New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2487179 = | 54 (0.530) | 11 (0.170) | 3/30 | NT | 21.0% | coding (435/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
? | REL606 | = 3686151 | 49 (0.760) | coding (411/741 nt) | yiaT | hypothetical protein |
CGGTCACGGAGCCGGGGCACAAACCCTTTCTGAACAACGGCTG‑‑‑‑‑‑‑‑‑ < REL606/2487221‑2487179 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacggctgGGTGGGGGA < REL606/3686151‑3686143 CGGTCACGGAGCCGGGGCACAAACCCTTTCTGAAC < 1:11601227/35‑1 GGTCACGGAGCCGGGGCACAAACCCTTTCTGAACA < 1:18741471/35‑1 GGTCACGGAGCCGGGGCACAAACCCTTTCTGAACA < 1:6405202/35‑1 GGTCACGGAGCCGGGGCACAAACCCTTTCTGAACA > 1:8982605/1‑35 GGTCACGGAGCCGGGGCACAAACACTTTCTGAACA > 1:20268524/1‑35 GGTCAAGGAGCCGGGGCACAAACCCTTTCTGAACA > 1:20232321/1‑35 gaCACGGAGCCGGGGCACAAACCCTTTCTGAACAA < 1:5723595/33‑1 GTCACGGAGCCGTGGCACAAACCCTTTCTGAACAA > 1:5271885/1‑35 GTCACGGAGCCGGGGCACAAACCCTTTCTGAACAA > 1:17417023/1‑35 GTCACGGAGCCGGGGCACAAACCCTTTCTGAACAA > 1:20456073/1‑35 GTCACGGAGCCGGGGCACAAACCCTTTCTGAACAA < 1:12539952/35‑1 TCACGGAGCCGGGGCACAAACCCTTTCTGAACAAC > 1:15420970/1‑35 TCACGGAGCCGGGGCACAAACCCTTTCTGAACAAC < 1:19580061/35‑1 TCACGGAGCCGGGGCACAAACCCTTTCTGAACAAC < 1:11786899/35‑1 CACGGAGCCGGGGCACAAGCCCTTTCTGAACAACG < 1:3611750/35‑1 CACGGAGCCGGGGCACAAACCCTTTCTGAACAACG < 1:1564318/35‑1 CACGGAGCCGGGGCACAAACCCTTTCTGAACAACG > 1:7978557/1‑35 CACGGAGCCGGGGCACAAACCCTTTCTGAACAACG > 1:7493899/1‑35 CACGGAGCCGGGGCACAAACCCTTTCTGAACAACG < 1:4341356/35‑1 CACGGAGCCGGGGCACAAACCCTTTCTGAACAACG < 1:17174113/35‑1 CACGGAGCCGGGGCACAAACCCTTTCTGAACAACG > 1:11753287/1‑35 CACGGAGCCGGGGCACAAACCCTTTCTGAACAACG < 1:5635911/35‑1 ACGGAGCCGGGGCACAAACCCTTTCTGAACAACGG > 1:8348519/1‑35 ACGGAGCCGGGGCACAAACCCTTTCTGAACAACGG < 1:4213787/35‑1 ACGGAGCCGGGGCACAAACCCTTTCTGAACAACGG < 1:6456588/35‑1 ACGGAGCCGGGGCACAAACCCTTTCTGAACAACGG > 1:14731371/1‑35 ACGGAGCCGGGGCACAAACCCTTTCTGAACAACGG < 1:15734522/35‑1 ACGGAGCCGGGGCACAAACCCTTTCTGAACAACGG > 1:9268699/1‑35 ACGGAGCCGGGGCACAAACCCTTTCTGAACAACGG < 1:6446455/35‑1 ACGGAGCCGGGGCACAAACCCTTTCTGAACAACGG < 1:1687819/35‑1 ACGGAGCCGGGGCACAAACCCTTTCTGAACAACGG > 1:6026111/1‑35 ACGGAGCCGGGGCACAAACCCTTTCTGAACAACGG > 1:581552/1‑35 ACGGAGCCGGGGCACAAACCCTTTCTGAACAACGG > 1:18615625/1‑35 CGGAGCCGGGGCACAAACCCTTTCTGAACAACGGC > 1:20382094/1‑35 CGGAGCCGGGGCACAAACCCTTTCTGAACAACGGC < 1:6193614/35‑1 GGAGCCGGGGCACAAACCCTTTCTGAACAACGGCT < 1:9053553/35‑1 GGAGCCGGGGCACAAACCCTTTCTGAACAACGGCT > 1:16382054/1‑35 GGAGCCGGGGCACAAACCCTTTCTGAACAACGGCT > 1:15380741/1‑35 GGAGCCGGGGCACAAACCCTTTCTGAACAACGGCT < 1:109414/35‑1 GGAGCCGGGGCACAAACCCTTTCGGAACAACGGCT < 1:13838957/35‑1 GAGCCGGGGCACAAACCCTTTCTGAACAACGGCTG > 1:7348086/1‑35 GAGCCGGGGCACAAACCCTTTCTGAACAACGGCTG > 1:191769/1‑35 GAGCCGGGGCACAAACCCTTTCTGAACAACGGCTG < 1:16838402/35‑1 AGCCGGGGCACAAACCCTTTCTGAACAACGGCTGG > 1:20554898/1‑35 GCCGGGGCACAAACCCTTTCTGAACAACGGCTGGG > 1:317262/1‑35 GCCGGGGCACAAACCCTTTCTGAACAACGGCTGGG > 1:7209281/1‑35 GCCGGGGCACAAACCCTTTCTGAACAACGGCTGGG > 1:18446569/1‑35 CCGGGGCACAAACCCTTTCTGAACAACGGCTGGGg > 1:1819782/1‑34 CGGGGCACAAACCCTTTCTGAACAACGGCTGGGgg > 1:2953027/1‑33 CGGGGCACAAACCCTTTCTGAACAACGGCTGGGgg > 1:18823806/1‑33 CGGGGCACAAACCCTTTCTGAACAACGGCTGGGgg > 1:17844280/1‑33 CGGGGCACAAACCCTTTCTGAACAACGGCTGGGgg > 1:8993166/1‑33 CGGGGCACAAACCCTTTCTGAACAACGGCTGGGgc > 1:19041557/1‑33 GGGGCACAAACCCTTTCTGAACAACGGCTGGGGGG > 1:9670430/1‑35 GGGGCACAAACCCTTTCTGAACAACGGCTGGGGGG > 1:16632978/1‑35 GGGGCACAAACCCTTTCTGAACAACGGCTGGGGGG > 1:10265387/1‑35 GGGCACAAACCCTTTCTGAACAACGGCTGGGGGGG > 1:6588584/1‑35 GGGCACAAACCCTTTCTGAACAACGGCTGGGGGGG > 1:4808518/1‑35 GGGCACAAACCCTTTCTGAACAACGGCTGGGGGGG > 1:2098977/1‑35 GGGCACAAACCCTTTCTGAACAACGGCTGGGGGGG > 1:17169232/1‑35 aGCACAAACCCTTTCTGAACAACGGCTGGGGGGGG > 1:8729375/2‑35 GGCACAAACCCTTTCTGAACAACGGCTGGGGGGGG > 1:20502936/1‑35 GGCACAAACCCTTTCTGAACAACGGCTGGGGGGGG > 1:20131539/1‑35 GGCACAAACCCTTTCTGAACAACGGCTGGGGGGGG > 1:16069554/1‑35 GGCACAAACCCTTTCTGAACAACGGCTGGGGGGGG > 1:9748943/1‑35 GCACAAACCCTTTCTGAACAACGGCTGGGGGGGGG > 1:4497900/1‑35 CACAAACCCTTTCTGAACAACGGCTGGGGGGGGGg > 1:20590733/1‑34 CGGTCACGGAGCCGGGGCACAAACCCTTTCTGAACAACGGCTG‑‑‑‑‑‑‑‑‑ < REL606/2487221‑2487179 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacggctgGGTGGGGGA < REL606/3686151‑3686143 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |