New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1133033 = | 122 (1.190) | 8 (0.100) | 3/38 | NT | 9.4% | coding (13/576 nt) | yceI | hypothetical protein |
? | REL606 | = 2612120 | 57 (0.700) | intergenic (‑323/+253) | yfhK/purL | predicted sensory kinase in two‑component system/phosphoribosylformylglycinamidine synthase |
CGTCATCTGACTATGGAGTATAAAAAATGAAAAAAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1133071‑1133033 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagccATAAATCCCTCAAAGCAACGTATAATCAGTACGT < REL606/2612120‑2612087 CGTCATCTGACTATGGAGTATAAAAAATGAAAAAA < 1:14143775/35‑1 GTCATCTGACTATGGAGTATAAAAACTGAAAAAAc > 1:8510847/1‑34 GTCATCTGACTATGGAGTATAAAAAATGAAAAAAA > 1:7556145/1‑35 GTCATCTGACTATGGAGTATAAAAAATGAAAAAAA < 1:12481173/35‑1 TCATCTGACTATGGAGTATAAAAAATGAAAAAAAG > 1:19829965/1‑35 TCATCTGACTATGGAGTATAAAAAATGAAAAAAAG > 1:2268510/1‑35 TCATCTGACTATGGAGTATAAAAAATGAAAAAAAG > 1:14910757/1‑35 TCATCTGACTATGGAGTATAAAAAATGAAAAAAAG > 1:17071930/1‑35 TCATCTGACTATGGAGTATAAAAAATGAAAAAAAG < 1:13355973/35‑1 CATCTGACTATGGAGTATAAAAAATGAAAAAAAGC > 1:1343310/1‑35 CATCTGACTATGGAGTATAAAAAATGAAAAAAAGC < 1:5157626/35‑1 ATCTGACTATGGAGTATAAAAAATGAAAAAAAGCC < 1:5160722/35‑1 ATCTGACTATGGAGTATAAAAAATGAAAAAAAGCC > 1:9214216/1‑35 ATCTGACTATGGAGTATAAAAAATGAAAAAAAGCC < 1:17201071/35‑1 AAAAAAGAAAAAAAGCCATAAATCCCTCAAAGCAA < 1:6609305/35‑1 AAAAGGAAAAAAAGCCATAAATCCCTCAAAGCAAC < 1:3636938/35‑1 AAAAAGAAAAAAAGCCATAAATCCCTCAAAGCAAC < 1:11508052/35‑1 aaGAAAAAAAGCCATAAATCCCTCAAAGCAACGTA < 1:12889428/33‑1 aGAAAAAAAGCCATAAATCCCTCAAAGCAACGTAT < 1:3955828/34‑1 aGAAAAAAAGCCATAAATCCCTCAAAGCAACGTAT < 1:10856486/34‑1 aGAAAAAAAGCCATAAATCCCTCAAAGCAACGTAT < 1:722542/34‑1 aAAAAAAAGCCATAAATCCCTCAAAGCAACGTATA < 1:8526495/34‑1 GAAAAAAAGCCATAAATCCCTCAAAGCAACGTATA < 1:5592737/35‑1 AAAAAAAGCCATAAATCCCTCAAAGCAACGTATAA < 1:13190845/35‑1 AAAAAAAGCCATAAATCCCTCAAAGCAACGTATAA < 1:13729719/35‑1 AAAAAGCCATAAATCCCTCAAAGCAACGTATAATC < 1:7326927/35‑1 AAAGCCATAAATCCCTCAAAGCAACGTATAATCAG < 1:6413201/35‑1 AAAGCCATAAATCCCTCAAAGCAACGTATAATCAG < 1:14744496/35‑1 AAAGCCATAAATCCCTCAAAGCAACGTATAATCAG < 1:9495571/35‑1 AAAGCCATAAATCCCTAAAAGCAACGTATAATCAG < 1:6205739/35‑1 AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT < 1:19155858/35‑1 AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT < 1:19197076/35‑1 AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT > 1:7545855/1‑35 AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT > 1:16752180/1‑35 AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT > 1:19992392/1‑35 AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT > 1:5782754/1‑35 AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT > 1:6948455/1‑35 AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT < 1:2068319/35‑1 AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT > 1:12408233/1‑35 AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT < 1:13174201/35‑1 AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT > 1:3216431/1‑35 AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT < 1:13494436/35‑1 AGCCATAAATCCCTCAAAGCAACGTATAATCAGTA < 1:12957898/35‑1 AGCCATAAATCCCTCAAAGCAACGTATAATCAGTA > 1:15156338/1‑35 AGCCATAAATCCCTCAAAGCAACGTATAATCAGTA > 1:16309802/1‑35 GCCATAAATCCCTCAAAGCAACGTATAATCAGTAC > 1:896488/1‑35 GCCATAAATCCCTCAAAGCAACGTATAATCAGTAC < 1:487955/35‑1 GCCATAAATCCCTCAAAGCAACGTATAATCAGTAC < 1:15397599/35‑1 GCCATAAATCCCTCAAAGCAACGTATAATCAGTAC < 1:8219795/35‑1 CCATAAATCCCTCAAAGCAACGTATAATCAGTACG > 1:9400984/1‑35 CCATAAATCCCTCAAAGCAACGTATAATCAGTACG < 1:2407421/35‑1 CCATAAATCCCTCAAAGCAACGTATAATCAGTACG > 1:19586340/1‑35 CCATAAATCCCTCAAAGCAACGTATAATCAGTACG > 1:1752569/1‑35 CCATAAATCCCTCAAAGCAACGTATAATCAGTACG > 1:16990093/1‑35 CCATAAATCCCTCAAAGCAACGTATAATCAGTACG < 1:15737597/35‑1 CCATAAATCCCTCAAAGCAACGTATAATCAGTACG > 1:12842782/1‑35 CCATAAATCCCTCAAAGCAACGTATAATCAGTACG < 1:10952557/35‑1 CCATAAATCCCTCAAAGCAACGTATAATCAGTACG > 1:10481415/1‑35 CATAAATCCCTCAAAGCAACGTATAATCAGTACGT < 1:2836218/35‑1 CATAAATCCCTCAAAGCAACGTATAATCAGTACGT < 1:20117649/35‑1 CATAAATCCCTCAAAGCAACGTATAATCAGTACGT < 1:15811912/35‑1 CATAAATCCCTCAAAGCAACGTATAATCAGTACGT < 1:15036953/35‑1 CATAAATCCCTCAAAGCAACGTATAATCAGTACGT > 1:13247454/1‑35 CATAAATACCTCAAAGCAACGTATAATCAGTACGT < 1:20202323/35‑1 CGTCATCTGACTATGGAGTATAAAAAATGAAAAAAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1133071‑1133033 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagccATAAATCCCTCAAAGCAACGTATAATCAGTACGT < REL606/2612120‑2612087 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |