Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 4,613,019 +TT :: IS150 (+) 100% intergenic (‑16/‑91) smp ← / → serB hypothetical protein/3‑phosphoserine phosphatase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 664686 =NA (NA)139 (1.350) 45/48 NT 100% intergenic (‑77/‑49) gltL/insJ‑2 ATP‑binding protein of glutamate/aspartate transport system; b0652_1/IS150 hypothetical protein
?REL606 = 4613019 0 (0.000)intergenic (‑16/‑90) smp/serB hypothetical protein/3‑phosphoserine phosphatase
* ? REL606 = 3894996NA (NA)114 (1.160) 38/46 NT 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 4613020 = 0 (0.000)intergenic (‑17/‑89) smp/serB hypothetical protein/3‑phosphoserine phosphatase

Only 100 of 194 total aligned reads displayed.

ATTTCATCGTCCAACAAAATGGGTGCAGTACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/664719‑664686
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCAAAGGGTGGAAGATGGCTCGCACAAAACTG  <  REL606/4613019‑4612986
                                                                    
ATTTCATCGTCCAACAAAATGGGTGCAGTACAAAT                                   >  1:19526277/1‑35
ATTTCATCGTCCAACAAAATGGGTGCAGTACAAAT                                   <  1:13915807/35‑1
ATTTCATCGTCCAACAAAATGGGTGCAGTACAAAT                                   <  1:5702173/35‑1
ATTTCATCGTCCAACAAAATGGGTGCAGTACAAAT                                   >  1:5401886/1‑35
ATTTCATCGTCCAACAAAATGGGTGCAGTACAAAT                                   <  1:1816326/35‑1
 TTTCATCGTCCAACAAAATGGGTGCAGTATAAATT                                  <  1:14334810/35‑1
 TTTCATCGTCCAACAAAATGGGTGCAGTACACATg                                  <  1:12223212/35‑2
 TTTCATCGTCCAACAAAATGGGTGCAGTACAAATT                                  <  1:4597884/35‑1
 TTTCATCGTCCAACAAAATGGGTGCAGTACAAATT                                  >  1:10681655/1‑35
 TTTCATCGTCCAACAAAATGGGTGCAGTACAAATT                                  >  1:10090653/1‑35
 TTTCATCGTCCAACAAAATGGGTGCAGTACAAATT                                  <  1:18946184/35‑1
  TTCATCGTCCAACAAAATGGGTGCAGTACAAATTT                                 <  1:4089923/35‑1
  TTCATCGTCCAACAAAATGGGTGCAGTACAAATTT                                 >  1:9416534/1‑35
  TTCATCGTCCAACAAAATGGGTGCAGTACAAATTT                                 >  1:9627609/1‑35
  TTCATCGTCCAACAAAATGGGTGCAGTACAAATTT                                 >  1:6331747/1‑35
   TCATCGTCCAACAAAATGGGTGCAGTACAAATTTC                                <  1:14768487/35‑1
   TCATCGTCCAACAAAATGGGTGCAGTACAAATTTC                                <  1:13552865/35‑1
   TCATCGTCCAACAAAATGGGTGCAGTACAAATTTC                                <  1:10061756/35‑1
    CATCGTCCTACAAAATGGGTGCAGTACAAATTTCA                               <  1:16788433/35‑1
    CATCGTCCAACAAAATGGGTGCAGTACAAATTTCA                               <  1:11482850/35‑1
    CATCGTCCAACAAAATGGGTGCAGTACAAATTTCA                               <  1:9306884/35‑1
    CATCGTCCAACAAAATGGGTGCAGTACAAATTTCA                               <  1:12650597/35‑1
     ATCGTCCAACAAAATGGGTGCAGTACAAATTTCAA                              <  1:6231960/35‑1
     ATCGTCCAACAAAATGGGTGCAGTACAAATTTCAA                              <  1:6694722/35‑1
     ATCGTCCAACAAAATGGGTGCAGTACAAATTTCAA                              >  1:3003347/1‑35
     ATCGTCCAACAAAATGGGTGCAGTACAAATTTCAA                              <  1:11821936/35‑1
      TCGTCCAACAAAATGGGTGCAGTACAAATTTCAAA                             <  1:17179285/35‑1
      TCGTCCAACAAAATGGGTGCAGTACAAATTTCAAA                             <  1:4486104/35‑1
      TCGTCCAACAAAATGGGTGCAGTACAAATTTCAAA                             >  1:2690236/1‑35
      TCGTCCAACAAAATGGGTGCAGTACAAATTTCAAA                             <  1:13444080/35‑1
       CGTCCAACAAAATGGGTGCAGTACAAATTTCAAAG                            >  1:19041707/1‑35
       CGTCCAACAAAATGGGTGCAGTACAAATTTCAAAG                            <  1:15326868/35‑1
       CGTCCAACAAAATGGGTGCAGTACAAATTTCAAAG                            <  1:17383977/35‑1
        GTCCAACAAAATGGGTGCAGTACAAATTTCAAAGG                           >  1:16094141/1‑35
         TCCAACAAAATGGGTGCAGTACAAATTTCAAAGGG                          <  1:7285970/35‑1
         TCCAACAAAATGGGTGCAGTACAAATTTCAAAGGG                          >  1:17596520/1‑35
         TCCAACAAAATGGGTGCAGTACAAATTTCAAAGGG                          >  1:14021984/1‑35
          CCAACAAAATGGGTGCAGTACAAATTTCAAAGGGT                         >  1:5859062/1‑35
          CCAACAAAATGGGTGCAGTACAAATTTCAAAGGGT                         <  1:19221906/35‑1
           CAACAAAATGGGTGCAGTACAAATTTCAAAGGGTG                        >  1:18066957/1‑35
           CAACAAAATGGGTGCAGTACAAATTTCAAAGGGTG                        <  1:3838957/35‑1
           CAACAAAATGGGTGCAGTACAAATTTCAAAGGGTG                        >  1:16710471/1‑35
           CAACAAAATGGGTGCAGTACAAATTTCAAAGGGTG                        <  1:7788120/35‑1
            AACAAAATGGGTGCAGTACAAATTTCAAAGGGTGa                       <  1:14284545/35‑2
            AACAAAATGGGTGCAGTACAAATTTCAAAGGGTGG                       >  1:3553819/1‑35
            AACAAAATGGGTGCAGTACAAATTTCAAAGGGTGG                       <  1:12481385/35‑1
            AACAAAATGGGTGCAGTACAAATTTCAAAGGGTGG                       <  1:609149/35‑1
             ACAAAATGGGTGCAGTACAAATTTCAAAGGGTGGA                      <  1:1831097/35‑1
              CAAAATGGGTGCAGTACAAATTTCAAAGGGTGGAA                     >  1:17684854/1‑35
              CAAAATGGGTGCAGTACAAATTTCAAAGGGTGGAA                     <  1:1790061/35‑1
              CAAAATGGGTGCAGTACAAATTTCAAAGGGTGGAA                     <  1:1547994/35‑1
              CAAAATGGGTGCAGTACAAATTTCAAAGGGTGGAA                     <  1:20095759/35‑1
               AAAATGGGTGCAGTACAAATTTCAAAGGGTGGAAG                    >  1:14615038/1‑35
                AAATGGGTGCAGTACAAATTTCAAAGGGTGGAAGA                   >  1:4971545/1‑35
                AAATGGGTGCAGTACAAATTTCAAAGGGTGGAAGA                   <  1:9813226/35‑1
                AAATAGGTGCAGTACAAATTTCAAAGGGTGGAAGA                   <  1:5584802/35‑1
                 AATGGGTGCAGTACAAATTTCAAAGGGTGGAAGAT                  <  1:10006959/35‑1
                 AATGGGTGCAGTACAAATTTCAAAGGGTGGAAGAT                  >  1:13060475/1‑35
                 AATGGGTGCAGTACAAATTTCAAAGGGTGGAAGAT                  >  1:18662530/1‑35
                  ATGGGTGCAGTACAAATTTCAAAGGGTGGAAGATG                 <  1:835056/35‑1
                  ATGGGTGCAGTACAAATTTCAAAGGGTGGAAGATG                 >  1:5268660/1‑35
                  ATGGGTGCAGTACAAATTTCAAAGGGTGGAAGATG                 >  1:14973647/1‑35
                  ATGGGTGCAGTACAAATTTCAAAGGGTGGAAGATG                 >  1:4054069/1‑35
                  ATGGGTGCAGTACAAATTTCAAAGGGTGGAAGATG                 <  1:19502128/35‑1
                   TGGGTGCAGTACAAATTTCAAAGGGTGGAAGATGG                <  1:6591613/35‑1
                   TGGGTGCAGTACAAATTTCAAAGGGTGGAAGATGG                >  1:14253009/1‑35
                   TGGGTGCAGTACAAATTTCAAAGGGTGGAAGATGG                <  1:4820886/35‑1
                   TGGGTGCAGTACAAATTTCAAAGGGTGGAAGATGG                <  1:16630045/35‑1
                   TGGGTGCAGTACAAATTTCAAAGGGTGGAAGATGG                <  1:19117665/35‑1
                   TGGGTGCAGTACAAATTTCAAAGGGTGGAAGATGG                <  1:2962519/35‑1
                    GGGTGCAGTACAAATTTCAAAGGGTGGAAGATGGC               <  1:12338061/35‑1
                    GGGTGCAGTACAAATTTCAAAGGGTGGAAGATGGC               <  1:1803311/35‑1
                     GGTGCAGTACAAATTTCAAAGGGTGGAAGATGGCT              <  1:7211533/35‑1
                     GGTGCAGTACAAATTTCAAAGGGTGGAAGATGGCT              <  1:201972/35‑1
                      GTGCAGTACAAATTTCAAAGGGTGGAAGATGGCTC             <  1:7460581/35‑1
                      GTGCAGTACAAATTTCAAAGGGTGGAAGATGGCTC             >  1:3290360/1‑35
                       TGCAGTACAAATTTCAAAGGGTGGAAGATGGCTCG            <  1:7735339/35‑1
                       TGCAGTACAAATTTCAAAGGGTGGAAGATGGCTCG            <  1:1750036/35‑1
                       TGCAGTACAAATTTCAAAGGGTGGAAGATGGCTCG            <  1:6795114/35‑1
                       TGCAGTACAAATTTCAAAGGGTGGAAGATGGCTCG            >  1:15672076/1‑35
                       TGCAGTACAAATTTCAAAGGGTGGAAGATGGCTCG            <  1:3511611/35‑1
                        GCAGTACAAATTTCAAAGGGTGGAAGATGGCTCGC           >  1:15954720/1‑35
                         CAGTACAAATTTCAAAGGGTGGAAGATGGCTCGCA          >  1:3732767/1‑35
                         CAGTACAAATTTCAAAGGGTGGAAGATGGCTCGCA          >  1:7665179/1‑35
                         CAGTACAAATTTCAAAGGGTGGAAGATGGCTCGCA          >  1:2562420/1‑35
                          AGTACAAATTTCAAAGGGTGGAAGATGGCTCGCAC         <  1:317460/35‑1
                          AGTACAAATTTCAAAGGGTGGAAGATGGCTCGCAC         >  1:10892625/1‑35
                           GTACAAATTTCAAAGGGTGGAAGATGGCTCGCACA        <  1:2171325/35‑1
                            TACAAATTTCAAAGGGTGGAAGATGGCTCGCACAA       <  1:14194920/35‑1
                            TACAAATTTCAAAGGGTGGAAGATGGCTCGCACAA       >  1:10487688/1‑35
                             gCAAATTTCAAAGGGTGGAAGATGGCTCGCACAAA      >  1:14605698/2‑35
                             ACAAATTTCAAAGGGTGGAAGATGGCTCGCACAAA      >  1:12884200/1‑35
                             ACAAATTTCAAAGGGTGGAAGATGGCTCGCACAAA      <  1:13295089/35‑1
                             ACAAATTTCAAAGGGTGGAAGATGGCTCGCACAAA      <  1:14920163/35‑1
                             ACAAATTTCAAAGGGTGGAAGATGGCTCGCACAAA      <  1:11069007/35‑1
                               AAATTTCAAAGGGTGGAAGATGGCTCGCACAAAAC    >  1:351430/1‑35
                               AAATTTCAAAGGGTGGAAGATGGCTCGCACAAAAC    <  1:8259346/35‑1
                                AATTTCAAAGGGTGGAAGATGGCTCGCACAAAACT   >  1:19283449/1‑35
                                AATTTCAAAGGGTGGAAGATGGCTCGCACAAAACT   >  1:20580043/1‑35
                                 ATTTCAAAGGGTGGAAGATGGCTCGCACAAAACTG  <  1:11190466/35‑1
                                                                    
ATTTCATCGTCCAACAAAATGGGTGCAGTACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/664719‑664686
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCAAAGGGTGGAAGATGGCTCGCACAAAACTG  <  REL606/4613019‑4612986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.