New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3780471 = | 81 (0.790) | 7 (0.120) | 4/28 | NT | 14.0% | coding (503/1359 nt) | ECB_03520 | conserved hypothetical protein |
? | REL606 | = 4600662 | 39 (0.650) | coding (33/606 nt) | osmY | periplasmic protein |
Only 100 of 165 total aligned reads displayed.
CGATGACTATGACAAGACTGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGCCGTCGCGA > REL606/4600628‑4600696 | cGATGACTATGACAAGACTGAAGATTTCGAAAAct > 1:19309008/1‑35 (MQ=255) cGATGACTATGACAAGACTGAAGATTTCGAAAAct > 1:13798300/1‑35 (MQ=255) gATGACTATGACAAGACTGAAGATTTCGAAAACTc < 1:19455258‑M2/35‑2 (MQ=255) gATGACTATGACAAGACTGAAGATTTCGAAAACTc < 1:20190893‑M2/35‑2 (MQ=255) aTGACTATGACAAGACTGAAGATTTCGAAAACTct < 1:17289871‑M2/35‑3 (MQ=255) aTGACTATGACAAGACTGAAGATTTCGAAAACTct > 1:18022211‑M2/1‑33 (MQ=255) aTGACTATGACAAGACTGAAGATTTCGAAAACTct > 1:606854‑M2/1‑33 (MQ=255) aTGACTATGACAAGACTGAAGATTTCGAAAACTct < 1:7969452‑M2/35‑3 (MQ=255) tGACTATGACAAGACTGAAGATTTCGAAAACTctg > 1:6655843‑M2/1‑32 (MQ=255) tGACTATGACAAGACTGAAGATTTCGAAAACTctg > 1:16271770‑M2/1‑32 (MQ=255) tGACTATGACAAGACTGAAGATTTCGAAAACTctg > 1:18253853‑M2/1‑32 (MQ=255) tGACTATGACAAGACTGAAGATTTCGAAAACTctg > 1:1273861‑M2/1‑32 (MQ=255) tGACTATGACAAGACTGAAGATTTCGAAAACTctg > 1:11232203‑M2/1‑32 (MQ=255) aCTATGACAAGACTGAAGATTTCGAAAACTctgct < 1:17673328‑M2/35‑6 (MQ=255) aCTATGACAAGACTGAAGATTTCGAAAACTctgct > 1:12482427‑M2/1‑30 (MQ=255) aCTATGACAAGACTGAAGATTTCGAAAACTctgct > 1:511890‑M2/1‑30 (MQ=255) aCTATGACAAGACTGAAGATTTCGAAAACTctgct < 1:15095336‑M2/35‑6 (MQ=255) aCTATGACAAGACTGAAGATTTCGAAAACTctgct < 1:13866748‑M2/35‑6 (MQ=255) cTATGACAAGATTGAAGATTTCGAAAACTctgctg > 1:9426167‑M2/1‑29 (MQ=255) cTATGACAAGACTGAAGATTTCGAAAACTctgctg < 1:8379883‑M2/35‑7 (MQ=255) cTATGACAAGACTGAAGATTTCGAAAACTctgctg > 1:8515940‑M2/1‑29 (MQ=255) cTATGACAAGACTGAAGATTTCGAAAACTctgctg < 1:10498160‑M2/35‑7 (MQ=255) cTATGACAAGACTGAAGATTTCGAAAACTctgctg > 1:19300147‑M2/1‑29 (MQ=255) cTATGACAAGACTGAAGATTTCGAAAACTctgctg > 1:16604637‑M2/1‑29 (MQ=255) tATGACAAGACTTAAGATTTCGAAAACTctgctgg < 1:4135947‑M2/35‑8 (MQ=255) tATGACAAGACTGAAGATTTCGAAAACTctgctgg > 1:17503288‑M2/1‑28 (MQ=255) tATGACAAGACTGAAGATTTCGAAAACTctgctgg > 1:13454011‑M2/1‑28 (MQ=255) tATGACAAGACTGAAGATTTCGAAAACTctgctgg < 1:16851481‑M2/35‑8 (MQ=255) tATGACAAGACTGAAGATTTCGAAAACTctgctgg > 1:20396105‑M2/1‑28 (MQ=255) tATGACAAGACTGAAGATTTCGAAAACTctgctgg < 1:19068818‑M2/35‑8 (MQ=255) tATGACAAGACTGAAGATTTCGAAAACTctgctgg > 1:1832209‑M2/1‑28 (MQ=255) aTTACAAGACTGAAGATTTCGAAAACTctgctggc < 1:3003850‑M2/35‑9 (MQ=255) aTGACAAGACTGAAGATTTCGAAAACTctgctggc < 1:5390168‑M2/35‑9 (MQ=255) aTGACAAGACTGAAGATTTCGAAAACTctgctggc < 1:5693635‑M2/35‑9 (MQ=255) aTGACAAGACTGAAGATTTCGAAAACTctgctggc < 1:2440542‑M2/35‑9 (MQ=255) aTGACAAGACTGAAGATTTCGAAAACTctgctggc < 1:6115850‑M2/35‑9 (MQ=255) tGACAAGACTGAAGATTTCGAAAACTctgctggct > 1:19103222‑M2/1‑26 (MQ=255) tGACAAGACTGAAGATTTCGAAAACTctgctggct < 1:9357111‑M2/35‑10 (MQ=255) tGACAAGACTGAAGATTTCGAAAACTctgctggct < 1:8048150‑M2/35‑10 (MQ=255) tGACAAGACTGAAGATTTCGAAAACTctgctggct > 1:10417800‑M2/1‑26 (MQ=255) tGACAAGACTGAAGATTTCGAAAACTctgctggct < 1:12328112‑M2/35‑10 (MQ=255) tGACAAGACTGAAGATTTCGAAAACTctgctggct > 1:15645152‑M2/1‑26 (MQ=255) gACAGGACTGAAGATTTCGAAAACTctgctggctg > 1:3899591‑M2/1‑25 (MQ=255) gACAAGACTTAAGATTTCGAAAACTctgctggctg < 1:2799548‑M2/35‑11 (MQ=255) gACAAGACTGAAGATTTCGAAAACTctgctggctg > 1:18291154‑M2/1‑25 (MQ=255) gACAAGACTGAAGATTTCGAAAACTctgctggctg < 1:12812419‑M2/35‑11 (MQ=255) gACAAGACTGAAGATTTCGAAAACTctgctggctg < 1:11814685‑M2/35‑11 (MQ=255) gACAAGACTGAAGATTTCGAAAACTctgctggctg > 1:15333603‑M2/1‑25 (MQ=255) aCAATACTGAAGATTTCGAAAACTctgctggctgg < 1:12195037‑M2/35‑12 (MQ=255) aCAAGACTGAAGATTTCGAAAACTctgctggctgg < 1:4027112‑M2/35‑12 (MQ=255) aCAAGACTGAAGATTTCGAAAACTctgctggctgg < 1:6886282‑M2/35‑12 (MQ=255) aCAAGACTGAAGATTTCGAAAACTCTGCTGGCTGt < 1:20384607/35‑1 (MQ=255) aCAAGACTGAAGATTTCGAAAACTCTGCTGGCTGt < 1:5789434/35‑1 (MQ=255) aCAAGACTGAAGATTTCGAAAACTCTGCTGGCTGt < 1:1167776/35‑1 (MQ=255) aCAAGACTGAAGATTTCGAAAACTATGCTGGCTGt < 1:1682113/35‑1 (MQ=255) cAAGACTGAAGATTTCGAAAACTctgctggctggg < 1:16103941‑M2/35‑13 (MQ=255) cAAGACTGAAGATTTCGAAAACTctgctggctggg < 1:1064342‑M2/35‑13 (MQ=255) cAAGACTGAAGATTTCGAAAACTCTGCTGGCTGTa < 1:4894642/35‑1 (MQ=255) aaGACTGAAGATTTCGAAAACTctgctggctgggg < 1:14076015‑M2/35‑14 (MQ=255) aaGACTGAAGATTTCGAAAACTctgctggctgggg < 1:15984954‑M2/35‑14 (MQ=255) aaGACTGAAGATTTCGAAAACTctgctggctggga < 1:13042625‑M2/35‑14 (MQ=255) aaGACTGAAGATTTCGAAAACTCTGCTGGCTGTaa < 1:18675059/35‑1 (MQ=255) aGACTGAAGATTTCGAAAACTctgctggctggggt < 1:20261910‑M2/35‑15 (MQ=255) aGACTGAAGATTTCGAAAACTctgctggctggggg < 1:4682437‑M2/35‑15 (MQ=255) aGACTGAAGATTTCGAAAACTCTGCTGGCTGTAAt < 1:6753967/35‑1 (MQ=255) aGACTGAAGATTTCGAAAACTCTGCTGGCTGTAAt < 1:10949660/35‑1 (MQ=255) aGACTGAAGATTTCGAAAACTCTGCTGGCTGTAAt < 1:17238066/35‑1 (MQ=255) gACTGAAGATTTCGAAAACTctgctggctggggtg < 1:7533890‑M2/35‑16 (MQ=255) gACTGAAGATTTCGAAAACTCTGCTGGCTGTAATg < 1:3480192/35‑1 (MQ=255) aCTGAAGATTTCGAAAACTctgctggctggggggg < 1:17057088‑M2/35‑17 (MQ=255) aCTGAAGATTTCGAAAACTCTGCTGGCTGGGATGt > 1:1443682/1‑35 (MQ=37) cTGAAGATTTCGAAAACTctgctggctgggggggt < 1:13646117‑M2/35‑18 (MQ=255) tGAAGATTTCGAAAACTctgctggctgggggggtg < 1:5795042‑M2/35‑19 (MQ=255) tGAAGATTTCGAAAACTCTGctggctggggggttg < 1:7458817‑M2/35‑16 (MQ=255) tGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTg < 1:1919865/35‑1 (MQ=255) tGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTg < 1:19975264/35‑1 (MQ=255) tGAAGATTTCGAAAACTCTGCTGGCTGGGATGttt > 1:15751625/1‑34 (MQ=37) gAAGATTTCGAAAACTctgctggctgggggggtgt < 1:3101271‑M2/35‑20 (MQ=255) gAAGATTTCGAAAACTCTGctggctggggtgttgt < 1:2733801‑M2/35‑17 (MQ=255) gAAGATTTCGAAAACTCTGctggctggggggttgg < 1:7307249‑M2/35‑17 (MQ=255) gAAGATTTCGAAAACTCTGCTGGCTGTAATGTTGa < 1:12378360/35‑1 (MQ=255) aGATTTCGAAAACTCTGCTGGCTGTAATGTTGAcc < 1:17971988/35‑1 (MQ=255) aGATTTCGAAAACTCTGCTGGCTGTAATGTTGAcc < 1:12101567/35‑1 (MQ=255) aGATTTCGAAAACTCTGCTGGCTGTAATGTTGAcc < 1:2285970/35‑1 (MQ=255) gATTTCGAAAACTCTGCTGGTTGTAATGTTGACct > 1:2470786/1‑35 (MQ=255) gATTTCGAAAACTCTGCTGGCTGTAATGTTGACct < 1:715326/35‑1 (MQ=255) aTTTCGAAAACTCTGCTGGCTGTAATGTTGACctc < 1:842854/35‑1 (MQ=255) aTTTCGAAAACTCTGCTGGCTGGGGTGTTGACctc > 1:2629064/1‑35 (MQ=25) tttCGAAAACTCTGCTGGCTGTAATGTTGACctct < 1:10473981/35‑1 (MQ=255) tttCGAAAACTCTGCTGGCTGTAATGTTGACctct < 1:8729315/35‑1 (MQ=255) tCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGc < 1:4315575/35‑1 (MQ=255) tCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGc < 1:11504782/35‑1 (MQ=255) tCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGc < 1:17828693/35‑1 (MQ=255) cGAAAACTCTGCTGGCTGTAATGTTGACCTCTGcc < 1:15761251/35‑1 (MQ=255) cGAAAACTCTGCTGGCTGTAATGTTGACCTCTGcc < 1:3521614/35‑1 (MQ=255) cGAAAACTCTGCTGGCTGTAATGTTGACCTCTGcc < 1:7887023/35‑1 (MQ=255) gAAAACTCTGCTGGCTGTAATGTTGACCTCTGCCg < 1:14120680/35‑1 (MQ=255) aaaaCTCTGCTGGCTGTAATGTTGACCTCTGCCGt < 1:2850310/35‑1 (MQ=255) aaaCTCTGCTGGCTGTAATGTTGACCTCTGCCGTc < 1:13961630/35‑1 (MQ=255) tctGCTGGCTGTAATGTTGACCTCTGCCGTCGCGa < 1:3736776/35‑1 (MQ=255) | CGATGACTATGACAAGACTGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGCCGTCGCGA > REL606/4600628‑4600696 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |