New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2933125 = | 46 (0.450) | 11 (0.140) | 5/38 | NT | 16.9% | coding (1669/2874 nt) | gcvP | glycine dehydrogenase |
? | REL606 | = 3606341 | 72 (0.890) | coding (1517/2076 nt) | yhjG | predicted outer membrane biogenesis protein |
Only 100 of 135 total aligned reads displayed.
TGCATACAAACGGCGTCGTAACCGGTCAGTTTCACCAGCCAGTCAGCCAGCTGCGCAATCATCTGCTGA > REL606/2933091‑2933159 | tGCATACAAACGGCGTCGTAACCGGTCAGTTTCAc > 1:10273088/1‑35 (MQ=255) ctaccgcgtagttccgcgtcaccgttcatttcccc < 1:4051884‑M1/1‑1 (MQ=255) ctaccgcgtagttccgcgtcaccgttcatttcccc < 1:12625134‑M1/1‑1 (MQ=255) ctaccgcgtagttccgcgtcaccgttcatttcccc < 1:14784399‑M1/1‑1 (MQ=255) ctaccgcgtagttccgcgtcaccgttcatttcccc < 1:16581438‑M1/1‑1 (MQ=255) taccgcgtagttccgcgtcaccgttcatttccccc < 1:16558874‑M1/2‑1 (MQ=255) gCATACAAACGGCGTCGTAACCGGTCAGTTTCAcc > 1:11805154/1‑35 (MQ=255) ccATACAAGCGGCGTCGTAACCGGTCAGTTTCAcc < 1:14147388/34‑1 (MQ=255) cATACAAACGGCGTCGTAACCGGTCAGTTTCAcca < 1:16845833/35‑1 (MQ=255) cATACAAACGGCGTCGTAACCGGTCAGTTTCAcca > 1:6717443/1‑35 (MQ=255) cATACAAACGGCGTCGTAACCGGTCAGTTTCAcca < 1:7579947/35‑1 (MQ=255) cATACAAACGGCGTCGTAACCGGTCAGTTTCAcca < 1:13274309/35‑1 (MQ=255) accgcgtagttccgcgtcaccgttcatttccccca > 1:1636007‑M1/33‑35 (MQ=255) accgcgtagttccgcgtcaccgttcatttccccca < 1:8397690‑M1/3‑1 (MQ=255) accgcgtagttccgcgtcaccgttcatttccccca > 1:4308732‑M1/33‑35 (MQ=255) ccgcgtagttccgcgtcaccgttcatttcccccag > 1:11245360‑M1/32‑35 (MQ=255) ccgcgtagttccgcgtcaccgttcatttcccccag > 1:16277549‑M1/32‑35 (MQ=255) ccgcgtagttccgcgtcaccgttcatttcccccag > 1:18218285‑M1/32‑35 (MQ=255) ccgcgtagttccgcgtcaccgttcatttcccccag > 1:754549‑M1/32‑35 (MQ=255) ccgcgtagttccgcgtcaccgttcatttccccaag > 1:5482577‑M1/32‑32 (MQ=255) aTACAAACGGCGTCGTAACCGGTCAGTTTCAcctg < 1:5064539/35‑3 (MQ=255) aTACAAACGGCGTCGTAACCGGTCAGTTTCAccag > 1:7350942/1‑35 (MQ=255) aTACAAACGGCGTCGTAACCGGTCAGTTTCAccag > 1:10569470/1‑35 (MQ=255) aTACAAACGGCGTCGTAACCGGTCAGTTTCAccag > 1:4430217/1‑35 (MQ=255) aTACAAACGGAGTCGTAACCGGTCAGTTTCAccag > 1:6387285/1‑35 (MQ=255) tACAAACGGCGTCGTAACCGGTCAGTTTCAccagc < 1:3808141/35‑1 (MQ=255) tACAAACGGCGTCGTAACCGGTCAGTTTCAccagc > 1:17177702/1‑35 (MQ=255) tACAAACGGCGTCGTAACCGGTCAGTTTCAccagc > 1:15283310/1‑35 (MQ=255) cgcgtagttccgcgtcaccgttcatttcccccagc < 1:16864170‑M1/5‑1 (MQ=255) cgcgtagttccgcgtcaccgttcatttcccccagc > 1:10897613‑M1/31‑35 (MQ=255) aCAAACGGCGTCGTAACCGGTCAGTTTCAccagcc < 1:4246499/35‑1 (MQ=255) aCAAACGGCGTCGTAACCGGTCAGTTTCAccagcc > 1:461278/1‑35 (MQ=255) cAACCGGCGTGGTAACCGGTCAGTTTCAccagcca < 1:13103984/35‑1 (MQ=37) aaaCGGCGTCGTAACCGGTCAGTTTCAccagccag < 1:17872482/35‑1 (MQ=255) aaaCGGCGTCGTAACCGGTCAGTTTCAccagccag > 1:4850289/1‑35 (MQ=255) aaCGGCGTCGTAACCGGTCAGTTTCACCAGCCAGt > 1:5206066/1‑35 (MQ=255) aaCGGCGTCGTAACCGGTCAGTTTCACCAGCCAGt > 1:2676943/1‑35 (MQ=255) aaCGGCGTCGTAACCGGTCAGTTTCACCAGCCAGt > 1:9245933/1‑35 (MQ=255) ggCGTCGTAACCGGTCAGTTTCACCAGCCAGTcag > 1:18293626/1‑35 (MQ=255) cgtcgtAACCGGTCAGTTTCACCAGCCAGTcagcc > 1:203071/1‑35 (MQ=255) gtcgtAACCGGTCAGTTTCACCAGCCAGTcagcca > 1:19455358/1‑35 (MQ=255) tcgtAACCGGTCAGTTTCACCAGCCAGTcagccag > 1:2728632/1‑35 (MQ=255) gtAACCGGTCAGTTTCACCAGCCAGTCAGCCAGCt > 1:331061/1‑35 (MQ=255) gtAACCGGTCAGTTTCACCAGCCAGTCAGCCAGCt > 1:5331189/1‑35 (MQ=255) gtAACCGGTCAGTTTCACCAGCCAGTCAGCCAGCt > 1:11801013/1‑35 (MQ=255) gtAACCGGTCAGTTTCACCAGCCAGTCAGCCAGCt > 1:18587552/1‑35 (MQ=255) gtAACCGGTCAGTTTCACCAGCCAGTCAGCCAGCt > 1:8042108/1‑35 (MQ=255) tAACCGGTCAGTTTCACCAGCCAGTCAGCCAGCTg > 1:12160119/1‑35 (MQ=255) tAACCGGTCAGTTTCACCAGCCAGTCAGCCAGCTg > 1:13036246/1‑35 (MQ=255) tAACCGGTCAGTTTCACCAGCCAGTCAGCCAGCTg > 1:17460727/1‑35 (MQ=255) aaCCGGTCAGTTTCACCAGCCAGTCAGCCAGCTgc > 1:14286019/1‑35 (MQ=255) aCCGGTCAGTTTCACCAGCCAGTCAGCCAGCTgcg > 1:16337150/1‑35 (MQ=255) ccGGTCAGTTTCACCAGCCAGTCAGCCAGCTgcgc > 1:19630186/1‑35 (MQ=255) ccGGTCAGTTTCACCAGCCAGTCAGCCAGCTgcgc > 1:9754854/1‑35 (MQ=255) cGGTCCGTTCCCCCAGCCAGTCAGCCAGCTGCGCa < 1:4178623/35‑1 (MQ=25) gttcattccccCCAGCCAGTCAGCCAGCTGCGCaa > 1:10062150‑M1/12‑35 (MQ=255) ggTCAGTTTCACCAGCCAGTCAGCCAGCTGCGCaa > 1:18054847/1‑35 (MQ=255) ggTCAGTTTCACCAGCCAGTCAGCCAGCTGCGCaa > 1:14300917/1‑35 (MQ=255) gTCAGTTTCACCAGCCAGTCAGCCAGCTGCGCAat > 1:9043500/1‑35 (MQ=255) tcatttcccCCAGCCAGTCAGCCAGCTGCGCAatc > 1:658751‑M1/10‑35 (MQ=255) tcattccccCCAGCCAGTCAGCCAGCTGCGCAatc > 1:148617‑M1/10‑35 (MQ=255) tCAGTTTCACCAGCCAGTCAGCCAGCTGCGCAatc > 1:1776299/1‑35 (MQ=255) ccatttcccCCAGCCAGTCAGCCAGCTGCGCAatc > 1:13295448‑M1/10‑35 (MQ=255) cattccccCCAGCCAGTCAGCCAGCTGCGCAatca > 1:17389041‑M1/9‑35 (MQ=255) cattccccCCAGCCAGTCAGCCAGCTGCGCAatca > 1:9590642‑M1/9‑35 (MQ=255) cAGTTTCACCAGCCAGTCAGCCAGCTGCGCAatca > 1:4885742/1‑35 (MQ=255) cAGTTTCACCAGCCAGTCAGCCAGCTGCGCAatca > 1:5580943/1‑35 (MQ=255) cAGTTTCACCAGCCAGTCAGCCAGCTGCGCAatca > 1:5762132/1‑35 (MQ=255) aGTTTCACCAGCCAGTCAGCCAGCTGCGCAatcat > 1:6435450/1‑35 (MQ=255) aGTTTCACCAGCCAGTCAGCCAGCTGCGCAatcat > 1:10032492/1‑35 (MQ=255) aGTTTCACCAGCCAGTCAGCCAGCTGCGCAatcat > 1:19599895/1‑35 (MQ=255) aGTTTCACCAGCCAGTCAGCCAGCTGCGCAatcat > 1:10778518/1‑35 (MQ=255) tttcccCCAGCCAGTCAGCCAGCTGCGCAatcatc > 1:5939026‑M1/7‑35 (MQ=255) gTTTCACCAGCCAGTCAGCCAGCTGCGCAatcatc > 1:18574304/1‑35 (MQ=255) tttCACCAGCCAGTCAGCCAGCTGCGCAATCATct > 1:2121779/1‑35 (MQ=255) ttcccCCAGCCAGTCAGCCAGCTGCGCAATCATct > 1:15717118‑M1/6‑35 (MQ=255) tccccCCAGCCAGTCAGCCAGCTGCGCAATCATct > 1:14195366‑M1/6‑35 (MQ=255) ttCACCAGCCAGTCAGCCAGCTGCGCAATCATctg > 1:16286203/1‑35 (MQ=255) ccccCCAGCCAGTCAGCCAGCTGCGCAATCATctg > 1:6543773‑M1/5‑35 (MQ=255) tCACCAGCCAGTCAGCCAGCTGCGCAATCATctgc > 1:15757169/1‑35 (MQ=255) cccCCAGCCAGTCAGCCAGCTGCGCAATCATctgc > 1:2944552‑M1/4‑35 (MQ=255) ccCCAGCCAGTCAGCCAGCTGCGCAATCATctgct > 1:9879935‑M1/3‑35 (MQ=255) ccCCAGCCAGTCAGCCAGCTGCGCAATCATctgct > 1:1119316‑M1/3‑35 (MQ=255) ccCCAGCCAGTCAGCCAGCTGCGCAATCATctgct > 1:16159638‑M1/3‑35 (MQ=255) ccCCAGCCAGTCAGCCAGCTGCGCAATCATctgct > 1:18782744‑M1/3‑35 (MQ=255) ccCCAGCCAGTCAGCCAGCTGCGCAATCATctgct > 1:17601446‑M1/3‑35 (MQ=255) cACCAGCCAGTCAGCCAGCTGCGCAATCATctgct > 1:11568144/1‑35 (MQ=255) cACCAGCCAGTCAGCCAGCTGCGCAATCATctgct > 1:14555115/1‑35 (MQ=255) cCCAGCCAGTCAGCCAGGTGCGCAATCATctgctg > 1:625915‑M1/2‑35 (MQ=255) cCCAGCCAGTCAGCCAGCTGCGCAATcatctgatg > 1:11894175‑M1/2‑32 (MQ=255) cCCAGCCAGTCAGCCAGCTGCGCAATCATctgctg > 1:308681‑M1/2‑35 (MQ=255) cCCAGCCAGTCAGCCAGCTGCGCAATCATctgctg > 1:1317581‑M1/2‑35 (MQ=255) cCCAGCCAGTCAGCCAGCTGCGCAATCATctgctg > 1:13926442‑M1/2‑35 (MQ=255) cCCAGCCAGTCAGCCAGCTGCGCAATCATctgctg > 1:5463945‑M1/2‑35 (MQ=255) aCCAGCCAGTCAGCCAGCTGCGCAATCATctgctg > 1:8244786/1‑35 (MQ=255) aCCAGCCAGTCAGCCAGCTGCGCAATCATctgctg > 1:16247302/1‑35 (MQ=255) CCAGCCAGTCAGCCAGCTGCGCAATCATCTGCTGa > 1:12092629‑M1/1‑35 (MQ=255) CCAGCCAGTCAGCCAGCTGCGCAATCATCTGCTGa > 1:14779836‑M1/1‑35 (MQ=255) CCAGCCAGTCAGCCAGCTGCGCAATCATCTGCTGa < 1:1816815‑M1/35‑1 (MQ=255) CCAGCCAGTCAGCCAGCTGCGCAATCATCTGCTGa > 1:3594667‑M1/1‑35 (MQ=255) | TGCATACAAACGGCGTCGTAACCGGTCAGTTTCACCAGCCAGTCAGCCAGCTGCGCAATCATCTGCTGA > REL606/2933091‑2933159 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |