New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3615477 = | 121 (1.180) | 11 (0.110) | 4/48 | NT | 10.1% | coding (3189/3474 nt) | bcsC | cellulose synthase subunit |
? | REL606 | = 3947083 | 74 (0.720) | coding (724/1656 nt) | aslA | acrylsulfatase‑like enzyme |
Only 100 of 144 total aligned reads displayed.
CGCACGGCATGAACGTCATCTTTGCTGAACGGCAG‑TTTTTGGATGTATTCAGAACGATCCGGGCTCAGG > REL606/3947049‑3947117 | cgcACGGCATGAACGTCATCTTTGCTGAACGGCAg > 1:18907926/1‑35 (MQ=255) cgcACGGCATGAACGTCATCTTTGCTGAACGGCAg > 1:15897162/1‑35 (MQ=255) cgcACGGCATGAACGTCATCTTTGCTGAACGGCAg > 1:15925854/1‑35 (MQ=255) cgcACGGCATGAACGTCATCTTTGCTGAACGGCAg > 1:18727865/1‑35 (MQ=255) gcACGGCATGAACGTCATCTTTGCTGAACGGCAG‑t < 1:13145323/35‑1 (MQ=255) gCACGGCATGAACGTCATCTTTGCTGAACGGCAGg < 1:20449305‑M2/35‑2 (MQ=255) gCACGGCATGAACGTCATCTTTGCTGAACGGCAGg < 1:4638967‑M2/35‑2 (MQ=255) gCACGGCATGAACGTCATCTTTGCTGAACGGCAGg < 1:3672730‑M2/35‑2 (MQ=255) cACGGCATGAACGTCATCTTTGCTGAACGGCAGgg < 1:16168894‑M2/35‑3 (MQ=255) cACGGCATGAACGTCATCTTTGCTGAACGGCAGgg < 1:4069072‑M2/35‑3 (MQ=255) cACGGCATGAACGTCATCTTTGCTGAACGGCAGgg < 1:12131706‑M2/35‑3 (MQ=255) cACGGCATGAACGTCATCTTTGCTGAACGGCAGgg < 1:6411379‑M2/35‑3 (MQ=255) cACGGCATGAACGTCATCTTTGCTGAACGGCAGgg < 1:6600737‑M2/35‑3 (MQ=255) cACGGCATGAACGTCATCTTTGCTGAACGGCAGgg < 1:757128‑M2/35‑3 (MQ=255) aCGGCATGAACGTCATCTTTGCTGAACGGCAGggt < 1:3757545‑M2/35‑4 (MQ=255) aCGGCATGAACGTCATCTTTGCTGAACGGCAGggg < 1:3412097‑M2/35‑4 (MQ=255) aCGGCATGAACGTCATCTTTGCTGAACGGCAGggg < 1:16518166‑M2/35‑4 (MQ=255) aCGGCATGAACGTCATCTTTGCTGAACGGCAG‑ttt < 1:18618370/35‑1 (MQ=255) aCGGCATGAACGTCATCTTTGCTGAACGGCAG‑ttt < 1:16908244/35‑1 (MQ=255) aCGGCATGAACGTCATCTTTGCTGAACGGCAG‑ttt < 1:12652360/35‑1 (MQ=255) aCGGCATGAACGTCATCTTTGCTGAACGGCAG‑ttt < 1:15200034/35‑1 (MQ=255) cGGCATGAACGTCATCTTTGCTGAACGGCAGgggt < 1:16437497‑M2/35‑5 (MQ=255) cGGCATGAACGTCATCTTTGCTGAACGGCAGgggt < 1:17752810‑M2/35‑5 (MQ=255) cGGCATGAACGTCATCTTTGCTGAACGGCAGgggg < 1:10053253‑M2/35‑5 (MQ=255) cGGCATGAACGTCATCTTTGCTGAACGGCAG‑tttt < 1:14499411/35‑1 (MQ=255) ggCATGAACGTCATCTTTGCTGAACGGCAGgggtt < 1:230793‑M2/35‑6 (MQ=255) ggCATGAACGTCATCTTTGCTGAACGGCAGgggtt < 1:10025650‑M2/35‑6 (MQ=255) ggCATGAACGTCATCTTTGCTGAACGGCAGggggt < 1:13436441‑M2/35‑6 (MQ=255) gCATGAACGTCATCTTTGCTGAACGGCAGggtttt < 1:741744‑M2/35‑7 (MQ=255) cATGAACGTCATCTTTGCTGAACGGCAGggttttg < 1:17485750‑M2/35‑8 (MQ=255) cATGAACGTCATCTTTGCTGAACGGCAG‑TTTTTgg < 1:13853680/35‑1 (MQ=255) cATGAACGTCATCTTTGCTGAACGGCAG‑TTTTTgg < 1:2640574/35‑1 (MQ=255) aTGAACGTCATCTTTGCTGAACGGCAGggtttggg < 1:9874127‑M2/35‑9 (MQ=255) aTGAACGTCATCTTTGCTGAACGGCAG‑TTTTTGGa < 1:8314775/35‑1 (MQ=255) aTGAACGTCATCTTTGCTGAACGGCAG‑TTTTTGGa < 1:7826303/35‑1 (MQ=255) aTGAACGTCATCTTTGCTGAACGGCAG‑TTTTTGGa < 1:12634575/35‑1 (MQ=255) agcGTCATCTTTGCTGAACGGCAG‑TTTTTGGATGt < 1:13706149/33‑1 (MQ=255) aaCGTCATCTTTGCTGAACGGCAGggttttggttt < 1:13041534‑M2/35‑12 (MQ=255) aaCGTCATCTTTGCTGAACGGCAGgggtttggtgg < 1:15384373‑M2/35‑12 (MQ=255) aaCGTCATCTTTGCTGAACGGCAGgggtttggtgg < 1:17303595‑M2/35‑12 (MQ=255) cGTCATCTTTGCTGAACGGCAGggttttggtgggt < 1:5558885‑M2/35‑14 (MQ=255) cGTCATCTTTGCTGAACGGCAG‑TTTTTGGATGTAt < 1:18914218/35‑1 (MQ=255) cGTCATCTTTGCTGAACGGCAG‑TTTTTGGATGTAt < 1:8964069/35‑1 (MQ=255) cGTCATCTTTGCTGAACGGCAG‑TTTTTGGATGTAt < 1:7733103/35‑1 (MQ=255) gTCATCTTTGCTGAACGGCAGggttttggtgggtg < 1:5238842‑M2/35‑15 (MQ=255) gTCATCTTTGCTGAACGGCAG‑TTTTTGGATGTAtt < 1:17205834/35‑1 (MQ=255) gTCATCTTTGCTGAACGGCAG‑TTTTTGGATGTAtt < 1:2930999/35‑1 (MQ=255) tCATCTTTGCTGAACGGCAG‑TTTTTGGATGTATTc < 1:19515411/35‑1 (MQ=255) tCATCTTTGCTGAACGGCAG‑TTTTTGGATGTATTc < 1:1330388/35‑1 (MQ=255) cATCTTTGCTGAACGGCAG‑TTTTTGGATGTATTCa < 1:18320539/35‑1 (MQ=255) cATCTTTGCTGAACGGCAG‑TTTTTGGATGTATTCa < 1:13710209/35‑1 (MQ=255) cATCTTTGCTGAACGGCAG‑TTTTTGGATGTATTCa < 1:12967294/35‑1 (MQ=255) aTCTTTGCTGAACTGCAG‑TTTTTGGATGTATTCAg > 1:16252848/1‑35 (MQ=255) tCTTTGCTGAACGGCAGTTTTTTGGATGTATTCAg < 1:15224029/35‑1 (MQ=37) tCTTTGCTGAACGGCAG‑TTTTTGGATGTATTCAGa < 1:11830229/35‑1 (MQ=255) tCTTTGCTGAACGGCAG‑TTTTTGGATGTATTCAGa < 1:8140916/35‑1 (MQ=255) cTTTGCTGAACGGCAG‑TTTTTGGATGTATTCAGaa < 1:2098064/35‑1 (MQ=255) cTTTGCTGAACGGCAG‑TTTTTGGATGTATACAGaa < 1:2193584/35‑1 (MQ=255) tttGCTGAACGGCAG‑TTTTTGGATGTATTCAGAAc < 1:15641470/35‑1 (MQ=255) tttGCTGAACGGCAG‑TTTTTGGATGTATTCAGAAc < 1:6842072/35‑1 (MQ=255) tttGCTGAACGGCAG‑TTTTTGGATGTATTCAGAAc < 1:2639314/35‑1 (MQ=255) ttGCTGAACGGCAG‑TTTTTGGATGTATTCAGAACg < 1:11692173/35‑1 (MQ=255) ttGCTGAACGGCAG‑TTTTTGGATGTATTCAGAACg < 1:14233988/35‑1 (MQ=255) ttGCTGAACGGCAG‑TTTTTGGATGTATTCAGAACg < 1:4430750/35‑1 (MQ=255) ttGCTGAACGGCAG‑TTTTTGGATGTATTCAGAACg < 1:1217725/35‑1 (MQ=255) tGCTGAACGGCAG‑TTTTTGGATGTATTCAGAACGa < 1:11605330/35‑1 (MQ=255) tGCTGAACGGCAG‑TTTTTGGATGTATTCAGAACGa < 1:20440519/35‑1 (MQ=255) tGCTGAACGGCAG‑TTTTTGGATGTATTCAGAACGa < 1:4020805/35‑1 (MQ=255) tGCTGAACGGCAG‑TTTTTGGATGTATTCAGAACGa < 1:17492731/35‑1 (MQ=255) gCTGAACGGCAG‑TTTTTGGATGTATTCAGAACGAt < 1:2153040/35‑1 (MQ=255) gCTGAACGGCAG‑TTTTTGGATGTATTCAGAACGAt < 1:12833221/35‑1 (MQ=255) cTGAACGGCAG‑TTTTTGGATGTATTCAGAACGATc < 1:10195758/35‑1 (MQ=255) tGAACGGCAG‑TTTTTGGATGTATTCAGAACGATcc < 1:2341593/35‑1 (MQ=255) tGAACGGCAG‑TTTTTGGATGTATTCAGAACGATcc < 1:17640136/35‑1 (MQ=255) tGAACGGCAG‑TTTTTGGATGTATTCAGAACGATcc < 1:14496857/35‑1 (MQ=255) tGAACGGCAG‑TTTTTGGATGTATTCAGAACGATcc < 1:1665225/35‑1 (MQ=255) gAACGGCAG‑TTTTTGGATGTATTCAGAACGATCCg < 1:8426423/35‑1 (MQ=255) gAACGGCAG‑TTTTTGGATGTATTCAGAACGATCCg < 1:16902545/35‑1 (MQ=255) gAACGGCAG‑TTTTTGGATGTATTCAGAACGATCCg < 1:18328841/35‑1 (MQ=255) gAACGGCAG‑TTTTTGGATGTATTCAGAACGATCCg < 1:5315279/35‑1 (MQ=255) gAACGGCAG‑TTTTTGGATGTATTCAGAACGATCCg < 1:1921653/35‑1 (MQ=255) aaCGGCAG‑TTTTTGGATGTATTCCGAACGATCCgg < 1:1390357/35‑1 (MQ=255) aaCGGCAG‑TTTTTGGATGTATTCAGAACGATCCgg < 1:10430538/35‑1 (MQ=255) aaCGGCAG‑TTTTTGGATGTATTCAGAACGATCCgg < 1:19203076/35‑1 (MQ=255) aCGGCAG‑TTTTTGGATGTATTCAGAACGATCCggg < 1:18856880/35‑1 (MQ=255) aCGGCAG‑TTTTTGGATGTATTCAGAACGATCCggg < 1:7101879/35‑1 (MQ=255) aCGGCAG‑TTTTTGGATGTATTCAGAACGATCCggg < 1:5706880/35‑1 (MQ=255) cGGCAG‑TTTTTGGATGTATTCAGAACGATCCGGGc < 1:19572268/35‑1 (MQ=255) ggCAG‑TTTTTGGATGTATTCAGAACGATCCGGGCt < 1:13494147/35‑1 (MQ=255) ggCAG‑TTTTTGGATGTATTCAGAACGATCCGGGCt < 1:1462916/35‑1 (MQ=255) gCAG‑TTTTTGGATGTATTCAGAACGATCCGGGCTc > 1:10317723/1‑35 (MQ=255) gCAG‑TTTTTGGATGTATTCAGAACGATCCGGGCTc < 1:1351108/35‑1 (MQ=255) cAG‑TTTTTGGATGTATTCAGAACGATCCGGGCTCa > 1:14041652/1‑35 (MQ=255) cAG‑TTTTTGGATGTATTCAGAACGATCCGGGCTCa > 1:2878989/1‑35 (MQ=255) aG‑TTTTTGGATGTATTCAGAACGATCCGGGCTCAg < 1:14244266/35‑1 (MQ=255) aG‑TTTTTGGATGTATTCAGAACGATCCGGGCTCAg > 1:15008550/1‑35 (MQ=255) aG‑TTTTTGGATGTATTCAGAACGATCCGGGCTCAg > 1:15678195/1‑35 (MQ=255) g‑TTTTTGGATGTATTCAGAACGATCCGGGCTCAgg < 1:5117478/35‑1 (MQ=255) g‑TTTTTGGATGTATTCAGAACGATCCGGGCTCAgg < 1:13574785/35‑1 (MQ=255) g‑TTTTTGGATGTATTCAGAACGATCCGGGCTCAgg < 1:1766749/35‑1 (MQ=255) | CGCACGGCATGAACGTCATCTTTGCTGAACGGCAG‑TTTTTGGATGTATTCAGAACGATCCGGGCTCAGG > REL606/3947049‑3947117 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |