Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 4,613,019 +TT :: IS150 (+) 100% intergenic (‑16/‑91) smp ← / → serB hypothetical protein/3‑phosphoserine phosphatase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 664686 =NA (NA)139 (1.350) 45/48 NT 100% intergenic (‑77/‑49) gltL/insJ‑2 ATP‑binding protein of glutamate/aspartate transport system; b0652_1/IS150 hypothetical protein
?REL606 = 4613019 0 (0.000)intergenic (‑16/‑90) smp/serB hypothetical protein/3‑phosphoserine phosphatase
* ? REL606 = 3894996NA (NA)114 (1.160) 38/46 NT 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 4613020 = 0 (0.000)intergenic (‑17/‑89) smp/serB hypothetical protein/3‑phosphoserine phosphatase

Only 100 of 147 total aligned reads displayed.

GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/3894963‑3894996
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aATTTGAGACTTAATGTTGCCAGAAGCAATGGATA  >  REL606/4613020‑4613053
                                                                    
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTAAAA                                   <  1:10295877/35‑1
    TTAACTGTCCAACTTTTTGGGGTCAGTACAATTTG                               >  1:15514990/1‑35
    TTAACTGTCCAACTTTTTGGGGTCAGTACAATTTG                               >  1:2410352/1‑35
    TTAACTGTCCAACTTTTTGGGGTCAGTACAATTTG                               >  1:15730490/1‑35
    TTAACTGTCCAACTTTTTGGGGTCAGTACAATTTG                               <  1:19500010/35‑1
     TAACTGTCCAACTTTTTGGGGTCAGTACAATTTGA                              >  1:20123980/1‑35
     TAACTGTCCAACTTTTTGGGGTCAGTACAATTTGA                              <  1:2624284/35‑1
     TAACTGTCCAACTTTTTGGGGTCAGTACAATTTGA                              >  1:3195388/1‑35
     TAACTGTCCAACTTTTTGGGGTCAGTACAATTTGA                              >  1:3658162/1‑35
      aaaTGTCCAACTTTTTGGGGTCAGTACAATTTGAG                             <  1:11808744/32‑1
      AACTGTCCAACTTTTTGGGGTCAGTACAATTTGAG                             >  1:5918453/1‑35
      AACTGTCCAACTTTTTGGGGTCAGTACAATTTGAG                             >  1:17714342/1‑35
       ACTGTCCAACTTTTTGGGGTCAGTACAATTTGAGA                            <  1:18793174/35‑1
       ACTGTCCAACTTTTTGGGGTCAGTACAATTTGAGA                            >  1:15047015/1‑35
       ACTGTCCAACTTTTTGGGGTCAGTACAATTTGAGA                            <  1:16844395/35‑1
        CTGTCCAACTTTTTGGGGTCAGTACAATTTGAGAC                           >  1:19453777/1‑35
         TGTCCAACTTTTTGGGGTCAGTACAATTTGAGACT                          <  1:19183500/35‑1
         TGTCCAACTTTTTGGGGTCAGTACAATTTGAGACT                          >  1:18914345/1‑35
         TGTCCAACTTTTTGGGGTCAGTACAATTTGAGACT                          <  1:9472780/35‑1
         TGTCCAACTTTTTGGGGTCAGTACAATTTGAGACT                          <  1:20442251/35‑1
         TGTCCAACTTTTTGGGGTCAGTACAATTTGAGACT                          >  1:8397605/1‑35
          GTCCAACTTTTTTGGGTCAGTACAATTTGAGACTT                         >  1:878966/1‑35
           TCCAACTTTTTGGGGTCAGTACAATTTGAGACTTA                        >  1:16619529/1‑35
            CCAACTTTTTGGGGTCAGTACAATTTGAGACTTAA                       >  1:12307924/1‑35
            CCAACTTTTTGGGGTCAGTACAATTTGAGACTTAA                       >  1:3393738/1‑35
            CCAACTTTTTGGGGTCAGTACAATTTGAGACTTAA                       >  1:2612387/1‑35
            CCAACTTTTTGGGGTCAGTACAATTTGAGACTTAA                       <  1:1404276/35‑1
            CCAACTTTTTGGGGTCAGTACAATTTGAGACTTAA                       >  1:6403461/1‑35
             CAACTTTTTGGGGTCAGTACAATTTGAGACTTAAT                      <  1:14706938/35‑1
             CAACTTTTTGGGGTCAGTACAATTTGAGACTTAAT                      <  1:3018392/35‑1
             CAACTTTTTGGGGTCAGTACAATTTGAGACTTAAT                      <  1:8264975/35‑1
             CAACTTTTTGGGGTCAGTACAATTTGAGACTTAAT                      <  1:10425938/35‑1
              AACTTTTTGGGGTCAGTACAATTTGAGACTTAATG                     >  1:13420126/1‑35
              AACTTTTTGGGGTCAGTACAATTTGAGACTTAATG                     <  1:11857102/35‑1
              AACTTTTTGGGGTCAGTACAATTTGAGACTTAATG                     >  1:451701/1‑35
              AACTTTTTGGGGTCAGTACAATTTGAGACTTAATG                     <  1:5694321/35‑1
               ACTTTTTTGGGTCAGTACAATTTGAGACTTAATGT                    >  1:13565287/1‑35
               ACTTTTTGGGGTCAGTACAATTTGAGACTTAATGT                    <  1:15270727/35‑1
               ACTTTTTGGGGTCAGTACAATTTGAGACTTAATGT                    >  1:18050298/1‑35
                CTTTTTGGGGTCAGTACAATTTGAGACTTAATGTT                   <  1:2520080/35‑1
                 TTTTTGGGGTCAGTACAATTTGAGACTTAATGTTG                  <  1:19462152/35‑1
                 TTTTTGGGGTCAGTACAATTTGAGACTTAATGTTG                  >  1:11473915/1‑35
                 TTTTTGGGGTCAGTACAATTTGAGACTTAATGTTG                  <  1:19264435/35‑1
                  TTTTGGGGTCAGTACAATTTGAGACTTAATGTTGC                 >  1:18733452/1‑35
                  TTTTGGGGTCAGTACAATTTGAGACTTAATGTTGC                 >  1:4814339/1‑35
                  TTTTGGGGTCAGTACAATTTGAGACTTAATGTTGC                 >  1:19355150/1‑35
                  TTTTGGGGTCAGTACAATTTGAGACTTAATGTTGC                 <  1:18590798/35‑1
                  TTTTGGGGTCAGTACAATTTGAGACTTAATGTTGC                 >  1:12442020/1‑35
                    TTGGGGTCAGTACAATTTGAGACTTAATGTTGCCA               >  1:12137539/1‑35
                    TTGGGGTCAGTACAATTTGAGACTTAATGTTGCCA               >  1:12209106/1‑35
                     TGGGGTCAGTACAATTTTAGACTTAATGTTGCCAG              >  1:15914631/1‑35
                     TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG              >  1:18154547/1‑35
                     TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG              <  1:8381496/35‑1
                     TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG              >  1:737344/1‑35
                     TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG              <  1:4687073/35‑1
                     TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG              <  1:18336024/35‑1
                     TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG              <  1:20294467/35‑1
                     TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG              >  1:20490649/1‑35
                      GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA             <  1:18323099/35‑1
                      GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA             >  1:12466399/1‑35
                      GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA             >  1:6930410/1‑35
                      GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA             <  1:13293452/35‑1
                      GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA             >  1:1463927/1‑35
                      GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA             >  1:4767571/1‑35
