New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 114196 =59 (0.570)12 (0.130) 3/42 NT 17.6% coding (349/390 nt) mutT nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP
?REL606 422596 = 61 (0.680)intergenic (‑283/+179) cyoA/ampG cytochrome o ubiquinol oxidase subunit II/muropeptide transporter

GACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG‑‑‑‑‑‑‑‑‑‑‑  <  REL606/114232‑114196
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggGGGGGAAAATA  >  REL606/422596‑422606
                                                
GACGTTTAAGCTTCGCAATTACCGGTTCATTGGCT               >  1:6571459/1‑35
GACGTTTAAGCTTCGCAATTACCGGTTCATTGGCT               >  1:19571440/1‑35
GACGTTTAAGCTTCGCAATTACCGGTTCATTGGCT               <  1:1445705/35‑1
 ACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTG              <  1:10599557/35‑1
 ACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTG              <  1:1220334/35‑1
 ACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTG              >  1:5512003/1‑35
 ACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTG              >  1:14134698/1‑35
 ACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTG              <  1:14529189/35‑1
  CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG             >  1:1724160/1‑35
  CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG             >  1:15977350/1‑35
  CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG             >  1:17349502/1‑35
  CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG             >  1:18438507/1‑35
  CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG             >  1:2796240/1‑35
  CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG             >  1:317525/1‑35
  CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG             <  1:4537648/35‑1
  CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG             >  1:11708884/1‑35
  CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG             >  1:10282235/1‑35
  CGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG             <  1:9337660/35‑1
  CGTTTAAGCGTCGCAATTACCGGTTCATTGGCTGG             <  1:1468958/35‑1
   GTTTAAGCTTCGCAATTACCTGTTCATTGGCTGGG            >  1:6066771/1‑35
   GTTTAAGCTTCGCAATTACCGGTTCATTGGCTGGG            >  1:17251706/1‑35
   GTTTAAGCTTCGCAATTACCGGTTCATTGGCTGGG            >  1:10067695/1‑35
    TTTAAGCTTCGCAATTACCGGTTCATTGGCTGGGG           >  1:15353846/1‑35
     TTAAGCTTCGCAATTACCGGTTCATTGGCTGGGGG          >  1:18020683/1‑35
     TTAAGCTTCGCAATTACCGGTTCATTGGCTGGGGG          >  1:2000004/1‑35
     TTAAGCTTCGCAATTACCGGTTCATTGGCTGGGGG          >  1:14507673/1‑35
     TTAAGCTTCGCAATTACCGGTTCATTGGCTGGGGG          >  1:10255445/1‑35
      TAAGCTTCGCAATTACCGGTTCATTGGCTGGGGGG         >  1:13163441/1‑35
       AAGCTTCGCAATTACCGGTTCATTGGCTGGGGGGG        >  1:1462721/1‑35
        AGCTTCGCAATTACCGGTTCATTGGCTGGGGGGGg       >  1:17874671/1‑34
        AGCTTCGCAATTACCGGTTCATTGGCTGGGGGGGA       >  1:17475719/1‑35
        AGCTTCGCAATTACCGGTTCATTGGCTGGGGGGGA       >  1:14761675/1‑35
        AGCTTCGCAATTACCGGTTCATTGGCTGGGGGGGA       >  1:4318077/1‑35
         GCTTCGCAATTACCGGTTCATTGGCTGGGGGGGga      >  1:474097/1‑33
          CTTCGCAATTACCGGTTCATTGGCTGGGGGGGAAA     >  1:7647681/1‑35
           TTCGCAATTACCGGTTCATTGGCTGGGGGGGGAAc    >  1:7650518/1‑34
           TTCGCAATTACCGGTTCATTGGCTGGGGGGGGAAc    >  1:4290039/1‑34
           TTCGCAATTACCGGTTCATTGGCTGGGGGGGAAAA    >  1:15502604/1‑35
            TCGCAATTACCGGTTCATTGGCTGGGGGGGGAAAa   >  1:789941/1‑34
            TCGCAATTACCGGTTCATTGGCTGGGGGGGAAAca   >  1:14890267/1‑33
             CGCAATTACCGGTTCATTGGCTGGGGGGGAAAcaa  >  1:13940800/1‑32
             CGCAATTACCGGTTCATTGGCTGGGGGGGAAAAaa  >  1:14204363/1‑33
             CGCAATTACCGGTTCATTGGCTGGGGGGGAAAAaa  >  1:19085543/1‑33
                                                
GACGTTTAAGCTTCGCAATTACCGGTTCATTGGCTGG‑‑‑‑‑‑‑‑‑‑‑  <  REL606/114232‑114196
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggGGGGGAAAATA  >  REL606/422596‑422606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.