New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 306962169 (0.670)12 (0.140) 4/40 NT 17.1% coding (838/1500 nt) pitB phosphate transporter
?REL606 = 3625456 59 (0.690)pseudogene (7/738 nt) yhjQ b3534; cell division protein (chromosome partitioning ATPase)

Only 100 of 124 total aligned reads displayed.

AATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTG  >  REL606/3069587‑3069655
                                  |                                  
aaTGGAGGTTCCATCGCAATCAACTTCTGCGGCAG                                    <  1:6549745‑M1/35‑1 (MQ=255)
 aTGGAGGTTCCATCGCATTCAACTTCTGCGGCAGt                                   <  1:10197333/35‑1 (MQ=255)
 aTGGAGGTTCCATCGCAATCAACTTCTGCGGCAGt                                   <  1:14233901/35‑1 (MQ=255)
 aTGGAGGTTCCATCGCAATCAACTTCTGCGGCAGt                                   <  1:16535989/35‑1 (MQ=255)
 aTGGAGGTTCCATCGCAATCAACTTCTGCGGCAGt                                   <  1:6764043/35‑1 (MQ=255)
 aTGGAGGGTCCATCGCAATCAACTTCTGCGGGAgg                                   >  1:8525170/1‑34 (MQ=25)
 aTGGAGGGTCCATCGCAATCAACTTCTGCGGCAGg                                   >  1:14411894‑M1/1‑34 (MQ=255)
 aTGGAGGGTCCATCGCAATCAACTTCTGCGGCAGg                                   >  1:14130098‑M1/1‑34 (MQ=255)
 aTGGAGGGTCCATCGCAATCAACTTCTGCGGCAGg                                   >  1:10781162‑M1/1‑34 (MQ=255)
  tGGAGGTTCCATCGCAATCAACTTCTGCGGCAGtt                                  <  1:15800728/35‑1 (MQ=255)
  tGGAGGTTCCATCGCAATCAACTTCTGCGGCAGgg                                  >  1:16496884‑M1/1‑33 (MQ=255)
   ggAGGTTCCATCGCAATCAACTTCTGCGGCAGggg                                 >  1:12878756‑M1/1‑32 (MQ=255)
   ggAGGTTCCATCGCAATCAACTTCTGCGGCAGggg                                 >  1:955876‑M1/1‑32 (MQ=255)
   ggAGGTTCCATCGCAATCAACTTCTGCGGCAGggg                                 >  1:10983670‑M1/1‑32 (MQ=255)
   ggAGGTTCCATCGCAATCAACTTCTGCGGCAGTTc                                 <  1:11414244/35‑1 (MQ=255)
    gAGGTTCCATCGCAATCAACTTCTGCGGCAGgggg                                >  1:16779454‑M1/1‑31 (MQ=255)
    gAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCa                                <  1:18837563/35‑1 (MQ=255)
    gAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCa                                <  1:9557721/35‑1 (MQ=255)
    gAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCa                                <  1:1033227/35‑1 (MQ=255)
     aGGTTCCATCGCAATCAACTTCTGCGGCAGggggg                               >  1:16595993‑M1/1‑30 (MQ=255)
     aGGTTCCATCGCAATCAACTTCTGCGGCAGggggg                               >  1:15604591‑M1/1‑30 (MQ=255)
     aGGTTCCATCGCAATCAACTTCTGCGGCAGggcgg                               >  1:3020323‑M1/1‑30 (MQ=255)
     aGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAg                               <  1:5542029/35‑1 (MQ=255)
     aGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAg                               <  1:15942491/35‑1 (MQ=255)
      ggTTCCATCGCAATCAACTTCTGCGGCAGgggggg                              >  1:4958347‑M1/1‑29 (MQ=255)
      ggTTCCATCGCAATCAACTTCTGCGGCAGTTCAgg                              <  1:11142200/35‑1 (MQ=255)
      ggTTCCATCGCAATCAACTTCTGCGGCAGTTCAgg                              <  1:17056030/35‑1 (MQ=255)
       gTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGa                             <  1:17055873/35‑1 (MQ=255)
       gTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGa                             <  1:18693035/35‑1 (MQ=255)
        ttCCATCGCAATCAACTTCTGCGGCAGgggggggg                            >  1:5351892‑M1/1‑27 (MQ=255)
        ttCCATCGCAATCAACTTCTGCGGCAGgggggggg                            >  1:16029725‑M1/1‑27 (MQ=255)
        ttCCATCGCAATCAACTTCTGCGGCAGgggggggg                            >  1:13405240‑M1/1‑27 (MQ=255)
        ttCCATCGCAATCAACTTCTGCGGCAGTTCAGGAt                            <  1:4807258/35‑1 (MQ=255)
        ttCCATCGCAATCAACTTCTGCGGCAGTTCAGGAt                            <  1:16067231/35‑1 (MQ=255)
        ttCCATCGCAATCAACTTCTGCGGCAGTTCAGGAt                            <  1:4288479/35‑1 (MQ=255)
         tCCATCGCAATCAACTTCTGCGGCAGggggggggg                           >  1:7292365‑M1/1‑26 (MQ=255)
         tCCATCGCAATCAACTTCTGCGGCAGTTCAGGATg                           <  1:2472010/35‑1 (MQ=255)
          ccATCGCAATCAACTTCTGCGGCAGgggggggggg                          >  1:2631909‑M1/1‑25 (MQ=255)
          ccATCGCAATCAACTTCTGCGGCAGTTCAGGATgg                          <  1:9471166/35‑2 (MQ=255)
          ccATCGCAATCAACTTCTGCGGCAGTTCAGGATGc                          <  1:11680948/35‑1 (MQ=255)
          ccATCGCAATCAACTTCTGCGGCAGTTCAGGATGc                          <  1:9261662/35‑1 (MQ=255)
          ccATCGCAATCAACTTCTGCGGCAGTTCAGGATGc                          <  1:1785042/35‑1 (MQ=255)
           cATCGCAATCAACTTCTGCGGCAGggggggggggg                         >  1:6320725‑M1/1‑24 (MQ=255)
           cATCGCAATCAACTTCTGCGGCAGggggggggggg                         >  1:16499908‑M1/1‑24 (MQ=255)
           cATCGCAATCAACTTCTGCGGCAGTTCAGGATGCt                         <  1:1992756/35‑1 (MQ=255)
           cATCGCAATCAACTTCTGCGGCAGTTCAGGATGCt                         <  1:10627211/35‑1 (MQ=255)
           cATCGCAATCAACTTCTGCGGCAGTTCAGGATGCt                         <  1:16215704/35‑1 (MQ=255)
            aTCGCAATCAACTTCTGCGGCAGgggggggggggt                        >  1:8525978‑M1/1‑23 (MQ=255)
            aTCGCAATCAACTTCTGCGGCAGgggggggggggg                        >  1:13660785‑M1/1‑23 (MQ=255)
             tCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGt                       <  1:3076616/35‑1 (MQ=255)
             tCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGt                       <  1:17122311/35‑1 (MQ=255)
             tCGCAATCAACTTCTGCGGCAGGTCAGGGTGGTGt                       >  1:10186235/1‑35 (MQ=18)
              cGCAATCAACTTCTGCGGCAGTTCAGGATGCTGtt                      <  1:17183180/35‑1 (MQ=255)
              cGCAATCAACTTCTGCGGCAGTTCAGGATGCTGtt                      <  1:10686748/35‑1 (MQ=255)
               gCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTg                     <  1:3936730/35‑1 (MQ=255)
                cAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGc                    <  1:12340050/35‑1 (MQ=255)
                cAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGc                    <  1:6952070/35‑1 (MQ=255)
                cAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGc                    <  1:7133908/35‑1 (MQ=255)
                 aaTCAACTTCTGCTGCAGTTCAGGATGCTGTTGCa                   >  1:1819789/1‑35 (MQ=255)
                 aaTCAACTTCTGCGGCAGTTCAGGATGCTGTTGCa                   <  1:16065438/35‑1 (MQ=255)
                 aaTCAACTTATGCGGCAGTTCAGGATGCTGTTGCa                   <  1:12315221/35‑1 (MQ=255)
                  aTCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAg                  <  1:10377629/35‑1 (MQ=255)
                  aTCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAg                  <  1:19431909/35‑1 (MQ=255)
                    cAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGt                <  1:11520341/35‑1 (MQ=255)
                    cAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGt                <  1:11414718/35‑1 (MQ=255)
                     aaCTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTa               <  1:20291628/35‑1 (MQ=255)
                      aCTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAg              <  1:3353620/35‑1 (MQ=255)
                      aCTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAg              <  1:8972767/35‑1 (MQ=255)
                       cTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgt             <  1:11257173/35‑1 (MQ=255)
                       cTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgt             <  1:20544865/35‑1 (MQ=255)
                       cTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgt             <  1:20392555/35‑1 (MQ=255)
                        ttCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgtg            <  1:4250234/35‑1 (MQ=255)
                        ttCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgtg            <  1:20308774/35‑1 (MQ=255)
                         tCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgtgt           <  1:7935520/35‑1 (MQ=255)
                         tCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgtgt           <  1:4680144/35‑1 (MQ=255)
                          cTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGtt          <  1:9319136/35‑1 (MQ=255)
                          cTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGtt          <  1:9634093/35‑1 (MQ=255)
                           tGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTc         <  1:15172693/35‑1 (MQ=255)
                           tGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTc         <  1:5155386/35‑1 (MQ=255)
                           tGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTc         <  1:4720063/35‑1 (MQ=255)
                           tGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTc         <  1:2231749/35‑1 (MQ=255)
                            gCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCg        <  1:4481417/35‑1 (MQ=255)
                            gCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCg        <  1:17939313/35‑1 (MQ=255)
                             cGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGa       <  1:5633654/35‑1 (MQ=255)
                             cGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGa       <  1:12629433/35‑1 (MQ=255)
                             cGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGa       <  1:636998/35‑1 (MQ=255)
                             cGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGa       <  1:15573947/35‑1 (MQ=255)
                               gCAGTTCAGGATGCTGTTGCATGTAGTGTTCGAAg     >  1:16857661/1‑35 (MQ=255)
                               gCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAg     <  1:6557219/35‑1 (MQ=255)
                               gCAGTTCAGGATGCTGTTGCAGGGAGGGTTTGAAg     >  1:19308855/1‑35 (MQ=25)
                                cAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGt    >  1:10377691/1‑35 (MQ=255)
                                cAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGt    <  1:8609927/35‑1 (MQ=255)
                                cAGTTCAGGATGCTGTTGCAGGTAGGGTTCGAAGt    >  1:16899682/1‑35 (MQ=255)
                                cAGTTCAGGATGCTGTTGCAGGTAGGGTTCGAAGt    >  1:5358881/1‑35 (MQ=255)
                                 aGTTCAGGATGCTGTTGCAGGTAGTGTTTGAAgat   >  1:20391403/1‑33 (MQ=37)
                                 aGTTCAGGATGCTGTTGCAGGTAGGGTTCGAAGtt   >  1:3185467/1‑35 (MQ=255)
                                 aGTTCAGGATGCTGTTGCAGGTAGGGTTCGAAGtt   >  1:18038285/1‑35 (MQ=255)
                                  gTTCAGGATGCTGTTGCAGGTAGTGTTTGAAGTTg  >  1:16434707/1‑35 (MQ=255)
                                  gTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTg  <  1:8176326/35‑1 (MQ=255)
                                  gTTCAGGATGCTGTTGCAGGGAGGGTTCGGAGGTg  >  1:14836150/1‑35 (MQ=16)
                                  |                                  
AATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTG  >  REL606/3069587‑3069655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.