                      GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA             >  1:9546254/1‑35
                       GGGTCAGTACAATTTGAGACTTAATGTTGCCAGAA            >  1:6229623/1‑35
                       GGGTCAGTACAATTTGAGACTTAATGTTGCCAGAA            >  1:11275088/1‑35
                       GGGTCAGTACAATTTGAGACTTAATGTTGCCAGAA            >  1:17673389/1‑35
                        GGTCAGTACAATTTGAGACTTAATTTTGCCAGAAG           >  1:11388496/1‑35
                        GGTCAGTACAATTTGAGACTTAATGTTGCCAGAAG           <  1:5552382/35‑1
                        GGTCAGTACAATTTGAGACTTAATGTTGCCAGAAG           <  1:15239159/35‑1
                         nTCAGTACAATTTGAGACTTAATGTTGCCAGAAGC          >  1:20113342/2‑35
                         GTCAGTACAATTTGAGACTTAATGTTGCCAGAAGC          <  1:7243409/35‑1
                         GTCAGTACAATTTGAGACTTAATGTTGCCAGAAGC          >  1:11355578/1‑35
                         GTCAGTACAATTTGAGACTTAATGTTGCCAGAAGC          >  1:8229788/1‑35
                         GTCAGTACAATTTGAGACTTAATGTTGCCAGAAGC          <  1:9202841/35‑1
                          TCAGTACAATTTGAGACTTAGTGTTGCCAGAAGCA         <  1:19754345/35‑1
                          TCAGTACAATTTGAGACTTAATGTTGCCAGAAGCA         <  1:17304971/35‑1
                           CAGTACAATTTGAGACTTAATGTTGCCATAAGCAA        >  1:7314219/1‑35
                           CAGTACAATTTGAGACTTAATGTTGCCAGAATCAA        >  1:10272897/1‑35
                           CAGTACAATTTGAGACTTAATGTTGCCAGAAGCAA        >  1:10891733/1‑35
                           CAGTACAATTTGAGACTTAATGTTGCCAGAAGCAA        >  1:4738853/1‑35
                           CAGTACAATTTGAGACTTAATGTTGCCAGAAGCAA        >  1:13287058/1‑35
                           CAGTACAATTTGAGACTTAATGTTGCCAGAAGCAA        >  1:20309032/1‑35
                           CAGTACAATTTGAGACTTAATGTTGCCAGAAGCAA        <  1:18028091/35‑1
                           CAGTACAATTTGAGAATTAATGTTGCCAGAAGCAA        >  1:5382088/1‑35
                            AGTACAATTTGAGACTTAATGTTGCCAGAAGCAAT       >  1:6079688/1‑35
                            AGTACAATTTGAGACTTAATGTTGCCAGAAGCAAT       >  1:11480336/1‑35
                            AGTACAATTTGAGACTTAATGTTGCCAGAAGCAAT       <  1:14256386/35‑1
                            AGTACAATTTGAGACTTAATGTTGCCAGAAGCAAT       <  1:16256533/35‑1
                               ACAATTTGAGACTTAATGTTGCCAGAAGCAATGGA    >  1:8691997/1‑35
                               ACAATTTGAGACTTAATGTTGCCAGAAGCAATGGA    >  1:96387/1‑35
                               ACAATTTGAGACTTAATGTTGCCAGAAGCAATGGA    >  1:10409626/1‑35
                               ACAATTTGAGACTTAATGTTGCAAGAAGCAATGGA    <  1:3954488/35‑1
                                CAATTTGAGACTTAATGTTGCCAGAAGCAATGGAT   >  1:6007948/1‑35
                                CAATTTGAGACTTAATGTTGCCAGAAGCAATGGAT   <  1:19178841/35‑1
                                CAATTTGAGACTTAATGTTGCCAGAAGCAATGGAT   >  1:17824440/1‑35
                                 AATTTGAGACTTAATGTTGCCAGAAGCAATGGATA  >  1:19762021/1‑35
                                 AATTTGAGACTTAATGTTGCCAGAAGCAATGGATA  >  1:17221339/1‑35
                                 AATTTGAGACTTAATGTTGCCAGAAGCAATGGATA  <  1:10149541/35‑1
                                                                    
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/3894963‑3894996
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aATTTGAGACTTAATGTTGCCAGAAGCAATGGATA  >  REL606/4613020‑4613053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.