New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1306329 = | 80 (0.780) | 14 (0.190) | 4/34 | NT | 22.1% | intergenic (‑90/+281) | cls/kch | cardiolipin synthetase/voltage‑gated potassium channel |
? | REL606 | = 3839377 | 42 (0.580) | coding (1104/2415 nt) | gyrB | DNA gyrase subunit B |
TACCCCCGCCCCCGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1306346‑1306329 ‑‑‑‑‑‑‑‑‑‑‑ccgacgcGAAAATCGTGGTTGGCAAAATTATCGATGCTGCC < REL606/3839377‑3839344 cACCCCCCCCCCCGACGCGAAAATCGTGGTTGGCA < 1:3049611/34‑1 cCCCCCCCCCCCGACGCGAAAATCGTGGTTGGCAA < 1:3252108/34‑1 ACCCCCCCCCCCGACGCGAAAATCGTGGTTGGCAA < 1:6814266/35‑1 aCCCCCCCCCCGACGCGAAAATCGTGGTTGGCAAA < 1:19099097/34‑1 CCCCCCCCCCCGACGCGAAAATCGTGGTTGGCAAA < 1:7278522/35‑1 CCCCCCCCCCCGACGCGAAAATCGTGGTTGGCAAA < 1:2107096/35‑1 CCCCCCCCCCCGACGCGAAAATCGTGGTTGGCAAA < 1:4094026/35‑1 aCCCCCCCCCGACGCGAAAATCGTGGTTGGCAAAA < 1:2148225/34‑1 CCCCCCCCCCGACGCGAAAATCGTGGTTGGCAAAA < 1:11338889/35‑1 CCCCCCCCCCGACGCGAAAATCGTGGTTGGCAAAA < 1:14713936/35‑1 CCCCCCCCCCGACGCGAAAATCGTGGTTGGCAAAA < 1:6363326/35‑1 CCCCCCCCCCGACGCGAAAATCGTGGTTGGCAAAA < 1:19819937/35‑1 CCCCCCCCCGACGCGAAAATCGTGGTTGGCAAAAT < 1:10434952/35‑1 CCCCCCCCCGACGCGAAAATCGTGGTTGGCAAAAT < 1:4952202/35‑1 cccCCCCCGACGCGAAAATCGTGGTTGGCAAAATT < 1:18781573/32‑1 cccCCCCCGACGCGAAAATCGTGGTTGGCAAAATT < 1:16394992/32‑1 ccCCCCCGACGCGAAAATCGTGGTTGGCAAAATTA < 1:6346790/33‑1 ccCCCCCGACGCGAAAATCGTGGTTGGCAAAATTA < 1:10995621/33‑1 ccCCCCCGACGCGAAAATCGTGGTTGGCAAAATTA < 1:11634549/33‑1 ccCCCCCGACGCGAAAATCGTGGTTGGCAAAATTA < 1:16692973/33‑1 cCCCCCGACGCGAAAATCGTGGTTGGCAAAATTAT < 1:8568513/34‑1 cCCCCCGACGCGAAAATCGTGGTTGGCAAAATTAT < 1:260117/34‑1 cCCCCCGACGCGAAAATCGTGGTTGGCAAAATTAT < 1:16377498/34‑1 cCCCCCGACGCGAAAATCGTGGTTGGCAAAATTAT < 1:18671535/34‑1 cCCCCCGACGCGAAAATCGTGGTTGGCAAAATTAT < 1:6401436/34‑1 CCCCCGACGCGAAAATCGTGGTTGGCAAAATTATC < 1:18967234/35‑1 CCCCCGACGCGAAAATCGTGGTTGGCAAAATTATC < 1:9983700/35‑1 CCCCCGACGCGAAAATCGTGGTTGGCAAAATTATC < 1:11945611/35‑1 CCCCCGACGCGAAAATCGTGGTTGGCAAAATTATC < 1:9460870/35‑1 CCCCGACGCGAAAATCGTGGTTGGCAAAATTATCG < 1:5132009/35‑1 CCCCGACGCGAAAATCGTGGTTGGCAAAATTATCG < 1:12332230/35‑1 ccaGACGCGAAAATCGTGGTTGGCAAAATTATCGA < 1:11600657/32‑1 CCCGACGCGAAAATCGTGGTTGGCAAAATTATCGA < 1:14462357/35‑1 CCCGACGCGAAAATCGTGGTTGGCAAAATTATCGA < 1:2810071/35‑1 CCCGACGCGAAAATCGTGGTTGGCAAAATTATCGA < 1:13267415/35‑1 CCGACGCGAAAATCGTGGTTGGCAAAATTATCGAT > 1:18240348/1‑35 CCGACGCGAAAATCGTGGTTGGCAAAATTATCGAT < 1:9699923/35‑1 CCGACGCGAAAATCGTGGTTGGCAAAATTATCGAT > 1:18732603/1‑35 CCGACGCGAAAATCGTGGTTGGCAAAATTATCGAT < 1:14952106/35‑1 CCGACGCGAAAATCGTGGTTGGCAAAATTATCGAT > 1:2647862/1‑35 CGACGCGAAAATCGTGGTTGGCAAAATTATCGATG < 1:10670310/35‑1 CGACGCGAAAATCGTGGTTGGCAAAATTATCGATG < 1:3944600/35‑1 CGACGCGAAAATCGTGGTTGGCAAAATTATCGATG > 1:4111994/1‑35 CGACGCGAAAATCGTGGTTGGCAAAATTATCGATG < 1:16530087/35‑1 CGACGCGAAAATCGTGGTTGGCAAAATTATCGATG > 1:16605384/1‑35 GACGCGAAAATCGTGGTTGGCCAAATTATCGATGC > 1:5200717/1‑35 GACGCGAAAATCGTGGTTGGCAAAATTATCGATGg > 1:17234328/1‑34 GACGCGAAAATCGTGGTTGGCAAAATTATCGATGC > 1:19591810/1‑35 GACGCGAAAATCGTGGTTGGCAAAATTATCGATGC > 1:7037561/1‑35 ACGCGAAAATCGTGGTTGGCAAAATTATCGATGCT < 1:9100762/35‑1 ACGCGAAAATCGTGGTTGGCAAAATTATCGATGCT < 1:2551552/35‑1 ACGCGAAAATCGTGGTTGGCAAAATTATCGATGCT < 1:2134764/35‑1 ACGCGAAAATCGTGGTTGGCAAAATTATCGATGCT < 1:13367382/35‑1 ACGCGAAAATCGTGGTTGGCAAAATTATCGATGCT < 1:16462238/35‑1 ACGCGAAAATCGTGGTTCGCAAAATTATCGATGCT > 1:19927966/1‑35 ACGCGAAAATAGTGGTTGGCAAAATTATCGATGCT < 1:1044839/35‑1 CGCGAAAATCGTGGTTGGCAAAATTATCGATGCTG > 1:10159023/1‑35 CGCGAAAATCGTGGTTGGCAAAATTATCGATGCTG > 1:9343872/1‑35 CGCGAAAATCGTGGTTGGCAAAATTATCGATGCTG < 1:6519010/35‑1 CGCGAAAATCGTGGTTGGCAAAATTATCCATGCTG > 1:6330722/1‑35 GCGAAAATCGTGGTTGGCAAAATTATCGATGGTGC > 1:19572273/1‑35 GCGAAAATCGTGGTTGGCAAAATTATCGATGCTGC < 1:11478283/35‑1 GCGAAAATCGTGGTTGGCAAAATTATCGATGCTGC > 1:9115333/1‑35 GCGAAAATCGTGGTTGGCAAAATTATCGATGCTGC > 1:11943049/1‑35 GCGAAAATCGTGGTTGGCAAAATTATCGATGCTGC < 1:12470546/35‑1 GCGAAAATCGTGGTTGGCAAAATTATCGATGCTGC < 1:6143029/35‑1 GCGAAAATCGTGGTTGGCAAAATTATCGATGCTGC < 1:5616079/35‑1 GCGAAAATCGTGGTTGGCAAAATTATCGATGCTGC > 1:20046787/1‑35 GCGAAAATCGTGGTTGGCAAAATTATCGATGCTGC < 1:20056396/35‑1 GCGAAAATCGTGGTTGGCAAAATTATCGATGCTGC < 1:3213306/35‑1 CGAAAATCGTGGTTGGCAAAATTATCGATGCTGCa > 1:16261348/1‑34 CGAAAATCGTGGTTGGCAAAATTATCGATGCTGCC < 1:13500888/35‑1 CGAAAATCGTGGTTGGCAAAATTATCGATGCTGCC > 1:127104/1‑35 CGAAAATCGTGGTTGGCAAAATTATCGATGCTGCC > 1:7943895/1‑35 CGAAAATCGTGGTTGGCAAAATTATCGATGCTGCC > 1:662487/1‑35 CGAAAATCGTGGTTGGCAAAATTATCGATGCTGCC < 1:16852067/35‑1 TACCCCCGCCCCCGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1306346‑1306329 ‑‑‑‑‑‑‑‑‑‑‑ccgacgcGAAAATCGTGGTTGGCAAAATTATCGATGCTGCC < REL606/3839377‑3839344 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |