New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2671676 = | 67 (0.650) | 9 (0.120) | 3/36 | NT | 13.7% | coding (328/594 nt) | grpE | heat shock protein |
? | REL606 | 4487631 = | 63 (0.820) | coding (453/1119 nt) | yjhC | predicted oxidoreductase |
Only 100 of 145 total aligned reads displayed.
AAATATTATCATGTCATACTAAGAGAAATGGCTGGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAGA > REL606/4487597‑4487665 | attgatagcctggatcgtgcgctggaaggggctgg > 1:10651731‑M2/35‑35 (MQ=255) aaaTATTATCATGTCATACTAAGAGAAATGGCTgg > 1:16460956/1‑35 (MQ=255) aaaTATTATCATGTCATACTAAGAGAAATGGCTgg < 1:19738883/35‑1 (MQ=255) ttgatagcctggatcgtgcgctggaaggggctggg > 1:6040154‑M2/34‑35 (MQ=255) aaTATTATCATGTCATACTAAGAGAAATGGCTggg < 1:18817486/35‑1 (MQ=255) atatTATCATGTCATACTAAGAGAAATGGCTgggg > 1:5755367/1‑34 (MQ=255) atatTATCATGTCATACTAAGAGAAATGGCTgggg > 1:13260823/1‑34 (MQ=255) tattatCATGTCATACTAAGAGAAATGGCTGGGaa < 1:17983204/35‑1 (MQ=255) gatagcctggatcgtgcgctggaagtggctgggga > 1:17651722‑M2/32‑33 (MQ=255) attatCATGTCATACTAAGAGAAATGGCTGGGgaa > 1:16789552/1‑35 (MQ=255) attatCATGTCATACTAAGAGAAATGGCTGGGgaa > 1:10068085/1‑35 (MQ=255) attatCATGTCATACTAAGAGAAATGGCTGGGgaa > 1:12282588/1‑35 (MQ=255) attatCATGTCATACTAAGAGAAATGGCTGGGaaa < 1:6794612/35‑1 (MQ=255) ttatCATGTCATACTAAGAGAAATGGCTGGGgaaa > 1:9090310/1‑35 (MQ=255) ttatCATGTCATACTAAGAGAAATGGCTGGGaaaa < 1:19421469/35‑1 (MQ=255) tagcctggatcgtgcgctggaagtggctgGGaaaa > 1:291729‑M2/30‑35 (MQ=255) tatCATGTCATACTAAGAGAAATGGCTGGGGaaac > 1:12757992/1‑35 (MQ=255) tatCATGTCACACTAAGAGAAATGGCTGGGAaaac < 1:9444381/35‑1 (MQ=255) agcctggatcgtgcgctggaagtggctgggaaaga > 1:6032038‑M2/29‑33 (MQ=255) agcctggatcgtgcgctggaagtggctgGggaaaa > 1:3222987‑M2/29‑34 (MQ=255) agcctggatcgtgcgctggaagtggctgGggaaaa > 1:402973‑M2/29‑34 (MQ=255) agcctggatcgtgcgctggaagtggctgGGAaaac > 1:4655392‑M2/29‑35 (MQ=255) gcctggatcgtgcgctggaagtggctgggaaaagc > 1:4092945‑M2/28‑33 (MQ=255) atCATGTCATACTAAGAGAAATGGCTGGGGaaaca > 1:7519975/1‑35 (MQ=255) atCATGTCATACTAAGAGAAATGGCTGGGAaaaca < 1:1574620/35‑1 (MQ=255) atCATGTCATACTAAGAGAAATGGCTGGGAaaaca < 1:9751056/35‑1 (MQ=255) atCATGTCATACTAAGAGAAATGGCTGGGAaaaca < 1:19786778/35‑1 (MQ=255) atCATGTCATACTAAGAGAAATGGCTGGGAaaaca < 1:12260068/35‑1 (MQ=255) tCATGTCATACTAAGAGAAATGGCTGGGAaaacaa < 1:7990462/35‑1 (MQ=255) tCATGTCATACTAAGAGAAATGGCTGGGAaaacaa < 1:7660469/35‑1 (MQ=255) tCATGTCATACTAAGAGAAATGGCTGGGAaaacaa > 1:360579/1‑35 (MQ=255) tCATGTCATACTAAGAGAAATGGCTGGGAaaacaa < 1:980889/35‑1 (MQ=255) cctggatcgtgcgctggaagtggctgggaaaaatc > 1:5657704‑M2/27‑32 (MQ=255) cctggatcgtgcgctggaagtggctgGGAaaagaa > 1:3129425‑M2/27‑35 (MQ=255) cATGTCATACTAAGAGAAATGGCTGGGGaaacaaa > 1:133751/1‑35 (MQ=255) cATGTCATACTAAGAGAAATGGCTGGGGaaacaaa > 1:16141398/1‑35 (MQ=255) cATGTCATACTAAGAGAAATGGCTGGGGaaacaaa > 1:13972443/1‑35 (MQ=255) cATGTCATACTAAGAGAAATGGCTGGGAaaacaaa < 1:16778643/35‑1 (MQ=255) cATGTCATACTAAGAGAAATGGCTGGGAaaacaaa < 1:15331458/35‑1 (MQ=255) aTGTCATACTAAGAGAAATGGCTGGGAaaacaaac < 1:12846910/35‑1 (MQ=255) aTGTCATACTAAGAGAAATGGCTGGGAaaacaaac > 1:20336655/1‑35 (MQ=255) tGTCATACTAAGAGAAATGGCTGGGGAaacaaaca > 1:2063377/1‑35 (MQ=255) tGTCATACTAAGAGAAATGGCTGGGAAaacaaaca > 1:10101522/1‑35 (MQ=255) ggatcgtgcgctggaagtggctgGgaaaacaaaac > 1:4401152‑M2/24‑33 (MQ=255) gTCATACTAAGAGAAATGGCTGGGAAAacaaacaa < 1:7630278/35‑1 (MQ=255) gTCATACTAAGAGAAATGGCTGGGAAAacaaacaa < 1:1073165/35‑1 (MQ=255) gTCATACTAAGAGAAATGGCTGGGAAAacaaacaa < 1:11379903/35‑1 (MQ=255) gTCATACTAAGAGAAATGGCTGGGAAAacaaacaa < 1:13742385/35‑1 (MQ=255) tCATACTAAGAGAAATGGCTGGGAAAACAAACAag < 1:8735069/35‑1 (MQ=255) tCATACTAAGAGAAATGGCTGGGAAAACAAACAag < 1:8056500/35‑1 (MQ=255) cATACTAAGAGAAATGGCTGGGGAAaaanacnann > 1:3468054/1‑33 (MQ=21) cATACTAAGAGAAATGGCTGGGAAAACAAACAaga < 1:9593599/35‑1 (MQ=255) cATACTAAGAGAAATGGCTGGGAAAACAAACAaga > 1:19056234/1‑35 (MQ=255) cATACTAAGAGAAATGGCTGGGAAAACAAACAaga < 1:19092992/35‑1 (MQ=255) aTACTAAGAGAAATGGCTGGGGAAACAAACAagag > 1:6939494/1‑35 (MQ=255) aTACTAAGAGAAATGGCTGGGAAAACAAGCAagag < 1:4164142/35‑1 (MQ=255) aTACTAAGAGAAATGGCTGGGAAAACAAACAagag < 1:3783251/35‑1 (MQ=255) cTAAGAGAAATGGCTGGGAAAACAAACAAgagaga < 1:4426428/35‑1 (MQ=255) tAAGAGAAATGGCTGGGAAAACAAACAAGAGAGAc < 1:16591510/35‑1 (MQ=255) tAAGAGAAATGGCTGGGAAAACAAACAAGAGAGAc < 1:134961/35‑1 (MQ=255) aaGAGAAATGGCTGGGAAAACAAACAAGAGAGACt > 1:9383808/1‑35 (MQ=255) aaGAGAAATGGCTGGGAAAACAAACAAGAGAGACt < 1:14250150/35‑1 (MQ=255) atagaAATGGCTGGGAAAACAAACAAGAGAGACtt > 1:16383412/3‑35 (MQ=255) agagAAATGGCTGGGGAAACAAACAAGAGAGACtt > 1:18046884/1‑35 (MQ=255) agagAAATGGCTGGGAAAACAAACAAGAGAGACtt < 1:4384699/35‑1 (MQ=255) gagaAATGGCTGGGGAAACAAACAAGAGAGACttt > 1:287310/1‑35 (MQ=255) gagaAATGGCTGGGAAAACAAACAAGAGAGACttt < 1:12742805/35‑1 (MQ=255) gagaAATGGCTGGGAAAACAAACAAGAGAGACttt < 1:728422/35‑1 (MQ=255) agaAATGGCTGGGAAAACAAACAAGAGAGACTTTc < 1:10040754/35‑1 (MQ=255) gaAATGGCTGGGAAAACAAACAAGAGAGACTTTcc < 1:1750925/35‑1 (MQ=255) gaAATGGCTGGGAAAACAAACAAGAGAGACTTTcc < 1:8686177/35‑1 (MQ=255) aaaTGGCTGGGAAAACAAACAAGAGAGACTTTccc > 1:11588443/1‑34 (MQ=255) aaaTGGCTGGGAAAACAAACAAGAGAGACTTTCCt < 1:5595851/35‑1 (MQ=255) aaaTGGCTGGGAAAACAAACAAGAGAGACTTTCCt > 1:13784211/1‑35 (MQ=255) aaaTGGCTGGGAAAACAAACAAGAGAGACTTTCCt > 1:15885697/1‑35 (MQ=255) aaTGGCTGGGAAAACAAACAAGAGAGACTTTCCTg < 1:7128912/35‑1 (MQ=255) aTGGCTGGGAAAACAAACAAGAGAGACTTTCCTgg < 1:19039331/35‑1 (MQ=255) tggctgGGAAAACAAACAAGAGAGACTTTCCTGGa < 1:25306‑M2/29‑1 (MQ=255) tggctgGGAAAACAAACAAGAGAGACTTTCCTGGa < 1:11680106‑M2/29‑1 (MQ=255) tggctgGGAAAACAAACAAGAGAGACTTTCCTGGa > 1:6843980‑M2/7‑35 (MQ=255) tggctgGGAAAACAAACAAGAGAGACTTTCCTGGa < 1:815512‑M2/29‑1 (MQ=255) ggctgGGAAAACAAACAAGAGAGATTTTCCTGGaa > 1:14132382‑M2/6‑35 (MQ=255) ggctgGGAAAACAAACAAGAGAGACTTTCCTGGaa > 1:12096305‑M2/6‑35 (MQ=255) ggctgGGAAAACAAACAAGAGAGACTTTCCTGGaa > 1:8432220‑M2/6‑35 (MQ=255) ggctgGGAAAACAAACAAGAGAGACTTTCCTGGaa < 1:20089557‑M2/30‑1 (MQ=255) ggctgGGAAAACAAACAAGAGAGAATTTCCTGGaa < 1:16247391‑M2/30‑1 (MQ=255) gctgGGAAAACAAACAAGAGAGACTTTCCTGGaaa > 1:2486165‑M2/5‑35 (MQ=255) gctgGGAAAACAAACAAGAGAGACTTTCCTGGaaa > 1:380091‑M2/5‑35 (MQ=255) ctgGGAAAACAAACAAGAGAGACTTTCCTGGaaaa < 1:817492‑M2/32‑1 (MQ=255) ctgGGAAAACAAACAAGAGAGACTTTCCTGGaaaa > 1:2542724‑M2/4‑35 (MQ=255) tgGGAAAACAAACAAGAGAGACTTTCCTGGaaaaa > 1:18644183‑M2/3‑35 (MQ=255) tgGGAAAACAAACAAGAGAGACTTTCCTGGaaaaa > 1:6813643‑M2/3‑35 (MQ=255) tgGGAAAACAAACAAGAGAGACTTTCCTGGaaaaa < 1:9017312‑M2/33‑1 (MQ=255) tgGGAAAACAAACAAGAGAGACTTTCCTGGaaaaa < 1:12354146‑M2/33‑1 (MQ=255) gGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAg > 1:5482224‑M2/2‑35 (MQ=255) gGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAg < 1:9630076‑M2/34‑1 (MQ=255) ggAAAACAAACAATAGAGACTTTCCTGGAAAAAGa > 1:5255666/1‑35 (MQ=255) ggAAAACAAACAAGAGAGACTTTCCTGGAAAAAGa > 1:1538936/1‑35 (MQ=255) ggAAAACAAACAAGAGAGACTTTCCTGGAAAAAGa < 1:547892/35‑1 (MQ=255) ggAAAACAAACAAGAGAGACTTTCCTGGAAAAAGa > 1:5295756/1‑35 (MQ=255) | AAATATTATCATGTCATACTAAGAGAAATGGCTGGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAGA > REL606/4487597‑4487665 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |