New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 180751 =70 (0.680)8 (0.080) 5/46 NT 13.4% coding (554/801 nt) yadT vitamin B12‑transporter protein BtuF
?REL606 3966540 = 36 (0.370)intergenic (‑56/‑97) ECB_03694/ECB_03695 conserved hypothetical protein/Magnesium and cobalt transport protein corA

TCGATTCAAAACCAGGTACTCGAAGTTTGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/180785‑180751
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGTAAAAAAATTTTAAA  >  REL606/3966540‑3966556
                                                    
TCGATTCAAAACCAGGTACTCGAAGTTTGTGGCGG                   >  1:10146962/1‑35
TCGATTCAAAACCAGGTACTCGAAGTTTGTGGCGG                   <  1:4350237/35‑1
TCGATTCAAAACCAGGTACTCGAAGTTTGTGGCGG                   >  1:19729211/1‑35
TCGATTCAAAACCAGGTACTCGAAGTTTGTGGCGG                   >  1:1763758/1‑35
TCGATTCAAAACCAGGTACTCGAAGTTTGTGGCGG                   <  1:14701398/35‑1
 ctATTCAAAACCAGGTACTCGAAGTTTGTGGCGGG                  >  1:625100/3‑35
 CGATTCAAAACCAGGTACTCGAAGTTTGTGGCGGG                  >  1:8127048/1‑35
 CGATTCAAAACCAGGTACTCGAAGTTTGTGGCGGG                  >  1:1610962/1‑35
 CGATTCAAAACCAGGTACTCGAAGTTTGTGGCGGG                  >  1:14235025/1‑35
 CGATTCAAAACCAGGTACTCGAAGTTTGTGGCGGG                  >  1:10042545/1‑35
 CGATTCAAAACCAGGTACTCGAAGTTTGTGGCGGG                  >  1:12801506/1‑35
 CGATTCAAAACCAGGTACTCGAAGTTTGTGGCGGG                  >  1:12748157/1‑35
  GATTCAAAACCAGGTACTCGAAGTTTGTGGCGGGG                 >  1:935268/1‑35
  GATTCAAAACCAGGTACTCGAAGTTTGTGGCGGGG                 >  1:15895298/1‑35
  GATTCAAAACCAGGTACTCGAAGTTTGTGGCGGGG                 >  1:7753169/1‑35
   ATTCAAAACCATGTACTCGAAGTTTGTGGCGGGGg                >  1:14300648/1‑34
    TTCAAAACCAGGTACTCGAAGTTTGTGGCGGGGga               >  1:4015929/1‑33
     TCAAAACCAGGTACTCGAAGTTTGTGGCGGGGAAA              >  1:15257790/1‑35
     TCAAAACCAGGTACTCGAAGTTTGTGGCGGGGAAA              >  1:5556191/1‑35
     TCAAAACCAGGTACTCGAAGTTTGTGGCGGGGAAA              >  1:12288653/1‑35
      CAAAACCAGGTACTCGAAGTTTGTGGCGGGGGAAA             >  1:15545006/1‑35
      CAAAACCAGGTACTCGAAGTTTGTGGCGGGGGAAA             >  1:13617395/1‑35
       AAAACCAGGTACTCGAAGTTTGTGGCGGGGGAAAA            >  1:13554901/1‑35
         AACCAGGTACTCGAAGTTTGTGGCGGGGGAAAAAA          >  1:3230551/1‑35
         AACCAGGTACTCGAAGTTTGTGGCGGGGGAAAAAA          >  1:17666541/1‑35
          ACCAGGTACTCGAAGTTTGTGGCGGGGGAAAAAAc         >  1:13777568/1‑34
                TACTCGAAGTTTGTGGCGGGGGAAAAAAATTTTAA   >  1:8470961/1‑35
                 ACTCGAAGTTTGTGGCGGGGGAAAAAAATTTTAAA  >  1:9701890/1‑35
                                                    
TCGATTCAAAACCAGGTACTCGAAGTTTGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/180785‑180751
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGTAAAAAAATTTTAAA  >  REL606/3966540‑3966556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.