Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 4,110,237 | IS150 (–) +3 bp | 100% | coding (296‑298/2433 nt) | metL → | bifunctional aspartate kinase II/homoserine dehydrogenase II |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3893554 = | NA (NA) | 139 (1.480) | 43/44 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 4110237 = | 0 (0.000) | coding (296/2433 nt) | metL | bifunctional aspartate kinase II/homoserine dehydrogenase II | |||||
* | ? | REL606 | = 3894996 | NA (NA) | 79 (0.770) | 28/48 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 4110239 | 0 (0.000) | coding (298/2433 nt) | metL | bifunctional aspartate kinase II/homoserine dehydrogenase II |
Only 100 of 131 total aligned reads displayed.
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3894963‑3894996 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAATGAGGCTATCGGCTTCTTCAGCGGGTAGCAG < REL606/4110239‑4110206 GTGTTTAACTGTCCAACTTTTTGTGGTCAGTACAT > 1:6145869/1‑35 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT > 1:15886101/1‑35 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT < 1:8485161/35‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT < 1:2199283/35‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT > 1:8338823/1‑35 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT < 1:3427745/35‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT < 1:3834127/35‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT > 1:13944173/1‑35 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT < 1:4015528/35‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT < 1:19571347/35‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT > 1:12685526/1‑35 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATg < 1:5067116/35‑2 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATA < 1:8276837/35‑1 GTTTAACTGTCCAACTTTTTTGGGTCAGTACATAA > 1:14791968/1‑35 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA < 1:20518981/35‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA > 1:13031370/1‑35 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA > 1:16153077/1‑35 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA > 1:20375474/1‑35 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA > 1:17744236/1‑35 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA < 1:13973185/35‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA < 1:14622383/35‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA > 1:7955961/1‑35 TTTAACTGTCCAACTTTTTGGGGTCAGTACATAtt < 1:13091003/35‑3 TTTAACTGTCCAACTTTTTGGGGTCAGTACATAAT > 1:11627023/1‑35 TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG < 1:1585018/35‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG < 1:17423695/35‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG > 1:3871059/1‑35 TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG < 1:7902151/35‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG < 1:18133471/35‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG < 1:5282535/35‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG > 1:5366118/1‑35 TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG > 1:18029835/1‑35 TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG > 1:12775706/1‑35 TAACTGTCCAACTTTTTGGGGTCAGTACATAATGA < 1:14936942/35‑1 AACTGTCCAACTTTTTGGGGTCAGTACATAATGAG > 1:19429098/1‑35 AACTGTCCAACTTTTTGGGGTCAGTACATAATGAG < 1:19380247/35‑1 AACTGTCCAACTTTTTGGGGTCAGTACATAATGAG < 1:13655515/35‑1 AACTGTCCAACTTTTTGGGGTCAGTACATAATGAG > 1:10408996/1‑35 ACTGTCCAACTTTTTGGGGTCAGTACATAATGAGG < 1:15810312/35‑1 ACTGTCCAACTTTTTGGGGTCAGTACATAATGAGG < 1:2576815/35‑1 CTGTCCAACTTTTTGGGGTCAGTACATAATGAGGC > 1:20144540/1‑35 CTGTCCAACTTTTTGGGGTCAGTACATAATGAGGC < 1:14775945/35‑1 CTGTCCAACTTTTTGGGGTCAGTACATAATGAGGC > 1:7004601/1‑35 CTGTCCAACTTTTTGGGGTCAGTACATAATGAGGC > 1:19513236/1‑35 CTGTCCAACTTTTTGGGGTCAGTACATAATGAGGC < 1:910161/35‑1 GTCCAACTTTTTGGGGTCAGTACATAATGAGGCTA < 1:15030884/35‑1 GTCCAACTTTTTGGGGTCAGTACATAATGAGGCTA > 1:2824711/1‑35 GTCCAACTTTTTGGGGTCAGTACATAATGAGGCTA < 1:17009835/35‑1 GTCCAACTTTTTGGGGTCAGTACATAATGAGGCTA > 1:12843745/1‑35 GTCCAACTTTTTGGGGTCAGTACATAATGAGGCTA > 1:6167567/1‑35 GTCCAACTTTTTGGGGTCAGTACATAATGAGGCTA < 1:20070594/35‑1 TCCAACTTTTTGGGGTCAGTAGATAATGAGGCTAT < 1:10235729/35‑1 TCCAACTTTTTGGGGTCAGTACATAATGAGGCTAc > 1:20325980/1‑34 TCCAACTTTTTGGGGTCAGTACATAATGAGGCTAa > 1:11259304/1‑34 TCCAACTTTTTGGGGTCAGTACATAATGAGGCTAT < 1:13149184/35‑1 TCCAACTTTTTGGGGTCAGTACATAATGAGGCTAT < 1:1669588/35‑1 CCAACTTTTTGGGGTCAGTACATAATGAGGCTAaa > 1:9227780/1‑33 CAACTTTTTGGGGTCAGTACATAATGAGGCTAaaa > 1:3131777/1‑32 CAACTTTTTGGGGTCAGTACATAATGAGGCTATCG > 1:135739/1‑35 CAACTTTTTGGGGTCAGTACATAATGAGGCTATCG > 1:2301758/1‑35 AACTTTTTGGGGTCAGTACATAATGAGTCTATCGG > 1:14493390/1‑35 AACTTTTTGGGGTCAGTACATAATGAGGCTATCGG < 1:19068675/35‑1 AACTTTTTGGGGTCAGTACATAATGAGGCTATCGG < 1:7483958/35‑1 ACTTTTTGGGGTCAGTACATAATGAGGCTATCGGC < 1:11912970/35‑1 ACTTTTTGGGGTCAGTACATAATGAGGCTATCGGC < 1:15506107/35‑1 ACTTTTTGGGGTCAGTACATAATGAGGCTATCGGC < 1:19375134/35‑1 ACTTTTTGGGGTCAGTACATAATGAGGCTAACGGC > 1:15009595/1‑35 ACTTTTTGGGGTCAGTACATAATGAGGCTAACGGC > 1:3558471/1‑35 CTTTTTGGGGTCAGTACATAATGAGGCTATCGGCT < 1:19144163/35‑1 CTTTTTGGGGTCAGTACATAATGAGGCTATCGGCT < 1:11166860/35‑1 TTTTTGGGGTCAGTACATAATGAGGATATCGGCTT < 1:9555885/35‑1 TTTTGGGGTCAGTACATAATGAGGCTATCGGCTTC < 1:10681247/35‑1 TTTTGGGGTCAGTACATAATGAGGCTATCGGCTTC < 1:11278868/35‑1 TTTTGGGGTCAGTACATAATGAGGCTATCGGCTTC < 1:4325785/35‑1 TTTTGGGGTCAGTACATAATGAGGCTAACGGCTTt > 1:9895267/1‑34 TTTGGGGTCAGTACATAATGAGGCTATCGGCTTCT < 1:18727009/35‑1 TTGGGGTCAGTACATAATGAGGCTATCGGCTTCTT < 1:10396128/35‑1 TTGGGGTCAGTACATAATGAGGCTATCGGCTTCTT < 1:12070117/35‑1 GGGGTCAGTACATAATGAGGCTATCGGCTTCTTCA < 1:9786967/35‑1 GGGGTCAGTACATAATGAGGCTATCGGCTTCTTCA < 1:5698781/35‑1 GGGTCAGTACATAATGAGGCTATCGGCTTCTTCAG < 1:9944705/35‑1 GGGTCAGTACATAATGAGGCTATCGGCTTCTTCAG < 1:19560041/35‑1 GGGTCAGTACATAATGAGGCTATCGGCTTCTTCAG < 1:2706339/35‑1 GGTCAGTACATAATGAGGCTATCGGCTTCTTCAGC < 1:5521049/35‑1 GGTCAGTACATAATGAGGCTATCGGCTTCTTCAGC < 1:13557793/35‑1 GGTCAGTACATAATGAGGCTATCGGCTTCTTCAGC < 1:16952810/35‑1 GGTCAGTACATAATGAGGCTATCGGCTTCTTCAGC < 1:3767650/35‑1 GTCAGTACATAATGAGGCTATCGGCTTCTTCAGCG < 1:3227595/35‑1 GTCAGTACATAATGAGGCTATCGGCTTCTTCAGCG < 1:13935297/35‑1 CAGTACATAATGAGGCTATCGGCTTCTTCAGCGGG < 1:4525125/35‑1 CAGTACATAATGAGGCTATCGGCTTCTTCAGCGGG < 1:14184631/35‑1 atTACATAATGAGGCTATCGGCTTCTTCAGCGGGT < 1:7848991/33‑1 AGTACATAATGAGGCTATCGGCTTCTTCAGCGGGT < 1:14271990/35‑1 AGTACATAATGAGGCTATCGGCTTCTTCAGCGGGT < 1:6717374/35‑1 GTACATAATGAGGCTATCGGCTTCTTCAGCGGGTA < 1:6752879/35‑1 TACATAATGAGGCTATCGGCTTCTTCAGCGGGTAG < 1:5040129/35‑1 TACATAATGAGGCTATCGGCTTCTTCAGCGGGTAG < 1:11885654/35‑1 CATAATGAGGCTATCGGCTTCTTCAGCGGGTAGCA < 1:1610938/35‑1 CATAATGAGGCTATCGGCTTCTTCAGCGGGTAGCA < 1:16110781/35‑1 ATAATGAGGCTATCGGCTTCTTCAGCGGGTAGCAG < 1:6065412/35‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3894963‑3894996 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAATGAGGCTATCGGCTTCTTCAGCGGGTAGCAG < REL606/4110239‑4110206 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |