New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 924268 = | 101 (0.980) | 9 (0.120) | 3/36 | NT | 13.4% | coding (722/1431 nt) | ybjT | conserved protein with NAD(P)‑binding Rossmann‑fold domain |
? | REL606 | = 4366448 | 41 (0.530) | coding (1078/3324 nt) | yjeP | predicted mechanosensitive channel |
AGCGCCGCTGGTTGATCCCCATCCCCCTCCCCACCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/924307‑924268 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctgCTACGGCAAATTCATCAGGCCGACGGTCAGCCG < REL606/4366448‑4366416 AGCGCCGCTGGTTGATCCCCATCCCCCTCCCCACC > 1:7892919/1‑35 AGCGCCGCTGGTTGATCCCCATCCCCCTCCCCACC < 1:4365142/35‑1 AGCGCCGCTGGTTGATCCCCATCCCCCTCCCCACC > 1:2538210/1‑35 AGCGCCGCTGGTTGATCCCCATCCCCCTCCCCACC > 1:14567123/1‑35 AGCGCCGCTGGTTGATCCCCATCCCCCTCCCCACC < 1:10435300/35‑1 AGCGCCGCTGGTTGATCCCCATCCACCTCCCCACC < 1:16758406/35‑1 GCGCCGCTGGTTGATCCCCATCCCCCTCCCCACCC < 1:2800378/35‑1 GCGCCGCTGGTTGATCCCCATCCCCCTCCCCACCC > 1:7661657/1‑35 GCGCCGCTGGTTGATCCCCATCCCCCTCCCCACCC > 1:14362642/1‑35 GCGCCGCTGGTTGATCCACATCCCCCTCCCCACCC < 1:6449764/35‑1 CGCCGCTGGTTGATCCCCATCCCCCTCCCCACCCG > 1:2817481/1‑35 CGCCGCTGGTTGATCCCCATCCCCCTCCCCACCCG < 1:79333/35‑1 CGCCGCTGGTTGATCCCCATCCCCCTCCCCACCCG > 1:9725041/1‑35 CGCCGCTGGTTGATCCCCATCCCCCTCCCCACCCG < 1:10797280/35‑1 GCCGCTGGTTGATCCCCATCCCCCTCCCCACCCGC < 1:4855475/35‑1 GCCGCTGGTTGATCCCCATCCCCCTCCCCACCCGC < 1:19450252/35‑1 GCCGCTGGTTGATCCCCATCCCCCTCCCCACCCGC > 1:16758700/1‑35 GCCGCTGGTTGATCCCCATCCCCCTCCCCACCCGC > 1:17857781/1‑35 GCCGCTGGTTGATCCCCATCCCCCTCCCCACCCGC > 1:17373706/1‑35 aCGCTGGTTGATCCCCATCCCCCTCCCCACCCGCT < 1:18161341/34‑1 CCGCTGGTTGATCCCCATCCCCCTCCCCACCCGCT < 1:6960923/35‑1 CCGCTGGTTGATCCCCATCCCCCTCCCCACCCGCT < 1:9620085/35‑1 CGCTGGTTGATCCCCATCCCCCTCCCCACCCGCTG > 1:6531384/1‑35 CCCCCCCCCACCCGCTGCTACGGCAAATTCATCAG < 1:7444544/35‑1 CCCCCCCCACCCGCTGCTACGGCAAATTCATCAGG < 1:165442/35‑1 cccCCCCACCCGCTGCTACGGCAAATTCATCAGGC < 1:16142693/32‑1 ccaCCCACCCGCTGCTACGGCAAATTCATCAGGCC < 1:15744185/32‑1 ccCCCCACCCGCTGCTACGGCAAATTCATCAGGCC < 1:5400478/33‑1 ccCCCCACCCGCTGCTACGGCAAATTCATCAGGCC < 1:2584000/33‑1 cCCCCACCCGCTGCTACGGCAAATTCATCAGGCCG < 1:12571008/34‑1 cCCCCACCCGCTGCTACGGCAAATTCATCAGGCCG < 1:14018094/34‑1 CCCCGCCCGCTGCTACGGCAAATTCATCAGGCCGA < 1:1479523/35‑1 CCCCACCCGCTGCTACGGCAAATTCATCAGGCCGA < 1:1547205/35‑1 CCCCCCCGCTGCTACGGCAAATTCATCAGGCCGAC < 1:4885443/35‑1 CCCACCCGCTGCTACGGCAAATTCATCAGGCCGAC < 1:8485821/35‑1 CCCACCCGCTGCTACGGCAAATTCATCAGGCCGAC < 1:311831/35‑1 CCCACCCGCTGCTACGGCAAATTCATCAGGCCGAC < 1:3206408/35‑1 CCACCCGCTCCTACGGCAAATTCATCAGGCCGACG < 1:17798732/35‑1 gCCCGCTGCTACGGCAAATTCATCAGGCCGACGGT < 1:1665220/34‑1 cCCCGCTGCTACGGCAAATTCATCAGGCCGACGGT < 1:3942359/34‑1 ACCCGCTGCTACGGCAAATTCATCAGGCCGACGGT < 1:15331849/35‑1 CCCGCTGCTACGGCAAATTCATCAGGCCGACGGTC < 1:18430381/35‑1 CCGCTGCTACGGCAAATTCATCAGGCCGACGGTCA < 1:10671536/35‑1 CCGCTGCTACGGCAAATTCATCAGGCCGACGGTCA > 1:8651467/1‑35 CGCTGCTACGGCAAATTCATCAGGCCGACGGTCAG < 1:7030825/35‑1 CGCTGCTACGGCAAATTCATCAGGCCGACGGTCAG < 1:8344730/35‑1 CGCTGCTACGGCAAATTCATCAGGCCGACGGTCAG > 1:6336475/1‑35 CGCTGCTACGGCAAATTCATCAGGCCGACGGTCAG > 1:3297909/1‑35 CGCTGCTACGGCAAATTCATCAGGCCGACGGTCAG < 1:2729873/35‑1 CGCTGCTACGGCAAATTCATCAGGCCGACGGTCAG < 1:10687930/35‑1 CGCTGCTACGGCAAATTCATCAGGCCGACGGTCAG > 1:18823459/1‑35 CGCTGCTACGGCAAATTCATCAGGCCGACGGTCAG < 1:13951773/35‑1 CGCTGCTACGGCAAATTCATCAGGCCGACGGGCAG > 1:2777630/1‑35 GCTGCTACGGCAAATTCATCAGGCCGACGGTCAGC < 1:16614491/35‑1 GCTGCTACGGCAAATTCATCAGGCCGACGGTCAGC < 1:11660946/35‑1 GCTGCTACGGCAAATTCATCAGGCCGACGGGCAGC > 1:1429759/1‑35 gTGCTACGGCAAATTCATCAGGCCGACGGTAAGCC < 1:6736965/34‑1 CTGCTACGGCAAATTCATCAGGCCGACGGTCAGCC < 1:16996425/35‑1 CTGCTACGGCAAATTCATCAGGCCGACGGGCAGCC > 1:336282/1‑35 TGCTACGGCAAATTCATCAGGCCGACGGTCAGCCG > 1:221937/1‑35 TGCTACGGCAAATTCATCAGGCCGACGGTCAGCCG > 1:8875143/1‑35 AGCGCCGCTGGTTGATCCCCATCCCCCTCCCCACCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/924307‑924268 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctgCTACGGCAAATTCATCAGGCCGACGGTCAGCCG < REL606/4366448‑4366416 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |