New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1332666 = | 72 (0.700) | 5 (0.060) | 4/36 | NT | 7.6% | coding (440/975 nt) | cysB | DNA‑binding transcriptional dual regulator, O‑acetyl‑L‑serine‑binding |
? | REL606 | = 4432999 | 68 (0.880) | intergenic (‑97/‑213) | ppa/ytfQ | inorganic pyrophosphatase/predicted sugar transporter subunit: periplasmic‑binding component of ABC superfamily |
Only 100 of 155 total aligned reads displayed.
ATGTCTTCGCTTGTTTTCGTCTTCATTTTCCTTTTTCGCCAATTTTAAGACGGTATACAGAGCAGGAAA > REL606/4432965‑4433033 | aTGTCTTCGCTTGTTTTCGTCTTCATTTTCCtttt > 1:149794/1‑35 (MQ=255) aTGTCTTCGCTTGTTTTCGTCTTCATTTTCCtttt > 1:19546009/1‑35 (MQ=255) aTGTCTTCGCTTGTTTTCGTCTTCATTTTCCtttt < 1:2824778/35‑1 (MQ=255) aTGTCTTCGCTTGTTTTCGTCTTCATTTTCCtttt < 1:2905124/35‑1 (MQ=255) aTGTCTTCGCTTGTTTTCGTCTTCATTTTCCtttt < 1:13067177/35‑1 (MQ=255) aTGTCTTCGCTTGTTTTCGTCTTCATTTTCCtttt > 1:6112245/1‑35 (MQ=255) aTGTCTTCGCTTGTTTTCGTCTTCATTTTCCtttt < 1:16666558/35‑1 (MQ=255) tGTCTTCGCTTGTTTTCGTCTTCATTTTCCTTTTt > 1:9487985‑M2/1‑34 (MQ=255) tGTCTTCGCTTGTTTTCGTCTTCATTTTCCTTTTt < 1:8652328‑M2/35‑2 (MQ=255) tGTCTTCGCTTGTTTTCGTCTTCATTTTCCTTTTt > 1:5011474‑M2/1‑34 (MQ=255) gTCTTCGCTTGTTTTCGTCTTCATTTTCCTTTTtc < 1:8045780‑M2/35‑3 (MQ=255) gTCTTCGCTTGTTTTCGTCTTCATTTTCCTTTTtc > 1:2894191‑M2/1‑33 (MQ=255) gTCTTCGCTTGTTTTCGTCTTCATTTTCATTTTtc > 1:12422934‑M2/1‑33 (MQ=255) tCTTCGCTTGTTTTCGTCTTCATTTTCCTTTTtcg > 1:3561084‑M2/1‑32 (MQ=255) tCTTAGCTTGTTTTCGTCTTCATTTTCCTTTTtcg > 1:17638866‑M2/1‑32 (MQ=255) cTTCGCTTGTTTTCGTCTTCATTTTCCTTTTtcgc > 1:16395471‑M2/1‑31 (MQ=255) cTTCGCTTGTTTTCGTCTTCATTTTCCTTTTtcgc > 1:19952737‑M2/1‑31 (MQ=255) cTTCGCTTGTTTTCGTCTTCATTTTCCTTTTtcgc > 1:2201208‑M2/1‑31 (MQ=255) ttCGCTTGTTTTCGTCTTCATTTTCCTTTTtcgcc > 1:14906554‑M2/1‑30 (MQ=255) ttCGCTTGTTTTCGTCTTCATTTTCCTTTTtcgcc > 1:10245122‑M2/1‑30 (MQ=255) ttCGCTTGTTTTCGTCTTCATTTTCCTTTTtcgcc < 1:6264497‑M2/35‑6 (MQ=255) ttCGCTTGTTTTCGTCTTCATTTTCCTTTTtcgcc > 1:16246215‑M2/1‑30 (MQ=255) ttCGCTTGTTTTCGTCTTCATTTTCCTTTTtcgcc < 1:6268450‑M2/35‑6 (MQ=255) tCGCTTGTTTTCGTCTTCATTTTCCTTTTtcgcca > 1:1967099‑M2/1‑29 (MQ=255) tCGCTTGTTTTCGTCTTCATTTTCCTTTTtcgcca > 1:3776144‑M2/1‑29 (MQ=255) tCGCTTGTTTTCGTCTTCATTTTCCTTTTtcgcca < 1:6850604‑M2/35‑7 (MQ=255) cGCTTGTTTTCGTCTTCATTTTCCTTTTTCGCCaa > 1:18656609/1‑35 (MQ=255) gCTTGTTTTCGTCTTCATTTTCCTTTTTCGCCAAt > 1:1578865/1‑35 (MQ=255) cTTGTTTTCGTCTTCATTTTCCTTTTTCGCCAAtt < 1:5340038/35‑1 (MQ=255) cTTGTTTTCGTCTTCATTTTCCTTTTTCGCCAAtt > 1:702704/1‑35 (MQ=255) ttGTTTTCGTCTTCATTTTCCTTTTTCGCCAAttt > 1:12885177/1‑35 (MQ=255) ttGTTTTCGTCTTCATTTTCCTTTTTCGCCAAttt > 1:4436889/1‑35 (MQ=255) ttGTTTTCGTCTTCATTTTCCTTTTTCGCCAAttt < 1:6892993/35‑1 (MQ=255) tGTTTTCGTCTTCATTTTCCTTTTTCGCCAAtttt > 1:8702413/1‑35 (MQ=255) tGTTTTCGTCTTCATTTTCCTTTTTCGCCAAtttt < 1:13222513/35‑1 (MQ=255) tGTTTTCGTCTTCATTTTCCTTTTTCGCCAAtttt < 1:19005823/35‑1 (MQ=255) tGTTTTCGTCTTCATTTTCCTTTTTCGCCAAtttt < 1:11620146/35‑1 (MQ=255) gTTTTCGTCTTCATTTTCCTTTTTCGCCAATTTTa < 1:12511616/35‑1 (MQ=255) gTTTTCGTCTTCATTTTCCTTTTTCGCCAATTTTa > 1:2267422/1‑35 (MQ=255) gTTTTCGTCTTCATTTTCCTTTTTCGCCAATTTTa > 1:9684049/1‑35 (MQ=255) gTTTTCGTCTTCATTTTCCTTTTTCGCCAATTTTa < 1:17164902/35‑1 (MQ=255) ttttCGTCTTCATTTTCCTTTTTCGCCAATTTTaa > 1:2829541/1‑35 (MQ=255) ttttCGTCTTCATTTTCCTTTTTCGCCAATTTTaa < 1:1563730/35‑1 (MQ=255) tttCGTCTTCATTTTCCTTTTTCGCCAATTTTAAg > 1:11693945/1‑35 (MQ=255) tttCGTCTTCATTTTCCTTTTTCGCCAATTTTAAg > 1:15219046/1‑35 (MQ=255) tttCGTCTTCATTTTCCTTTTTCGACAATTTTAAg < 1:2554987/35‑1 (MQ=255) ttCGTCTTCATTTTCCTTTTTCGCCAATTTTAAGa > 1:15965782/1‑35 (MQ=255) cGTCTTCATTTTCCTTTTTCGCCAATTTTAAGACg < 1:5352671/35‑1 (MQ=255) cGTCTTCATTTTCCTTTTTCGCCAATTTTAAGACg < 1:18656678/35‑1 (MQ=255) cGTCTTCATTTTCCTTTTTCGCCAATTTTAAGACg > 1:1417170/1‑35 (MQ=255) cGTCTTCATTTTCCTTTTTCGCCAATTTTAAGACg > 1:19467181/1‑35 (MQ=255) gTCTTCATTTTCCTTTTTCGCCAATTTTAAGACgg < 1:2185691/35‑1 (MQ=255) gTCTTCATTTTCCTTTTTCGCCAATTTTAAGACgg > 1:793994/1‑35 (MQ=255) gTCTTCATTTTCCTTTTTCGCCAATTTTAAGACgg < 1:19213841/35‑1 (MQ=255) tCTTCATTTTCCTTTTTCGCCAATTTTAAGACGGt > 1:20564441/1‑35 (MQ=255) tCTTCATTTTCCTTTTTCGCCAATTTTAAGACGGt > 1:2082833/1‑35 (MQ=255) tCTTCATTTTCCTTTTTCGCCAATTTTAAGACGGt < 1:12744416/35‑1 (MQ=255) tCTTCATTTTCCTTTTTCGCCAATTTTAAGACGGt < 1:14388789/35‑1 (MQ=255) cTTCATTTTCCTTTTTCGCCAATTTTAAGACGGta > 1:8707207/1‑35 (MQ=255) cTTCATTTTCCTTTTTCGCCAATTTTAAGACGGta < 1:14139224/35‑1 (MQ=255) cTTCATTTTCCTTTTTCGCCAATTTTAAGACGGta > 1:1271271/1‑35 (MQ=255) ttCATTTTCCTTTTTCGCCAATTTTAAGACGGtat > 1:7490293/1‑35 (MQ=255) ttCATTTTCCTTTTTCGCCAATTTTAAGACGGtat > 1:10145872/1‑35 (MQ=255) ttCATTTTCCTTTTTCGCCAATTTTAAGACGGtat < 1:15144309/35‑1 (MQ=255) ttCATTTTCCTTTTTCGCCAATTTTAAGACGGtat > 1:17287852/1‑35 (MQ=255) tCATTTTCCTTTTTCGCCAATTTTAAGACGGtata > 1:13645015/1‑35 (MQ=255) tCATTTTCCTTTTTCGCCAATTTTAAGACGGtata > 1:6428069/1‑35 (MQ=255) tCATTTTCCTTTTTCGCCAATTTTAAGACGGtata > 1:5134255/1‑35 (MQ=255) cATTTTCCTTTTTCGCCAATTTTAAGACGGTATAc < 1:15410267/35‑1 (MQ=255) cATTTTCCTTTTTCGCCAATTTTAAGACGGTATAc < 1:16816236/35‑1 (MQ=255) cATTTTCCTTTTTCGCCAATTTTAAGACGGTATAc < 1:16847367/35‑1 (MQ=255) aTTTTCCTTTTTCGCCAATTTTAAGACGGTATACa < 1:8904466/35‑1 (MQ=255) aTTTTCCTTTTTCGCCAATTTTAAGACGGTATACa < 1:11217857/35‑1 (MQ=255) aTTTTCCTTTTTCGCCAATTTTAAGACGGTATACa > 1:14289621/1‑35 (MQ=255) aTTTTCCTTTTTCGCCAATTTTAAGACGGTATACa < 1:16526167/35‑1 (MQ=255) aTTTTCCTTTTTCGCCAATTTTAAGACGGTATACa < 1:20411754/35‑1 (MQ=255) aTTTTCCTTTTTCGCCAATTTTAAGACGGTATACa > 1:20192960/1‑35 (MQ=255) ttttCCTTTTTCGCCAATTTTAAGACGGTATACag < 1:9513369/35‑1 (MQ=255) ttttCCTTTTTCGCCAATTTTAAGACGGTATACag < 1:3410754/35‑1 (MQ=255) tttCCTTTTTCGCCAATTTTAAGACGGTATACaga < 1:19142762/35‑1 (MQ=255) ttCCTTTTTCGCCAATTTTAAGACGGTATACagag < 1:6828305/35‑1 (MQ=255) ttCCTTTTTCGCCAATTTTAAGACGGTATACagag < 1:1801647/35‑1 (MQ=255) tCCTTTTTCGCCAATTTTAAGACGGTATACAGAGc > 1:4251023/1‑35 (MQ=255) tCCGTTTtcgccacagaagcgctgcatctgtatga > 1:17768240‑M2/1‑7 (MQ=255) ccTTTTTCGCCAATTTTAAGACGGTATACAGAGCa > 1:916131/1‑35 (MQ=255) ccTTTTTCGCCAATTTTAAGACGGTATACAGAGCa > 1:18942575/1‑35 (MQ=255) ccGTTTtcgccacagaagcgctgcatctgtatgaa > 1:8456915‑M2/1‑6 (MQ=255) cTTTTTCGCCAATTTTAAGACGGTATACAGAGCAg < 1:10962345/35‑1 (MQ=255) cTTTTTCGCCAATTTTAAGACGGTATACAGAGCAg > 1:13401520/1‑35 (MQ=255) tttttCGCCAATTTTAAGACGGTATACAGAGCAgg < 1:16712725/35‑1 (MQ=255) tttttCGCCAATTTTAAGACGGTATACAGAGCAgg < 1:4723595/35‑1 (MQ=255) ttttcgccacagaagcgctgcatctgtatgaagat > 1:14715296‑M2/1‑3 (MQ=255) ttttcgccacagaagcgctgcatctgtatgaagat > 1:6690432‑M2/1‑3 (MQ=255) ttttCGCCAATTTTAAGACGGTATACAGAGCAGGa < 1:15769210/35‑1 (MQ=255) ttttCGCCAATTTTAAGACGGTATACAGAGCAGGa < 1:15907161/35‑1 (MQ=255) tttCGCCAATTTTAAGACGGTATACAGAGCAGGaa < 1:18264042/35‑1 (MQ=255) tttCGCCAATTTTAAGACGGTATACAGAGCAGGaa < 1:17754976/35‑1 (MQ=255) ttcgccacagaagcgctgcatctgtatgaagattt > 1:17476967‑M2/1‑1 (MQ=255) ttcgccacagaagcgctgcatctgtatgaagattt > 1:17214944‑M2/1‑1 (MQ=255) ttCGCCAATTTTAAGACGGTATACAGAGCAGGaaa > 1:4793120/1‑35 (MQ=255) | ATGTCTTCGCTTGTTTTCGTCTTCATTTTCCTTTTTCGCCAATTTTAAGACGGTATACAGAGCAGGAAA > REL606/4432965‑4433033 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |