New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 679401 | 75 (0.730) | 6 (0.070) | 3/38 | NT | 13.9% | intergenic (‑174/+207) | metT/asnB | tRNA‑Met/asparagine synthetase B |
? | REL606 | 4198479 = | 15 (0.180) | coding (341/1737 nt) | aceK | bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
Only 100 of 164 total aligned reads displayed.
GTCAATTATTGTTTACTTTGTGTTTTTTCCCCACCCTACAGCCATTCTTTTGTCGTACAGGATGAAATT > REL606/679367‑679435 | gTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:740831‑M1/35‑1 (MQ=255) gTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:4518497‑M1/35‑1 (MQ=255) gTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC > 1:3376382‑M1/1‑35 (MQ=255) gTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:2887047‑M1/35‑1 (MQ=255) gTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:11666233‑M1/35‑1 (MQ=255) gTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:1881850‑M1/35‑1 (MQ=255) gTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:17507184‑M1/35‑1 (MQ=255) gTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC > 1:14266545‑M1/1‑35 (MQ=255) tCAATTATTGTTTACTTTGTGTTTTTTCCCCAccc > 1:3969207/1‑35 (MQ=255) tCAATTATTGTTTACTTTGTGTTTTTTCCCCAccc < 1:20379977/35‑1 (MQ=255) tCAATTATTGTTTACTTTGTGTTTTTTCCCCAccc > 1:19741798/1‑35 (MQ=255) tCAATTATTGTTTACTTTGTGTTTTTTCCCCAccc < 1:15331866/35‑1 (MQ=255) aaTTATTGTTTACTTTGTGTTTTTTCCCCACCCTa > 1:3682025/1‑35 (MQ=255) aaTTATTGTTTACTTTGTGTTTTTTCCCCACCCTa < 1:17561487/35‑1 (MQ=255) aaTTATTGTTTACTTTGTGTTTTTTCCCCACCCTa > 1:13330592/1‑35 (MQ=255) aaTTATTGTTTACTTTGTGTTTTTTCCCCACCCTa > 1:10230371/1‑35 (MQ=255) aaTTATTGTTAACTTTGTGTTTTTTCCCCACCCTa < 1:2352366/35‑1 (MQ=255) attattGTTTACTTTGTGTTTTTTCCCCACCCTAc < 1:6901236/35‑1 (MQ=255) attattGTTTACTTTGTGTTTTTTCCCCACCCTAc > 1:11381286/1‑35 (MQ=255) ttattGTTTGCTTTGTGTTTTTTCCCCACCCTACa < 1:83162/35‑1 (MQ=255) ttattGTTTACTTTGTGTTTTTTCCCCACCCTACa < 1:8768783/35‑1 (MQ=255) ttattGTTTACTTTGTGTTTTTTCCCCACCCTACa < 1:19813581/35‑1 (MQ=255) tattGTTTACTTTGTGTTTTTTCCCCACCCTACAg > 1:6329509/1‑35 (MQ=255) tattGTTTACTTTGTGTTTTTTCCCCACCCTACAg < 1:9527361/35‑1 (MQ=255) tattGTTTACTTTGTGTTTTTTCCCCACCCTACAg < 1:14940596/35‑1 (MQ=255) tattGTTTACTTTGTGTTTTTTCCCCACCCTACAg < 1:19311081/35‑1 (MQ=255) attGTTTACTTTGTGTTTTTTCCCCACCCTACAGc > 1:20371286/1‑35 (MQ=255) attGTTTACTTTGTGTTTTTTCCCCACCCTACAGc > 1:14148719/1‑35 (MQ=255) attGTTTACTTTGTGTTTTTTCCCCACACTACAGc < 1:6256197/35‑1 (MQ=255) attGTTTACTTTGTGTTTTTTCCCCACACTACAGc < 1:13833389/35‑1 (MQ=255) ttGTTTACTTTGTGTTTTTTCCCCACCCTACAGcc > 1:16129196/1‑35 (MQ=255) ttGTTTACTTTGTGTTTTTTCCCCACCCTACAGcc > 1:13905400/1‑35 (MQ=255) tGTTTACTTTGTGTTTTTTCCCCACCCTACAGCCa > 1:18536493/1‑35 (MQ=255) gTTTACTTTGTGTTTTTTCCCCACCCTACAGCCAt > 1:15296283/1‑35 (MQ=255) gTTTACTTTGTGTTTTTTCCCCACCCTACAGCCAt > 1:18904783/1‑35 (MQ=255) gTTTACTTTGTGTTTTTTCCCCACCCTACAGCCAt > 1:18788991/1‑35 (MQ=255) tttACTTTGTGTTTTTTCCCCACCCTACAGCCAtt > 1:2798734/1‑35 (MQ=255) tttACTTTGTGTTTTTTCCCCACCCTACAGCCAtt > 1:13685628/1‑35 (MQ=255) cTTTGTGTTTTTTCCCCACCCTACAGCCATTCttt > 1:17983375/1‑35 (MQ=255) cTTTGTGTTTTTTCCCCACCCTACAGCCATTCttt > 1:1635784/1‑35 (MQ=255) ttGTGTTTTTTCCCCACCCTACAGCCATTCTTTTg > 1:12000319/1‑35 (MQ=255) tgtgTTTTTTCCCCACCCTACAGCCATTCTTTTGt > 1:1797933/1‑35 (MQ=255) tgtgTTTTTTCCCCACCCTACAGCCATTCTTTTGt > 1:17020753/1‑35 (MQ=255) gtgtTTTTTCCCCACCCTACAGCCATTCTTTTGTc > 1:2910471/1‑35 (MQ=255) gtgtTTTTTCCCCACCCTACAGCCATTCTTTTGTc > 1:19388866/1‑35 (MQ=255) gtgtTTTTTCCCCACCCTACAGCCATTCTTTTGTc > 1:18499687/1‑35 (MQ=255) gtgtTTTTTCCCCACCCTACAGCCATTCTTTTGTc > 1:18070015/1‑35 (MQ=255) tttttttcCCCCCCCCCCCAGCCATTCTTTTGTCg < 1:3857286/33‑1 (MQ=16) tgtTTTTTCCCCACCgctcgcttactcccgagcgg < 1:7807670‑M1/35‑21 (MQ=255) tgtTTTTTCCCCACCCTACAGCCATTCTTTTGTCg > 1:12601142/1‑35 (MQ=255) tgtTTTTTCCCCACCCTACAGCCATTCTTTTGTCg > 1:7957614/1‑35 (MQ=255) gtttttttccCCACCgctcgcttactcccgagcgg < 1:16845609‑M1/33‑21 (MQ=255) gtTTTTTCCCCACCCTACAGCCATTCTTTTGTCGt > 1:1607088/1‑35 (MQ=255) ttttttCCCCACCgctcgcttactcccgagcggct < 1:2158653‑M1/35‑23 (MQ=255) ttttttCCCCACCCTACAGCCATTCTTTTGTCGTa > 1:78970/1‑35 (MQ=255) ttttttCCCCACCCTACAGCCATTCTTTTGTCGTa > 1:3786174/1‑35 (MQ=255) ttttttCCCCACCCTACAGCCATTCTTTTGTCGTa > 1:20090102/1‑35 (MQ=255) tttttcCCCCACCgctcgcttactcccgagcggct < 1:12673570‑M1/35‑23 (MQ=255) tttgCCCCACCgctcgcttactcccgagcggcttt < 1:5190486‑M1/35‑25 (MQ=255) atttcCCCACCgctcgcttactcccgagcggcttt < 1:15143312‑M1/34‑25 (MQ=255) tttCCCCACCCTACAGCCATTCTTTTGTCGTACAg > 1:3472268/1‑35 (MQ=255) tttCCCCACCCTACAGCCATTCTTTTGTCGTACAg > 1:20430389/1‑35 (MQ=255) tccccccCCCCCCCAGCCATTCTTTTGTCGTACAg < 1:2848068/32‑1 (MQ=19) cccccccCCCCCCCAGCCATTCTTTTGTCGTACAg < 1:12448000/32‑1 (MQ=19) ttgcccaccgctcgcttactcccgagcggcttttt < 1:17702553‑M1/32‑27 (MQ=255) ttCCCCACCCTACAGCCATTCTTTTGTCGTAAAgg > 1:6947663/1‑35 (MQ=255) tCCCCACCCTACAGCCATTCTTTTGTCGTACAGGa > 1:20030508/1‑35 (MQ=255) ccgccaccgctcgcttactcccgagcggcttttta < 1:9636249‑M1/32‑28 (MQ=255) ccccACCgctcgcttactcccgagcggctttttat < 1:10364888‑M1/35‑29 (MQ=255) ccccACCgctcgcttactcccgagcggctttttat < 1:9023181‑M1/35‑29 (MQ=255) ccccACCCTACAGCCATTCTTTTGTCGTACAGGAt > 1:11784027/1‑35 (MQ=255) cccACCCTACAGCCATTCTTTTGTCGTACAGGATg > 1:11159185/1‑35 (MQ=255) cccACCCTACAGCCATTCTTTTGTCGTACAGGATg > 1:14674349/1‑35 (MQ=255) cccACCCTACAGCCATTCTTTTGTCGTACAGGATg > 1:4675729/1‑35 (MQ=255) ccACCgctcgcttactcccgagcggctttttatct < 1:20298390‑M1/35‑31 (MQ=255) ccACCCTACAGCCATTCTTTTGTCGTACAGGATGa > 1:10457588/1‑35 (MQ=255) ccACCCTACAGCCATTCTTTTGTCGTACAGGATGa > 1:14497349/1‑35 (MQ=255) ccACCCTACAGCCATTCTTTTGTCGTACAGGATGa > 1:5657783/1‑35 (MQ=255) cACCgctcgcttactcccgagcggctttttatctt < 1:10280083‑M1/35‑32 (MQ=255) cACCCTACAGCCATTCTTTTGTCGTACAGGATGaa > 1:1686880/1‑35 (MQ=255) cACCCTACAGCCATTCTTTTGTCGTACAGGATGaa > 1:18982989/1‑35 (MQ=255) cACCCTACAGCCATTCTTTTGTCGTACAGGATGaa > 1:8444867/1‑35 (MQ=255) cccgctcgcttactcccgagcggctttttatcttt < 1:1148128‑M1/34‑33 (MQ=255) aCCgctcgcttactcccgagcggctttttatcttt < 1:15247101‑M1/35‑33 (MQ=255) aCCgctcgcttactcccgagcggctttttatcttt < 1:17905042‑M1/35‑33 (MQ=255) aCCgctcgcttactcccgagcggctttttatcttt < 1:4841092‑M1/35‑33 (MQ=255) aCCgctagcttactcccgagcggctttttatcttt < 1:5207247‑M1/35‑33 (MQ=255) aCCCTACAGCCATTCTTTTGTCGTACAGGATGaaa > 1:7272816/1‑35 (MQ=255) aCCCTACAGCCATTCTTTTGTCGTACAGGATGaaa > 1:18581718/1‑35 (MQ=255) aCCCTACAGCCATTCTTTTGTCGTACAGGATGaaa > 1:5280586/1‑35 (MQ=255) ccgctcgcttactcccgagcggctttttttcttta > 1:6511164‑M1/1‑2 (MQ=255) ccgctcgcttactcccgagcggctttttttcttta > 1:13281299‑M1/1‑2 (MQ=255) ccgctcgcttactcccgagcggctttttatcttta > 1:9581365‑M1/1‑2 (MQ=255) ccgctcgcttactcccgagcggctttttatcttta < 1:2505439‑M1/35‑34 (MQ=255) cccTACAGCCATTCTTTTGTCGTACAGGATGAAAt > 1:17896251/1‑35 (MQ=255) cgctcgcttactcccgagcggctttttatctttag < 1:3159706‑M1/35‑35 (MQ=255) cgctcgcttactcccgagcggctttttatctttag < 1:2060379‑M1/35‑35 (MQ=255) ccTACAGCCATTCTTTTGTCGTACAGGATGAAAtt > 1:74919/1‑35 (MQ=255) ccTACAGCCATTCTTTTGTCGTACAGGATGAAAtt > 1:4104565/1‑35 (MQ=255) ccTACAGCCATTCTTTTGTCGTACAGGATGAAAtt > 1:3157260/1‑35 (MQ=255) | GTCAATTATTGTTTACTTTGTGTTTTTTCCCCACCCTACAGCCATTCTTTTGTCGTACAGGATGAAATT > REL606/679367‑679435 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |