New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2926199 = | 70 (0.680) | 14 (0.180) | 5/36 | NT | 18.0% | coding (378/408 nt) | ygfX | hypothetical protein |
? | REL606 | 3944634 = | 75 (0.970) | intergenic (+23/‑124) | proM/aslB | tRNA‑Pro/predicted regulator of arylsulfatase activity |
CGACAGCATGGACGAAGCTGAATGGCGGGATTTACGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2926238‑2926199 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC > REL606/3944634‑3944667 CGACAGCATGGACGAAGCTGAATGGCGGGATTTAC > 1:14691047/1‑35 CGACAGCATGGACGAAGCTGAATGGCGGGATTTAC > 1:2536282/1‑35 CGACAGCATGGACGAAGCTGAATGGCGGGATTTAC < 1:512508/35‑1 GACAGCATGGACGAAGCTGAATGGCGGGATTTACG < 1:17075073/35‑1 GACAGCATGGACGAAGCTGAATGGCGGGATTTACG > 1:15626863/1‑35 GACAGCATGGACGAAGCTGAATGGCGGGATTTACG > 1:15313238/1‑35 GACAGCATGGACGAAGCTGAATGGCGGGATTTACG > 1:20040379/1‑35 GACAGCATGGACGAAGCTGAATGGCGGGATTTACG < 1:20181009/35‑1 GACAGCATGGACGAAGCTGAATGGCGGGATTTACG < 1:4361522/35‑1 GACAGCATGGACGAAGCTGAATGGCGGGATTTACG < 1:9880861/35‑1 GACAGCATGGACGAAGCTGAATGGCGGGATTTACG < 1:7180690/35‑1 ACAGCATGGACGAAGCTGAATGGCGGGGTTTACGG > 1:800248/1‑35 ACAGCATGGACGAAGCTGAATGGCGGGATTTACGG < 1:3197123/35‑1 ACAGCATGGACGAAGCTGAATGGCGGGATTTACGG < 1:7396395/35‑1 ACAGCATGGACGAAGCTGAATGGCGGGATTTACGG > 1:7114343/1‑35 ACAGCATGGACGAAGCTGAATGGCGGGATTTACGG > 1:1983889/1‑35 ACAGCATGGACGAAGCTGAATGGCGGGATTTACGG > 1:8605421/1‑35 ACAGCATGGACGAAGCTGAATGGCGGGATTTACGG > 1:6561190/1‑35 CAGCATGGACGAAGCTGAATGGCGGGATTTACGGC < 1:13832571/35‑1 CAGCATGGACGAAGCTGAATGGCGGGATTTACGGC > 1:8651830/1‑35 CAGCATGGACGAAGCTGAATGGCGGGATTTACGGC < 1:18376236/35‑1 CAGCATGGACGAAGCTGAATGGCGGGATTTACGGC > 1:9404252/1‑35 CAGCATGGACGAAGCTGAATGGCGGGATTTACGGC < 1:17463137/35‑1 AGCATGGACGAAGCTGAATGGCGGGGTTTACGGCG > 1:18565133/1‑35 AGCATGGACGAAGCTGAATGGCGGGATTTACGGCG < 1:3222838/35‑1 AGCATGGACGAAGCTGAATGGCGGGATTTACGGCG < 1:13517769/35‑1 GCATGGACGAAGCTGAATGGCGGGATTTACGGCGG > 1:20598345/1‑35 GCATGGACGAAGCTGAATGGCGGGATTTACGGCGG < 1:18419885/35‑1 GCATGGACGAAGCTGAATGGCGGGATTTACGGCGG < 1:1008634/35‑1 GCATGGACGAAGCTGAATGGCGGGATTTACGGCGG < 1:10721629/35‑1 GCATGGACGAAGCTGAATGGCGGGATTTACGGCGG > 1:14647747/1‑35 CATGGACGAAGCTGAATGGCGGGGTTTACGGCGGG > 1:944106/1‑35 CATGGACGAAGCTGAATGGCGGGATTTACGGCGGG > 1:17195392/1‑35 CATGGACGAAGCTGAATGGCGGGATTTACGGCGGG > 1:18203178/1‑35 CATGGACGAAGCTGAATGGCGGGATTTACGGCGGG > 1:2241663/1‑35 CATGGACGAAGCTGAATGGCGGGATTTACGGCGGG > 1:8437052/1‑35 CATGGACGAAGCTGAATGGCGGGATTTACGGCGGG > 1:19683994/1‑35 ATGGACGAAGCTGAATGGCGGGGTTTACGGCGGGG > 1:6345010/1‑35 ATGGACGAAGCTGAATGGCGGGATTTACGGGGGGG > 1:5764306/1‑35 ATGGACGAAGCTGAATGGCGGGATTTACGGCGGGG > 1:9743561/1‑35 ATGGACGAAGCTGAATGGCGGGATTTACGGCGGGG > 1:14067716/1‑35 TGGACGAAGCTGAATGGCGGGATTTACGGCGGGtt > 1:10641219/1‑33 GGACGAAGCTGAATGGCGGGGTTTACGGCGGGGTT > 1:13010953/1‑35 GGACGAAGCTGAATGGCGGGATTTACGGCGGGGgt > 1:12932003/1‑33 GGACGAAGCTGAATGGCGGGATTTACGGCGGGGTT > 1:13746432/1‑35 ACGAAGCTGAATGGCGGGATTTACGGCGGGGTTTT > 1:19695177/1‑35 ACGAAGCTGAATGGCGGGATTTACGGCGGGGTTTT > 1:11101133/1‑35 ACGAAGCTGAATGGCGGGATTTACGGCGGGGTTTT > 1:3338402/1‑35 CGAAGCTGAATGGCGGGATTTACGGCGGGGTTTTT > 1:18576839/1‑35 CGAAGCTGAATGGCGGGATTTACGGCGGGGTTTTT > 1:6591885/1‑35 CGAAGCTGAATGGCGGGATTTACGGCGGGGTTTTT > 1:15115286/1‑35 GAAGCTGAATGGCGGGATTTACGGCGGGTTTTTTT > 1:20471068/1‑35 GAAGCTGAATGGCGGGATTTACGGCGGGGTTTTTT > 1:8556805/1‑35 GAAGCTGAATGGCGGGATTTACGGCGGGGCTTTTT > 1:1767606/1‑35 AAGCTGAATGGCGGGATTTACGGCGGGGTTTTTTt > 1:552348/1‑34 AAGCTGAATGGCGGGATTTACGGCGGGGTTTTTTG > 1:14281889/1‑35 AAGCTGAATGGCGGGATTTACGGCGGGGTTTTTTG > 1:448553/1‑35 AGCTGAATGGCGGGATTTACGGCGGGGTTTTTTGT > 1:20229646/1‑35 GCTGAATGGCGGGATTTACGGCGGGGTTTTTTttg > 1:1796005/1‑32 CGGCTGGGTTTTTTGTTTTCTGTGCATTTCGTCAC > 1:582581/1‑35 CGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCAC < 1:1551155/35‑1 CGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCAC < 1:1235366/35‑1 CGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCAC < 1:19739324/35‑1 GGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACT > 1:5518706/1‑35 GGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACT < 1:14537879/35‑1 GGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACT > 1:20548076/1‑35 GGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACT > 1:16731127/1‑35 GCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTT < 1:10543739/35‑1 GCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTT > 1:18261777/1‑35 GCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTT < 1:12134190/35‑1 GCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTT > 1:20108245/1‑35 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT < 1:8421795/35‑1 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT > 1:14427718/1‑35 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT > 1:7968664/1‑35 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT > 1:17941025/1‑35 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT > 1:14295387/1‑35 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT < 1:1235832/35‑1 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT < 1:4829080/35‑1 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT > 1:22223/1‑35 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT > 1:30585/1‑35 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT < 1:9212573/35‑1 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT > 1:13963036/1‑35 CGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTT > 1:16661892/1‑35 GGGGTTTTTTTTTTTCTGTGCATTTCGTCACTTTC > 1:17590941/1‑35 GGGGTTTTTTGTTTTCTGTGCATTTCGTGACTTTC < 1:11631188/35‑1 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTC > 1:18339074/1‑35 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTC > 1:7161502/1‑35 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTC > 1:5763161/1‑35 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTC < 1:5552225/35‑1 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTC > 1:9556799/1‑35 GGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTC > 1:3820495/1‑35 GGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC > 1:8818180/1‑35 GGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC > 1:3556642/1‑35 GGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC > 1:9467498/1‑35 GGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC > 1:3962666/1‑35 CGACAGCATGGACGAAGCTGAATGGCGGGATTTACGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2926238‑2926199 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCC > REL606/3944634‑3944667 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |