Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 1,462,320 | IS150 (–) +3 bp | 90.4% | intergenic (‑82/‑257) | mokB ← / → trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 664688 = | NA (NA) | 66 (0.700) | 36/44 | NT | 89.1% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 1462320 = | 7 (0.090) | intergenic (‑82/‑259) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor | |||||
* | ? | REL606 | = 666130 | NA (NA) | 66 (0.640) | 36/48 | NT | 89.2% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 1462322 | 7 (0.080) | intergenic (‑84/‑257) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
Only 100 of 136 total aligned reads displayed.
CCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/664721‑664688 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGG > REL606/1462320‑1462353 CCATTTCATCGTCCAACAAAATTGGTGCAGTACAG > 1:7202488/1‑35 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG < 1:10345599/35‑1 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG < 1:15826815/35‑1 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG < 1:697681/35‑1 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG < 1:584777/35‑1 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG > 1:11435258/1‑35 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG < 1:11611526/35‑1 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG > 1:11807593/1‑35 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG > 1:19122176/1‑35 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG > 1:17802488/1‑35 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG < 1:17591989/35‑1 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG > 1:1716695/1‑35 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG > 1:4032766/1‑35 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAG > 1:12580894/1‑35 CATTTCATCGTCCAACAAAATGTGTGCAGTACAGG > 1:8505407/1‑35 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGG < 1:14294085/35‑1 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGG > 1:2086510/1‑35 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGG > 1:19692104/1‑35 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGG < 1:15756270/35‑1 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGG < 1:14739516/35‑1 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGG > 1:19822180/1‑35 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGG < 1:14072504/35‑1 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGG > 1:12543300/1‑35 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGG > 1:5148817/1‑35 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGG < 1:5199880/35‑1 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGG > 1:8787141/1‑35 ATTTCATCGTCCAACAAAATGGGTGCAGTACAGcg < 1:18042226/35‑3 ATTTCATCGTCCAACAAAATGGGTGCAGTACAGcg > 1:16253565/1‑33 ATTTCATCGTCCAACAAAATGGGTGCAGTACAGGC > 1:14497324/1‑35 ATTTCATCGTCCAACAAAATGGGTGCAGTACAGGC > 1:526751/1‑35 TTTCATAGTCCAACAAAATGGGTGCAGTACAGGCA < 1:13543637/35‑1 TTCATCGTCCAACAAAATGGGTGCAGTACAGGCAC > 1:1787087/1‑35 TTCATCGTCCAACAAAATGGGTGCAGTACAGGCAC < 1:2198984/35‑1 TCATCGTCCAACAAAATGGGTGCAGTACAGGCACC > 1:4712710/1‑35 CATCGTCCAACAAAATGGGTGCAGTACAGGCACCC < 1:2525105/35‑1 CATCGTCCAACAAAATGGGTGCAGTACAGGCACCC < 1:9957537/35‑1 ATCGTCGAACAAAATGGGTGCAGTACAGGCACCCG < 1:14604274/35‑1 ATCGTCCAACAAAATGGGTGCAGTACAGGCACCCG > 1:19097388/1‑35 ATCGTCCAACAAAATGGGTGCAGTACAGGCACCCG < 1:15268143/35‑1 TCGTCCAACAAAATGGGTGCAGTACAGGCACCCGC > 1:17584995/1‑35 TCGTCCAACAAAATGGGTGCAGTACAGGCACCCGC > 1:1237689/1‑35 CGTCCAACAAAATGGGTGCAGTACAGGCACCCGCA < 1:5047936/35‑1 GTCCAACAAAATGGGTGCAGTACAGGCACCCGCAG > 1:12669882/1‑35 GTCCAACAAAATGGGTGCAGTACAGGCACCCGCAG > 1:13022892/1‑35 GTCCAACAAAATGGGTGCAGTACAGGCACCCGCAG > 1:8001610/1‑35 TCCAACAAAATGGGTGCAGTACAGGCACCCGCAGG < 1:6595068/35‑1 TCCAACAAAATGGGTGCAGTACAGGCACCCGCAGG < 1:3150201/35‑1 TCCAACAAAATGGGTGCAGTACAGGCACCCGCAGG > 1:15240031/1‑35 TCCAACAAAATGGGTGCAGTACAGGCACCCGCAGG < 1:3557805/35‑1 CCAACAAAATGGGTGCAGTACAGGCACCCGCAGGC > 1:11395936/1‑35 CAACAAAATGGGTGCAGTACAGGCACCCGCAGGCA > 1:16083710/1‑35 CAACAAAATGGGTGCAGTACAGGCACCCGCAGGCA > 1:17387310/1‑35 CAACAAAATGGGTGCAGTACAGGCACCCGCAGGCA > 1:7058757/1‑35 CAACAAAATGGGTGCAGTACAGGCACCCGCAGGCA < 1:1502576/35‑1 AACAAAATGGGTGCAGTACAGGCACCCGCAGGCAT < 1:3311998/35‑1 ACAAAATGGGTGCAGTACAGGCACCCGCAGGCATC < 1:2629097/35‑1 ACAAAATGGGTGCAGTACAGGCACCCGCAGGCATC < 1:3568065/35‑1 ACAAAATGGGTGCAGTACAGGCACCCGCAGGCATC > 1:17567007/1‑35 ACAAAATGGGTGCAGTACAGGCACCCGCAGGCATC > 1:913197/1‑35 ACAAAATGGGTGCAGTACAGGCACCAGCAGGCATC < 1:20131869/35‑1 CAAAATGGGTGCAGTACAGGCACCCGCAGGCATCC < 1:11239397/35‑1 CAAAATGGGTGCAGTACAGGCACCCGCAGGCATCC < 1:6104209/35‑1 AAAATGGGTGCAGTACAGGCACCCGCAGGCATCCT < 1:4229211/35‑1 AAAATGGGTGCAGTACAGGCACCCGCAGGCATCCT < 1:5971943/35‑1 AAAATGGGTGCAGTACAGGCACCCGCAGGCATCCT < 1:7394245/35‑1 AAAATGGGTGCAGTACAGGCACCCGCAGGCATCCT > 1:9805231/1‑35 AAAATGGGTGCAGTACAGGCACCCGCAGGCATCCT > 1:11882041/1‑35 AAATGGGTGCAGTACAGGCACCCGCAGGCATCCTA > 1:19705244/1‑35 AAATGGGTGCAGTACAGGCACCCGCAGGCATCCTA > 1:7459830/1‑35 ATGGGTGCAGTACAGGCACCCGCATGCATCCTATG > 1:16172177/1‑35 TGGGTGCAGTACAGGCACCCGCAGGCATCCTATGA < 1:11041915/35‑1 GGGTGCAGTACAGGCACCCGCAGGCATCCTATGAG > 1:4712252/1‑35 GGGTGCAGTACAGGCACCCGCAGGCATCCTATGAG > 1:14858471/1‑35 GGGTGCAGTACAGGCACCCGCAGGCATCCTATGAG > 1:18638296/1‑35 GGTGCAGTACAGGCACCCGCAGGCATCCTATGAGG < 1:10038697/35‑1 GGTGCAGTACAGGCACCCGCAGGCATCCTATGAGG > 1:3040985/1‑35 GTGCAGTACAGGCACCCGCAGGCATCCTATGCGGT < 1:5073581/35‑1 GTGCAGTACAGGCACCCGCAGGCATCCTATGAGGT < 1:16600723/35‑1 GTGCAGTACAGGCACCCGCAGGCATCCTATGAGGT > 1:16179427/1‑35 TGCAGTACAGGCACCCGCAGGCATCCTATGAGGTT > 1:9208401/1‑35 TGCAGTACAGGCACCCGCAGGCATCCTATGAGGTT > 1:7737440/1‑35 GCAGTACAGGCACCCGCAGGCATCCTATGAGGTTT > 1:5823123/1‑35 GCAGTACAGGCACCCGCAGGCATCCTATGAGGTTT < 1:2728830/35‑1 GCAGTACAGGCACCCGCAGGCATCCTATGAGGTTT < 1:12917040/35‑1 AGTACAGGCACCCGCAGGCATCCTATGAGGTTTCC > 1:19685279/1‑35 AGTACAGGCACCCGCAGGCATCCTATGAGGTTTCC > 1:12093406/1‑35 GTACAGGCCCCCGCAGGCATCCTATGAGGTTTCCT < 1:8354529/35‑1 TACAGGCACCCGCAGGCATCCTATGAGGTTTCCTT > 1:1935356/1‑35 TACAGGCACCCGCAGGCATCCTATGAGGTTTCCTT < 1:15255429/35‑1 TACAGGCACCCGCAGGCATCCTATGAGGTTTCCTT > 1:8197414/1‑35 TACAGGCACCCGCAGGCATCCTATGAGGTTTCCTT < 1:10430288/35‑1 TACAGGCACCCGCAGGCATCCTATGAGGTTTCCTT < 1:6308772/35‑1 TACAGGCACCAGCAGGCATCCTATGAGGTTTCCTT < 1:10907038/35‑1 TACAGGCACACGCAGGCATCCTATGAGGTTTCCTT < 1:18596494/35‑1 ACAGGCACCCGCAGGCATCCTATGAGGTTTGCTTA > 1:2466412/1‑35 ACAGGCACCCGCAGGCATCCTATGAGGTTTCCTTA > 1:6978422/1‑35 ACAGGCACCCGCAGGCATCCTATGAGGTTTCCTTA < 1:11901819/35‑1 ACAGGCACCCGCAGGCATCCTATGAGGTTTCATTA < 1:15796537/35‑1 CAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAG < 1:17001939/35‑1 AGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGG < 1:14358239/35‑1 CCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/664721‑664688 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGG > REL606/1462320‑1462353 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |