Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | REL606 | 3,401,754 | C→A | 100% | R78L (CGC→CTC) | rpsG ← | 30S ribosomal protein S7 |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 3,401,754 | 0 | C→A | 100.0% | 354.0 | 112 | R78L (CGC→CTC) | rpsG | 30S ribosomal protein S7 |
Reads supporting (aligned to +/- strand): new base (54/58): ref base (0/0): total (54/58) |
Only 100 of 125 total aligned reads displayed.
CTGGTACCTGATAAGTAGAACCACCAACGCGGCGAGACTTAACTTCTACAGTCGGGCGCACGTT > REL606/3401722‑3401785 | cTGGTACCTGATAAGTAGAACCACCAACGCGGAga > 1:9356556/1‑35 (MQ=255) cTGGTACCTGATAAGTAGAACCACCAACGCGGAga > 1:16428133/1‑35 (MQ=255) cTGGTACCTGATAAGTAGAACCACCAACGCGGAga > 1:15969958/1‑35 (MQ=255) cTGGTACCTGATAAGTAGAACCACCAACGCGGAga > 1:10061025/1‑35 (MQ=255) ggTACCTGATAAGTAGAACCACCAACGCGGAgaga > 1:4127222/1‑35 (MQ=255) gTACCTGATAAGTAGACCCACCAACGCGGAGAGAc < 1:13198222/35‑1 (MQ=255) gTACCTGATAAGTAGAACCACCAACGCGGAGAGAc > 1:2856579/1‑35 (MQ=255) gTACCTGATAAGTAGAACCACCAACGCGGAGAGAc > 1:281286/1‑35 (MQ=255) gTACCTGATAAGTAGAACCACCAACGCGGAGAGAc > 1:4258588/1‑35 (MQ=255) gTACCTGATAAGTAGAACCACCAACGCGGAGAGAc > 1:5489026/1‑35 (MQ=255) gTACCTGATAAGTAGAACCACCAACGCGGAGAGAc > 1:1150002/1‑35 (MQ=255) tACCTGATAAGTAGAACCACCAACGCGGAGAGACt > 1:3996945/1‑35 (MQ=255) tACCTGATAAGTAGAACCACCAACGCGGAGAGACt > 1:8200488/1‑35 (MQ=255) tACCGGATAAGTAGACCCACCAACGCGGAGAGACt < 1:9227819/35‑1 (MQ=255) aCCTGATAAGTAGACCCACCAACGCGGAGAGACtt < 1:8327411/35‑1 (MQ=255) ccTGATAAGTAGACCCACCAACGCGGAGAGACTTa < 1:11876110/35‑1 (MQ=255) ccTGATAAGTAGAACCACCAACGCGGAGAGACTTa > 1:18295780/1‑35 (MQ=255) ccTGATAAGTAGAACCACCAACGCGGAGAGACTTa > 1:18362248/1‑35 (MQ=255) ccTGATAAGTAGAACCACCAACGCGGAGAGACTTa > 1:838886/1‑35 (MQ=255) ccTGATAAGTAGAACCACCAACGCGGAGAGACTTa > 1:5705756/1‑35 (MQ=255) cTGATAAGTAGAACCACCAACGCGGAGAGACTTaa > 1:12418504/1‑35 (MQ=255) cTGATAAGTAGAACCACCAACGCGGAGAGACTTaa > 1:17341466/1‑35 (MQ=255) cTGATAAGTAGAACCACCAACGCGGAGAGACTTaa > 1:10337530/1‑35 (MQ=255) tGATAAGTAGAACCACCAACGCGGAGAGACTTAAc > 1:66819/1‑35 (MQ=255) gATAAGTAGACCCACCAACGCGGAGAGACTTAACt < 1:17795744/35‑1 (MQ=255) gATAAGTAGAACCACCAACGCGGAGAGACTTAACt < 1:4423757/35‑1 (MQ=255) aTAAGTAGAACCACCAACGCGGAGAGACTTAACtt > 1:279579/1‑35 (MQ=255) aTAAGTAGAACCACCAACGCGGAGAGACTTAACtt > 1:11969972/1‑35 (MQ=255) tAAGTAGACCCACCAACGCGGAGAGACTTAACTTc < 1:14139829/35‑1 (MQ=255) tAAGTAGACCCACCAACGCGGAGAGACTTAACTTc < 1:18800904/35‑1 (MQ=255) tAAGTAGAACCACCAACGCGGAGAGACTTAACTTc > 1:9332360/1‑35 (MQ=255) tAAGTAGAACCACAAACGCGGAGAGACTTAACTTc < 1:8782476/35‑1 (MQ=38) aaaGTAGAACCACCAACGCGGAGAGACTTAACTTc < 1:1099081/34‑1 (MQ=255) aaGTAGACCCACCAACGCGGAGAGACTTAACTTCt < 1:17800854/35‑1 (MQ=255) aaGTAGACCCACCAACGCGGAGAGACTTAACTTCt < 1:19283221/35‑1 (MQ=255) aaGTAGACCCACCAACGCGGAGAGACTTAACTTCt < 1:1529986/35‑1 (MQ=255) aaGTAGAACCACCAACGCGGAGAGACTTAACTTCt > 1:3332217/1‑35 (MQ=255) aaGTAGAACCACCAACGCGGAGAGACTTAACTTCt > 1:4771603/1‑35 (MQ=255) tttAGAGCCACCAACGCGGAGAGACTTAACTTCTa < 1:16696361/33‑1 (MQ=255) ggTAGAACCACCAACGCGGAGAGACTTAACTTCTa < 1:19612186/34‑1 (MQ=255) agaaGACCCACCAACGCGGAGAGACTTAACTTCTa < 1:11888375/32‑1 (MQ=255) aGTAGACCCACCAACGCGGAGAGACTTAACTTCTa < 1:6009938/35‑1 (MQ=255) aGTAGAACCACCAACGCGGAGAGACTTAACTTCTa < 1:20383899/35‑1 (MQ=255) aGTAGAACCACCAACGCGGAGAGACTTAACTTCTa < 1:12969828/35‑1 (MQ=255) aGTAAACCCACCAACGCGGAGAGACTTAACTTCTa < 1:5512836/35‑1 (MQ=255) gTAGAACCACCAACGCGGAGAGACTTAACTTCTAc < 1:3900523/35‑1 (MQ=255) gTAGAACCACCAACGCGGAGAGACTTAACTTCTAc < 1:20060991/35‑1 (MQ=255) gTAGAACCACCAACGCGGAGAGACTTAACTTCTAc < 1:16620527/35‑1 (MQ=255) gTAGAACCACAAACGCGGAGAGACTTAACTTCTAc < 1:13378165/35‑1 (MQ=38) tAGACCCACCAACGCGGAGAGACTTAACTTCTACa < 1:17153902/35‑1 (MQ=255) tAGAACCACCAACGCGGAGAGACTTAACTTCTACa > 1:3677994/1‑35 (MQ=255) tAGAACCACCAACGCGGAGAGACTTAACTTCTACa > 1:3256460/1‑35 (MQ=255) aGACCCACCAACGCGGAGAGACTTAACTTCTACAg < 1:648110/35‑1 (MQ=255) aGACCCACCAACGCGGAGAGACTTAACTTCTACAg < 1:8784264/35‑1 (MQ=255) aGACCCACCAACGCGGAGAGACTTAACTTCTACAg < 1:13162726/35‑1 (MQ=255) aGAACCACCAACGCGGAGAGACTTAACTTCTACAg > 1:16098928/1‑35 (MQ=255) gacccaccaACGCGGAGAGACTTAACTTCTACAGt < 1:4745759/32‑1 (MQ=255) gAACCACCAACGCGGAGAGACTTAACTTCTACAGt > 1:18628211/1‑35 (MQ=255) gAACCACCAACGCGGAGAGACTTAACTTCTACAGt > 1:11961649/1‑35 (MQ=255) gAACCACCAACGCGGAGAGACTTAACTTCTACAGn < 1:17740661/35‑1 (MQ=255) acccaccaACGCGGAGAGACTTAACTTCTACAGTc < 1:1887502/33‑1 (MQ=255) acccaccaACGCGGAGAGACTTAACTTCTACAGTc < 1:17808752/33‑1 (MQ=255) acccaccaACGCGGAGAGACTTAACTTCTACAGTc < 1:17707376/33‑1 (MQ=255) acccaccaACGCGGAGAGACTTAACTTCTACAGTc < 1:4531544/33‑1 (MQ=255) aaCCACCAACGCGGAGAGACTTAACTTCTACAGTc > 1:13905090/1‑35 (MQ=255) aaCCACCAACGCGGAGAGACTTAACTTCTACAGTc < 1:19163153/35‑1 (MQ=255) aaCCACCAACGCGGAGAGACTTAACTTCTACAGTc > 1:17100511/1‑35 (MQ=255) cccaccaACGCGGAGAGACTTAACTTCTACAGTCg < 1:10451284/34‑1 (MQ=255) cccaccaACGCGGAGAGACTTAACTTCTACAGTCg < 1:15059325/34‑1 (MQ=255) accaccAACGCGGAGAGACTTAACTTCTACAGTCg > 1:4378400/1‑35 (MQ=255) ccaccaACGCGGAGAGACTTAACTTCTACAGTCgg < 1:9259901/35‑1 (MQ=255) ccaccaACGCGGAGAGACTTAACTTCTACAGTCgg > 1:8728744/1‑35 (MQ=255) ccaccaACGCGGAGAGACTTAACTTCTACAGTCgg < 1:14373613/35‑1 (MQ=255) cgccaACGCGGAGAGACTTAACTTCTACAGTCggg < 1:10070986/33‑1 (MQ=255) caccaACGCGGAGAGACTTAACTTCTACAGTCggg < 1:11552511/35‑1 (MQ=255) caccaACGCGGAGAGACTTAACTTCTACAGTCggg > 1:18813230/1‑35 (MQ=255) accaACGCGGAGAGACTTAACTTCTACAGTCgggg > 1:2828983/1‑34 (MQ=255) accaACGCGGAGAGACTTAACTTCTACAGTCgggg > 1:2104090/1‑34 (MQ=255) accaACGCGGAGAGACTTAACTTCTACAGTCGGgc < 1:16576845/35‑1 (MQ=255) accaACGCGGAGAGACTTAACTTCTACAGTCGGgc < 1:15418248/35‑1 (MQ=255) accaACGCGGAGAGACTTAACTTCTACAGTCGGgc < 1:19336690/35‑1 (MQ=255) ccaACGCTGAGAGACTTAACTTCTACAGTCGGgcg > 1:7064607/1‑35 (MQ=38) aaCGCGGAGAGACTTAACTTCTACAGTCGTGCGCa > 1:15748952/1‑35 (MQ=255) aaCGCGGAGAGACTTAACTTCTACAGTCGGGCGCa < 1:10685749/35‑1 (MQ=255) aaCGCGGAGAGACTTAACTTCTACAGTCGGGCGCa > 1:1943509/1‑35 (MQ=255) aaCGCGGAGAGACTTAACTTCTACAGTCGGGCGCa > 1:14037621/1‑35 (MQ=255) aCGCGGAGAGACTTAACTTCTACAGTCGGGCGGAc > 1:16932146/1‑35 (MQ=38) aCGCGGAGAGACTTAACTTCTACAGTCGGGCGCAc < 1:16214754/35‑1 (MQ=255) aCGCGGAGAGACTTAACTTCTACAGTCGGGCGCAc < 1:13501359/35‑1 (MQ=255) aCGCGGAGAGACTTAACTTCTACAGTCGGGCGCAc < 1:5407100/35‑1 (MQ=255) aCGCGGAGAGACTTAACTTCTACAGTCGGGAGCAc > 1:19917498/1‑35 (MQ=255) cgcgGAGAGACTTAACTTCTACAGTCGGGCGCACg > 1:6090466/1‑35 (MQ=255) cgcgGAGAGACTTAACTTCTACAGTCGGGCGCACg < 1:7500896/35‑1 (MQ=255) cgcgGAGAGACTTAACTTCTACAGTCGGGCGCACg < 1:4604810/35‑1 (MQ=255) gcggagAGACTTAACTTCTACAGTCGGGCGCACGt > 1:18485036/1‑35 (MQ=255) gcggagAGACTTAACTTCTACAGTCGGGCGCACGt < 1:4971144/35‑1 (MQ=255) cggagAGACTTAACTTCTACAGTCGGGCGCACggt > 1:871642/1‑33 (MQ=38) cggagAGACTTAACTTCTACAGTCGGGCGCACGtt > 1:14033706/1‑35 (MQ=255) cggagAGACTTAACTTCTACAGTCGGGCGCACGtt > 1:1356105/1‑35 (MQ=255) cggagAGACTTAACTTCTACAGTCGGGCGCACGtt < 1:3461297/35‑1 (MQ=255) | CTGGTACCTGATAAGTAGAACCACCAACGCGGCGAGACTTAACTTCTACAGTCGGGCGCACGTT > REL606/3401722‑3401785 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |