGTGGTGCCGCCTGAATCGATGGAAAACGCCCCT > 1:8535950/1‑35 AAGTGGTGCCGCCTGAATCGATGGAAAACGCCCCT > 1:16373761/1‑35 AAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCT < 1:6459760/35‑1 AAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCT > 1:2856243/1‑35 AAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCT < 1:1977683/35‑1 AAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCT > 1:16835487/1‑35 AAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCT > 1:14046071/1‑35 AAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCT < 1:1021834/35‑1 AGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCTG > 1:1161373/1‑35 AGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCTG > 1:11875314/1‑35 AGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCTG < 1:7887874/35‑1 AGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCTG > 1:4717068/1‑35 AGTGGTGACGCCTGAAGCGATGGAAAACGCCCCTG < 1:3334048/35‑1 GTGGTGCCGCCTGAAGCGATGGAAAACGCCCCTGC > 1:8921993/1‑35 GTGGTGCCGCCTGAAGCGATGGAAAACGCCCCTGC > 1:14192073/1‑35 TGGTGCCGCCTGAAGCGATGGAAAACGCCCCTGCC > 1:17012696/1‑35 TGGTGCCGCCTGAAGCGATGGAAAACGCCCCTGCC < 1:12838061/35‑1 TGGTGCCGCCTGAAGCGATGGAAAACGCCCCTGCC > 1:229642/1‑35 TGGTGCCGCCTGAAGCGATGGAAAACGCCCCTGCC < 1:20243807/35‑1 GGTGCCGCCTGAAGCTATGGAAAACGCCCCTGCCA > 1:11083961/1‑35 GGTGCCGCCTGAAGCGATGGAAAACGCCCCTGCCA > 1:6007952/1‑35 ggGCCGCCTGAAGCGATGGAAAACGCCCCTGCCAG < 1:3521949/33‑1 GTGCCGCCTGAAGCGATGGAAAAGGCCCCTGCCAG < 1:1259644/35‑1 GTGCCGCCTGAAGCGATGGAAAACGCCCCTGCCAG < 1:16675612/35‑1 GTGCCGCCTGAAGCGATGGAAAACGCCCCTGCCAG < 1:5474601/35‑1 GTGCCGCCTGAAGCGATGGAAAACGCCCCTGCCAG < 1:11142087/35‑1 GTGCCGCCTGAAGCGATGGAAAACGCCCCTGCCAG > 1:3180452/1‑35 GTGCCGCCTGAAGCGATGGAAAACGCCCCTGCCAG > 1:8470213/1‑35 GTGCCGCCTGAAGCGATGGAAAACGCCCCTGCCAG < 1:8087869/35‑1 GTGCCGCCTGAAGCGATGGAAAACGCCCCTGCCAG > 1:1596381/1‑35 GTGCCGCCTGAAGCGATGCAAAACGCCCCTGCCAG > 1:8126472/1‑35 GTGCAGCCTGAAGCGATGGAAAACGCCCCTGCCAG < 1:14900020/35‑1 GGAAAACCCCCCTGCCAGTAATGCAGCTTCCGACC < 1:9719572/35‑1 GAAAACCCCCCTGCCAGTAATGCAGCTTCCGACCG < 1:8639598/35‑1 GAAAACACCCCTGCCAGTAATGCAGCTTCCGACCG < 1:8379599/35‑1 GAAAACACCCCTGCCAGTAATGCAGCTTCCGACCG < 1:9623199/35‑1 tAACCCCCCTGCCAGTAATGCAGCTTCCGACCGGG < 1:1046908/34‑1 AACCCCCCTGCCAGTAATGCAGCTTCCGACCGGGT < 1:17474359/35‑1 AACCCCCCTGCCAGTAATGCAGCTTCCGACCGGGT < 1:13946148/35‑1 cccCCCCTGCCAGTAATGCAGCTTCCGACCGGGTN < 1:11205032/32‑1 cccCCCCTGCCAGTAATGCAGCTTCCGACCGGGTA < 1:9616769/32‑1 accCCCCTGCCAGTAATGCAGCTTCCGACCGGGTA < 1:2122852/32‑1 ccCCCCTGCCAGTAATGCAGCTTCCGACCGGGTAA < 1:460832/33‑1 ccCCCCTGCCAGTAATGCAGCTTCCGACCGGGTAA < 1:406484/33‑1 cCCCCTGCCAGTAATGCAGCTTCCGACCGGGTAAG < 1:18350050/34‑1 cCCCCTGCCAGTAATGCAGCTTCCGACCGGGTAAG < 1:11747087/34‑1 CCCCTGCCAGTAATGCAGCTTCCGACCGGGTAAGT < 1:6996888/35‑1 CCCCTGCCAGTAATGCAGCTTCCGACCGGGTAAGT < 1:12565281/35‑1 CCCCTGCCAGTAATGCAGCTTCCGACCGGGTAAGT < 1:19758630/35‑1 CCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTT < 1:16878466/35‑1 CTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTG > 1:17430637/1‑35 CTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTG < 1:6014257/35‑1 CTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTG < 1:5755216/35‑1 CTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTG > 1:459299/1‑35 CTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTG < 1:4536649/35‑1 CTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTG < 1:15209386/35‑1 CTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTG < 1:2684527/35‑1 CTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTG > 1:13048670/1‑35 TGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGC < 1:8360080/35‑1 TGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGC > 1:16246211/1‑35 TGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGC > 1:5285808/1‑35 TGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGC < 1:16337035/35‑1 TGCCAGTAATGCAGCTTCCGACCGCGTAAGTTTGC > 1:2861085/1‑35 ctCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCT < 1:15035378/33‑1 GCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCT > 1:19910512/1‑35 GCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCT > 1:2958199/1‑35 CCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTC < 1:7964889/35‑1 CCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTC < 1:14126373/35‑1 CCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTC < 1:1663586/35‑1 CCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTC > 1:13663019/1‑35 CCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTC > 1:2861729/1‑35 CCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTC < 1:3111844/35‑1 CCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTC > 1:11168957/1‑35 CCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTC > 1:4037507/1‑35 CAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCG > 1:10911669/1‑35 CAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCG < 1:6669766/35‑1 CAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCG < 1:18826190/35‑1 CAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCG > 1:19961606/1‑35 CAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCG < 1:15239788/35‑1 AGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGC > 1:3049267/1‑35 AGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGC < 1:13552841/35‑1 AGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGC > 1:15842880/1‑35 AGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGC < 1:8096177/35‑1 AGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGC > 1:2096822/1‑35 AGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGC < 1:10306745/35‑1 AGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGC < 1:5717255/35‑1 AGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGC > 1:5979425/1‑35 GTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCG < 1:3356124/35‑1 GTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCG > 1:3252691/1‑35 AAAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1430272‑1430232 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccagTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCG > REL606/3284457‑3284490 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |