New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1306326 = | 88 (0.860) | 10 (0.170) | 3/28 | NT | 18.1% | intergenic (‑87/+284) | cls/kch | cardiolipin synthetase/voltage‑gated potassium channel |
? | REL606 | = 2380515 | 39 (0.650) | coding (929/1137 nt) | pdxB | erythronate‑4‑phosphate dehydrogenase |
Only 100 of 199 total aligned reads displayed.
CATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGCGGGGGTATAATGACCATTC > REL606/1306292‑1306358 | cggcgcacatcatacaccaaatgcaccagcctttt < 1:14938720‑M1/1‑1 (MQ=255) ggcgcacatcatacaccaaatgcaccagcctttTc > 1:9517762‑M1/34‑35 (MQ=255) aTCTGGCAAATAAAAACGCGGGAAAAGCACTGGTc < 1:4051194/35‑1 (MQ=255) aTCTGGCAAATAAAAACGCGGGAAAAGCACTGGTc < 1:4280623/35‑1 (MQ=255) aTCTGGCAAATAAAAACGCGGGAAAAGCACTGGTc > 1:4529584/1‑35 (MQ=255) tCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCa < 1:16788840/35‑1 (MQ=255) tCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCa < 1:871400/35‑1 (MQ=255) tCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCa < 1:14480699/35‑1 (MQ=255) tCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCa < 1:14398327/35‑1 (MQ=255) tCTAGCAAATAAAAACGCGGGAAAAGCACTGGTCa < 1:14570293/35‑1 (MQ=255) gcgcacatcatacaccaaatgcaccagcctttTCa > 1:5328430‑M1/33‑35 (MQ=255) gcgcacatcatacaccaaatgcaccagcctttTCa < 1:20551576‑M1/3‑1 (MQ=255) cgcacatcatacaccaaatgcaccagcctttTCAg < 1:10649232‑M1/4‑1 (MQ=255) cgcacatcatacaccaaatgcaccagcctttTCAg > 1:14150806‑M1/32‑35 (MQ=255) cTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAg < 1:15308929/35‑1 (MQ=255) cTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAg < 1:15338593/35‑1 (MQ=255) cTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAg > 1:18218715/1‑35 (MQ=255) tGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGc > 1:19103732/1‑35 (MQ=255) tGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGc > 1:2355051/1‑35 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc > 1:18722131‑M1/31‑35 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc > 1:12818719‑M1/31‑35 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc > 1:2902803‑M1/31‑35 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc > 1:11029556‑M1/31‑35 (MQ=255) ggCAAATAAAAACGCGGGAAAAGCACTGGTCAGCg < 1:13556982/35‑1 (MQ=255) ggCAAATAAAAACGCGGGAAAAGCACTGGTCAGCg > 1:17275964/1‑35 (MQ=255) ggCAAATAAAAACGCGGGAAAAGCACTGGTCAGCg > 1:11500006/1‑35 (MQ=255) ggCAAATAAAAACGCGGGAAAAGCACTGGTCAGCg > 1:16392293/1‑35 (MQ=255) gCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGt < 1:17766402/35‑1 (MQ=255) gCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGt > 1:14352045/1‑35 (MQ=255) gCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGt < 1:20129171/35‑1 (MQ=255) gCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGt > 1:7975748/1‑35 (MQ=255) acatcatactccaaatgcaccagcctttTCAGCGt < 1:15609913‑M1/7‑1 (MQ=255) acatcatacaccaaatgcaccagcctttTCAGCGt > 1:7286466‑M1/29‑35 (MQ=255) acatcatacaccaaatgcaccagcctttTCAGCGt < 1:10092681‑M1/7‑1 (MQ=255) catcatacaccaaatgcaccagcctttTCAGCGTc > 1:7030355‑M1/28‑35 (MQ=255) catcatacaccaaatgcaccagcctttTCAGCGTc > 1:3731328‑M1/28‑35 (MQ=255) cAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTc > 1:2176234/1‑35 (MQ=255) cAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTc < 1:10339804/35‑1 (MQ=255) cAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTc < 1:2653047/35‑1 (MQ=255) cAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTc > 1:5600474/1‑35 (MQ=255) cAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTc < 1:17448844/35‑1 (MQ=255) atcatacaccaaatgcaccggcctttTCAGCGTcg > 1:163039‑M1/27‑35 (MQ=255) atcatacaccaaatgcaccagcctttTCAGCGTcg > 1:14885115‑M1/27‑35 (MQ=255) aaaTAAAAACGCGGGAAAAGCACTGGTCAGCGTcg < 1:13114319/35‑1 (MQ=255) aaaTAAAAACGCGGGAAAAGCACTGGTCAGCGTcg < 1:11226190/35‑1 (MQ=255) aaaTAAAAACGCGGGAAAAGCACTGGTCAGCGTcg < 1:5271978/35‑1 (MQ=255) aaaTAAAAACGCGGGAAAAGCACTGGTCAGCGTcg < 1:10143958/35‑1 (MQ=255) tcatacaccaaatgcaccagcctttTCAGCgtctg < 1:13382392‑M1/10‑3 (MQ=255) tcatacaccaaatgcaccagcctttTCAGCGTcgg < 1:16423013‑M1/10‑1 (MQ=255) aaTAAAAACGCGGGAAAAGCACTGGTCAGCGTcgg > 1:13264254/1‑35 (MQ=255) aaTAAAAACGCGGGAAAAGCACTGGTCAGCGTcgg < 1:19485758/35‑1 (MQ=255) aTAAAAACGCGGGAAAAGCACTGGTCAGCGTcggg > 1:12035878/1‑35 (MQ=255) aTAAAAACGCGGGAAAAGCACTGGTCAGCGTcggg > 1:15910464/1‑35 (MQ=255) tAAAAACGCGGGAAAAGCACTGGTCAGCGTcgggg < 1:11648226/35‑1 (MQ=255) tacaccaaatgcaccagcctttTCAGCGTcggggg < 1:7541054‑M1/13‑1 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggt > 1:2269612/1‑34 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggg < 1:8365631/35‑1 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggg > 1:14483045/1‑35 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggg > 1:4642502/1‑35 (MQ=255) acaccaaatgcaccagcctttTCAGCGtcgggggg < 1:15680245‑M1/14‑2 (MQ=255) aaaaCGCGGGAAAAGCACTGGTCAGCGTcgggggc > 1:10606831/1‑35 (MQ=255) accaaatgcaccagcctttTCAGcgtcgggggggg < 1:12582524‑M1/16‑4 (MQ=255) aaCGCGGGAAAAGCACTGGTCAGCGTcgggggcgg < 1:15475852/35‑1 (MQ=255) aaCGCGGGAAAAGCACTGGTCAGCGTcgggggcgg > 1:5020385/1‑35 (MQ=255) ccaaatgcaccagcctttTCAGCGTcggggggggg < 1:5101163‑M1/17‑1 (MQ=255) ccaaatgcaccagcctttTCAGCGTcggggggggg < 1:1078414‑M1/17‑1 (MQ=255) aCGCGGGAAAAGCACTGGTCAGCGTcgggggcggg > 1:3147209/1‑35 (MQ=255) aCGCGGGAAAAGCACTGGTCAGCGTcgggggcggg < 1:7654821/35‑1 (MQ=255) cgcgGGAAAAGCACTGGTCAGCGTcgggggcgggg < 1:19347200/35‑1 (MQ=255) cgcgGGAAAAGCACTGGTCAGCGTcgggggcgggg > 1:9266384/1‑35 (MQ=255) caaatgcaccagcctttTCAGCGTcgggggggggg < 1:8994798‑M1/18‑1 (MQ=255) caaatgcaccagcctttTCAGCGTcgggggggggg < 1:12209947‑M1/18‑1 (MQ=255) gcgGGAAAAGCACTGGTCAGCGTcgggggcggggg > 1:19770947/1‑35 (MQ=255) gcgGGAAAAGCACTGGTCAGCGTcgggggcggggg < 1:18372810/35‑1 (MQ=255) gcgGGAAAAGCACTGGTCAGCGTcgggggcggggg < 1:17996145/35‑1 (MQ=255) aaatgcaccagcctttTCAGCGTcggggggggggg < 1:6445589‑M1/19‑1 (MQ=255) cgGGAAAAGCACTGGTCAGCGTcgggggcgggggg > 1:5136936/1‑34 (MQ=255) aatgcaccagcctttTCAGCGtcgggggtgggggg < 1:13009705‑M1/20‑2 (MQ=255) aatgcaccagcctttTCAGCGtcgggggggggggg < 1:6320816‑M1/20‑2 (MQ=255) ggAAAAGCACTGGTCAGCGTCGGGGGCGGGGGtat < 1:3489578/35‑1 (MQ=255) gAAAAGCACTGGTCAGCGTCGGGGGCGGGGGtata < 1:19177848/35‑1 (MQ=255) gAAAAGCACTGGTCAGCGTCGGGGGCGGGGGtata < 1:2007744/35‑1 (MQ=255) aaaaGCACTGGTCAGCGTCGGGGGCGGGGGTATaa < 1:16690718/35‑1 (MQ=255) aaaGCACTGGTCAGCGTCGGGGGCGGGGGTATAAt > 1:6665616/1‑35 (MQ=255) aaaGCACTGGTCAGCGTCGGGGGCGGGGGGATAAt > 1:9166935/1‑35 (MQ=255) aaaGCACTGGTCAGCGTCGGGGGCGGGGGGATAAt > 1:7220166/1‑35 (MQ=255) aaGCACTGGTCAGCGTCGGGGGCGGGGGTATAATg < 1:8559725/35‑1 (MQ=255) aaGCACTGGTCAGCGTCGGGGGCGGGGGGATAATg > 1:20117531/1‑35 (MQ=255) aaGCACTGGTCAGCGTCGGGGGCGGGGGGATAATg > 1:8178857/1‑35 (MQ=255) aGCACTGGTCAGCGTCGGGGGCGGGGGTATAATGa < 1:6617072/35‑1 (MQ=255) aGCACTGGTCAGCGTCGGGGGCGGGGGGATAAAGa > 1:20581550/1‑35 (MQ=37) gCACTGGTCAGCGTCGGGGGCGGGGGTATAATGAc < 1:12684086/35‑1 (MQ=255) cACTGGTCAGCGTCGGGGGCGGGGGTATAATGAcc < 1:19552105/35‑1 (MQ=255) cACTGGTCAGCGTCGGGGGCGGGGGGATAATGAcc > 1:7816336/1‑35 (MQ=255) aCTGGTCAGCGTCGGGGGCGGGGGTATAATGACCa < 1:19838666/35‑1 (MQ=255) aCTGGTCAGCGTCGGGGGCGGGGGTATAATGACCa < 1:17393285/35‑1 (MQ=255) cTGGTCAGCGTCGGGGGCGGGGGTATAATGACCAt < 1:15799598/35‑1 (MQ=255) cTGGTCAGCGTCGGGGGCGGGGGTATAATGACCAt < 1:3566892/35‑1 (MQ=255) cTGGTCAGCGTCGGGGGCGGGGGTATAATGAACAt < 1:1026223/35‑1 (MQ=255) ggTCAGCGTCGGGGGCGGGGGGATAATTACCAttt > 1:19236985/1‑34 (MQ=37) | CATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGCGGGGGTATAATGACCATTC > REL606/1306292‑1306358 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |