New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2377427 = | 84 (0.820) | 11 (0.120) | 6/42 | NT | 16.1% | coding (92/915 nt) | accD | acetyl‑CoA carboxylase subunit beta |
? | REL606 | 3367495 = | 41 (0.460) | intergenic (‑81/+26) | yhdN/rplQ | hypothetical protein/50S ribosomal protein L17 |
TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2377463‑2377427 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTG > REL606/3367495‑3367528 TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGC < 1:9682552/35‑1 TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGC > 1:5481479/1‑35 TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGC < 1:2115895/35‑1 TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGC > 1:1927067/1‑35 TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGC < 1:17415386/35‑1 TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGC < 1:16727055/35‑1 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTTCG > 1:397138/1‑35 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG < 1:7420583/35‑1 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG < 1:4366271/35‑1 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG < 1:3759257/35‑1 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG < 1:3377414/35‑1 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG > 1:19024293/1‑35 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG < 1:18008914/35‑1 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG > 1:17544006/1‑35 TCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCG < 1:17480375/35‑1 CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG > 1:7951529/1‑35 CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG < 1:17284911/35‑1 CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG > 1:9154888/1‑35 CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG > 1:16346528/1‑35 CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG < 1:641646/35‑1 CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG > 1:14172894/1‑35 CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG < 1:17776412/35‑1 CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG > 1:20546010/1‑35 CCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG < 1:20243951/35‑1 CTGAATGGGTGTGGACTAAGTGTGATAGCTGCGGG > 1:15307373/1‑35 CTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGGG > 1:17650155/1‑35 CTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGGG > 1:13378706/1‑35 TGAAGGGGTGTGGACTAAGTGTGATAGCTGCGGGc > 1:15785729/1‑34 TGAAGGGGTGTGGACTAAGTGTGATAGCTGCGGGG > 1:19639994/1‑35 GAAGGGGTGTGGACTAAGTGTGATAGCTGCGGGtc > 1:154067/1‑33 GAAGGGGTGTGGACTAAGTGTGATAGCTGCGGGGa > 1:960621/1‑34 GAAGGGGTGTGGACTAAGTGTGATAGCTGCGGGGa > 1:5047131/1‑34 AAGGGGTGTGGACTAAGTGTGATAGCTGCGGGcgg > 1:1341177/1‑32 AAGGGGTGTGGACTAAGTGTGATAGCTGCGGGCCG > 1:1774825/1‑35 GGGGTGTGGACTAAGTGTGATAGCTGCGGGGGGGG > 1:4769571/1‑35 GGTGTGGACTAAGTGTGATAGCTGCGGGGAGGGTT > 1:7158767/1‑35 GGTGTGGACTAAGTGTGATAGCTGCGGGGAGGGTT > 1:16132828/1‑35 GTGTGGACTAAGTGTGATAGCTGCGGGGGGGGTTT > 1:6111191/1‑35 GTGTGGACTAAGTGTGATAGCTGCGGGGGGGGTTT > 1:16525521/1‑35 GTGTGGACTAAGTGTGATAGCTGCGGGGAGGGTTT > 1:16043175/1‑35 TGTGGACTAAGTGTGATAGCTGCGGGGCGGGTTTT > 1:1390425/1‑35 TGTGGACTAAGTGTGATAGCTGCGGGGAGGGTTTT > 1:12183143/1‑35 GTGGACTAAGTGTGATAGCTGCGGGGTGGGTTTTT > 1:15294299/1‑35 TGGACTAAGTGTGATAGCTGCGGGGTGGGTTTTTa > 1:19179028/1‑34 TGGACTAAGTGTGATAGCTGCGGGGCGGGTTTTTT > 1:2572033/1‑35 GGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTG < 1:11691360/35‑1 GGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTG > 1:6860370/1‑35 GGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTG > 1:16674867/1‑35 GGGCGGGTTTTTTTACGTTGATTCAGATTACTCTG < 1:769407/35‑1 TTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2377463‑2377427 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTG > REL606/3367495‑3367528 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |