New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2175017 | 45 (0.440) | 18 (0.200) | 5/42 | NT | 24.6% | coding (1595/1716 nt) | dld | D‑lactate dehydrogenase, FAD‑binding, NADH independent |
? | REL606 | = 4351424 | 71 (0.790) | intergenic (+32/‑106) | groEL/yjeI | chaperonin GroEL/hypothetical protein |
Only 100 of 117 total aligned reads displayed.
CGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAG > REL606/2174983‑2175051 | cgcggcgcgCAGTACCCTGCCGAGCATAACGTCGG < 1:19848530‑M1/35‑1 (MQ=255) gcggcgcgCAGTACCCTGCCGAGCATAACGTCGGt < 1:14493287/35‑1 (MQ=255) gcggcgcgCAGTACCCTGCCGAGCATAACGTCGGt < 1:18753653/35‑1 (MQ=255) cggcgggCAGTACCCTGCCGAGCATAACGTCGGTc < 1:2834705/35‑1 (MQ=255) cggcgcgCAGTACCCTGCCGAGCATAACGTCGGgg > 1:14213556‑M1/1‑33 (MQ=255) cggcgcgCAGTACCCTGCCGAGCATAACGTCGGgg > 1:11647137‑M1/1‑33 (MQ=255) cggcgcgCAGTACCCTGCCGAGCATAACGTCGGTc < 1:5003859/35‑1 (MQ=255) ggcgcgCAGTACCCTGCCGAGCATAACGTCGGgcg > 1:19406406‑M1/1‑32 (MQ=255) gcgcgcAGTGCCCTGCCGAGCATAACGTCGGTCAt < 1:3992485/35‑1 (MQ=255) gcgcgcAGTACCCTTCCGAGCATAACGTCGGgggg > 1:14190980‑M1/1‑31 (MQ=255) gcgcgcAGTACCCTGCCGAGCATAACGTCGGggcg > 1:10060314‑M1/1‑31 (MQ=255) gcgcgcAGTACCCTGCCGAGCATAACGTCGGgcgt > 1:11030691‑M1/1‑31 (MQ=255) gcgcgcAGTACCCTGCCGAGCATAACGTCGGTCAt < 1:17873122/35‑1 (MQ=255) gcgcgcAGTACCCTGCCGAGCATAACGTCGGTCAt < 1:14613047/35‑1 (MQ=255) gcgcgcAGTACCCTGCCGAGCATAACGTCGGTCAt < 1:5168851/35‑1 (MQ=255) gcgcgcAGTACCCTGCCGAGCATAACGTCGGTCAt < 1:5438760/35‑1 (MQ=255) cgcgcAGTACCCTGCCGAGCATAACGTCGGggggt > 1:12481939‑M1/1‑30 (MQ=255) cgcgcAGTACCCTGCCGAGCATAACGTCGGTCAtt < 1:1851423/35‑1 (MQ=255) gcgcAGTACCCTGCCGAGCATAACGTCGGgggttt > 1:15252824‑M1/1‑29 (MQ=255) gcgcAGTACCCTGCCGAGCATAACGTCGGgggttt > 1:14629470‑M1/1‑29 (MQ=255) gcgcAGTACCCTGCCGAGCATAACGTCGGggggtt > 1:1836624‑M1/1‑29 (MQ=255) gcgcAGTACCCTGCCGAGCATAACGTCGGggggtt > 1:10700903‑M1/1‑29 (MQ=255) gcgcAGTACCCTGCCGAGCATAACGTCGGgggcgt > 1:15718224‑M1/1‑29 (MQ=255) gcgcAGTACCCTGCCGAGCATAACGTCGGTCAttt < 1:19105100/35‑1 (MQ=255) cgcAGTCCCCTGCCGAGCATAACGTCGGTCATTTg < 1:12019357/35‑1 (MQ=255) cgcAGTACCCTGCCGAGCATAACGTCGGgggtttg > 1:11689061‑M1/1‑28 (MQ=255) cgcAGTACCCTGCCGAGCATAACGTCGGggggttt > 1:16122291‑M1/1‑28 (MQ=255) gcAGTACCCTGCCGAGCATAACGTCGGgggcttgt > 1:13438375‑M1/1‑27 (MQ=255) gcAGTACCCTGCCGAGCATAACGTCGGTCATTTGt < 1:20115638/35‑1 (MQ=255) cAGTACCCTGCCGAGCATAACGTAGGTCATTTGta < 1:14578141/35‑1 (MQ=255) aGTACCCTGCCTAGCATAACGTCGGgggtttgttt > 1:19566853‑M1/1‑25 (MQ=255) aGTACCCTGCCGAGCATAACGTCGGgggttttttt > 1:10724678‑M1/1‑25 (MQ=255) aGTACCCTGCCGAGCATAACGTCGGgggtttgttt > 1:6130990‑M1/1‑25 (MQ=255) aGTACCCTGCCGAGCATAACGTCGGgggtttgttt > 1:2099526‑M1/1‑25 (MQ=255) aGTACCCTGCCGAGCATAACGTCGGggggttgttt > 1:17978284‑M1/1‑25 (MQ=255) aGTACCCTGCCGAGCATAACGTCGGTCATTTGtat < 1:19120361/35‑1 (MQ=255) gTACCCTGCCGAGCATAACGTCGTTCATTTGtata > 1:18633362/1‑35 (MQ=255) gTACCCTGCCGAGCATAACGTCGGgggtttgttta > 1:9077867‑M1/1‑24 (MQ=255) gTACCCTGCCGAGCATAACGTCGGgggtttgttta > 1:18030506‑M1/1‑24 (MQ=255) gTACCCTGCCGAGCATAACGTCGGTCATTTGtata < 1:19089313/35‑1 (MQ=255) tACCCTGCCGAGCATAACGTCGGgggtttgtttta > 1:9718289‑M1/1‑23 (MQ=255) tACCCTGCCGAGCATAACGTCGGTCATTTGTATaa < 1:2650892/35‑1 (MQ=255) tACCCTGCCGAGCATAACGTCGGTCATTTGTATaa < 1:11191560/35‑1 (MQ=255) tACCCTGCCGAGCATAACGTCGGTCATTTGTATaa < 1:1558765/35‑1 (MQ=255) tACCCTGCCGAGCATAACGTCGGTCATTTGTATaa < 1:6012735/35‑1 (MQ=255) aCCCTGCCGAGCATAACGTCGGgggtttgtttaaa > 1:5807797‑M1/1‑22 (MQ=255) aCCCTGCCGAGCATAACGTCGGTCATTTGTATaaa < 1:136738/35‑1 (MQ=255) cccTGCCGAGCATAACGTCGGTCATTTGTATAAAg < 1:8622516/35‑1 (MQ=255) cccTGCCGAGCATAACGTCGGTCATTTGTATAAAg < 1:14256808/35‑1 (MQ=255) ccTGCCGAGCATAACGTCGGTCATTTGTATAAAGc < 1:16479048/35‑1 (MQ=255) ccTGCCGAGCATAACGTCGGTCATTTGTATAAAGc < 1:5034983/35‑1 (MQ=255) ccTGCCGAGCATAACGTCGGTCATTTGTATAAAGc < 1:17481187/35‑1 (MQ=255) cTGCCGAGCATAACGTCGGTCATTTGTATAAAGCa < 1:3873706/35‑1 (MQ=255) cTGCCGAGCATAACGTCGGTCATTTGTATAAAGCa < 1:2361175/35‑1 (MQ=255) tGCCGAGCATAACGTCGGTCATTTGTATAAAGCAc < 1:7685874/35‑1 (MQ=255) tGCCGAGCATAACGTCGGTCATTTGTATAAAGCAc < 1:7772982/35‑1 (MQ=255) tGCCGAGCATAACGTCGGTCATTCGTATAAAGCAc < 1:3025645/35‑1 (MQ=255) gCCGAGCATAACGTCGGTCATTTGTATAAAGCAcc < 1:1015561/35‑1 (MQ=255) gCCGAGCATAACGTCGGTCATTTGTATAAAGCAcc < 1:3900107/35‑1 (MQ=255) ccGAGCATAACGTCGGTCATTTGTATAAAGCACCg < 1:1829335/35‑1 (MQ=255) ccGAGCATAACGTCGGTCATTTGTATAAAGCACCg < 1:14612145/35‑1 (MQ=255) ccGAGCATAACGTCGGTCATTTGTATAAAGCACCg < 1:13304062/35‑1 (MQ=255) cGAGCATAACGTCGGTCATTTGTATAAAGCACCgg < 1:3337048/35‑1 (MQ=255) gAGCATAACGTCGGTCATTTGTATAAAGCACCGga < 1:17540629/35‑1 (MQ=255) gAGCATAACGTCGGTCATTTGTATAAAGCACCGga < 1:16635903/35‑1 (MQ=255) gCATAACGTCGGTCATTTGTATAAAGCACCGgaga < 1:11567038/35‑1 (MQ=255) cATAACGTCGGTCATTTGTATAAAGCACAGGAGAc < 1:18281849/35‑1 (MQ=255) aTAACGTCGGTCATTTGTATAAAGCACCGGAGACg < 1:2034597/35‑1 (MQ=255) aaCGTCGGTCATTTGTATAAAGCACCGGAGACGtt < 1:535191/35‑1 (MQ=255) aCGTCGGTCATTTGTATAAAGCACCGGAGACGTTg < 1:14730033/35‑1 (MQ=255) aCGTCGGTCATTTGTATAAAGCACCGGAGACGTTg < 1:727468/35‑1 (MQ=255) cGTCGGTCATTTGTATAAAGCACCGGAGACGTTGc < 1:8833344/35‑1 (MQ=255) tCGGTCATTTGTATAAAGCACCGGAGACGTTGCAg < 1:18098940/35‑1 (MQ=255) tCGGTCATTTGTATAAAGCACCGGAGACGTTGCAg > 1:5440604/1‑35 (MQ=255) cGGgggtttgtttatttctgcgaggtgcagggcaa < 1:11869863‑M1/35‑33 (MQ=255) cGGgggtttgtttatttctgcgaggtgcagggcaa > 1:10203531‑M1/1‑3 (MQ=255) cGGgggtttgtttatttctgcgaggtgcagggcaa < 1:4557813‑M1/35‑33 (MQ=255) cGGgggtttgtttatttctgcgaggtgcagggcaa > 1:19998198‑M1/1‑3 (MQ=255) cGGgggtttgtttatttctgcgaggtgcagggcaa > 1:11350703‑M1/1‑3 (MQ=255) cGGgggtttgtttatttctgcgaggtgcagggcaa < 1:19610090‑M1/35‑33 (MQ=255) cGGgggtttgtttatttctgcgaggtgcagggcaa > 1:15057937‑M1/1‑3 (MQ=255) cGGTCATTTGTATAAAGCACCGGAGACGTTGCAGa > 1:6858823/1‑35 (MQ=255) cGGTCATTTGTATAAAGCACCGGAGACGTTGCAGa > 1:1813894/1‑35 (MQ=255) gggggtttgtttatttctgcgaggtgcagggcaat > 1:14144553‑M1/1‑2 (MQ=255) gggggtttgtttatttctgcgaggtgcagggcaat < 1:9627458‑M1/35‑34 (MQ=255) gggggtttgtttatttctgcgaggtgcagggcaat > 1:2760637‑M1/1‑2 (MQ=255) ggTCATTTGTATAAAGCACCGGAGACGTTGCAGaa < 1:1795672/35‑1 (MQ=255) ggTCATTTGTATAAAGCACCGGAGACGTTGCAGaa > 1:14948183/1‑35 (MQ=255) ggTCATTTGTATAAAGCACCGGAGACGTTGCAGaa < 1:4105691/35‑1 (MQ=255) ggTCATTTGTATAAAGCACAGGAGACGTTGCAGaa < 1:11088533/35‑1 (MQ=255) ggggtttgtttatttctgcgaggtgcagggcaatt < 1:3395061‑M1/35‑35 (MQ=255) ggggtttgtttatttctgcgaggtgcagggcaatt < 1:7434416‑M1/35‑35 (MQ=255) ggggtttgtttatttctgcgaggtgcagggcaatt < 1:5249767‑M1/35‑35 (MQ=255) ggggtttgtttatttctgcgaggtgcagggcaatt < 1:19018367‑M1/35‑35 (MQ=255) ggggtttgtttatttctgcgaggtgcagggcaatt > 1:18727524‑M1/1‑1 (MQ=255) ggggtttgtttatttctacgaggtgcagggcaatt > 1:15312742‑M1/1‑1 (MQ=255) gTCATTTGTATAAATCACCGGAGACGTTGCAGAAg > 1:12478498/1‑35 (MQ=255) gTCATTTGTATAAAGCACCGGAGACGTTGCAGAAg > 1:16594239/1‑35 (MQ=255) gTCATTTGTATAAAGCACCGGAGACGTTGCAGAAg < 1:10510602/35‑1 (MQ=255) gTCATTTGTATAAAGCACCGGAGAAGTTGCAGAAg < 1:7216656/35‑1 (MQ=255) | CGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAG > REL606/2174983‑2175051 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |