New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 32485 = | 59 (0.570) | 7 (0.070) | 6/46 | NT | 12.4% | coding (40/822 nt) | dapB | dihydrodipicolinate reductase |
? | REL606 | = 671859 | 42 (0.430) | coding (1118/1539 nt) | lnt | apolipoprotein N‑acyltransferase |
CGCAGTAAGCTCAATACCATTTACCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAACGACGACAT > REL606/671825‑671893 | cGCAGTAAGCTCAATACCATTTACCGACAgcggcg > 1:6794611/1‑35 (MQ=255) cGCAGTAAGCTCAATACCATTTACCGACAgcggcg > 1:19159513/1‑35 (MQ=255) cGCAGTAAGCTCAATACCATTTACCGACAgcggcg > 1:20238870/1‑35 (MQ=255) gCAGTAAGCTCAATACCATTTACCGACAGCGGCGg < 1:16832207‑M2/35‑2 (MQ=255) gCAGTAAGCTCAATACCATTTACCGACAGCGGCGg < 1:2130238‑M2/35‑2 (MQ=255) cAGTAAGCTCAATACCATTTACCGACAGCGGCGgg < 1:1424975‑M2/35‑3 (MQ=255) cAGTAAGCTCAATACCATTTACCGACAGCGGCGgg < 1:15587864‑M2/35‑3 (MQ=255) cAGTAAGCTCAATACCATTTACCGACAGCGGCGgg < 1:8048419‑M2/35‑3 (MQ=255) aGTAAGCTCAATACCATTTACCGACAGCGGCGggg < 1:3347716‑M2/35‑4 (MQ=255) aGTAAGCTCAATACCATTTACCGACAGCGGCGggg < 1:4410801‑M2/35‑4 (MQ=255) aGTAAGCTCAATACCATTTACCGACAGCGGCGggg < 1:11484819‑M2/35‑4 (MQ=255) aGTAAGCTCAATACCACTTACCGACAGCggcggcg > 1:17371057/1‑34 (MQ=38) gTAAGCTCAATACCATTTACCGACAGCGGCGgggg < 1:8172436‑M2/35‑5 (MQ=255) gTAAGCTCAATACCATTTACCGACAGCGGCGgggg < 1:18056523‑M2/35‑5 (MQ=255) gTAAGCTCAATACCATTTACCGACAGCGGCGgggg < 1:5808420‑M2/35‑5 (MQ=255) gTAAGCTCAATACCATTTACCGACAGCGGCGggcg < 1:1969855‑M2/35‑5 (MQ=255) tAAGCTCAATACCATTTACCGACAGCGGCGggggg < 1:2596441‑M2/35‑6 (MQ=255) tAAGCTCAATACCATTTACCGACAGCGGCGggggg < 1:15670573‑M2/35‑6 (MQ=255) tAAGCTCAATACCATTTACCGACAGCGGCGggggg < 1:8067245‑M2/35‑6 (MQ=255) aaGCTCAATACCATTTACCGACAGCTGCGGCTggg > 1:18982244/1‑34 (MQ=255) aaGCTCAATACCATTTACCGACAGCGGCGgggggg < 1:4398186‑M2/35‑7 (MQ=255) aaGCTCAATACCATTTACCGACAGCGGCGgggggg < 1:12654929‑M2/35‑7 (MQ=255) aaGCTCAATACCATTTACCGACAGCGGCGgggggg < 1:5144790‑M2/35‑7 (MQ=255) aGCTCAATACCATTTACAGACAGCGGCGGCTGGat < 1:4019387/35‑1 (MQ=255) gCTCAATACCATTTACCGACAGCGGCGgggggggg < 1:8780359‑M2/35‑9 (MQ=255) cTCAATACCATTTACCGACAGCTGCGGCTGGatat > 1:20114056/1‑35 (MQ=255) cTCAATACCATTTACCGACAGCGGCGgggggggtg < 1:5856269‑M2/35‑10 (MQ=255) cTCAATACCATTTACCGACAGCGGCGggggggggt < 1:11104106‑M2/35‑10 (MQ=255) cTCAATACCATTTACCGACAGCGGCGggggggggt < 1:16635157‑M2/35‑10 (MQ=255) tCAATACCATTTACCGACAGCGGCGggggggggta < 1:1329690‑M2/35‑11 (MQ=255) ccAAAACCATTCCCCGACAGCGGCGGCTGGatata < 1:3030577/34‑1 (MQ=25) acAATCCCATTTCCCGACAGCGGCGGCTGGatata < 1:5836948/34‑1 (MQ=37) aaaaTCCCATTTCCCGACAGCGGCGGCTGGatata < 1:12227260/33‑1 (MQ=25) cAATACCATTTACCGACAGCGGCGggggggggtat < 1:16167329‑M2/35‑12 (MQ=255) cAATACCATTTACCGACAGCGGCGggggggggtat < 1:2312813‑M2/35‑12 (MQ=255) aaTCCCATTCCCCGACAGCGGCGGCTGGATATATg < 1:14826788/35‑1 (MQ=25) aaTACCATTTACCGACAGCGGCGGGTGGggatata > 1:7428737/1‑34 (MQ=25) atcccATTTCCCGACAGCGGCGGCTGGATATATgg < 1:5436060/32‑1 (MQ=37) aTACAATTCCCCGACAGCGGCGGCTGGATATATgg < 1:11731667/35‑1 (MQ=25) tcccATTTCCCGACAGCGGCGGCTGGATATATGGc < 1:5157688/33‑1 (MQ=38) tcccATTTCCCGACAGCGGCGGCTGGATATATGGc < 1:8631756/33‑1 (MQ=38) tACCATTTACCGACAGCGGCGggggggggtatggg < 1:11745706‑M2/35‑15 (MQ=255) aCCATTTACCGACAGCGGCGggggggggtatgggc < 1:6016835‑M2/35‑16 (MQ=255) ccATTTCCCGACAGCGGCGGCTGGATATATGGccc < 1:948929/35‑1 (MQ=255) ccATTTACCGACAGCGGCGggggggggtatgggcc < 1:2157608‑M2/35‑17 (MQ=255) ccATTTACCGACAGCGGCGGGGGGGGATATGGctt > 1:13364735/1‑33 (MQ=16) cttttCCCGACAGCGGCGGCTGGATATATGGCCCa < 1:19123565/33‑1 (MQ=38) cATTTCCCGACAGCGGCGGCTGGATATATGGCCCa < 1:12965922/35‑1 (MQ=255) cATTTCCCGACAGAGGCGGCTGGATATATGGCCCa < 1:8374653/35‑1 (MQ=37) cATTTACCGACAGCGGCGggggggggtatgggccg < 1:1327696‑M2/35‑18 (MQ=255) tttCCCGACAGCGGCGGCTGGATATATGGCCCACg < 1:5358938/35‑1 (MQ=255) tttCCCGACAGCGGCGGCTGGATATATGGCCCACg < 1:17257210/35‑1 (MQ=255) tttCCCGACAGCGGCGGCTGGATATATGGCCCACg < 1:20511606/35‑1 (MQ=255) tttCCCGACAGCGGCGGCTGGATATATGGCCCACg < 1:17835149/35‑1 (MQ=255) tttCCCGACAGCGGCGGCTGGATATATGGCCCACg < 1:11795838/35‑1 (MQ=255) ttcaCCGACAGCGGCGGCTGGATATATGGCCCACg < 1:865461/32‑1 (MQ=255) ttcccGCCAGCGGCGGCTGGATATATGGCCCACgg < 1:18918536/32‑1 (MQ=37) ttcccGACAGCGGCGGCTGGATATATGGCCCACgg < 1:8002744/32‑1 (MQ=255) tgcccGACAGCGGAGGCTGGATATATGGCCCACgg < 1:12109731/32‑1 (MQ=37) ccccGACAGCGGCGGCTGGATATATGGCCCACGGc < 1:5971520/33‑1 (MQ=255) cccGACAGCGGCGGCTGGATATATGGCCCACGGCt < 1:20134962/34‑1 (MQ=255) cccGACAGCGGCGGCTGGATATATGGCCCACGGCt < 1:13522609/34‑1 (MQ=255) ccaaCAGCGGCGGCTGGATATATGGCCCACGGCTg < 1:17647164/32‑1 (MQ=255) ccGGCAGCGGCGGCTGGATATATGGCCCACGGCTg < 1:19207503/35‑1 (MQ=255) ccGACAGCGGCGGCTGGATATATGGCCCACGGCTg < 1:18117790/35‑1 (MQ=255) ccGACAGCGGCGGCTGGATATATGGCCCACGGCTg < 1:13182553/35‑1 (MQ=255) cgccAGCGGCGGCTGGATATATGGACCACGGCTGa < 1:1655725/32‑1 (MQ=38) cGACAGCGGCGGCTGGATATATGGCCCACGGCTGa < 1:19474491/35‑1 (MQ=255) cGACAGCGGCGGCTGGATATATGGCCCACGGCTGa < 1:17127518/35‑1 (MQ=255) gccAGCGGCGGCTGGATATATGGCCCACGGCTGaa < 1:13197259/33‑1 (MQ=255) gACAGCGGCGGCTGGATATATGGCCCACGGCTGaa < 1:12299687/35‑1 (MQ=255) aGCGGCGGCTGGATATATGGCCCACGGCTGAacga < 1:7479784/35‑1 (MQ=255) gcggcgGCTGGATATATGGCCCACGGCTGAacgac < 1:3585919/35‑1 (MQ=255) gcggcgGCTGGATATATGGCCCACGGCTGAacgac < 1:3459742/35‑1 (MQ=255) gcggcgGCTGGATATATGGCCCACGGCTGAacgac < 1:9467718/35‑1 (MQ=255) gcggcgGCTGGATATATGGCCCACGGCTGAacgac < 1:70537/35‑1 (MQ=255) cggcggCTGGATATATGGCCCACGGCTGAacgacg < 1:708974/35‑1 (MQ=255) cggcggCTGGATATATGGCCCACGGCTGAacgacg < 1:7603215/35‑1 (MQ=255) cggcggCTGGATATATGGCCCACGGCTGAacgacg < 1:15573658/35‑1 (MQ=255) cggcggCTGGATATATGGCCCACGGCTGAacgacg < 1:12442082/35‑1 (MQ=255) cggcggCTGGATATATGGCCCACGGCTGAacgacg < 1:10960248/35‑1 (MQ=255) cgcggcTGGATATATGGCCCACGGCTGAAcgacga < 1:15385466/34‑1 (MQ=255) gcgggggggcttatgggccgccagttgattcaggc > 1:10769223‑M2/1‑3 (MQ=255) gcggcTGGATATATGGCCCACGGCTGAACgacgac < 1:9941028/35‑1 (MQ=255) gcggcTGGATATATGGCCCACGGCTGAACgacgac < 1:3887910/35‑1 (MQ=255) gcggcTGGATATATGGCCCACGGCTGAACgacgac < 1:380029/35‑1 (MQ=255) gcggcTGGATATATGGCCCACGGCTGAACgacgac < 1:1682616/35‑1 (MQ=255) gcggcTGGATATATGGCCCACGGCTGAACgacgac < 1:12880639/35‑1 (MQ=255) cgggggggcgtatgggccgccagttgattcaggcg > 1:6565032‑M2/1‑2 (MQ=255) cggcTGGATATATGGCCCACGGCTGAACGACGACa < 1:7279155/35‑1 (MQ=255) cggcTGGATATATGGCCCACGGCTGAACGACGACa < 1:2633551/35‑1 (MQ=255) cggcTGGATATATGGCCCACGGCTGAACGACGACa < 1:16144284/35‑1 (MQ=255) cggcTGGATATATGGCCCAAGGCTGAACGACGACa < 1:20128076/35‑1 (MQ=255) ggcTGGATATATGGCCCACGGCTGAACGACGACAt > 1:2878132/1‑35 (MQ=255) ggcTGGATATATGGCCCACGGCTGAACGACGACAt > 1:1748300/1‑35 (MQ=255) ggcTGGATATATGGCCCACGGCTGAACGACGACAt < 1:9836251/35‑1 (MQ=255) | CGCAGTAAGCTCAATACCATTTACCGACAGCGGCGGCTGGATATATGGCCCACGGCTGAACGACGACAT > REL606/671825‑671893 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |