New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 924276 = | 93 (0.910) | 10 (0.100) | 3/46 | NT | 12.3% | coding (714/1431 nt) | ybjT | conserved protein with NAD(P)‑binding Rossmann‑fold domain |
? | REL606 | = 1365457 | 53 (0.540) | coding (824/978 nt) | pspF | DNA‑binding transcriptional activator |
Only 100 of 112 total aligned reads displayed.
CTGCTGCATCTGAAACTCACGTAAATCCAGCGGCAGTGTTGGAAGCGAGGTGGTTTCTGAAACGGCGAT > REL606/1365423‑1365491 | ctgctgCATCTGAAACTCACGTAAATCCAGCTGCa > 1:10953447/1‑35 (MQ=255) ctgctgCATCTGAAACTCACGTAAATCCAGCGGCa > 1:16711157/1‑35 (MQ=255) ctgctgCATCTGAAACTCACGTAAATCCAGCGGCa < 1:17982616/35‑1 (MQ=255) ctgctgCATCTGAAACTCACGTAAATCCAGCGGCa > 1:3957221/1‑35 (MQ=255) ctgctgCATCTGAAACTCACGTAAATCCAGCGGCa > 1:18649170/1‑35 (MQ=255) tgctgcATCTGAAACTCACGTAAATCCAGCGGCAg > 1:14795874‑M2/1‑34 (MQ=255) tgctgcATCTGAAACTCACGTAAATCCAGCGGCAg > 1:6517882‑M2/1‑34 (MQ=255) tgctgcATCTGAAACTCACGTAAATCCAGCGGCAg > 1:2105873‑M2/1‑34 (MQ=255) tgctgcATCTGAAACTCACGTAAATCCAGCGGCAg > 1:11181858‑M2/1‑34 (MQ=255) tgctgcATCTGAAACTCACGTAAATCAAGCGGCAg > 1:17865781‑M2/1‑34 (MQ=255) gctgcATCTGAAACTCACGTAAATCCAGCGGCAgt < 1:16463003/35‑1 (MQ=255) gctgcATCTGAAACTCACGTAAATCCAGCGGCAgg < 1:10567469‑M2/35‑3 (MQ=255) gctgcATCTGAAACTCACGTAAATCCAGCGGCAgg < 1:16704328‑M2/35‑3 (MQ=255) ntgcATCTGAAACTCACGTAAATCCAGCGGCAggg < 1:5885744‑M2/35‑4 (MQ=255) ctgcATCTGAAACTCACGTAAATCCAGCGGCAgtg < 1:9316349/35‑1 (MQ=255) ctgcATCTGAAACTCACGTAAATCCAGCGGCAggg < 1:4242041‑M2/35‑4 (MQ=255) tgcATCTGAAACTCACGTAAATCCAGCGGCGgggg < 1:1329955‑M2/35‑5 (MQ=255) tgcATCTGAAACTCACGTAAATCCAGCGGCAgtgt < 1:2031501/35‑1 (MQ=255) tgcATCTGAAACTCACGTAAATCCAGCGGCAgtgt < 1:13130502/35‑1 (MQ=255) tacatCTGAAACTCACGTAAATCCAGCGGCAgggg < 1:4813469‑M2/33‑5 (MQ=255) gcATCTGAAACTCACGTAAATCCAGCGGCAggggg < 1:4379610‑M2/35‑6 (MQ=255) gcATCTGAAACTCACGTAAATCCAGCGGCAggggg < 1:6607796‑M2/35‑6 (MQ=255) gcATCTGAAACTCACGTAAATCCAGCGGCAggggg < 1:2511394‑M2/35‑6 (MQ=255) gcATCTGAAACTCACGTAAATCCAGCGGCAGTGtt < 1:19156905/35‑1 (MQ=255) cATCTGAAACTCACGTAAATCCAGCGGCAgggggg < 1:8147442‑M2/35‑7 (MQ=255) cATCTGAAACTCACGTAAATCCAGCGGCAGTGTTg < 1:15942738/35‑1 (MQ=255) aTCTGAAACTCACGTAAATCCAGCGGCAgggggtg < 1:14353894‑M2/35‑8 (MQ=255) aTCTGAAACTCACGTAAATCCAGCGGCAggggggg < 1:2650634‑M2/35‑8 (MQ=255) aTCTGAAACTCACGTAAATCCAGCGGCAggggggg < 1:3821133‑M2/35‑8 (MQ=255) aTCTGAAACTCACGTAAATCCAGCGGCAggggggg < 1:14119579‑M2/35‑8 (MQ=255) aTCTGAAACTCACGTAAATCCAGCGGCAGTGTTgg < 1:575553/35‑1 (MQ=255) aTCTGAAACTCACGTAAATCCAGCGGCAGTGTTgg < 1:3974226/35‑1 (MQ=255) aTCTGAAACTCACGTAAATCCAGCGGCAGTGTTgg < 1:3923417/35‑1 (MQ=255) tCTGAAACTCACGTAAATCCAGCGGCAggggtggg < 1:16147306‑M2/35‑9 (MQ=255) tCTGAAACTCACGTAAATCCAGCGGCAgggggggg < 1:4453917‑M2/35‑9 (MQ=255) tCTGAAACTCACGTAAATCCAGCGGCAgggggggg < 1:13058951‑M2/35‑9 (MQ=255) tCTGAAACTCACGTAAATCCAGCGGCAgggggggg < 1:11728680‑M2/35‑9 (MQ=255) tCTGAAACTCACGTAAATCCAGCGGCAgggggggg < 1:19073614‑M2/35‑9 (MQ=255) tCTGAAACTCACGTAAATCCAGCGGCAGTGTTGGa < 1:4403710/35‑1 (MQ=255) tCTGAAACTCACGTAAATCCAGCGGCAGTGTTGGa < 1:16429053/35‑1 (MQ=255) tCTGAAACTCACGTAAATCCAGCGGCAGTGTTGGa < 1:3465058/35‑1 (MQ=255) cTGAAACTCACGTAAATCCAGCGGCAggggggggg < 1:1292494‑M2/35‑10 (MQ=255) cTGAAACTCACGTAAATCCAGCGGCAggggggggg < 1:14561847‑M2/35‑10 (MQ=255) cTGAAACTCACGTAAATCCAGCGGCAGTGTTGGaa < 1:17722986/35‑1 (MQ=255) cTGAAACTCACGTAAATCCAGCGGCAGTGTTGGaa < 1:17118147/35‑1 (MQ=255) tGAAACTCACGTAAATCCAGCGGCAggggtggggg < 1:5440217‑M2/35‑11 (MQ=255) tGAAACTCACGTAAATCCAGCGGCAgggggggggg < 1:13459544‑M2/35‑11 (MQ=255) tGAAACTCACGTAAATCCAGCGGCAgggggggggg < 1:6868658‑M2/35‑11 (MQ=255) tGAAACTCACGTAAATCCAGCGGCAGTGTTGGAAg < 1:5202757/35‑1 (MQ=255) tGAAACTCACGTAAATCCAGCGGCAGTGTTGGAAg < 1:4561933/35‑1 (MQ=255) tGAAACTCACGTAAATCCAGCGGCAGTGTTGGAAg < 1:9463025/35‑1 (MQ=255) agAAACTCACGTAAATCCAGCGGCAGTGTTGGAAg < 1:4942689/34‑1 (MQ=255) gAAACTCACGTAAATCCAGCGGCAGTGTTGGAAGc < 1:14504728/35‑1 (MQ=255) aaaCTCACGTAAATCCAGCGGCAGTGTTGGAAGCg < 1:7141725/35‑1 (MQ=255) aaaCTCACGTAAATCCAGCGGCAGTGTTGGAAGCg < 1:5347852/35‑1 (MQ=255) aaCTCACGTAAATCCAGCGGCAGTGTTGGAAGCGa < 1:12025390/35‑1 (MQ=255) aCTCACGTAAATCCAGCGGCAGTGTTGGAAGCGAg < 1:5389625/35‑1 (MQ=255) aCTAACGTAAATCCAGCGGCAGTGTTGGAAGCGAg < 1:9023039/35‑1 (MQ=255) cTCACGTAAATCCAGCGGCAGTGTTGGAAGCGAgg < 1:19648203/35‑1 (MQ=255) cTCACGTAAATCCAGCGGCAGTGTTGGAAGCGAgg < 1:12817871/35‑1 (MQ=255) cTCACGTAAATCCAGCGGCAGTGTTGGAAGCGAgg < 1:18461786/35‑1 (MQ=255) cTCACGTAAATCCAGCGGCAGTGTTGGAAGCGAgg < 1:17054807/35‑1 (MQ=255) tCACGTAAATCCAGCGGCAGTGTTGGAAGCGAggt < 1:6218949/35‑1 (MQ=255) tCACGTAAATCCAGCGGCAGTGTTGGAAGCGAggt < 1:16926556/35‑1 (MQ=255) tCACGTAAATCCAGCGGCAGTGTTGGAAGCGAggt < 1:14581983/35‑1 (MQ=255) cACGTAAATCCAGCGGCAGTGTTGGAAGCGAggtg < 1:10804888/35‑1 (MQ=255) aCGTAAATCCAGCGGCAGTGTTGGAAGCGAggtgg < 1:10151806/35‑1 (MQ=255) cGTAAATCCAGCGGCAGTGTTGGAAGCGAggtggt < 1:9689722/35‑1 (MQ=255) gTAAATCCAGCGGCAGTGTTGGAAGCGAGGTGGtt < 1:9731840/35‑1 (MQ=255) tAAATCCAGCGGCAGTGTTGGAAGCGAGGTGGttt < 1:12978929/35‑1 (MQ=255) tAAATCAAGCGGCAGTGTTGGAAGCGAGGTGGttt < 1:12065886/35‑1 (MQ=255) tAAATACAGCGGCAGTGTTGGAAGCGAGGTGGttt < 1:18631786/35‑1 (MQ=255) aaaTCCAGCGGCAGTGTTGGAAGCGAGGTGGTTTc < 1:2792865/35‑1 (MQ=255) aTCCAGCGGCAGTGTTGGAAGCGAGGTGGTTTCTg < 1:5377141/35‑1 (MQ=255) tCCAGCGGCAGTGTTGGAAGCGAGGTGGTTTCTGa < 1:4320205/35‑1 (MQ=255) tCCAGCGGCAGTGTTGGAAGCGAGGTGGTTTCTGa < 1:18602003/35‑1 (MQ=255) tCCAGCGGCAGTGTTGGAAGCGAGGTGGTTTCTGa < 1:14122575/35‑1 (MQ=255) ccAGCGGCAGTGTTGGAAGCGAGGTGGTTTCTGaa < 1:5146874/35‑1 (MQ=255) tctggCAGTGTTGGAAGCGAGGTGGTTTCTGAAAc < 1:2251242/32‑1 (MQ=255) aGCGGCAGTGTTGGAAGCGAGGTGGTTTCTGAAAc < 1:19490334/35‑1 (MQ=255) aGCGGCAGTGTTGGAAGCGAGGTGGTTTCTGAAAc < 1:18623778/35‑1 (MQ=255) aGCGGCAGTGTTGGAAGCGAGGTGGTTTCTGAAAc < 1:17033730/35‑1 (MQ=255) gCGGCAGTGTTGGAAGCGAGGTGGTTTCTGAAACg < 1:5540149/35‑1 (MQ=255) gCGGCAGTGTTGGAAGCGAGGTGGTTTCTGAAACg < 1:27738/35‑1 (MQ=255) gCGGCAGTGTTGGAAGCGAGGTGGTTTCTGAAACg < 1:14090946/35‑1 (MQ=255) cGGCAGTGTTGGAAGCGAGGTGGTTTCTGAAACgg < 1:4558061/35‑1 (MQ=255) cGGCAGTGTTGGAAGCGAGGTGGTTTCTGAAACgg < 1:36563/35‑1 (MQ=255) cGGCAGTGTTGGAAGCGAGGTGGTTTCTGAAACgg < 1:13053265/35‑1 (MQ=255) cGGCAGTGTTGGAAGCGAGGTGGTTTCTGAAACgg < 1:9526651/35‑1 (MQ=255) ggCAGTGTTGTAAGCGAGGTGGTTTCTGAAACGGc < 1:963051/35‑1 (MQ=255) ggCAGTGTTGGAAGCGAGGTGGTTTCTGAAACGGc < 1:19355155/35‑1 (MQ=255) gCAGTGTTGGAAGCGAGGTGGTTTCTGAAACGGCg < 1:10065101/35‑1 (MQ=255) gCAGTGTTGGAAGCGAGGTGGTTTCTGAAACGGCg < 1:1731037/35‑1 (MQ=255) gCAGTGTTGGAAGCGAGGTGGGTTCTGAAAAgggg > 1:15883003/1‑33 (MQ=37) cAGTGTTGGAAGCGAGGTGGTTTCTGAAACGGCGa < 1:3395108/35‑1 (MQ=255) cAGTGTTGGAAGCGAGGTGGGTTTTGAAAAggggg > 1:6788742/1‑32 (MQ=19) aGTGTTGGAAGCGAGGTGGTTTCTGAAACGGCGaa > 1:7753131/1‑34 (MQ=255) aGTGTTGGAAGCGAGGTGGTTTCTGAAACGGCGaa > 1:6627758/1‑34 (MQ=255) aGTGTTGGAAGCGAGGTGGTTTCTGAAACGGCGAt < 1:15861831/35‑1 (MQ=255) aGTGTTGGAAGCGAGGTGGTTTCTGAAACGGCGAt < 1:17506118/35‑1 (MQ=255) | CTGCTGCATCTGAAACTCACGTAAATCCAGCGGCAGTGTTGGAAGCGAGGTGGTTTCTGAAACGGCGAT > REL606/1365423‑1365491 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |