New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1731442 = | 72 (0.700) | 7 (0.070) | 3/46 | NT | 11.5% | coding (303/627 nt) | ydhY | predicted 4Fe‑4S ferridoxin‑type protein |
? | REL606 | 3480446 = | 39 (0.400) | coding (628/2394 nt) | malP | maltodextrin phosphorylase |
CACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTA > REL606/3480412‑3480480 | cccaGACGCGGCGGCTGCGCCACGCCATTACGATa < 1:12262196/33‑1 (MQ=37) cccaGACCCAGCGGCTGCGCCACGCCATTACGATa < 1:4019980/33‑1 (MQ=37) ccaGACGCAGCGGCTGCGCCACGCCATTACGATAg < 1:12553370/34‑1 (MQ=255) caGACGCAGCGGCTGCGCCACGCCATTACGATAGc < 1:15615076/35‑1 (MQ=255) ggCTGCGCCACGCCATTACGATAGCCGACAACgtg > 1:13144805/1‑33 (MQ=255) ggCTGCGCCACGCCATTACGATAGCCGACAACggg > 1:15232596/1‑35 (MQ=255) ggCTGCGCCACGCCATTACGATAGCCGACAACggg > 1:2161436/1‑35 (MQ=255) ggCTGCGCCACGCCATTACGATAGCCGACAACggg > 1:19798679/1‑35 (MQ=255) gCTGCGCCACGCCATTACGATAGCCGACAACgggg > 1:17990444/1‑35 (MQ=255) gCTGCGCCACGCCATTACGATAGCCGACAACgggg > 1:20355869/1‑35 (MQ=255) gCTGCGCCACGCCATTACGATAGCCGACAACgggg > 1:3718016/1‑35 (MQ=255) gCTGCGCCACGCCATTACGATAGCCGACAACgggg > 1:9536601/1‑35 (MQ=255) cTGCGCCACGCCATTACGATAGCCGACAACGGGga > 1:13023832/1‑35 (MQ=255) cTGCGCCACGCCATTACGATAGCCGACAACGGGga > 1:17366199/1‑35 (MQ=255) cTGCGCCACGCCATTACGATAGCCGACAACGGGga > 1:10791588/1‑35 (MQ=255) tGCGCCACGCCATTACGATAGCCGACAACGGGgag > 1:12092187/1‑35 (MQ=255) tGCGCCACGCCATTACGATAGCCGACAACGGGgag > 1:7128522/1‑35 (MQ=255) tGCGCCACGCCATTACGATAGCCGACAACGGGgag > 1:11522400/1‑35 (MQ=255) gcgcCACGCCATTACGATAGCCGACAACGGGgaga > 1:17988722/1‑35 (MQ=255) cgccacgccaTTACGATAGCCGACAACGGGGAGAt > 1:10893806/1‑35 (MQ=255) cgccacgccaTTACGATAGCCGACAACGGGGAGAt > 1:18411932/1‑35 (MQ=255) gccacgccaTTACGATAGCCGACAACGGGGAGATc > 1:18558472/1‑35 (MQ=255) ccacgccaTTACGATGGCCGACAACGGGGAGATcc > 1:10303735/1‑35 (MQ=255) cacgccaTTACGATAGCCGACAACGTGGAGATccc > 1:12913683/1‑35 (MQ=255) cacgccaTTACGATAGCCGACAACGGGGAGATccc > 1:18787844/1‑35 (MQ=255) cacgccaTTACGATAGCCGACAACGGGGAGATccc > 1:19485131/1‑35 (MQ=255) cacgccaTTACGATAGCCGACAACGGGGAGATccc > 1:19664841/1‑35 (MQ=255) cacgccaTTACGATAGCCGACAACGGGGAGATccc > 1:4747387/1‑35 (MQ=255) cacgccaTTACGATAGCCGACAACGGGGAGATccc > 1:1326635/1‑35 (MQ=255) cacccctTTACTTTAGCCGACAACGGGGAGATccc < 1:10852835/35‑1 (MQ=19) actccaTTACGATAGCCGACAACGGGGAGATCCCa > 1:12833755/4‑35 (MQ=255) acgccaTTACGTTAGCCGACAACGGGGAGATCCCa < 1:9825118/35‑1 (MQ=255) acgccaTTACGATAGCCGACAACGGGGAGATCCCa > 1:17250210/1‑35 (MQ=255) cgccaTTACGATAGCCGACAACGGGGAGATCCCAc > 1:916893/1‑35 (MQ=255) ccatttctttAGCCGACAACGGGGAGATCCCACGc < 1:189624‑M2/25‑1 (MQ=255) ccaTTACGATAGCCGACAACGGGGAGATCCCACGc > 1:11380754/1‑35 (MQ=255) tatttctttAGCCGACAACGGGGAGATCCCACGCt < 1:2379837‑M2/26‑1 (MQ=255) cattactttAGCCGACAACGGGGAGATCCCACGCt < 1:8399918‑M2/26‑1 (MQ=255) caTTATGTTAGCCGACAACGGGGAGATCCCACGCt < 1:4748385/35‑1 (MQ=37) caTTACGATAGCCGACAACGGGGAGATCCCACGCt > 1:17633552/1‑35 (MQ=255) ttttctttAGCCGACAACGGGGAGATCCCACGCtt < 1:10302034‑M2/27‑1 (MQ=255) tttACGTTAGCCGACAACGGGGAGATCCCACGCtt < 1:13280506/34‑1 (MQ=255) atttctttAGCCGACAACGGGGAGATCCCACGCtt < 1:8004776‑M2/27‑1 (MQ=255) aTTACGATAGCCGACAACGGGGAGATCCCACGCtt > 1:9734912/1‑35 (MQ=255) aTTACGATAGCCGACAACGGGGAGATCCCACGCtt > 1:16054810/1‑35 (MQ=255) tttttttAGCCGACAACGGGGAGATCCCACGCTTg < 1:1840389‑M2/28‑1 (MQ=255) tttgtttAGCCGACAACGGGGAGATCCCACGCTTg < 1:7953395‑M2/28‑1 (MQ=255) ttactttAGCCGACAACGGGGAGATCCCACGCTTg < 1:10701339‑M2/28‑1 (MQ=255) ttACGATAGCCGACAACGGGGAGATCCCACGCTTg > 1:16673341/1‑35 (MQ=255) ttACGATAGCCGACAACGGGGAGATCCCACGCTTg > 1:1038108/1‑35 (MQ=255) ttACGATAGCCGACAACGGGGAGATCCCACGCTTg > 1:6600486/1‑35 (MQ=255) tagtttAGCCGACAACGGGGAGATCCCACGCTTGa < 1:4661173‑M2/29‑1 (MQ=255) tACGATAGCCGACAACGGGGAGATCCCACGCTTGa > 1:9980015/1‑35 (MQ=255) tACGATAGCCGACAACGGGGAGATCCCACGCTTGa > 1:7812378/1‑35 (MQ=255) tACGATAGCCGACAACGGGGAGATCCCACGCTTGa > 1:14315652/1‑35 (MQ=255) tACGATAGCCGACAACGGGGAGATCCCACGCTTGa > 1:2915506/1‑35 (MQ=255) tACGATAGCCGACAACGGGGAGATCCCACGCTTGa > 1:2538819/1‑35 (MQ=255) tgtttAGCCGACAACGGGGAGATCCCACGCTTGAc < 1:14405608‑M2/30‑1 (MQ=255) ncGATAGCCGACAACGGGGAGATCCCACGCTTGAc > 1:6375870/2‑35 (MQ=255) gttttAGCCGACAACGGGGAGATCCCACGCTTGAc < 1:1937519‑M2/30‑1 (MQ=255) actttAGCCGACAACGGGGAGATCCCACGCTTGAc < 1:14380300‑M2/30‑1 (MQ=255) aCGATAGCCGACAACGGGGAGATCCCACGCTTGAc > 1:263301/1‑35 (MQ=255) aCGATAGCCGACAACGGCGAGATCCCACGCTTGAc > 1:17986285/1‑35 (MQ=255) tgttAGCCGACAACGGGGAGATCCCACGCTTGAcc < 1:16597841‑M2/31‑1 (MQ=255) cgttAGCCGACAACGGGGAGATCCCACGATTGAcc < 1:11702513/32‑1 (MQ=37) cGATAGCCGACAACGGGGAGATCCCACGCTTGAcc > 1:962785/1‑35 (MQ=255) tttAGCCGACAACGGGGAGATCCCACGCTTGACCg < 1:11809062‑M2/32‑1 (MQ=255) gATAGCCGACAACGGGGAGATCCCACGCTTGACCg > 1:1661816/1‑35 (MQ=255) gATAGCCGACAACGGGGAGATCCCACGCTTGACCg > 1:4105521/1‑35 (MQ=255) ttAGCCGACAACGGGGAGATCCCACGCTTGACCgg < 1:17242474‑M2/33‑1 (MQ=255) ttAGCCGACAACGGGGAGATCCCACGCTTGACCgg < 1:15964466‑M2/33‑1 (MQ=255) ttAGCCGACAACGGGGAGATCCCACGCTTGACCgg < 1:8289746‑M2/33‑1 (MQ=255) gtAGCCGACAACGGGGAGATCCCACGCTTGACCgg < 1:438862‑M2/33‑1 (MQ=255) aTAGCCGACAACGGGGAGATCCCACGCTTGACCgg > 1:13475042/1‑35 (MQ=255) aTAGCCGACAACGGGGAGATCCCACGCTTGACCgg > 1:4822762/1‑35 (MQ=255) tAGCCGACAACGGGGAGATCCCACGCTTGACCGGt > 1:3434565‑M2/2‑35 (MQ=255) tAGCCGACAACGGGGAGATCCCACGCTTGACCGGt < 1:8330811‑M2/34‑1 (MQ=255) tAGCCGACAACGGGGAGATCCCACGCTTGACCGGt > 1:6911070‑M2/2‑35 (MQ=255) tAGCCGACAACGGGGAGATCCCACGCTTGACCGGt > 1:5241236‑M2/2‑35 (MQ=255) aGCCGACAACGGGGAGATCCCACGCTTGACCGGTa > 1:16438853/1‑35 (MQ=255) aGCCGACAACGGGGAGATCCCACGCTTGACCGGTa > 1:19763050/1‑35 (MQ=255) aGCCGACAACGGGGAGATCCCACGCTTGACCGGTa > 1:19362168/1‑35 (MQ=255) aGCCGACAACGGGGAGATCCCACGCTTGACCGGTa > 1:4148704/1‑35 (MQ=255) aGCCGACAACGGGGAGATCCCACGCTTGACCGGTa < 1:14768729/35‑1 (MQ=255) | CACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTA > REL606/3480412‑3480480 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |