New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2327674 = | 62 (0.600) | 14 (0.160) | 5/42 | NT | 15.8% | coding (383/462 nt) | elaA | predicted acyltransferase with acyl‑CoA N‑acyltransferase domain |
? | REL606 | = 4527187 | 95 (1.060) | coding (1178/2637 nt) | fimD | outer membrane usher protein, type 1 fimbrial synthesis |
CGCAGGCGCATCTGCAAAACTTCTACCAGAGTTTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2327710‑2327674 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGTTTTTCCTGCTGCGCATTTCCACTACGGTATT < REL606/4527187‑4527154 CGCAGGCGCATCTGCAAAACTTCTACCAGAGTTTC < 1:3592264/35‑1 CGCAGGCGCATCTGCAAAACTTCTACCAGAGTTTC > 1:11638273/1‑35 CGCAGGCGCATCTGCAAAACTTCTACCAGAGTTTC < 1:336704/35‑1 CGCAGGCGCATCTGCAAAACTTCTACCAGAGTTTC < 1:12269439/35‑1 CGCAGGCGCATCTGCAAAACTTCTACCAGAGTTTC > 1:15093219/1‑35 CGCAGGCGCATCTGCAAAACTTCTACCAGAGTTTC > 1:16423703/1‑35 CGCAGGCGCATCTGCAAAACTTCTACCAGAGTTTC < 1:6131688/35‑1 CGCAGGCGCATCTGCAAAACTTCTACCAGAGTTTC < 1:19117196/35‑1 gaAGGCGCATCTGCAAAACTTCTACCAGAGTTTCG < 1:4163270/33‑1 GCATGCGCATCTGCAAAACTTCTACCAGAGTTTCG > 1:18378163/1‑35 GCAGGCGCATCTGCAAAACTTCTACCAGAGTTTCa < 1:4135375/35‑2 GCAGGCGCATCTGCAAAACTTCTACCAGAGTTTCG > 1:15549878/1‑35 GCAGGCGCATCTGCAAAACTTCTACCAGAGTTTCG > 1:5983625/1‑35 GCAGGCGCATCTGCAAAACTTCTACCAGAGTTTCG > 1:1479244/1‑35 GCAGGCGCATCTGCAAAACTTCTACCAGAGTTTCG > 1:4931490/1‑35 GCAGGCGCATCTGCAAAACTTCTACCAGAGTTTCG > 1:6894733/1‑35 GCAGGCGCATCTGCAAAACTTCTACCAGAGTTTCG < 1:4585386/35‑1 CAGGCGCATCTGCAAAACTTCTACCAGAGTTTCGG < 1:14076048/35‑1 CAGGCGCATCTGCAAAACTTCTACCAGAGTTTCGG < 1:13509426/35‑1 CAGGCGCATCTGCAAAACTTCTACCAGAGTTTCGG < 1:8290337/35‑1 CAGGCGCATCTGCAAAACTTCTACCAGAGTTTCGG > 1:10182689/1‑35 AGGCGCATCTGCAAAACTTCTACCAGAGTTTCGGG > 1:16183465/1‑35 AGGCGCATCTGCAAAACTTCTACCAGAGTTTCGGG > 1:13143017/1‑35 AGGCGCATCTGCAAAACTTCTACCAGAGTTTCGGG > 1:12327218/1‑35 AGGCGCATCTGCAAAACTTCTACCAGAGTTTCGGG > 1:17330428/1‑35 AGGCGCATCTGCAAAACTTCTACCAGAGTTTCGGG > 1:18323356/1‑35 AGGCGCATCTGCAAAACTTCTACCAGAGTTTCGGG > 1:3767543/1‑35 GGCGCATCTGCAAAACTTCTACCAGAGTTTCGGGt > 1:19369526/1‑34 GGCGCATCTGCAAAACTTCTACCAGAGTTTCGGGG > 1:1549973/1‑35 GGCGCATCTGCAAAACTTCTACCAGAGTTTCGGGG > 1:15694487/1‑35 GCGCATCTGCAAAACTTCTACCAGAGTTTCGGGGT > 1:4950344/1‑35 CGCATCTGCAAAACTTCTACCAGAGTTTCGGGTTT > 1:20225992/1‑35 CGCATCTGCAAAACTTCTACCAGAGTTTCGGGTTT > 1:20553211/1‑35 CGCATCTGCAAAACTTCTACCAGAGTTTCGGGGTT > 1:516449/1‑35 CGCATCTGCAAAACTTCTACCAGAGTTTCGGGGTT > 1:5190630/1‑35 CGCATCTGCAAAACTTCTACCAGAGTTTCGGGGTT > 1:8451656/1‑35 GCATCTGCAAAACTTCTACCAGAGTTTCGGGGTTa > 1:9272248/1‑34 GCATCTGCAAAACTTCTACCAGAGTTTCGGGGTTT > 1:8373654/1‑35 GCATCTGCAAAACTTCTACCAGAGTTTCGGGGTTT > 1:15020967/1‑35 GCATCTGCAAAACTTCTACCAGAGTTTCGGGGTTT > 1:17593421/1‑35 GCATCTGCAAAACTTCTACCAGAGTTTCGGGGTTT > 1:20023753/1‑35 GCATCTGCAAAACTTCTACCAGAGTTTCGGGGGTT > 1:8733668/1‑35 CATCTGCAAAACTTCTACCAGAGTTTCGGGGTTTT > 1:3597997/1‑35 ATCTGCAAAACTTCTACCAGAGTTTCGGGTTTTTT > 1:1296029/1‑35 ATCTGCAAAACTTCTACCAGAGTTTCGGGGTTTTg > 1:796299/1‑34 ATCTGCAAAACTTCTACCAGAGTTTCGGGGTTTTT > 1:736841/1‑35 TCTGCAAAACTTCTACCAGAGTTTCGGGGTTTTTC > 1:12030833/1‑35 TCTGCAAAACTTCTACCAGAGTTTCGGGGTTTTTC > 1:9573883/1‑35 TGCAAAACTTCTACCAGAGTTTCGGGGTTTTTTCT > 1:8006457/1‑35 TGCAAAACTTCTACCAGAGTTTCGGGGTTTTTCCT > 1:3853235/1‑35 GCAAAACTTCTACCAGAGTTTCGGGTTTTTTCCTG > 1:8179828/1‑35 GCAAAACTTCTACCAGAGTTTCGGGGTTTTTTCTG > 1:15619384/1‑35 GCAAAACTTCTACCAGAGTTTCGGGGTTTTTCCTG > 1:9634913/1‑35 CAAAACTTCTACCAGAGTTTCGGGGTTTTTCCTtt > 1:7767723/1‑33 CAAAACTTCTACCAGAGTTTCGGGGTTTTCCCTGt > 1:18760472/1‑34 AAAACTTCTACCAGAGTTTCGGGGTTTTTCCTctt > 1:701299/1‑32 CGGGGTTTTTCCTGCTGCGCATTTCCACTACGGTA > 1:1553653/1‑35 CGGGGTTTTTCCTGCTGCGCATTTCCACTACGGTA < 1:15706207/35‑1 CGGGGTTTTTCCTGCTGCGCATTTCCACTACGGTA > 1:2722963/1‑35 CGGGGTTTTTCCTGCTGCGCATTTCCACTACGGTA > 1:2371257/1‑35 CGGGGTTTTTCCTGCTGCGCATTTCCACTACGGTA > 1:20334063/1‑35 GGGGTTTTTCCTGCTGCGCATTTCCACTACGGTAT < 1:16665662/35‑1 GGGGTTTTTCCTGCTGCGCATTTCCACTACGGTAT > 1:16917039/1‑35 GGGGTTTTTCCTGCTGCGCATTTCCACTACGGTAT > 1:4314041/1‑35 GGGGTTTTTCCTGCTGCGCATTTCCACTACGGTAT > 1:18516651/1‑35 GGGGTTTTTCCTGCTGCGCATTTCCACTACGGTAT < 1:12188887/35‑1 GGGGTTTTTCCTGCTGCGCATTTCCACTACGGTAT < 1:18878891/35‑1 GGGGTTTTTCCTGCTGCGCATTTCCACTACGGTAT > 1:11914876/1‑35 GGGGTTTTTCCTGCTGCGCATTTCCACTACGGTAT < 1:10946702/35‑1 GGGTTTTTCCTGCTGCGCATTTCCACTACGGTATT < 1:13751292/35‑1 GGGTTTTTCCTGCTGCGCATTTCCACTACGGTATT > 1:5850350/1‑35 CGCAGGCGCATCTGCAAAACTTCTACCAGAGTTTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2327710‑2327674 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGTTTTTCCTGCTGCGCATTTCCACTACGGTATT < REL606/4527187‑4527154 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |