New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 473904 | 87 (0.850) | 42 (0.540) | 6/36 | NT | 41.1% | coding (1402/1677 nt) | ybaL | predicted transporter with NAD(P)‑binding Rossmann‑fold domain |
? | REL606 | = 1923465 | 55 (0.710) | coding (662/1011 nt) | ruvB | Holliday junction DNA helicase B |
Only 100 of 210 total aligned reads displayed.
AGATGCGCCAGTTGCATAATTTCTTCGTTCGC‑‑CGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGC > REL606/473870‑473938 | aGATGCGCCAGTTTCATAATTTCTTCGTTCGC‑‑CGC > 1:8126251‑M1/1‑35 (MQ=255) gaggcgccagTTGCATAATTTCTTCGTTCGC‑‑CGCg < 1:19884018‑M1/32‑2 (MQ=255) gATGCGCCAGTTGCATAATTTCTTCGTTCGC‑‑CGCg < 1:14577769‑M1/35‑2 (MQ=255) gATGCGCCAGTTGCATAATTTCTTCGTTCGC‑‑CGCg < 1:19566846‑M1/35‑2 (MQ=255) aTGCGCCAGTTGCATAATTTCTTCGTTCGC‑‑CGCgc > 1:20561706‑M1/1‑33 (MQ=255) aTGCGCCAGTTGCATAATTTCTTCGTTCGC‑‑CGCgc > 1:11376272‑M1/1‑33 (MQ=255) aTGCGCCAGTTGCATAATTTCTTCGTTCGC‑‑CGCgc > 1:16704037‑M1/1‑33 (MQ=255) aTGCGCCAGTTGCATAATTTCTTCGTTCGC‑‑CGCgc > 1:622514‑M1/1‑33 (MQ=255) aTGCGCCAGTTGCATAATTTCTTCGTTCGC‑‑CGCAt < 1:8351687/35‑1 (MQ=255) aTGCGCCAGTTGCATAATTTCTTCGTTCGC‑‑CGCAt > 1:4457490/1‑35 (MQ=255) tGCGCCAGTTGCATAATTTCTTCGTTCGC‑‑CGCgca < 1:12109623‑M1/35‑4 (MQ=255) gcgcCAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcat < 1:2536497‑M1/35‑5 (MQ=255) cgcCAGTTGCATAATTTCTTCGTTCGC‑‑CGCATTGc < 1:9247923/35‑1 (MQ=255) gcCAGTTGCATAATTTCTTCGTTCGC‑‑GGCgcattg < 1:16823223‑M1/35‑7 (MQ=255) gcCAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattg < 1:13887884‑M1/35‑7 (MQ=255) gcCAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattg > 1:16045058‑M1/1‑29 (MQ=255) gcCAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattg < 1:3909573‑M1/35‑7 (MQ=255) gcCAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattg > 1:12601666‑M1/1‑29 (MQ=255) gcCAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattg > 1:11049635‑M1/1‑29 (MQ=255) gcCAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattg > 1:18204737‑M1/1‑29 (MQ=255) ccAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattgc < 1:6301406‑M1/35‑8 (MQ=255) ccAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattgc > 1:11666950‑M1/1‑28 (MQ=255) cAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattgcc < 1:948228‑M1/35‑9 (MQ=255) cAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattgcc < 1:7805302‑M1/35‑9 (MQ=255) cAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattgcc > 1:6170677‑M1/1‑27 (MQ=255) cAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattgcc > 1:20040315‑M1/1‑27 (MQ=255) cAGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattgcc > 1:13491868‑M1/1‑27 (MQ=255) aGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattgccc > 1:1024742‑M1/1‑26 (MQ=255) aGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattgccc < 1:17589770‑M1/35‑10 (MQ=255) aGTTGCATAATTTCTTCGTTCGC‑‑CGCgcattgccc < 1:16771071‑M1/35‑10 (MQ=255) ttGCATAATTTCTTCGTTCGC‑‑CGCgcattgcccaa > 1:5813837‑M1/1‑24 (MQ=255) tGCATAATTTCTTCGTTCGCCGCGCATTGCCCAAt > 1:1971495/1‑35 (MQ=21) tGCATAATTTCTTCGTTCGCCGCGCATTGCCCAAt > 1:8716082/1‑35 (MQ=21) tGCATAATTTCTTCGTTCGCCGCGCATTGCCCAAt > 1:11383328/1‑35 (MQ=21) tGCATAATTTCTTCGTTCGCCGCGCATTGCCCAAt > 1:17051941/1‑35 (MQ=21) tGCATAATTTCTTCGTTCGCCGCGCATTGCCCAAt < 1:1248537/35‑1 (MQ=21) tGCATAATTTCTTCGTTCGCCGCGCATTGCCCAAt > 1:4586943/1‑35 (MQ=21) tGCATAATTTCTTCGTTCGCCGCGCATTGCCCAAt > 1:5560615/1‑35 (MQ=21) tGCATAATTTCTTCGTTCGCCGCGCATTGCCCAAt < 1:640921/35‑1 (MQ=21) tGCATAATTTCTTCGTTCGCAGCGCATTGCCCAAt < 1:3265608/35‑1 (MQ=25) nncNTNNTTTCTTCGTTCGCCGCGCATTGCCCAAt < 1:8216328/33‑1 (MQ=12) gCATAATTTCTTCGTTCGCCGCGCATTGCCCAATa > 1:12940357/1‑35 (MQ=21) gCATAATTTCTTCGTTCGCCGCGCATTGCCCAATa < 1:18128605/35‑1 (MQ=21) cATAATTTCTTCGTTCGCCGCGCATTGCCCAATAc > 1:2642220/1‑35 (MQ=21) cATAATTTCTTCGTTCGCCGCGCATTGCCCAATAc < 1:7647059/35‑1 (MQ=21) cATAATTTCTTCGTTCGCCGCGCATTGCCCAATAc > 1:6528868/1‑35 (MQ=21) cATAATTTCTTCGTTCGCCGCGCATTGCCCAATAc < 1:9800110/35‑1 (MQ=21) cATAATTTCTTCGTTCGCCGCGCATTGCCCAATAc < 1:10386838/35‑1 (MQ=21) cATAATTTCTTCGTTCGCCGCGCATTGCACAATan < 1:20319554/35‑2 (MQ=16) aTAATTTCTTCGTTCGCCGCGCATTGCCCAATACt > 1:10172976/1‑35 (MQ=21) aTAATTTCTTCGTTCGCCGCGCATTGCCCAATACt < 1:3911838/35‑1 (MQ=21) tAATTTCTTCGTTCGCCGCGCATTGCCCAATACTg < 1:5966075/35‑1 (MQ=21) tAATTTCTTCGTTCGCCGCGCATTGCCCAATACTg < 1:15217064/35‑1 (MQ=21) tAATTTCTTCGTTCGCCGCGCATTGCCCAATACTg > 1:7017405/1‑35 (MQ=21) tAATTTCTTCGTTCGCCGCGCATTGCCCAATACTg < 1:1426862/35‑1 (MQ=21) tAATTTCTTCGTTCGCCGCGCATTGCCCAATACTg > 1:5683721/1‑35 (MQ=21) tAATTTCTTCGTTCGCCGCGCATTGCCAAATACTg < 1:13121349/35‑1 (MQ=12) tAATTTCTTCGTTCGC‑‑CGCATTGCCCAATACTgcg > 1:5877528/1‑35 (MQ=255) aaTTTCTTCGTTCGCCGCGCATTGCCCAATACTgc > 1:285157/1‑35 (MQ=21) aaTTTCTTCGTTCGCCGCGCATTGCCCAATACTgc < 1:17270186/35‑1 (MQ=21) aaTTTCTTCGTTCGCCGCGCATTGCCCAATACTgc < 1:2285936/35‑1 (MQ=21) aaTTTCTTCGTTCGCCGCGCATTGCCAAATACTgc < 1:20247175/35‑1 (MQ=12) aTTTCTTCGTTCGCCGCGCATTGCCCAATACTgcg > 1:14903721/1‑35 (MQ=21) tttCTTCGTTCGCCGCGCATTGCCCAATACTgcgc < 1:10979943/35‑1 (MQ=21) tttCTTCGTTCGCCGCGCATTGCCCAATACTgcgc < 1:4191422/35‑1 (MQ=21) ttcttcGTTCGCCGCGCATTGCCCAATACTGcgcg < 1:17882356/35‑1 (MQ=21) tcttcGTTCGCCGCGCATTGCCCAATACTGCGCgg < 1:15565591/35‑1 (MQ=21) cttcGTTCGCCGCGCATTGCCCAATACTGCGCGGa < 1:14071038/35‑1 (MQ=21) ttcgttcgCCGCGCATTGCCCAATACTGCGCGGAc > 1:5433473/1‑35 (MQ=21) ttcgttcgCCGCGCATTGCCCAATACTGCGCGGAc < 1:16960511/35‑1 (MQ=21) ttcgttcgCCGCGCATTGCCCAATACTGCGCGGAc < 1:10028700/35‑1 (MQ=21) tcgttcgCCGCGCATTGCCCAATACTGCGCTGAcc > 1:15964/1‑35 (MQ=16) tcgttcgCCGCGCATTGCCCAATACTGCGCGGAcc < 1:19314039/35‑1 (MQ=21) tcgttcgCCGCGCATTGCCCAATACTGCGCGGAcc < 1:1659114/35‑1 (MQ=21) tcgttcgC‑‑CGCATTGCCCAATACTGCGGGGAcccc > 1:861980/1‑35 (MQ=255) tccgc‑‑cgcgcattgccaaccgtctgctgcgtcgag < 1:3444995‑M1/33‑28 (MQ=255) cgc‑‑cgcgcattgccaaccgtctgctgcgtcgagtg > 1:19216754‑M1/1‑6 (MQ=255) cgc‑‑cgcgcattgccaaccgtctgctgcgtcgagtg < 1:10240782‑M1/35‑30 (MQ=255) cgc‑‑cgcgcattgccaaccgtctgctgcgtcgagtg < 1:15828005‑M1/35‑30 (MQ=255) cgc‑‑cgcgcattgccaaccgtctgctgcgtcgagtg > 1:2036906‑M1/1‑6 (MQ=255) ccc‑‑cgcgcattgccaaccgtctgctgcgtcgagtg < 1:13554013‑M1/33‑30 (MQ=255) gc‑‑cgcgcattgccaaccgtctgctgcgtcgagtgc > 1:16535902‑M1/1‑5 (MQ=255) gc‑‑cgcgcattgccaaccgtctgctgcgtcgagtgc < 1:16615536‑M1/35‑31 (MQ=255) c‑‑cgcgcattgccaaccgtctgctgcgtcgagtgcg > 1:6861025‑M1/1‑4 (MQ=255) cgcgcATTGCCCAATACTGCGCGGACCCCGCGctc > 1:753977/3‑35 (MQ=255) gcgcATTGCCCAATACTGCGCGGACCCCGCGctct > 1:13842225/2‑35 (MQ=255) gcgcATTGCCCAATACTGCGCGGACCCCGCGctct > 1:4726829/2‑35 (MQ=255) gcgcATTGCCCAATACTGCGCGGACCCCGCGctct > 1:5341458/2‑35 (MQ=255) cgcgcattgccaaccgtctgctgcgtcgagtgctt > 1:5153063‑M1/1‑3 (MQ=255) cgcgcattgccaaccgtctgctgcgtcgagtgcgt < 1:4098565‑M1/35‑33 (MQ=255) cgcgcattgccaaccgtctgctgcgtcgagtgcgt < 1:20179673‑M1/35‑33 (MQ=255) cgcATTGCCCAATACTGCGCGGACCCCGCGCtctc > 1:13638545/1‑35 (MQ=255) cgcATTGCCCAATACTGCGCGGACCCCGCGCtctc < 1:8183313/35‑1 (MQ=255) gcgcattgccaaccgtctgctgcgtcgagtgcgtg > 1:7716244‑M1/1‑2 (MQ=255) gcgcattgccaaccgtctgctgcgtcgagtgcgtg > 1:9647125‑M1/1‑2 (MQ=255) gcATTGCCCAATACTGCGCGGACCCCGCGCTCTCg < 1:7323638/35‑1 (MQ=255) gcATTGCCCAATACTGCGCGGACCCCGCGCTCTCg > 1:19038751/1‑35 (MQ=255) ccgcattgccaaccgtctgctgcgtcgagtgcgtg < 1:20099734‑M1/34‑34 (MQ=255) cgcattgccaaccgtctgctgcgtcgagtgcgtga > 1:17668040‑M1/1‑1 (MQ=255) cATTGCCCAATACTGCGCGGACCCCGCGCTCTCGc > 1:16093583/1‑35 (MQ=255) | AGATGCGCCAGTTGCATAATTTCTTCGTTCGC‑‑CGCATTGCCCAATACTGCGCGGACCCCGCGCTCTCGC > REL606/473870‑473938 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |