Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 2,122,426 | IS150 (–) +3 bp | 46.2% | coding (198‑200/216 nt) | ECB_02013 ← | conserved hypothetical protein; putative exported protein |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2122426 = | 47 (0.520) | 48 (0.470) | 32/48 | NT | 47.2% | coding (200/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein |
? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 2122428 | 46 (0.540) | 32 (0.320) | 21/46 | NT | 37.7% | coding (198/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein |
? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
TACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2122395‑2122428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACA > REL606/2774435‑2774467 tcCCGTTGAAAGCCCCTACTGGTGACACCCTAAAT < 1:9507600/33‑1 tcCCGTTGAAAGCCCCTACTGGTGACACCCTAAAT < 1:19995641/33‑1 TACCGTTGAAAGCCCCTACTGGTGACACCCTAAAT < 1:17312213/35‑1 TACCGTTGAAAGCCCCTACTGGTGACACCCTAAAT > 1:9387831/1‑35 TACCGTTGAAAGCCCCTACTGGTGACACCCTAAAT > 1:18472899/1‑35 TACCGTTGAAAGCCCCTACTGGTGACACCCTAAAT < 1:8103723/35‑1 TACCGTTGAAAGCCCCTACTGGTGACACCCTAAAT > 1:13277831/1‑35 TACCGTTGAAAGCCCCTACTGGTGACACCCTAAAT > 1:7500808/1‑35 cCCGTTGAAAGCCCCTACTGGTGACACCCTAAATG < 1:15028509/34‑1 ACCGTTGAAAGCCCCTACTGGTGACACCCTAAATG < 1:9975066/35‑1 CCGTTGAAAGCCCCTACTGGTGACACCCTAAATGT > 1:12694619/1‑35 GTTGAAAGCCCCTACTGGTGACACCCTAAATGTAC > 1:15149091/1‑35 GTTGAAAGCCCCTACTGGTGACACCATAAATGTAC < 1:18277533/35‑1 TTGAAAGCCCCTACTGGTGACACCCTAAATGTACT > 1:20558175/1‑35 TTGAAAGCCCCTACTGGTGACACCCTAAATGTACT > 1:12154164/1‑35 TTGAAAGCCCCTACTGGTGACACCCTAAATGTACT < 1:1545056/35‑1 GAAAGCCCCTACTGGTGACACCCTAAATGTACTGA > 1:14050109/1‑35 AGCCCCTACTGGTGACACCCTAAATGTACTGACCC > 1:7064142/1‑35 AGCCCCTACTGGTGACACCCTAAATGTACTGACCC < 1:19221172/35‑1 AGCCCCTACTGGTGACACCCTAAATGTACTGACCC > 1:8207424/1‑35 CCCCTACTGGTGACACCCTAAATGTACTGACCCCA < 1:19741801/35‑1 aCTACTGGTGACACCCTAAATGTACTGACCCCAAA < 1:17889360/34‑1 CCTACTGGTGACACCCTAAATGTACTGACCCCAAA < 1:3479966/35‑1 CCTACTGGTGACACCCTAAATGTACTGACCCCAAA < 1:19378091/35‑1 CCTACTGGTGACACCCTAAATGTACTGACCCCAAA < 1:4694058/35‑1 CCTACTGGTGACACCCTAAATGTACTGACCCCAAA > 1:4948223/1‑35 CCTACTGGTGACACCCTAAATGTACTGACCCCAAA < 1:20561023/35‑1 CTACTGGTGACACCCTAAATGTACTGACCCTAAAA > 1:15794769/1‑35 ACTGGTGACACCCTAAATGTACTGACCCCAAAAAG > 1:6713694/1‑35 CTGGTGACACCCTAAATGTACTGACCCCAAAAAGT > 1:11143083/1‑35 TGGTGACACCCTAAATGTACTGACCCCAAAAAGTT > 1:17765434/1‑35 GGTGACACCCTAAATGTACTGACCCCAAAAAGTTG > 1:241520/1‑35 GGTGACACCCTAAATGTACTGACCCCAAAAAGTTG < 1:12556894/35‑1 GTGACACCCTAAATGTACTGACCCCAAAAAGTTGG < 1:389708/35‑1 GTGACACCCTAAATGTACTGACCACAAAAAGTTGG < 1:16544345/35‑1 TGACACCCTAAATGTACTGACCCCAAAAAGTTGGA > 1:13594725/1‑35 TGACACCCTAAATGTACTGACCCCAAAAAGTTGGA > 1:8710390/1‑35 TGACACCCTAAATGTACTGACCCCAAAAAGTTGGA < 1:15589683/35‑1 TGACACCCTAAATGTACTGACCCCAAAAAGTTGGA < 1:8969995/35‑1 GACACCCTAAATGTACTGACCCCAAAAAGTTGGAC > 1:10864864/1‑35 CACCCTAAATGTACTGACCCCAAAAAGTTGGACAG < 1:16988363/35‑1 CACCCTAAATGTACTGACCCCAAAAAGTTGGACAG < 1:14295870/35‑1 CACCCTAAATGTACTGACCCCAAAAAGTTGGACAG > 1:14689775/1‑35 CCCTAAATGTACTTACCCCAAAAAGTTGGACAGTT > 1:6307404/1‑35 CCTAAATGTACTGACCCCAAAAAGTTGGACAGTTA > 1:15802065/1‑35 CCTAAATGTACTGACCCCAAAAAGTTGGACAGTTA < 1:19990330/35‑1 CCTAAATGTACTGACCCCAAAAAGTTGGACAGTTA > 1:5883167/1‑35 CCTAAATGTACTGACCCCAAAAAGTTGGACAGTTA > 1:6963453/1‑35 CTAAATGTACTGACCCCAAAAAGTTGGACAGTTAA < 1:3135134/35‑1 AAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:20195628/35‑1 AAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:11986961/35‑1 AAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC > 1:9052099/1‑35 AAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:1194522/35‑1 AAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC > 1:17810003/1‑35 AATGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:5679141/35‑1 AATGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:15384473/1‑35 AATGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:5600573/35‑1 AATGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:2139721/35‑1 AATGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:9651310/35‑1 TACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2122395‑2122428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACA > REL606/2774435‑2774467 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |