New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 212468 = | 63 (0.610) | 18 (0.200) | 5/42 | NT | 18.6% | intergenic (+46/‑53) | accA/ldcC | acetyl‑CoA carboxylase subunit alpha/lysine decarboxylase 2, constitutive |
? | REL606 | 235476 = | 117 (1.140) | intergenic (+3/+45) | yafE/mltD | predicted S‑adenosyl‑L‑methionine‑dependent methyltransferase/predicted membrane‑bound lytic murein transglycosylase D |
Only 100 of 185 total aligned reads displayed.
TCATCATGGTAGAAGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATT > REL606/235442‑235510 | tcatcaTGGTAGAAGCACATAAAGCGGCatatata < 1:4092784/35‑1 (MQ=255) tcatcaTGGTAGAAGCACATAAAGCGGCataaata < 1:14526341/35‑1 (MQ=255) tcatcaTGGTAGAAGCACATAAAGCGGCataaata < 1:2306976/35‑1 (MQ=255) tcatcaTGGTAGAAGCACATAAAGCGGCataaata > 1:9146875/1‑35 (MQ=255) catcatGGTAGAAGCACATAAAGCGGCataaataa > 1:17425385/1‑35 (MQ=255) ttaatcatagcctgctcaaaccgtggcgaaaaaaa > 1:16424864‑M2/33‑35 (MQ=255) atcatGGTAGAAGCACATAAAGCGGCAtaaataaa > 1:12900165/1‑35 (MQ=255) atcatGGTAGAAGCACATAAAGCGGCAtaaataaa < 1:5306930/35‑1 (MQ=255) tcatGGTAGAAGCACATAAAGCGGCATAAATaaaa < 1:11008572/35‑1 (MQ=255) tcatGGTAGAAGCACATAAAGCGGCATAAATaaaa > 1:12547740/1‑35 (MQ=255) tcatGGTAGAAGCACATAAAGCGGCATAAATaaaa > 1:5187311/1‑35 (MQ=255) tcatGGTAGAAGCACATAAAGCGGCATAAATaaaa < 1:6739762/35‑1 (MQ=255) tcatGGTAGAAGCACATAAAGCGGCATAAATaaaa < 1:11231887/35‑1 (MQ=255) taatcatagcctgctcaaaccgtggcgaaaaaaaa > 1:7156247‑M2/32‑35 (MQ=255) atcatagcctgctcaaaccgtggcgaaaaaaaaag > 1:17214101‑M2/30‑34 (MQ=255) atcatagcctgctcaaaccgtggcgaaaaaaaaag > 1:15146903‑M2/30‑34 (MQ=255) atcatagcctgctcaaaccgtggcgaaaaaaaaaa > 1:6242567‑M2/30‑35 (MQ=255) atGGTAGAAGCACATAAAGCGGCATAAATaaaaaa > 1:4412008/1‑35 (MQ=255) tcatagcctgctcaaaccgtggcgaaaaAAAAAAg > 1:20437696‑M2/29‑35 (MQ=255) tGGTAGAAGCACATAAAGCGGCATAAATAAAAAAg > 1:695320/1‑35 (MQ=255) tGGTAGAAGCACATAAAGCGGCATAAATAAAAAAg < 1:7097987/35‑1 (MQ=255) ggTAGAAGCACATAAAGCGGCATAAATAAAAAAgg > 1:15960139/1‑35 (MQ=255) ggTAGAAGCACATAAAGCGGCATAAATAAAAAAgg > 1:17704013/1‑35 (MQ=255) ggTAGAAGCACATAAAGCGGCATAAATAAAAAAgg < 1:19897637/35‑1 (MQ=255) ggTAGAAGCACATAAAGCGGCATAAATAAAAAAgg < 1:2157378/35‑1 (MQ=255) ggTAGAAGCACATAAAGCGGCATAAATAAAAAAgg > 1:3761145/1‑35 (MQ=255) catagcctgctcaaaccgtggcgataaAAAAAagc > 1:2965927‑M2/28‑34 (MQ=255) catagcctgctcaaaccgtggcgaaaaAAAAAaga > 1:4182871‑M2/28‑34 (MQ=255) gaaGAAGCACATAAAGCGGCATAAATAAAAAAGGc > 1:15740441/3‑35 (MQ=255) gTAGAAGCACATAAAGCGGCATAAATAAAAAAGGc < 1:20572789/35‑1 (MQ=255) gTAGAAGCACATAAAGCGGCATAAATAAAAAAGGc < 1:10137535/35‑1 (MQ=255) atagcctgctcaaaccgtggcgaaaaAAAAaagcc > 1:19096698‑M2/27‑33 (MQ=255) atagcctgctcaaaccgtggcgaaaaAAAAaagac > 1:1441282‑M2/27‑33 (MQ=255) tagcctgctcaaaccgtggcgaaaaAAAAAAGgcc > 1:9862902‑M2/26‑34 (MQ=255) tAGAAGCACATAAAGCGGCATAAATAAAAAAGGCa > 1:19189214/1‑35 (MQ=255) tAGAAGCACATAAAGCGGCATAAATAAAAAAGGCa > 1:15012360/1‑35 (MQ=255) tAGAAGCACATAAAGCGGCATAAATAAAAAAGGCa > 1:8377468/1‑35 (MQ=255) aGAAGCACATAAAGCGGCATAAATAAAAAAGGCAc < 1:12766806/35‑1 (MQ=255) aGAAGCACATAAAGCGGCATAAATAAAAAAGGCAc > 1:8190373/1‑35 (MQ=255) aGAAGCACATAAAGCGGCATAAATAAAAAAGGCAc > 1:11721464/1‑35 (MQ=255) gcctgctcaaaccgtggcgaaaaAAAAAAGgcaac > 1:11531287‑M2/24‑33 (MQ=255) gAAGCACATAAAGCGGCATAAATAAAAAAGGCAcc > 1:19245300/1‑35 (MQ=255) gAAGCACATAAAGCGGCATAAATAAAAAAGGCAcc > 1:4374945/1‑35 (MQ=255) gAAGCACATAAAGCGGCATAAATAAAAAAGGCAcc < 1:17570842/35‑1 (MQ=255) gAAGCACATAAAGCGGCATAAATAAAAAAGGCAcc < 1:14225798/35‑1 (MQ=255) cctgctcaaaccgtggcgaaaaAAAAAAGCCaccc > 1:7447684‑M2/23‑34 (MQ=255) aaGCACATAAAGCGGCATAAATAAAAAAGGCACCg > 1:19959818/1‑35 (MQ=255) aaGCACATAAAGCGGCATAAATAAAAAAGGCACCg > 1:5291258/1‑35 (MQ=255) aaGCACATAAAGCGGCATAAATAAAAAAGGCACCg > 1:9740459/1‑35 (MQ=255) aaGCACATAAAGCGGCATAAATAAAAAAGGCACCg < 1:12829406/35‑1 (MQ=255) aGCACATAAAGCGGCATAAATAAAAAAGGCACCgg < 1:8715573/35‑1 (MQ=255) aGCACATAAAGCGGCATAAATAAAAAAGGCACCgg < 1:14639384/35‑1 (MQ=255) tgctcaaaccgtggcgaaaaAAAAAAGGCAccgca > 1:5983103‑M2/21‑33 (MQ=255) gCACATAAAGCGGCATAAATAAAAAAGGCACCggg > 1:4658798/1‑35 (MQ=255) gCACATAAAGCGGCATAAATAAAAAAGGCACCggg > 1:4131885/1‑35 (MQ=255) gCACATAAAGCGGCATAAATAAAAAAGGCACCggg < 1:1649264/35‑1 (MQ=255) cacaTAAAGCGGCATAAATAAAAAAGGCACCgggg < 1:19776419/35‑1 (MQ=255) cacaTAAAGCGGCATAAATAAAAAAGGCACCgggg < 1:3415288/35‑1 (MQ=255) acaTAAAGCGGCATAAATAAAAAAGGCACCggggg > 1:344667/1‑35 (MQ=255) acaTAAAGCGGCATAAATAAAAAAGGCACCggggg > 1:10257452/1‑35 (MQ=255) caTAAAGCGGCATAAATAAAAAAGGCACCGGGGGa > 1:10631899/1‑35 (MQ=255) tAAAGCGGCATAAATAAAAAAGGCACCGGGGGAAt < 1:757860/35‑1 (MQ=255) tAAAGCGGCATAAATAAAAAAGGCACCGGGGGAAt > 1:7667563/1‑35 (MQ=255) tAAAGCGGCATAAATAAAAAAGGCACCGGGGGAAt < 1:18106149/35‑1 (MQ=255) tAAAGCGGCATAAATAAAAAAGGCACCGGGGGAAt > 1:16256327/1‑35 (MQ=255) aaaGCGGCATAAATAAAAAAGGCACCGGGGGAATc > 1:18914748/1‑35 (MQ=255) aaaGCGGCATAAATAAAAAAGGCACCGGGGGAATc > 1:7718824/1‑35 (MQ=255) aaaGCGGCATAAATAAAAAAGGCACCGGGGGAATc > 1:1864487/1‑35 (MQ=255) aaaGCGGCATAAATAAAAAAGGCACCGGGGGAATc < 1:139310/35‑1 (MQ=255) aaGCGGCATAAATAAAAAAGGCACCGGGGGAATCg < 1:12352135/35‑1 (MQ=255) aaGCGGCATAAATAAAAAAGGCACCGGGGGAATCg < 1:10129184/35‑1 (MQ=255) aaGCGGCATAAATAAAAAAGGCACCGGGGGAATCg < 1:17273192/35‑1 (MQ=255) gCGGCATAAATAAAAAAGGCACCGGGGGAATCGGt < 1:16185938/35‑1 (MQ=255) gCGGCATAAATAAAAAAGGCACCGGGGGAATCGGt < 1:16993210/35‑1 (MQ=255) gCGGCATAAATAAAAAAGGCACCGGGGGAATCGGt < 1:17061360/35‑1 (MQ=255) cGGCATAAATAAAAAAGGCACCGGGGGAATCGGTg < 1:3870425/35‑1 (MQ=255) cGGCATAAATAAAAAAGGCACCGGGGGAATCGGTg > 1:2726477/1‑35 (MQ=255) ggCATAAATAAAAAAGGCACCGGGGGAATCGGTGc < 1:11449461/35‑1 (MQ=255) gCATAAATAAAAAAGGCACCGGGGGAATCGGTGcc > 1:20505462/1‑35 (MQ=255) cATAAATAAAAAAGGCACCGGGGGAATCGGTGCCt < 1:5960134/35‑1 (MQ=255) cATAAATAAAAAAGGCACCGGGGGAATCGGTGCCt > 1:12038030/1‑35 (MQ=255) cATAAATAAAAAAGGCACCGGGGGAATCGGTGCCt > 1:18966290/1‑35 (MQ=255) cATAAATAAAAAAGGCACCGGGGGAATCGGTGCCt < 1:16413575/35‑1 (MQ=255) ataaataaAAAAGGCACCGGGGGAATCGGTGCCtt < 1:14245030/35‑1 (MQ=255) ataaataaAAAAGGCACCGGGGGAATCGGTGCCtt < 1:19437178/35‑1 (MQ=255) ataaataaAAAAGGCACCGGGGGAATCGGTGCCtt > 1:6804362/1‑35 (MQ=255) ataaataaAAAAGGCACCGGGGGAATCGGTGCCtt > 1:14210875/1‑35 (MQ=255) ataaataaAAAAGGCACCGGGGGAATCGGTGCCtt > 1:9791486/1‑35 (MQ=255) taaataaaAAAGGCACCGGGGGAATCGGTGCCttt < 1:5589751/35‑1 (MQ=255) taaataaaAAAGGCACCGGGGGAATCGGTGCCttt > 1:13355221/1‑35 (MQ=255) taaataaaAAAGGCACCGGGGGAATCGGTGCCttt > 1:18832074/1‑35 (MQ=255) aaataaaAAAGGCACCGGGGGAATCGGTGCCtttt < 1:8446882/35‑1 (MQ=255) aaataaaAAAGGCACCGGGGGAATCGGTGCCtttt < 1:15397885/35‑1 (MQ=255) aaataaaAAAGGCACCGGGGGAATCGGTGCCtttt > 1:11515361/1‑35 (MQ=255) aataaaAAAGGCACCGGGGGAATCGGTGCCttttt < 1:19331774/35‑1 (MQ=255) aaaaaaGGCACCGGGGGAATCGGTGCCTTTttatt > 1:18686266/1‑35 (MQ=255) aaaaaaGGCACCGGGGGAATCGGTGCCTTTttatt < 1:18865068/35‑1 (MQ=255) aaaaaaGGCACCGGGGGAATCGGTGCCTTTttatt > 1:2537789/1‑35 (MQ=255) aaaaaaGGCACCGGGGGAATCGGTGCCTTTttatt > 1:13092595/1‑35 (MQ=255) aaaaaaGGCACCGGGGGAATCGGTGCCTTTttatt > 1:13031727/1‑35 (MQ=255) | TCATCATGGTAGAAGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATT > REL606/235442‑235510 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |