New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2064681 = | 76 (0.740) | 9 (0.120) | 3/36 | NT | 12.3% | coding (596/1218 nt) | wcaC | predicted glycosyl transferase |
? | REL606 | 4179328 = | 71 (0.920) | coding (213/591 nt) | yjaG | hypothetical protein |
Only 100 of 174 total aligned reads displayed.
ACCGTACAGGCTATTGAAAGCGTCAGCCACATG‑CTGGCTGGGGGAAATAAACTGACAGCCCAGCGCCAG > REL606/2064647‑2064715 | cccGTACAGGCTATTGAAAGCGTCAGCCACATg‑ct < 1:12170670/34‑1 (MQ=255) aCCGTACAGGCTATTGAAAGCGTCAGCCACATg‑ct < 1:15472903/35‑1 (MQ=255) ggctgaaggaatcgcttcttcaaatttctccagtt > 1:10955647‑M1/35‑35 (MQ=255) ggctgaaggaatcgcttcttcaaatttctccagtt < 1:280647‑M1/1‑1 (MQ=255) ggctgaaggaatcgcttcttcaaatttctccagtt > 1:11301926‑M1/35‑35 (MQ=255) ggctgaaggaatcgcttcttcaaatttctccagtt > 1:16079632‑M1/35‑35 (MQ=255) ccGTACAGGCTATTGAAAGCGTCAGCCACATg‑ctg < 1:20471612/35‑1 (MQ=255) ccGTACAGGCTATTGAAAGCGTCAGCCACATg‑ctg < 1:12944591/35‑1 (MQ=255) ccGTACAGGCTATTGAAAGCGTCAGCCACATg‑ctg < 1:12200092/35‑1 (MQ=255) gctgaaggaatcgcttcttcaaatttctccagtTg < 1:5301391‑M1/2‑1 (MQ=255) gctgaaggaatcgcttcttcaaatttctccagtTg > 1:20036637‑M1/34‑35 (MQ=255) gctgaaggaatcgcttcttcaaatttctccagtTg > 1:1055468‑M1/34‑35 (MQ=255) gctgaaggaatcgcttcttcaaatttctccagtTg < 1:12098640‑M1/2‑1 (MQ=255) cGTACAGGTTATTGAAAGCGTCAGCCACATg‑ctgg < 1:3507818/35‑1 (MQ=255) ctgaaggaatcgcttcttcaaatttctccagtTgg > 1:7570409‑M1/33‑35 (MQ=255) ctgaaggaatcgcttcttcaaatttctccagtTgg < 1:16083963‑M1/3‑1 (MQ=255) ctgaaggaatcgcttcttcaaatttctccagtTgg > 1:7817306‑M1/33‑35 (MQ=255) ctgaaggaatcgcttcttcaaatttctccagtTgg > 1:17170987‑M1/33‑35 (MQ=255) ctgaaggaatcgcttcttcaaatttctccagtTgg < 1:8817181‑M1/3‑1 (MQ=255) ctgaaggaatcgcttcttcaaatttctccagtTgg > 1:20375443‑M1/33‑35 (MQ=255) tgaaggaatcgcttcttcaaatttctccagtTGGc < 1:15938525‑M1/4‑1 (MQ=255) tgaaggaatcgcttcttcaaatttctccagtTGGc < 1:17582593‑M1/4‑1 (MQ=255) tgaaggaatcgcttcttcaaatttctccagtTGGc > 1:18483334‑M1/32‑35 (MQ=255) tgaaggaatcgcttcttcaaatttctccagtTGGc < 1:2694775‑M1/4‑1 (MQ=255) tgaaggaatcgcttcttcaaatttctccagtTGGc > 1:14270‑M1/32‑35 (MQ=255) tgaaggaatcgcttcttcaaatttctccagtTGGc > 1:8525387‑M1/32‑35 (MQ=255) tgaaggaatcgcttcttcaaatttctccagtTGGc > 1:11788339‑M1/32‑35 (MQ=255) tgaaggaatcgcttcttcaaatttctccagtCGGc < 1:14114589‑M1/4‑1 (MQ=255) gaaggaatcgcttcttcaaatttctccagtTGGCt > 1:13825741‑M1/31‑35 (MQ=255) gaaggaatcgcttcttcaaatttctccagtTGGCt > 1:20496995‑M1/31‑35 (MQ=255) gaaggaatcgcttcttcaaatttctccagtTGGCt < 1:1314631‑M1/5‑1 (MQ=255) aaggaatcgcttcttcaaatttctccagtTGGCTg > 1:19705683‑M1/30‑35 (MQ=255) aaggaatcgcttcttcaaatttctccagtTGGCTg < 1:13954966‑M1/6‑1 (MQ=255) aaggaatcgcttcttcaaatttctccagtTGGCTg < 1:19662071‑M1/6‑1 (MQ=255) aaggaatcgcttcttcaaatttctccagtTGGCTg < 1:18549264‑M1/6‑1 (MQ=255) aaggaatcgcttcttcaaatttctccagtTGGCTg < 1:3621379‑M1/6‑1 (MQ=255) aaggaatcgcttcttcaaatttctccagtTGGCTg > 1:1146000‑M1/30‑35 (MQ=255) aaggaatcgcttcttcaaatttctccagtTGGCTg > 1:12866114‑M1/30‑35 (MQ=255) aggaatcgcttcttcaaatttctccagtTGGCTgg < 1:2790721‑M1/7‑1 (MQ=255) aGGCTATTGAAAGCGTCAGCCACATG‑CTGGCTggg < 1:5467806/35‑1 (MQ=255) aGGCTATTGAAAGCGTCAGCCACATG‑CTGGCTggg < 1:10022048/35‑1 (MQ=255) ggaatcgcttcttcaaatttctccagtTGGCtggc < 1:15808008‑M1/8‑2 (MQ=255) gaatcgcttcttcaaatttctccagtTGGCTgggg < 1:20261244‑M1/9‑1 (MQ=255) gCTATTGAAAGCGTCAGCCACATG‑CTGGCTggggg > 1:616159/1‑35 (MQ=255) gCTATTGAAAGCGTCAGCCACATG‑CTGGCTggggg > 1:4440911/1‑35 (MQ=255) gCTATTGAAAGCGTCAGCCACATG‑CTGGCTggggg > 1:10381999/1‑35 (MQ=255) gCTATTGAAAGCGTCAGCCACATG‑CTGGCTggggg < 1:211329/35‑1 (MQ=255) cTATTGAAAGCGTCAGCCACATG‑CTGGCTgggggg > 1:2372539/1‑34 (MQ=255) cTATTGAAAGCGTCAGCCACATG‑CTGGCTGGGGGa < 1:7407775/35‑1 (MQ=255) aatcgcttcttcaaatttctccagtTGGCTggggg < 1:8125240‑M1/10‑1 (MQ=255) aatcgcttcttcaaatttctccagtTGGCTggggg < 1:4665525‑M1/10‑1 (MQ=255) tATTGAAAGCGTCAGCCACATG‑CTGGCTGGGGGaa < 1:18448326/35‑1 (MQ=255) tATTGAAAGCGTCAGCCACATG‑CTGGCTGGGGGaa < 1:19243191/35‑1 (MQ=255) atcgcttcttcaaatttctccagtTGGCtgggggg < 1:5995870‑M1/11‑2 (MQ=255) atcgcttcttcaaatttctccagtTGGCTGGGGGa < 1:11160266‑M1/11‑1 (MQ=255) tcgcttcttcaaatttctccagtTGGCTGGGGGaa < 1:4988885‑M1/12‑1 (MQ=255) aTTGAAAGCGTCAGCCACATGCCTGGCGGGGGGac > 1:20176640/1‑34 (MQ=21) aTTGAAAGCGTCAGCCACATG‑CTGGCTGGGGGaaa < 1:17621082/35‑1 (MQ=255) aTTGAAAGCGCCAGCCACATG‑CTGGCTGGGGGaaa < 1:18359911/35‑1 (MQ=255) ttGAAAGCGTCAGCCACATG‑CTGGCTGGGGGAAAt < 1:20102198/35‑1 (MQ=255) tGAAAGCGTCAGCCACATG‑CTGGCTGGGGGGAATa > 1:9006700/1‑35 (MQ=255) gcttcttcaaatttctccagtTGGCTGGGGGAAAt < 1:19456797‑M1/14‑1 (MQ=255) gAAAGCGTCAGCCACATG‑CTGGCTGGGGGGAATaa > 1:1114225/1‑35 (MQ=255) gAAAGCGTCAGCCACATG‑CTGGCTGGGGGGAATaa > 1:5795912/1‑35 (MQ=255) ttcttcaaatttctccagtTGGCTGGGGGAaattt < 1:16480663‑M1/16‑3 (MQ=255) aaaGCGTCAGCCACATG‑CTGGCTGGGGGAAATaaa < 1:10300009/35‑1 (MQ=255) aaaGCGTCAGCCACATG‑CTGGCTGGGGGAAATaaa < 1:541672/35‑1 (MQ=255) aaaGCGTCAGCCACATG‑CTGGCTGGGGGAAATaaa < 1:4724371/35‑1 (MQ=255) aGCGTCAGCCACATG‑CTGGCTGGGGGAAATAAACt < 1:12922575/35‑1 (MQ=255) aGCGTCAGCCACATG‑CTGGCTGGGGGAAATAAACt < 1:5688927/35‑1 (MQ=255) gCGTCAGCCACATG‑CTGGCTGGGGGAAATAAACTg < 1:13703196/35‑1 (MQ=255) gCGTCAGCCACATG‑CTGGCTGGGGGAAATAAACTg < 1:482363/35‑1 (MQ=255) gCGTCAGCCACATG‑CTGGCTGGGGGAAATAAACTg < 1:20314105/35‑1 (MQ=255) gCGCCAGCCACATG‑CTGGCTGGGGGAAATAAACTg < 1:18636109/35‑1 (MQ=255) tgTCAGCCACATG‑CTGGCTGGGGGAAATAAACTGa < 1:19472719/34‑1 (MQ=255) cgccAGCCACATG‑CTGGCTGGGGGAAATAAACTGa < 1:788555/32‑1 (MQ=255) cGTCAGCCACATG‑CTGGCTGGGGGAAATAAACTGa < 1:14224740/35‑1 (MQ=255) cGTCAGCCACATG‑CTGGCTGGGGGAAATAAACTGa > 1:1377784/1‑35 (MQ=255) gTCAGCCACATG‑CTGGCTGGGGGAAATAAACTGAc < 1:8786198/35‑1 (MQ=255) tCAGCCACATG‑CTGGCTGGGGGAGATAAACTGACa < 1:1161589/35‑1 (MQ=255) tCAGCCACATG‑CTGGCTGGGGGAAATAAACTGACa > 1:9268779/1‑35 (MQ=255) cAGCCACATG‑CTGGCTGGGGGAAATAAACTGACAg < 1:7680144/35‑1 (MQ=255) gCCACATG‑CTTGCTGGGGGACATAAACTGACATcc > 1:10163362/1‑35 (MQ=25) gCCACATG‑CTGGCTGGGGGAAATAAACTGACAGcc > 1:14413667/1‑35 (MQ=255) cacaTG‑CTGGCTGGGGGAAATAAACTGACAGCCCa < 1:15196868/35‑1 (MQ=255) cacaTG‑CTGGCTGGGGGAAATAAACTGACAGCCCa < 1:10054346/35‑1 (MQ=255) acaTG‑CTGGCTGGGGGAAATAAACTGACAGCCCAg < 1:11875594/35‑1 (MQ=255) acaTG‑CTGGCTGGGGGAAATAAACTGACAGCCCAg > 1:15044881/1‑35 (MQ=255) acaTG‑CTGGCTGGGGGAAATAAACTGACAGCCCAg < 1:19590400/35‑1 (MQ=255) acaTG‑CTGGCTGGGGGAAATAAACTGACAGCCCAg > 1:2863694/1‑35 (MQ=255) caTG‑CTGGCTGGGGGAAATAAACTGACAGCCCAgc > 1:12306273/1‑35 (MQ=255) caTG‑CTGGCTGGGGGAAATAAACTGACAGCCCAgc < 1:4713936/35‑1 (MQ=255) ttG‑CGGGCTGGGGAAAATAAACTGACAGCCCAgcg < 1:490010/34‑1 (MQ=37) aTG‑CTGGCGGGGGGAAATAAACTGACAGCCCAgcg < 1:6608766/35‑1 (MQ=255) tG‑CTGGCTGGGGGAAATAAACTGACAGCCCAgcgc < 1:4111240/35‑1 (MQ=255) tG‑CTGGCTGGGGGAAATAAACTGACAGCCCAgcgc > 1:15681260/1‑35 (MQ=255) ctggctggGGGAAATAAACTGACAGCCCAGCGCCa > 1:5934652/1‑35 (MQ=255) ctggctggGGGAAATAAACTGACAGCCCAGCGCCa > 1:13726429/1‑35 (MQ=255) TGGCTGGGGGAAATAAACTGACAGCCCAGCGCCAg > 1:13531743‑M1/1‑35 (MQ=255) TGGCTGGGGGAAATAAACTGACAGCCCAGCGCCAg < 1:8726165‑M1/35‑1 (MQ=255) | ACCGTACAGGCTATTGAAAGCGTCAGCCACATG‑CTGGCTGGGGGAAATAAACTGACAGCCCAGCGCCAG > REL606/2064647‑2064715 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |