New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 370831 = | 66 (0.640) | 3 (0.050) | 3/28 | NT | 8.4% | intergenic (+23/‑96) | phoA/psiF | bacterial alkaline phosphatase/hypothetical protein |
? | REL606 | 4533970 = | 27 (0.450) | coding (156/1461 nt) | uxuB | D‑mannonate oxidoreductase, NAD‑binding |
Only 100 of 117 total aligned reads displayed.
ATACCCATCATCTGCTGGAAAGCACCGACAGCGACTGGGGCATCTGCGAAGTTAACCTGATGCCAGGCA > REL606/4533936‑4534004 | ataCCCATCATCTGCTGGAAAGCACCGACAGCGAc > 1:2304575/1‑35 (MQ=255) ataCCCATCATCTGCTGGAAAGCACCGACAGCGAc > 1:15116319/1‑35 (MQ=255) aCCCATCATCTGCTGGAAAGCACCGACAGCTACTg > 1:16984321/1‑35 (MQ=255) aCCCATCATCTGCTGGAAAGCACCGACAGCGACTg > 1:19793685/1‑35 (MQ=255) aCCCATCATCTGCTGGAAAGCACCGACAGCGACTg > 1:7907181/1‑35 (MQ=255) aCCCATCATCTGCTGGAAAGCACCGACAGCGACTg > 1:20368951/1‑35 (MQ=255) cccATCATCTGCTGGAAAGCACCGACAGCGACTgg > 1:5458687/1‑35 (MQ=255) cccATCATCTGCTGGAAAGCACCGACAGCGACTgg > 1:20266587/1‑35 (MQ=255) cccATCATCTGCTGGAAAGCACCGACAGCGACCgg > 1:4300464/1‑35 (MQ=255) catcatCTGCTGGAAAGCACCGACAGCGACTgggg > 1:3307681/1‑35 (MQ=255) catcatCTGCTGGAAAGCACCGACAGCGACTgggg > 1:17373135/1‑35 (MQ=255) tcatcTGCTGGAAAGCACCGACAGCGACTGGGGCa > 1:1856403/1‑35 (MQ=255) tcatcTGCTGGAAAGCACCGACAGCGACTGGGGCa > 1:10412673/1‑35 (MQ=255) atcTGCTGGAAAGCACCGACAGCGACTGGGGCATc > 1:18257702/1‑35 (MQ=255) atcTGCTGGAAAGCACCGACAGCGACTGGGGCATc > 1:5806958/1‑35 (MQ=255) tcTGCTGGAAAGCACCGACAGCGACTGGGGCATCt > 1:17222124/1‑35 (MQ=255) ctgctgGAAAGCACCGACAGCGACTGGGGCATCTg > 1:19686263/1‑35 (MQ=255) ctgctgGAAAGCACCGACAGCGACTGGGGCATCTg > 1:12684462/1‑35 (MQ=255) tgctgGAAAGCACCGACAGCGACTGGGGCATCTGc > 1:5346891/1‑35 (MQ=255) tgctgGAAAGCACCGACAGCGACTGGGGCATCTGc > 1:11178260/1‑35 (MQ=255) tgctgGAAAGCACCGACAGCGACTGGGGCATCTGc > 1:8551616/1‑35 (MQ=255) tgctgGAAAGCACCGACAGCGACTGGGGCATCTGc > 1:16879296/1‑35 (MQ=255) gctgGAAAGCACCGACAGCGACTGGGGCATCTGCg > 1:14394609/1‑35 (MQ=255) gctgGAAAGCACCGACAGCGACTGGGGCATCTGCg > 1:16239293/1‑35 (MQ=255) gctgGAAAGCACCGACAGCGACTGGGGCATCTGCg > 1:11984013/1‑35 (MQ=255) ctgGAAAGCACCGACAGCGACTGGGGCATCTGCGa > 1:2096046/1‑35 (MQ=255) ctgGAAAGCACCGACAGCGACTGGGGCATCTGCGa > 1:11151649/1‑35 (MQ=255) ctgGAAAGCACCGACAGCGACTGGGGCATCTGCGa > 1:17448598/1‑35 (MQ=255) ctgGAAAGCACCGACAGCGACTGGGGCATCTGCGa > 1:4715226/1‑35 (MQ=255) aaaaccccccgacagcgaCTGGGGCATCTGCGAAg < 1:11477547‑M2/17‑1 (MQ=255) gAAAGCACCGACAGCGACTGGGGCATCTGCGAAGt > 1:15410065/1‑35 (MQ=255) gAAAGCACCGACAGCGACTGGGGCATCTGCGAAGt > 1:10285208/1‑35 (MQ=255) aaccccccgacagcgaCTGGGGCATCTGCGAAGtt < 1:11891280‑M2/19‑1 (MQ=255) aaaGCACCGACAGCGACTGGGGCATCTGCGAAGtt > 1:6148490/1‑35 (MQ=255) aaGCACCGACAGCGACTGGGGCATCTGCGAAGTTa > 1:17934567/1‑35 (MQ=255) ccccccgacagcgaCTGGGGCATCTGCGAAGTTaa < 1:16723651‑M2/21‑1 (MQ=255) aGCACCGACAGCGACTGGGGCATCTGCGAAGTTaa > 1:3783926/1‑35 (MQ=255) aGCACCGACAGCGACTGGGGCATCTGCGAAGTTaa > 1:12374875/1‑35 (MQ=255) gCACCGACAGCGACTGGGGCATCTGCGAAGTTAAc > 1:7553408/1‑35 (MQ=255) cccccgacagcgaCTGGGGCATCTGCGAAGTTAAc < 1:11621065‑M2/22‑1 (MQ=255) cccccgacagcgaCTGGGGCATCTGCGAAGTTAAc < 1:5421707‑M2/22‑1 (MQ=255) cccccgacagcgaCTGGGGCATCTGCGAAGTTAAc < 1:1338585‑M2/22‑1 (MQ=255) cccccgacagcgaCTGGGGCATCTGCGAAGTTAAc < 1:17031703‑M2/22‑1 (MQ=255) cccccGCCAGCGACTGGGGCATCTGCGAAGTTAAc < 1:17928383/32‑1 (MQ=37) ccccgacagcgaCTGGGGCATCTGCGAAGTTAAcc < 1:3015760‑M2/23‑1 (MQ=255) ccccgacagcgaCTGGGGCATCTGCGAAGTTAAcc < 1:7355381‑M2/23‑1 (MQ=255) ccccgacagcgaCTGGGGCATCTGCGAAGTTAAcc < 1:5892746‑M2/23‑1 (MQ=255) cACCGACAGCGACTGGGGCATCTGCGAAGTTAAcc > 1:759038/1‑35 (MQ=255) cccgacagcgaCTGGGGCATCTGCGAAGTTAATCt < 1:4076519‑M2/24‑1 (MQ=255) aCCGACAGCGACTGGGGCATCTGCGAAGTTAACCt > 1:13686081/1‑35 (MQ=255) aCCGACAGCGACTGGGGCATCTGCGAAGTTAACCt > 1:19131070/1‑35 (MQ=255) aCCGACAGCGACTGGGGCATCTGCGAAGTTAACCt > 1:682976/1‑35 (MQ=255) ccgccagcgaCTGGGGCATCTGCGAAGTTAACCTg < 1:2040954‑M2/25‑1 (MQ=255) ccgacagcgaCTGGGGCATCTGCGAAGTTAACCTg < 1:283572‑M2/25‑1 (MQ=255) ccgacagcgaCTGGGGCATCTGCGAAGTTAACCTg > 1:6139652‑M2/11‑35 (MQ=255) ccgacagcgaCTGGGGCATCTGCGAAGTTAACCTg < 1:13641741‑M2/25‑1 (MQ=255) ccgacagcgaCTGGGGCATCTGCGAAGTTAACCTg > 1:18616039‑M2/11‑35 (MQ=255) cagacagcgaCTGGGGCATCTGCGAAGTTAACCTg < 1:7887687‑M2/25‑1 (MQ=255) cgccagcgaCTGGGGCATCTGCGAAGTTAACCTGa < 1:6750503‑M2/26‑1 (MQ=255) cgacagcgaCTGGGGCATCTGCGAAGTTAACCTGa > 1:11068150‑M2/10‑35 (MQ=255) cgacagcgaCTGGGGCATCTGCGAAGTTAACCTGa > 1:10462819‑M2/10‑35 (MQ=255) cgacagcgaCTGGGGCATCTGCGAAGTTAACCTGa > 1:8737902‑M2/10‑35 (MQ=255) cgacagcgaCTGGGGCATCTGCGAAGTTAACCTGa < 1:9071574‑M2/26‑1 (MQ=255) cgacagcgaCTGGGGCATCTGCGAAGTTAACCTGa > 1:9629643‑M2/10‑35 (MQ=255) gacagcggCTGGGGCATCTGCGAAGTTAACCTGAt < 1:5813243‑M2/27‑1 (MQ=255) gacagcgaCTGGGGCATCTGCGAAGTTAACCTGAt < 1:7061161‑M2/27‑1 (MQ=255) gacagcgaCTGGGGCATCTGCGAAGTTAACCTGAt < 1:6979392‑M2/27‑1 (MQ=255) gacagcgaCTGGGGCATCTGCGAAGTTAACCTGAt < 1:17276307‑M2/27‑1 (MQ=255) gacagcgaCTGGGGCATCTGCGAAGTTAACCTGAt < 1:19483399‑M2/27‑1 (MQ=255) acagcgaCTGGGGCATCTGCGAAGTTAACCTGATg > 1:16026546‑M2/8‑35 (MQ=255) acagcgaCTGGGGCATCTGCGAAGTTAACCTGATg > 1:18577186‑M2/8‑35 (MQ=255) aCAGCGACTGGGTCATCTGTGAAGTTAACCTGATg > 1:2024936/1‑35 (MQ=37) cagcgaCTGGGGCATCTGCGAAGTTGACCTGATGc > 1:17194130‑M2/7‑35 (MQ=255) cagcgaCTGGGGCATCTGCGAAGTTAACCTGATGc > 1:10964908‑M2/7‑35 (MQ=255) cagcgaCTGGGGCATCTGCGAAGTTAACCTGATGc < 1:10113770‑M2/29‑1 (MQ=255) cagcgaCTGGGGCATCTGCGAAGTTAACCTGATGc < 1:6167700‑M2/29‑1 (MQ=255) agcgaCTGGGGCATCTGCGAAGTTAACCTGATGcc > 1:2843641‑M2/6‑35 (MQ=255) agcgaCTGGGGCATCTGCGAAGTTAACCTGATGcc > 1:16682704‑M2/6‑35 (MQ=255) agcgaCTGGGGCATCTGCGAAGTTAACCTGATGcc > 1:14308570‑M2/6‑35 (MQ=255) agcgaCTGGGGCATCTGCGAAGTTAACCTGATGcc > 1:11755400‑M2/6‑35 (MQ=255) gcgaCTGGGGCATCTGCGAAGTTAACCTGATGCCa < 1:3655244‑M2/31‑1 (MQ=255) gcgaCTGGGGCATCTGCGAAGTTAACCTGATGCCa < 1:19236408‑M2/31‑1 (MQ=255) cgaCTGGGGCATCTGCGAAGTTAACGTGATGCCAg < 1:5096554‑M2/32‑1 (MQ=255) cgaCTGGGGCATCTGCGAAGTTAACCTGATGCCAg < 1:16794470‑M2/32‑1 (MQ=255) gaCTGGGGCATCTGCGAAGTTAACCTGATGCCAgg < 1:20540004‑M2/33‑1 (MQ=255) gaCTGGGGCATCTGCGAAGTTAACCTGATGCCAgg > 1:7949074‑M2/3‑35 (MQ=255) gaCTGGGGCATCTGCGAAGTTAACCTGATGCCAgg > 1:5329754‑M2/3‑35 (MQ=255) gaCTGGGGCATCTGCGAAGTTAACCTGATGCCAgg > 1:116778‑M2/3‑35 (MQ=255) gaCTGGGGCATCTGCGAAGTTAACCTGATGCCAgg > 1:2948459‑M2/3‑35 (MQ=255) gaCTGGGGCATCTGCGAAGTTAACCTGATGCCAgg > 1:12566317‑M2/3‑35 (MQ=255) aCTGGGGCATCTGCGAAGTTAACCTGATGCCAGGc < 1:11161269‑M2/34‑1 (MQ=255) aCTGGGGCATCTGCGAAGTTAACCTGATGCCAGGc > 1:11900254‑M2/2‑35 (MQ=255) aCTGGGGCATCTGCGAAGTTAACCTGATGCCAGGc > 1:6832221‑M2/2‑35 (MQ=255) aCTGGGGCATCTGCGAAGTTAACCTGATGCCAGGc > 1:9586683‑M2/2‑35 (MQ=255) aCTGGGGCATCTGCGAAGTTAACCTGATGCCAGGc > 1:5373693‑M2/2‑35 (MQ=255) cTGGGGCATCTGCGAAGTTAACCTGATGCCAGGCa < 1:10055035/35‑1 (MQ=255) cTGGGGCATCTGCGAAGTTAACCTGATGCCAGGCa > 1:10151040/1‑35 (MQ=255) cTGGGGCATCTGCGAAGTTAACCTGATGCCAGGCa < 1:6540555/35‑1 (MQ=255) cTGGGGCATCTGCGAAGTTAACCTGATGCCAGGCa < 1:17387380/35‑1 (MQ=255) cTGGGGCATCTGCGAAGTTAACCTGATGCCAGGCa > 1:2825006/1‑35 (MQ=255) | ATACCCATCATCTGCTGGAAAGCACCGACAGCGACTGGGGCATCTGCGAAGTTAACCTGATGCCAGGCA > REL606/4533936‑4534004 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |