New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 957480 = | 61 (0.590) | 11 (0.150) | 3/34 | NT | 20.1% | coding (960/1293 nt) | serS | seryl‑tRNA synthetase |
? | REL606 | = 3467034 | 44 (0.600) | coding (963/2319 nt) | yhgF | predicted transcriptional accessory protein |
Only 100 of 137 total aligned reads displayed.
CTGGTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCACTGGCG > REL606/957446‑957514 | tgcccgtaacctgcacgatctgctgatggcggccc > 1:6481313‑M1/35‑35 (MQ=255) tgcccgtaacctgcacgatctgctgatggcggccc > 1:16508302‑M1/35‑35 (MQ=255) cTGGTCATGCAGAAAAAGTCCTGCAGTTGCTGGGc > 1:10246712/1‑35 (MQ=255) tGGTCATGCAGAAAAAGTCCTGCAGTTGCTGGGcc > 1:7563044/1‑35 (MQ=255) gcccgtaacctgcacgatctgctgatggcggcccc > 1:6677603‑M1/34‑35 (MQ=255) gcccgtaacctgcacgatctgctgatggcggcccc < 1:13640429‑M1/2‑1 (MQ=255) ggTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCt > 1:18767959/1‑35 (MQ=255) ggTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCt < 1:11970132/35‑1 (MQ=255) ggTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCt < 1:12379085/35‑1 (MQ=255) ggTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCt < 1:16414591/35‑1 (MQ=255) cccgtaacctgcacgatctgctgatggcgggcccc < 1:10090166‑M1/3‑2 (MQ=255) cccgtaacctgcacgatctgctgatggcggccCCt > 1:19872111‑M1/33‑35 (MQ=255) cccgtaacctgcacgatctgctgatggcggccCCt > 1:16760381‑M1/33‑35 (MQ=255) gTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTg < 1:5967897/35‑1 (MQ=255) ccgtaacctgcacgatctgctgatggcggcccccg < 1:7678820‑M1/4‑3 (MQ=255) ccgtaacctgcacgatctgctgatggcggccCCTg > 1:14336147‑M1/32‑35 (MQ=255) cagtaacctgcacgatctgctgatggcggccCCTg > 1:14346288‑M1/32‑35 (MQ=255) tCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGc > 1:14378387/1‑35 (MQ=255) tCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGc > 1:19449611/1‑35 (MQ=255) tCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGc < 1:8286092/35‑1 (MQ=255) gtaacctgcacgatctgctgatggcggccCCTGcc > 1:16572623‑M1/30‑35 (MQ=255) cATGCATAAAAAGTCCTGCAGTTGCTGGGCCTGcc > 1:18502882/1‑35 (MQ=255) cATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGcc > 1:17157874/1‑35 (MQ=255) taacctgcacgatctgctgatggcggccCCTGccg > 1:5656658‑M1/29‑35 (MQ=255) aTGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGccg > 1:16316256/1‑35 (MQ=255) tGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGccgt > 1:8580565/1‑35 (MQ=255) gCAGAAAAAGTCCTGCAGTTGCTGGGCCTGccgta > 1:15224197/1‑35 (MQ=255) cAGAAAAAGTCCTGCAGTTGCTGGGCCTGccgtac > 1:15422025/1‑35 (MQ=255) aGAAAAAGTCCTGCAGTTGCTGGGCCTGccgtacc > 1:14608181/1‑35 (MQ=255) aGAAAAAGTCCTGCAGTTGCTGGGCCTGccgtacc > 1:16643755/1‑35 (MQ=255) aaaaaGTCCTGCAGTTGCTGGGCCTGccgtaccgt > 1:4072049/1‑35 (MQ=255) aaaaGTCCTGCATTTGCTGGGCCTGccgtaccgta > 1:1942963/1‑35 (MQ=255) aaaaGTCCTGCAGTTGCTGGGCCTGgcgtaccgta > 1:4539349/1‑35 (MQ=255) aaaaGTCCTGCAGTTGCTGGGCCTGccgtaccgta > 1:18421923/1‑35 (MQ=255) aaaaGTCCTGCAGTTGCTGGGCCTGccgtaccgta > 1:11308325/1‑35 (MQ=255) aaaaGTCCTGCAGTTGCTGGGCCTGccgtaccgta > 1:16894135/1‑35 (MQ=255) aaaGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaa > 1:4231008/1‑35 (MQ=255) aaaGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaa > 1:12116035/1‑35 (MQ=255) aaGTCCTGCAGTTGCTGGGCCTGccgtaccgtaga > 1:17703947/1‑33 (MQ=255) aaGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaaa > 1:9656127/1‑35 (MQ=255) aaGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaaa > 1:17716489/1‑35 (MQ=255) aaGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaaa > 1:923847/1‑35 (MQ=255) aaGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaaa > 1:10055642/1‑35 (MQ=255) aGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaaaa > 1:16026350/1‑35 (MQ=255) aGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaaaa > 1:13708521/1‑35 (MQ=255) tCCTGCAGTTGCTGGGCCTGCCGTACCGTAAAatc > 1:1014092/1‑35 (MQ=255) tCCTGCAGTTGCTGGGCCTGCCGTACCGTAAAatc > 1:8954073/1‑35 (MQ=255) ccTGCAGTTGCTGGGCCTGCCGTACCGTAAAatca > 1:8256955/1‑35 (MQ=255) ccTGCAGTTGCTGGGCCTGCAGTACCGTAAAatca < 1:5209627/35‑1 (MQ=255) cTGCAGTTGCTGGGCCTGCCGTACCGTAAAatcat > 1:10827860/1‑35 (MQ=255) cTGCAGTTGCTGGGCCTGCCGTACCGTAAAatcat > 1:13169633/1‑35 (MQ=255) tGCAGTTGCTGGGCCTGCCGTACCGTAAAatcatc > 1:11403151/1‑35 (MQ=255) tGCAGTTGCTGGGCCTGCCGTACCGTAAAatcatc > 1:7730122/1‑35 (MQ=255) tGCAGTTGCTGGGCATGCCGTACCGTAAAatcatc < 1:965755/35‑1 (MQ=255) gCAGTTGCTGGGCCTGCCGTACCGTAAAAACATcc > 1:20006896/1‑35 (MQ=255) cAGTTGCTGGGCCTGCCGTACCGTAAAATCATCCt > 1:10003715/1‑35 (MQ=255) aGTTGCTGGGCCTGCCGTACCGTAAAATCATCCtt > 1:13256789/1‑35 (MQ=255) aGTTGCTGGGCCTGCCGTACCGTAAAATCATCCtt > 1:2140167/1‑35 (MQ=255) aGTTGCTGGGCCTGCCGTACCGTAAAATCATCCtt > 1:6352817/1‑35 (MQ=255) gtgggggccCCTGCCGTACCGTAAAATCATCCttt > 1:1087860‑M1/10‑35 (MQ=255) gtggcgggcCCTGCCGTACCGTAAAATCATCCttt > 1:6469349‑M1/10‑35 (MQ=255) gTTGCTGGGCCTGCCGTACCGTAAAATCATCCttt > 1:6549689/1‑35 (MQ=255) ttGCTGGGCCTGCCGTACCGTAAAATCATCCTTTg > 1:6286895/1‑35 (MQ=255) ttGCTGGGCCTGCCGTACCGTAAAATCATCCTTTg > 1:1730940/1‑35 (MQ=255) tggcggccCCTGCCGTACCGTAAAATCATCCTTTg > 1:808803‑M1/9‑35 (MQ=255) tggcggccCCTGCCGTACCGTAAAATCATCCTTTg > 1:574800‑M1/9‑35 (MQ=255) tgcgggcCCTGCCGTACCGTAAAATCATCCTTTGc > 1:7786850‑M1/8‑35 (MQ=255) ggcggccCCTGCCGTACCGTAAAATCATCCTTTGc > 1:5843004‑M1/8‑35 (MQ=255) gctgccCCTGCCGTACCGTAAAATCATCCTTTGCa > 1:5439144‑M1/7‑35 (MQ=255) gCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCa > 1:19709940/1‑35 (MQ=255) gCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCa > 1:7228655/1‑35 (MQ=255) gCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCa > 1:15595906/1‑35 (MQ=255) gCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCa > 1:2902501/1‑35 (MQ=255) cTGGGCCTGCCGTACCGTAAAATCATCCTTTGCAc > 1:12015333/1‑35 (MQ=255) cTGGGCCTGCCGTACCGTAAAATCATCCTTTGCAc > 1:16007116/1‑35 (MQ=255) cTGGGCCTGCCGTACCGTAAAATCATCCTTTGCAc > 1:8473145/1‑35 (MQ=255) cTGGGCCTGACGTACCGTAAAATCATCCTTTGCAc < 1:6688009/35‑1 (MQ=255) tggcCCTGCCGTACCGTAAAATCATCCTTTGCACt > 1:10910113‑M1/5‑35 (MQ=255) tGGGCCTGCCGTACCGTAAAATCATCCTTTGCACt > 1:10244831/1‑35 (MQ=255) tGGGCCTGCCGTACCGTAAAATCATCCTTTGCACt > 1:14075640/1‑35 (MQ=255) ggccCCTGCCGTACCGTAAAATAATCCTTTGCACt > 1:2268640‑M1/5‑35 (MQ=255) gtgCCTGCCGTACCGTAAAATCATCCTTTGCACTg < 1:8157236/33‑1 (MQ=255) gggCCTGCCGTACCGTAAAATCATCCTTTGCACTg > 1:2927071/1‑35 (MQ=255) gggCCTGCCGTACCGTAAAATCATCCTTTGCACTg > 1:19484392/1‑35 (MQ=255) gggCCTGCCGTACCGTAAAATCATCCTTTGCACTg > 1:12798383/1‑35 (MQ=255) gggCCTGCCGTACCGTAAAATCATCCTTTGCACTg > 1:18448571/1‑35 (MQ=255) ggcCCTGCCGTACCGTAAAATCATCCTTTGCACTg > 1:4567363‑M1/4‑35 (MQ=255) gccCCTGCCGTACCGTAAAATCATCCTTTGCACTg > 1:14960093‑M1/4‑35 (MQ=255) gccCCTGCCGTACCGTAAAATCATACTTTGCACTg > 1:2389180‑M1/4‑35 (MQ=255) ggCCTGCCGTACCGTAAAATCATCCTTTGCACTgg > 1:4519893/1‑35 (MQ=255) ggCCTGCCGTACCGTAAAATCATCCTTTGCACTgg > 1:20275055/1‑35 (MQ=255) ggCCTGCCGTACCGTAAAATCATCCTTTGCACTgg > 1:16876736/1‑35 (MQ=255) gcCCTGCCGTACAGTAAAATCATCCTTTGCACTgg > 1:17430073‑M1/3‑35 (MQ=255) ccCCTGCCGTACCGTAAAATCATCCTTTGCACTgg > 1:18929419‑M1/3‑35 (MQ=255) gCCTGCCGTACCGTAAAATCATCCTTTGCACTGGc > 1:19033451/1‑35 (MQ=255) cCCTGCCGTACCGTAAAATCATCCTTTGCACTGGc > 1:3469077‑M1/2‑35 (MQ=255) CCTGCCTTACCGTAAAATCATCCTTTGCACTGGCg < 1:7109773‑M1/35‑1 (MQ=255) CCTGCCGTACCGTAAAATCATCCTTTGCACTGGCg > 1:12982154‑M1/1‑35 (MQ=255) CCTGCCGTACCGTAAAATCATCCTTTGCACTGGCg < 1:20233852‑M1/35‑1 (MQ=255) CCTGCCGTACCGTAAAATCATCCTTTGCACTGGCg < 1:17315581‑M1/35‑1 (MQ=255) | CTGGTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCACTGGCG > REL606/957446‑957514 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |