New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 505984 = | 28 (0.270) | 12 (0.130) | 6/42 | NT | 16.8% | coding (808/816 nt) | allR | DNA‑binding transcriptional repressor |
? | REL606 | 2525727 = | 94 (1.050) | coding (4/1350 nt) | hyfD | hydrogenase 4 membrane subunit |
Only 100 of 169 total aligned reads displayed.
TTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGTTTTGTTCGCCGCACTGACCACGCTGTGCAT > REL606/2525693‑2525761 | tccgcagagcgggatgcgacagacattatggatgg > 1:288511‑M2/35‑35 (MQ=255) ccgcagagcgggatgcgacagacattatggatggg > 1:17086068‑M2/34‑35 (MQ=255) ccgcagagcgggatgcgacagacattatggatggg > 1:11743136‑M2/34‑35 (MQ=255) tcgtttTCGCCACAACGTCGGGCCGGCGAATgggg > 1:7881264/1‑35 (MQ=255) tcgtttTCGCCACAACGTCGGGCCGCCGAATgggg > 1:11637089/1‑35 (MQ=255) cgcagagcgggatgcgacagacattatggatgggg > 1:10273900‑M2/33‑35 (MQ=255) cgcagagcgggatgcgacagacattatggatgggc > 1:18957142‑M2/33‑34 (MQ=255) gcagagcgggatgcgacagacattatggatggggg > 1:3523611‑M2/32‑35 (MQ=255) cgtttTCGCCACAACGTCGGGCCGCCGAATggggg > 1:3867565/1‑35 (MQ=255) gtttTCGCCACAACGTCGGGCCGCCGAATgggggg > 1:7542223/1‑34 (MQ=255) gtttTCGCCACAACGTCGGGCCGCCGAATgggggg > 1:11131614/1‑34 (MQ=255) cagagcgggatgcgacagacattatggatggggtt > 1:15337725‑M2/31‑33 (MQ=255) cagagcgggatgcgacagacattatggatgGGGGt > 1:17307965‑M2/31‑35 (MQ=255) tttCGCCACAACGTCGGGCCGCCGAATGGGGGgtt > 1:14887971/1‑35 (MQ=255) gagcgggatgcgacagacattatggatgGGGtttg > 1:5085824‑M2/29‑34 (MQ=255) gagcgggatgcgacagacattatggatgGGGTttt > 1:14446872‑M2/29‑35 (MQ=255) ttCGCCACACCGTCGGGCCGCCGAATGGGGGtttt < 1:17289158/35‑1 (MQ=255) ttCGCCACAACGTCGGGCCGCCGAATGGGGGtttn < 1:4142625/35‑1 (MQ=255) ttCGCCACAACGTCGGGCCGCCGAATGGGGGgttt > 1:13687622/1‑35 (MQ=255) ttCGCCACAACGTCGGGCCGCCGAATGGGGGgttt > 1:6317275/1‑35 (MQ=255) ttCCCCACAACGTCGGGCCGCCGAATGGGGGtttt < 1:16857699/35‑1 (MQ=255) agcgggatgcgacagacattatggatgGGGGtttt > 1:12910844‑M2/28‑35 (MQ=255) agcgggatgcgacagacattatggatgGGGGtttt > 1:10946807‑M2/28‑35 (MQ=255) tCGCCACAACGTCGGGCCGCCGAATGGGGGTTTTg < 1:9109362/35‑1 (MQ=255) tCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTg > 1:11522261/1‑35 (MQ=255) gcgggatgcgacagacattatggatgGGGGTTTTg > 1:15032790‑M2/27‑35 (MQ=255) cgggatgcgacagacattatggatgGGGGTTTTGt > 1:3006655‑M2/26‑35 (MQ=255) cGCCACAACGTCGGGCCGCCGAATGGGGGGTTTGt > 1:10103750/1‑35 (MQ=255) gCCACACCGTCGGGCCGCCGAATGGGGGTTTTGtt < 1:7946966/35‑1 (MQ=255) gCCACAACGTCGGGCCGCCGAATGGGGGTTTTGtt < 1:17738208/35‑1 (MQ=255) gCCACAACGTCGGGCCGCCGAATGGGGGGTTTggt > 1:3387949/1‑33 (MQ=25) gCCACAACGTCGGGCCGCCGAATGGGGGGTTTGtt > 1:2811681/1‑35 (MQ=255) gCCACAACGTCGGGCCGCCGAATGGGGGGTTTGtt > 1:13344321/1‑35 (MQ=255) ggatgcgacagacattatggatgGGGGTTTTGTTc > 1:4787997‑M2/24‑35 (MQ=255) ccACAACGTCGGGCCGCCGAATGGGGGGTTTGttg > 1:7212778/1‑34 (MQ=255) cacaACGTCGGGCCGCCGAATGGGGGTTTTGTTcg < 1:16968972/35‑1 (MQ=255) cacaACGTCGGGCCGCCGAATGGGGGGTTTGTTcg > 1:17544334/1‑35 (MQ=255) cacaACGTCGGGCCGCCGAATGGGGGGTTTGTTcg > 1:18145249/1‑35 (MQ=255) cacaACGTCGGGCCGCCGAATGGGGGGTTTGTTcg > 1:12484502/1‑35 (MQ=255) cacaACGTCGGGCCGCCGAATGGGGGGTTTGTTcg > 1:16223954/1‑35 (MQ=255) acaCCGTCGGGCCGCCGAATGGGGGTTTTGTTcgc < 1:11855971/35‑1 (MQ=255) acaCCGTCGGGCCGCCGAATGGGGGTTTTGTTcgc < 1:8572337/35‑1 (MQ=255) acaACGTCGGGCCGCCGAATGGGGGGGTTGTTtgc > 1:13073154/1‑35 (MQ=21) acaACGTCGGCCCGCCGAATGGGGGTTTTGTTcgc < 1:18688366/35‑1 (MQ=255) tgcgacagacattatggatgGGGGTTTTgttccca > 1:5850326‑M2/21‑32 (MQ=255) caccGTCGGCCCGCCGAATGGGGGTTTTGTTcgcc < 1:14118312/32‑1 (MQ=37) caACGTCGGGCCGCCGAATGGGGGTTTTGTTcgcc > 1:10560804/1‑35 (MQ=255) agcGTCCGGCCGCCGAATGGGGGTTTTGTTcgccg < 1:59693/33‑1 (MQ=38) ccGTCGGGCCGCCGAATGGGGGTTTTGTTcgccgc < 1:10375558/34‑1 (MQ=255) ccGTCGGGCCGCCGAATGGGGGTTTTGTTcgccgc < 1:13186766/34‑1 (MQ=255) aCGTCGGGCCGCCGAATGGGGGGTTTTTTcgccgc > 1:15065426/1‑35 (MQ=38) cGTCGGGCCGCCGAATGGGGGTTTTGTTCGCCGCa < 1:3921149/35‑1 (MQ=255) cGTCGGGCCGCCGAATGGGGGTTTTGTTCGCCGCa > 1:13769290/1‑35 (MQ=255) gTCGGGCCGCCGAATGGGGGTTTTGTTCGCCGCAc < 1:6617737/35‑1 (MQ=255) gTCGGGCCGCCGAATGGGGGTTTTGTTCGCCGCAc > 1:12739125/1‑35 (MQ=255) gTCGGGCCGCCGAATGGGGGTTTTGTTCGCCGCAc < 1:3633637/35‑1 (MQ=255) gTCGGGCCGCCGAATGGGGGGTTTGGTCGCCGCAc > 1:8238878/1‑35 (MQ=37) tCGGGCCGCCGAATGGGGGTTTTGTTCGCCGCACt < 1:10886050/35‑1 (MQ=255) tCGGGCCGCCGAATGGGGGTTTTGTTCGCCGCACt < 1:3774384/35‑1 (MQ=255) tCGGGCCGCCGAATGGGGGTTTTGTTCGCCGCACt > 1:3719772/1‑35 (MQ=255) tCGGGCCGCCGAATGGGGGTTTTGTTCGCCGCACt < 1:13963216/35‑1 (MQ=255) tCGGGCCGCCGAATGGGGGTTTTGTTCGCCGCACt < 1:16372807/35‑1 (MQ=255) tCGGGCCGCCGAATGGGGGGTTTGTTCGCCGCACt > 1:12668265/1‑35 (MQ=255) cGGGCCGCCGAATGGGTGTTTTGTTCGCCGCACTg > 1:14357366/1‑35 (MQ=255) cGGGCCGCCGAATGGGGGTTTTGTTCGCCTCACTg > 1:15761270/1‑35 (MQ=255) cGGGCCGCCGAATGGGGGTTTTGTTCGCCGCACTg < 1:12268103/35‑1 (MQ=255) agggCCGCCGAATGGGGGTTTTGTTCGCCGCACTg < 1:1654772/34‑1 (MQ=255) gggCCGCCGAATGGGGGTTTTGTTCGCCGCACTGa < 1:5609842/35‑1 (MQ=255) gggCCGCCGAATGGGGGTTTTGTTCGCCGCACTGa < 1:16120325/35‑1 (MQ=255) gggCCGCCGAATGGGGGTTTTGTTCGCCGCACTGa > 1:2120970/1‑35 (MQ=255) ggCCGCCGAATGGGGGTTTTGTTCGCCGCACTGAc < 1:14397521/35‑1 (MQ=255) ggCCGCCGAATGGGGGTTTTGTTCGCCGCACTGAc > 1:2464447/1‑35 (MQ=255) gccgccGAATGGGGGTTTTGTTCGCCGCACTGAcc < 1:19882425/35‑1 (MQ=255) gccgccGAATGGGGGTTTTGTTCGCCGCACTGAcc < 1:13555238/35‑1 (MQ=255) ccgccgAATGGGGTTTTTTTTCGCCGCACTGACCa > 1:1596208/1‑35 (MQ=37) ccgccgAATGGGGGTTTTGTTCGCCGCACTGACCa < 1:7656815/35‑1 (MQ=255) cgccgAATGGGGGTTTTGTTCGCCGCACTGACCAc < 1:5161641/35‑1 (MQ=255) cgccgAATGGGGGTTTTGTTCGCCGCACTGACCAc < 1:8522722/35‑1 (MQ=255) gccgAATGTGGGTTTTGTTCGCCGCACTGACCACg > 1:20441508/1‑35 (MQ=255) gccgAATGGGGGTTTTGTTCGCCGCACTGACCACg > 1:16192770/1‑35 (MQ=255) tctaaTGGGGGTTTTGTTCGCCGCACTGACCACGc < 1:3994464/32‑1 (MQ=255) ccgAATGGGGGTTTTGTTCGCCGCACTGACCACGc > 1:3151097/1‑35 (MQ=255) ccgAATGGGGGTTTTGTTCGCCGCACTGACCACGc < 1:10131756/35‑1 (MQ=255) ccgAATGGGGGTTTTGTTCGCCGCACTGACCACGc > 1:6320140/1‑35 (MQ=255) cgAATGGGGGTTTTGTTCGCCGCACTGACCACGCt > 1:3638978/1‑35 (MQ=255) gAATGGGGGTTTTGTTCGCTGCACTGACCACGCtg > 1:10411277/1‑35 (MQ=255) gAATGGGGGTTTTGTTCGCCGCACTGACCACGCtg > 1:5553648/1‑35 (MQ=255) gAATGGGGGTTTTGTTCGCCGCACTGACCACGCtg > 1:16060936/1‑35 (MQ=255) gAATGGGGGTTTTGTTCGCCGCACTGACCACGCtg > 1:19341797/1‑35 (MQ=255) gAATGGGGGTTTTGTTCGCCGCACTGACCACGCtg > 1:8741708/1‑35 (MQ=255) aaTGGGGGTTTTGTTCGCCGCACTGACCACGCtgt < 1:11052555/35‑1 (MQ=255) aaTGGGGGTTTTGTTCGCCGCACTGACCACGCtgt < 1:13879650/35‑1 (MQ=255) atgGGGGTTTTGTTCGCCGCACTGACCACGCtgtg > 1:15838230‑M2/4‑35 (MQ=255) atgGGGGTTTTGTTCGCCGCACTGACCACGCtgtg < 1:4121553‑M2/32‑1 (MQ=255) atgGGGGTTTTGTTCGCCGCACTGACCACGCtgtg > 1:18201691‑M2/4‑35 (MQ=255) atgGGGGTTTTGTTCGCCGCACTGACCACGCtgtg > 1:16979533‑M2/4‑35 (MQ=255) tgGGGGTTTTGTTCGCCGCACTGACCACGCTGTGc < 1:3352591‑M2/33‑1 (MQ=255) ggggTTTTGTTCGCCGCACTGACCACGCTGTGCAt > 1:5711038/1‑35 (MQ=255) ggggTTTTGTTCGCCGCACTGACCACGCTGTGCAt < 1:17560526/35‑1 (MQ=255) ggggTTTTGTTCGCCGCACTGACCACGCTGTGCAt < 1:17389236/35‑1 (MQ=255) | TTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGTTTTGTTCGCCGCACTGACCACGCTGTGCAT > REL606/2525693‑2525761 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |