New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 957480 = | 61 (0.590) | 11 (0.150) | 3/34 | NT | 20.1% | coding (960/1293 nt) | serS | seryl‑tRNA synthetase |
? | REL606 | = 3467034 | 44 (0.600) | coding (963/2319 nt) | yhgF | predicted transcriptional accessory protein |
CCATGTCGCCAGTGCAAAGGATGATTTTACGGTACGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/957520‑957480 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaggGGCCGCCATCAGCAGATCGTGCAGGTTACGGGCA < REL606/3467034‑3467001 CCATGTCGCCAGTGCAAAGTATGATTTTACGGTAC > 1:1058691/1‑35 CCATGTCGCCAGTGCAAAGGATGATTTTACGGTAC > 1:16948497/1‑35 CCATGTCGCCAGTGCAAAGGATGATTTTACGGTAC < 1:182030/35‑1 CCATGTCGCCAGTGCAAAGGATGATTTTACGGTAC > 1:15879327/1‑35 CCATGTCGCCAGTGCAAAGGATGATTTTACGGTAC < 1:11792047/35‑1 CCATGTCGCCAGTGCAAAGGATGATTTTACGGTAC < 1:19556294/35‑1 CATGTCGCCAGTGCAAAGGATGATTTTACGGTACG < 1:9164419/35‑1 CATGTCGCCAGTGCAAAGGATGATTTTACGGTACG < 1:18272076/35‑1 CATGTCGCCAGTGCAAAGGATGATTTTACGGTACG > 1:7795464/1‑35 ATGTCGCCAGTGCAAAGGATGATTTTACGGTACGG > 1:3109498/1‑35 ATGTCGCCAGTGCAAAGGATGATTTTACGGTACGG < 1:7718601/35‑1 TGTCGCCAGTGCAAAGGATGATTTTACGGTACGGC < 1:13035039/35‑1 TGTCGCCAGTGCAAAGGATGATTTTACGGTACGGC < 1:20430532/35‑1 TGTCGCCAGTGCAAAGGATGATTTTACGGTACGGC > 1:452668/1‑35 GTCGCCAGTGCAAAGGATGATTTTACGGTACGGCA < 1:81970/35‑1 GTCGCCAGTGCAAAGGATGATTTTACGGTACGGCA > 1:12460091/1‑35 GTCGCCAGTGCAAAGGATGATTTTACGGTACGGCA < 1:6288793/35‑1 GTCGCCAGTGCAAAGGATGATTTTACGGTACGGCA > 1:10820075/1‑35 GTCGCCAGTGCAAAGGATGATTTTACGGTACGGCA < 1:16781118/35‑1 TCGCCAGTGCAAAGGATGATTTTACGGTACTGCAG > 1:12849234/1‑35 TCGCCAGTGCAAAGGATGATTTTACGGTACGGCAG < 1:19002862/35‑1 TCGCCAGTGCAAAGGATGATTTTACGGTACGGCAG < 1:188968/35‑1 TCGCCAGTGCAAAGGATGATTTTACGGTACGGCAG < 1:12139248/35‑1 TCGCCAGTGCAAAGGATGATTTTACGGTACGGCAG < 1:20521646/35‑1 CGCCAGTGCAAAGGATGATTTTACGGTACGGCAGG < 1:20233852/35‑1 CGCCAGTGCAAAGGATGATTTTACGGTACGGCAGG < 1:17315581/35‑1 CGCCAGTGCAAAGGATGATTTTACGGTACGGCAGG > 1:12982154/1‑35 CGCCAGTGCAAAGGATGATTTTACGGTAAGGCAGG < 1:7109773/35‑1 GCCAGTGCAAAGGATGATTTTACGGTACGGCAGGG > 1:3469077/1‑35 CCAGTGCAAAGGATGATTTTACTGTACGGCAGGGc > 1:17430073/1‑34 CCAGTGCAAAGGATGATTTTACGGTACGGCAGGGG > 1:18929419/1‑35 CAGTGCAAAGTATGATTTTACGGTACGGCAGGGGC > 1:2389180/1‑35 CAGTGCAAAGGATGATTTTACGGTACGGCAGGGcc > 1:4567363/1‑33 CAGTGCAAAGGATGATTTTACGGTACGGCAGGGGC > 1:14960093/1‑35 AGTGCAAAGGATTATTTTACGGTACGGCAGGGGCC > 1:2268640/1‑35 AGTGCAAAGGATGATTTTACGGTACGGCAGGGcca > 1:10910113/1‑32 GTGCAAAGGATGATTTTACGGTACGGCAGGGGCgg > 1:19889566/1‑33 TGCAAAGGATGATTTTACGGTACGGCAGGGGCCGC > 1:11646770/1‑35 TGCAAAGGATGATTTTACGGTACGGCAGGGGCAGC > 1:5439144/1‑35 GCAAAGGATGATTTTACGGTACGGCAGGGGCCGCa > 1:5943146/1‑34 GCAAAGGATGATTTTACGGTACGGCAGGGGCCGCC > 1:5843004/1‑35 GCAAAGGATGATTTTACGGTACGGCAGGGGCCGCC > 1:5596180/1‑35 GCAAAGGATGATTTTACGGTACGGCAGGGCCCGCa > 1:7786850/1‑34 CAAAGGATGATTTTACGGTACGGCAGGGGCCGCCA > 1:808803/1‑35 CAAAGGATGATTTTACGGTACGGCAGGGGCCGCCA > 1:574800/1‑35 AAAGGATGATTTTACGGTACGGCAGGGGCCGCaac > 1:5132259/1‑32 AAAGGATGATTTTACGGTACGGCAGGGGCCCCCAc > 1:1087860/1‑34 AAAGGATGATTTTACGGTACGGCAGGGCCCGCCAc > 1:6469349/1‑34 CGGCAGGGGCCGCCATCAGCAGATCGTGCAGGTTA > 1:5656658/1‑35 GGCAGGGGCCGCCATCAGCAGATCGTGCAGGTTAC > 1:16572623/1‑35 GCAGGGGCCGCCATCAGCAGATCGTGCAGGTTACG > 1:10571451/1‑35 cgGGGGCCGCCATCAGCAGATCGTGCAGGTTACGG < 1:7678820/33‑1 CAGGGGCCGCCATCAGCAGATCGTGCAGGTTACtg > 1:14346288/1‑33 CAGGGGCCGCCATCAGCAGATCGTGCAGGTTACGG > 1:14336147/1‑35 gGGGCCCGCCATCAGCAGATCGTGCAGGTTACGGG < 1:15405036/34‑1 gGGGCCCGCCATCAGCAGATCGTGCAGGTTACGGG < 1:10090166/34‑1 AGGGGCCGCCATCAGCATATCGTGCAGGTTACGGG > 1:13031986/1‑35 AGGGGCCGCCATCAGCAGATCGTGCAGGTTACGGG > 1:19872111/1‑35 AGGGGCCGCCATCAGCAGATCGTGCAGGTTACGGG > 1:16760381/1‑35 GGGGCCGCCATCAGCAGATCGTGCAGGTTACGGGC > 1:6677603/1‑35 GGGGCCGCCATCAGCAGATCGTGCAGGTTACGGGC > 1:16320594/1‑35 GGGGCCGCCATCAGCAGATCGTGCAGGTTACGGGC < 1:13640429/35‑1 GGGGCCGCCATCAGCAGATCGTGCAGGTTACGGGC > 1:9609551/1‑35 GGGCCCGCCATCAGCAGATCGTGCAGGTTACGGGC < 1:4236281/35‑1 GGGCCGCCATCAGCAGATCGTGCAGGTTACGGGCA > 1:2577508/1‑35 GGGCCGCCATCAGCAGATCGTGCAGGTTACGGGCA > 1:6481313/1‑35 GGGCCGCCATCAGCAGATCGTGCAGGTTACGGGCA > 1:16508302/1‑35 GGGCCGCCATCAGCAGATCGTGCAGGTTACGGGCA > 1:13562236/1‑35 CCATGTCGCCAGTGCAAAGGATGATTTTACGGTACGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/957520‑957480 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaggGGCCGCCATCAGCAGATCGTGCAGGTTACGGGCA < REL606/3467034‑3467001 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |