New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2345628 | 69 (0.670) | 11 (0.120) | 6/44 | NT | 10.6% | coding (16/501 nt) | nuoE | NADH dehydrogenase subunit E |
? | REL606 | 3882315 = | 123 (1.310) | coding (103/816 nt) | atpB | F0F1 ATP synthase subunit A |
TGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2345593‑2345628 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGGGGGTTTTGTGGATCCACCAGCGAGAATGTACG > REL606/3882315‑3882348 TGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTT < 1:15234546/35‑1 TGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTT < 1:14996016/35‑1 GCCGCACTCAGCTCAAAAGCCTCTGTTTGTGGTTG > 1:19192450/1‑35 GCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTG < 1:4950039/35‑1 GCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTG < 1:4987627/35‑1 GCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGGTG > 1:13834431/1‑35 CCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGG > 1:1489066/1‑35 CCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGG > 1:13733837/1‑35 CCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGG > 1:9974065/1‑35 CGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGG > 1:13240416/1‑35 CGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGG > 1:8377829/1‑35 CGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGG > 1:3870900/1‑35 CGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGG > 1:19684919/1‑35 CGCACTCAGCTCAAAAGCCTCGGGTTGTGGTTGGG > 1:8201108/1‑35 GCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGGG > 1:594025/1‑35 GCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGGG > 1:9514605/1‑35 GCACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGGG > 1:16249861/1‑35 CACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGGGG > 1:20263003/1‑35 CACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGGGG > 1:1031497/1‑35 ACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGGGGt > 1:9540653/1‑34 ACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGGGGt > 1:17746025/1‑34 ACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGGGGt > 1:9190161/1‑34 ACTCAGCTCAAAAGCCTCGGTTTGTGGTTGGGGGG > 1:5418876/1‑35 CTCAGCTCAAAAGCCTCGGTTTGTGGTTGGGGGGg > 1:8137086/1‑34 CTCAGCTCAAAAGCCTCGGTTTGTGGTTGGGGGGT > 1:2571547/1‑35 CAGCTCAAAAGCCTCGGTTTGTGGTTGGGGGGTTT > 1:17624010/1‑35 GCTCAAAAGCCTCGGTTTGTGGTTGGGGGGTTTTc > 1:2800612/1‑34 GCTCAAAAGCCTCGGTTTGTGGTTGGGGGGTTTTG > 1:4700830/1‑35 GCTCAAAAGCCTCGGTTTGTGGTTGGGGGGGTTTc > 1:7944613/1‑34 CTCAAAAGCCTCGGTTTGTGGTTGGGGGGTTTctt > 1:489376/1‑32 CTCAAAAGCCTCGGTTTGTGGTTGGGGGGTTTCGT > 1:14993549/1‑35 TCAAAAGCCTCGGTTTGTGGTTGGGGGTTTTTGTt > 1:19144816/1‑34 TCAAAAGCCTCGGTTTGTGGTTGGGGGGTTTTGTG > 1:1518778/1‑35 CAAAAGCCTCGGTTTGTGGTTGGGGGGTTTTTTGt > 1:6605611/1‑34 CAAAAGCCTCGGTTTGTGGTTGGGGGGTTTTCTGG > 1:14892967/1‑35 TGGGGGGTTTTGTGGATCCACCAGCGAGAATGTAa > 1:18132621/1‑34 TGGGGGGTTTTGTGGATCCACCAGCGAGAATGTAC > 1:14683651/1‑35 TGGGGGGTTTTGTGGATCCACCAGCGAGAATGTAC > 1:15578103/1‑35 TGGGGGGTTTTGTGGATCCACCAGCGAGAATGTAC < 1:9366146/35‑1 TGGGGGGTTTTGTGGATCCACCAGCGAGAATGTAC < 1:9420845/35‑1 TGGGGGGTTTTGGGGATCCACCAGCGAGAATGTAC < 1:4613161/35‑1 GGGGGGTTTTGTGGATCCACCAGCGAGAATGTACG < 1:546117/35‑1 GGGGGGTTTTGTGGATCCACCAGCGAGAATGTACG > 1:7589795/1‑35 GGGGGGTTTTGTGGATCCACCAGCGAGAATGTACG < 1:14291562/35‑1 GGGGGGTTTTGTGGATCCACCAGCGAGAATGTACG > 1:13213844/1‑35 GGGGGGTTTTGTGGATCCACCAGCGAGAATGTACG < 1:1069832/35‑1 GGGGGGTTTTGTGGATCCACCAGCGAGAATGTACG < 1:3194082/35‑1 TGCCGCACTCAGCTCAAAAGCCTCGGTTTGTGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2345593‑2345628 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGGGGGTTTTGTGGATCCACCAGCGAGAATGTACG > REL606/3882315‑3882348 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |