New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2454481 | 67 (0.650) | 14 (0.140) | 6/46 | NT | 15.1% | coding (158/342 nt) | ECB_02307 | conserved hypothetical protein |
? | REL606 | = 4471806 | 97 (0.940) | coding (1485/1503 nt) | yjgR | predicted ATPase |
Only 100 of 146 total aligned reads displayed.
CAACAAATTAAAGAGATTGTAGACACTAGCGGCAGTGCTGAAGACAAGCAAAAACAGGCCGAATTGATT > REL606/2454447‑2454515 | caacaaATTAAAGAGATTGTAGACACTAGCGGCAg > 1:773287/1‑35 (MQ=255) aacaaATTAAAGAGATTGTAGACACTAGCGGCAGg > 1:18153197‑M1/1‑34 (MQ=255) acaaATTAAAGAGATTGTAGACACTAGCGGCAGgg > 1:14720496‑M1/1‑33 (MQ=255) acaaATTAAAGAGATTGTAGACACTAGCGGCAGgg > 1:4599232‑M1/1‑33 (MQ=255) acaaATAAAAGAGATTGTAGACACTAGCGGCAGTg < 1:18099591/35‑1 (MQ=255) aaaTTAAAGAGATTGTAGACACTAGCGGCAGgggg > 1:13578383‑M1/1‑31 (MQ=255) aaaTTAAAGAGATTGTAGACACTAGCGGCAGgggg > 1:16034747‑M1/1‑31 (MQ=255) aaaTTAAAGAGATTGTAGACACTAGCGGCAGgggg > 1:18043660‑M1/1‑31 (MQ=255) aaaTTAAAGAGATTGTAGACACTAGCGGCAGgggg > 1:8705271‑M1/1‑31 (MQ=255) aaaTTAAAGAGATTGTAGACACTAGCGGCAGgggc > 1:19682972‑M1/1‑31 (MQ=255) aaaTTAAAGAGATTGTAGACACTAGCGGCAGTGCt < 1:6598303/35‑1 (MQ=255) aaaTTAAAGAGATTGTAGACACTAGCGGCAGTGCt < 1:13052169/35‑1 (MQ=255) aaaTAAAAGAGATTGTAGACACTAGCGGCAGTGCt < 1:14360757/35‑1 (MQ=255) aaTTAAAGAGATTGTAGACACTAGCGGCAGggggg > 1:6482195‑M1/1‑30 (MQ=255) aaTTAAAGAGATTGTAGACACTAGCGGCAGggggg > 1:4758890‑M1/1‑30 (MQ=255) aaTTAAAGAGATTGTAGACACTAGCGGCAGTGCTg < 1:4043896/35‑1 (MQ=255) aaTTAAAGAGATTGTAGACACTAGCGGCAGTGCTg < 1:6089005/35‑1 (MQ=255) aTTAAAGAGATTGTAGACACTAGCGGCAGgggggg > 1:3149231‑M1/1‑29 (MQ=255) aTTAAAGAGATTGTAGACACTAGCGGCAGgggggg > 1:12652978‑M1/1‑29 (MQ=255) aTTAAAGAGATTGTAGACACTAGCGGCAGgggggg > 1:20032867‑M1/1‑29 (MQ=255) aTTAAAGAGATTGTAGACACTAGCGGCAGgggggg > 1:18500721‑M1/1‑29 (MQ=255) aTTAAAGAGATTGTAGACACTAGCGGCAGTGCTGa < 1:11557172/35‑1 (MQ=255) ttAAAGAGATTGTAGACACTAGCGGCAGggggggg > 1:4349664‑M1/1‑28 (MQ=255) aaaGAGATTGTAGACACTAGCGGCAGggggggggg > 1:406835‑M1/1‑26 (MQ=255) aaaGAGATTGTAGACACTAGCGGCAGgggggggga > 1:8733079‑M1/1‑26 (MQ=255) aaaGAGATTGTAGACACTAGCGGCAGggggggagg > 1:15451741‑M1/1‑26 (MQ=255) aaaGAGATTGTAGACACTAGCGGCAGTGCTGAAGa < 1:10277425/35‑1 (MQ=255) aaGAGATTGTAGACACTAGCGGCAGgggggggggg > 1:14770063‑M1/1‑25 (MQ=255) aaGAGATTGTAGACACTAGCGGCAGggggggggag > 1:373731‑M1/1‑25 (MQ=255) aaGAGATTGTAGACACTAGCGGCAGTGCTGAAGAc < 1:4173394/35‑1 (MQ=255) aaGAGATTGTAGACACTAGCGGCAGTGCTGAAGAc < 1:17067939/35‑1 (MQ=255) aaGAGATTGTAGACACTAGCGGCAGTGCTGAAGAc < 1:8100544/35‑1 (MQ=255) agagATTGTAGACACTAGCGGCAGggggggggggg > 1:1797968‑M1/1‑24 (MQ=255) agagATTGTAGACACTAGCGGCAGgggggggggga > 1:5486306‑M1/1‑24 (MQ=255) agagATTGTAGACACTAGCGGCAGgggggggggac > 1:6810944‑M1/1‑24 (MQ=255) agagATTGTAGACACTAGCGGCAGggggggggaga > 1:7070088‑M1/1‑24 (MQ=255) agagATTGTAGACACTAGCGGCAGTGCTGAAGACa < 1:2245233/35‑1 (MQ=255) agagATTGTAGACACTAGCGGCAGTGCTGAAGACa < 1:5732967/35‑1 (MQ=255) agagATTGTAGACACTAGCGGCAGTGCTGAAGACa < 1:11267322/35‑1 (MQ=255) gagaTTGTAGACACTAGCGGCAGTGCTGAAGACaa < 1:19486179/35‑1 (MQ=255) ctgaTTGTAGACACTAGCGGCAGTGCTGAAGACaa < 1:8336151/33‑1 (MQ=255) agaTTGTAGACACTAGCGGCAGTGCTGAAGACAAg < 1:7406920/35‑1 (MQ=255) agaTTGTAGACACTAGCGGCAGTGCTGAAGACAAg < 1:8305640/35‑1 (MQ=255) agaTTGTAGACACTAGAGGCAGTGCTGAAGACAAg < 1:3170725/35‑1 (MQ=255) gaTTGTAGACACTAGCGGCAGTGCTGAAGACAAGc < 1:4898163/35‑1 (MQ=255) gaTTGTAGACACTAGCGGCAGTGCTGAAGACAAGc < 1:6576558/35‑1 (MQ=255) aTTGTAGACACTAGCGGCAGggggggggagaagaa > 1:7490360‑M1/1‑20 (MQ=255) aTTGTAGACACTAGCGGCAGTGCTGAAGACAAGCa < 1:3605161/35‑1 (MQ=255) aTTGTAGACACTAGCGGCAGTGCTGAAGACAAGCa < 1:6955081/35‑1 (MQ=255) aTTGTAGACACTAGCGGCAGTGCTGAAGACAAGCa < 1:2293163/35‑1 (MQ=255) ttGTAGACACTAGCGGCAGTGCTGAAGACAAGCaa < 1:2521312/35‑1 (MQ=255) ttGTAGACACTAGCGGCAGTGCTGAAGACAAGCaa < 1:16719887/35‑1 (MQ=255) ttGTAGACAATAGCGGCAGTGCTGAAGACAAGCaa < 1:5993544/35‑1 (MQ=255) tGTAGACACTAGCGGCAGTGCTGAAGACAAGCaaa < 1:15315138/35‑1 (MQ=255) gggaGACACTAGCGGCAGTGCTGAAGACAAGCaaa < 1:17432278/32‑1 (MQ=255) gTAGACACTAGCGGCAGTGCTGAAGACAAGCaaaa < 1:6721732/35‑1 (MQ=255) gTAGACACTAGCGGCAGTGCTGAAGACAAGCaaaa < 1:15088946/35‑1 (MQ=255) aGACACTAGCGGCAGTGCTGAAGACAAGCAAAAAc < 1:11816164/35‑1 (MQ=255) aGACACTAGCGGCAGTGCTGAAGACAAGCAAAAAc < 1:17258444/35‑1 (MQ=255) aGACACTAGCGGCAGTGCTGAAGACAAGCAAAAAc < 1:15945058/35‑1 (MQ=255) gACACTAGCTGCAGTGCTGAAGACAAGCAAAAACa > 1:2514762/1‑35 (MQ=255) gACACTAGCGGCAGTGCTGAAGACAAGCAAAAACa < 1:15254963/35‑1 (MQ=255) acacTAGCGGCAGTGCTGAAGACAAGCAAAAACAg < 1:2739505/35‑1 (MQ=255) acacTAGCGGCAGTGCTGAAGACAAGCAAAAACAg < 1:20099034/35‑1 (MQ=255) cacTAGCGGCAGTGCTGAAGACAAGCAAAAACAgg < 1:13915003/35‑1 (MQ=255) acTAGCGGCAGTGCTGAAGACAAGCAAAAACAGGc < 1:2168136/35‑1 (MQ=255) cTAGCGGCAGTGCTGAAGACAAGCAAAAACAGGcc < 1:10666528/35‑1 (MQ=255) tAGCGGCAGTGCTGAAGACAAGCAAAAACAGGCCg < 1:18725688/35‑1 (MQ=255) tAGCGGCAGTGCTGAAGACAAGCAAAAACAGGCCg < 1:11826599/35‑1 (MQ=255) aGCGGCAGTGCTGAAGACAAGCAAAAACAGGCCGa < 1:15698033/35‑1 (MQ=255) aGCGGCAGTGCTGAAGACAAGCAAAAACAGGCCGa < 1:13323682/35‑1 (MQ=255) gCGGCAGTGCTGAAGACAAGCAAAAACAGGCCGaa < 1:5319799/35‑1 (MQ=255) gCGGCAGTGCTGAAGACAAGCAAAAACAGGCCGaa < 1:16376356/35‑1 (MQ=255) gCGGCAGTGCTGAAGACAAGCAAAAACAGGCCGaa < 1:19319571/35‑1 (MQ=255) cGGCAGTGCTGAAGACAAGCAAAAACAGGCCGAAt < 1:18745243/35‑1 (MQ=255) ggCAGTGCTGAAGACAAGCAAAAACAGGCCGAAtt < 1:1082690/35‑1 (MQ=255) ggCAGTGCTGAAGACAAGCAAAAACAGGCCGAAtt < 1:2032460/35‑1 (MQ=255) ggCAGTGCTGAAGACAAGCAAAAACAGGCCGAAtt < 1:2734892/35‑1 (MQ=255) gCAGTGCTGAAGACAAGCAAAAACAGGCCGAATTg > 1:10613590/1‑35 (MQ=255) gCAGTGCTGAAGACAAGCAAAAACAGGCCGAATTg > 1:100742/1‑35 (MQ=255) gCAGTGCTGAAGACAAGCAAAAACAGGCCGAATTg > 1:9770484/1‑35 (MQ=255) gCAGTGCTGAAGACAAGCAAAAACAGGCCGAATTg < 1:4897439/35‑1 (MQ=255) gCAGTGCTGAAGACAAGCAAAAACAGGCCGAATTg > 1:15724498/1‑35 (MQ=255) cAGTGCTGAAGACAAGCAAAAACAGGCCGAATTGa < 1:9921706/35‑1 (MQ=255) cAGTGCTGAAGACAAGCAAAAACAGGCCGAATTGa > 1:7061437/1‑35 (MQ=255) cAGTGCTGAAGACAAGCAAAAACAGGCCGAATTGa > 1:4545030/1‑35 (MQ=255) cAGTGCTGAAGACAAGCAAAAACAGGCCGAATTGa > 1:3540276/1‑35 (MQ=255) cAGTGCTGAAGACAAGCAAAAACAGGCCGAATTGa > 1:19535100/1‑35 (MQ=255) cAGTGCTGAAGACAAGCAAAAACAGGCCGAATTGa < 1:19306713/35‑1 (MQ=255) aGTGCTGAAGACAAGCAAAAACAGGCCGAATTGAt > 1:7138888/1‑35 (MQ=255) aGTGCTGAAGACAAGCAAAAACAGGCCGAATTGAt > 1:17355106/1‑35 (MQ=255) aGTGCTGAAGACAAGCAAAAACAGGCCGAATTGAt < 1:14698743/35‑1 (MQ=255) aGTGCTGAAGACAAGCAAAAACAGGCCGAATTGAt > 1:13152263/1‑35 (MQ=255) aGTGCTGAAGACAAGCAAAAACAGGCCGAATTGAt > 1:10020899/1‑35 (MQ=255) gTGCTGAAGACAAGCAAAAACAGGCCGAATTGAtt < 1:5866485/35‑1 (MQ=255) gTGCTGAAGACAAGCAAAAACAGGCCGAATTGAtt < 1:5079679/35‑1 (MQ=255) gTGCTGAAGACAAGCAAAAACAGGCCGAATTGAtt > 1:4646994/1‑35 (MQ=255) gTGCTGAAGACAAGCAAAAACAGGCCGAATTGAtt < 1:2088063/35‑1 (MQ=255) gTGCTGAAGACAAGCAAAAACAGGCCGAATTGAtt < 1:19750865/35‑1 (MQ=255) gTGCTGAAGACAAGCAAAAACAGGCCGAATTGAtt < 1:11263651/35‑1 (MQ=255) | CAACAAATTAAAGAGATTGTAGACACTAGCGGCAGTGCTGAAGACAAGCAAAAACAGGCCGAATTGATT > REL606/2454447‑2454515 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |