Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 1,776,434 | IS150 (–) +4 bp | 56.9% | intergenic (‑225/+56) | pheS ← / ← pheM | phenylalanyl‑tRNA synthetase alpha subunit/phenylalanyl‑tRNA synthetase operon leader peptide |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1776434 = | 33 (0.390) | 48 (0.470) | 28/48 | NT | 54.8% | intergenic (‑225/+59) | pheS/pheM | phenylalanyl‑tRNA synthetase alpha subunit/phenylalanyl‑tRNA synthetase operon leader peptide |
? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 1776437 | 33 (0.390) | 39 (0.380) | 21/48 | NT | 49.6% | intergenic (‑228/+56) | pheS/pheM | phenylalanyl‑tRNA synthetase alpha subunit/phenylalanyl‑tRNA synthetase operon leader peptide |
? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
AGAAACGGAAAACAGCGCCTGAAAGCCTCCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1776467‑1776434 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATG < REL606/2775877‑2775845 AGAAACGGAAAACAGCGCCTGAAAGCCTCCCAGTT > 1:3499410/1‑35 AGAAACGGAAAACAGCGCCTGAAAGCCTCCCAGTT > 1:13382987/1‑35 GAAACGGAAAACAGCGCCTGAAAGCCTCCCAGTTG > 1:7770015/1‑35 AACGGAAAACAGCGCCTGAAAGCCTCCCAGTTGTA > 1:1008219/1‑35 ACGGAAAACAGCGCCTGAAAGCCTCCCAGTTGTAC > 1:13886275/1‑35 CGGAAAACAGCGCCTGAAAGCCTCCCAGTTGTACT > 1:4107304/1‑35 GAAAACAGCGCCTGAAAGCCTCCCAGTTGTACTGC > 1:20014316/1‑35 AAAACAGCGCCTGAAAGCCTCCCAGTTGTACTGCA > 1:16349392/1‑35 aacCAGCGCCTGAAAGCCTCCCAGTTGTACTGCAC < 1:11451836/32‑1 AAACAGCGCCTGAAAGCCTCCCAGTTGTACTGCAC > 1:11572961/1‑35 AAACAGCGCCTGAAAGCCTCCCAGTTGTACTGCAC > 1:659176/1‑35 AAACAGCGCCTGAAAGCCTCCCAGTTGTACTGCAC > 1:10104064/1‑35 ccCAGCGCCTGAAAGCCTCCCAGTTGTACTGCACC < 1:8014551/33‑1 AACAGCGCCTGAAAGCCTCCCAGTTGTACTGCACC > 1:5921708/1‑35 ACAGCGCCTGAAAGCCTCCCAGTTGTACTGCACCC > 1:7125492/1‑35 CAGCGCCTGAAAGCCTCCCAGTTGTACTGCACCCA < 1:12710659/35‑1 agaGCCTGAAAGCCTCCCAGTTGTACTGCACCCAT < 1:13210495/32‑1 agaGCCTGAAAGCCTCCCAGTTGTACTGCACCCAT < 1:10810237/32‑1 AGCGCCTGAAAGCCTCCCAGTTGTACTGCACCCAT < 1:8819443/35‑1 AGCGCCTGAAAGCCTCCCAGTTGTACTGCACCCAT > 1:9109227/1‑35 CGCCTGAAAGCCTCCCAGTTGTACTGCACCCATTT < 1:16843045/35‑1 CGCCTGAAAGCCTCCCAGTTGTACTGCACCCATTT > 1:468877/1‑35 CGCCTGAAAGCCTCCCAGTTGTACTGCACCAATTT < 1:10434124/35‑1 GCCTGAAAGCCTCCCAGTTGTACTGCACCCATTTT > 1:9690188/1‑35 GCCTGAAAGCCTCCCAGTTGTACTGCACCCATTTT < 1:12949700/35‑1 CCTGAAAGCCTCCCAGTTGTACTGCACCCATTTTG < 1:16379508/35‑1 CTGAAAGCCTCCCAGTTGTACTGCACCCATTTTGT > 1:17280777/1‑35 CTGAAAGCCTCCCAGTTGTACTGCACCCATTTTGT > 1:20185684/1‑35 CTGAAAGCCTCCCAGTTGTACTGCACCCATTTTGT > 1:6182024/1‑35 TGAAAGCCTCCCAGTTGTACTGCACCCATTTTGTT < 1:5342613/35‑1 TGAAAGCCTCCCAGTTGTACTGCACCCATTTTGTT < 1:2657914/35‑1 TGAAAGCCTCCCAGTTGTACTGCACCCATTTTGTT > 1:2040510/1‑35 TGAAAGCCTCCCAGTTGTACTGCACCCATTTTGTT > 1:7639501/1‑35 TGAAAGCCTCCCAGTTGTACTGCACCCATTTTGTT < 1:1546505/35‑1 GAAAGCCTCCCAGTTGTACTGCACCCATTTTGTTG > 1:5409188/1‑35 GAAAGCCTACCAGTTGTACTGCACCCATTTTGTTG < 1:3100739/35‑1 AAGCCTCCCAGTTGTACTGCACCCATTTTGTTGGA > 1:20212648/1‑35 AAGCCTCCCAGTTGTACTGCACCCATTTTGTTGGA < 1:913584/35‑1 AAGCCTCCCAGTTGTACTGCACCCATTTTGTTGGA > 1:11142578/1‑35 AAGCCTCCCAGTTGTACTGCACCCATTTTGTTGGA < 1:12015480/35‑1 AAGCCTCCCAGTTGTACTGCACCCATTTTGTTGGA > 1:3814220/1‑35 AGCCTCCCAGTTGTACTGCACCCATTTTGTTGGAC > 1:11854333/1‑35 AGCCTCCCAGTTGTACTGCACCCATTTTGTTGGAC > 1:1654441/1‑35 GCCTCCCAGTTGTACTGCACCCATTTTGTTGGACG < 1:10999161/35‑1 GCCTCCCAGTTGTACTGCACCCATTTTGTTGGACG < 1:15298498/35‑1 GCCTCCCAGTTGTACTGCACCCATTTTGTTGGACG < 1:19418512/35‑1 GCCTCCCAGTTGTACTGCACCCATTTTGTTGGACG < 1:18670360/35‑1 CCTCCCAGTTGTACTGCACCCATTTTGTTGGACGA < 1:3966370/35‑1 CCTCCCAGTTGTACTGCACCCATTTTGTTGGACGA > 1:4284606/1‑35 CCTCCCAGTTGTACTGCACCCATTTTGTTGGACGA < 1:9345312/35‑1 TCCCAGTTGTACTGCACCCATTTTGTTGGACGATG < 1:15477130/35‑1 TCCCAGTTGTACTGCACCCATTTTGTTGGACGATG > 1:8575115/1‑35 CCCAGTTGTACTGCACCCATTTTGTTGGACGATGA > 1:3613682/1‑35 CCAGTTGTACTGCACCCATTTTGTTGGACGATGAA > 1:9541214/1‑35 CAGTTGTACTGCACCCATTTTGTTGGACGATGAAA > 1:3946520/1‑35 CAGTTGTACTGCACCCATTTTGTTGGACGATGAAA > 1:13709553/1‑35 AGTTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:9566091/1‑35 AGTTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:20425139/1‑35 AGTTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:3467691/1‑35 AGTTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:13334248/1‑35 AGTTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:1428854/35‑1 AGTTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:6087214/1‑35 GTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:8270235/35‑1 GTTGTACTGCACCCATTTTGTTGGACGATGAAATG > 1:2241857/1‑35 GTTGTACTGCACCCATTTTGTTGGACGATGAAATG > 1:145136/1‑35 GTTGTACTGCACCCATTTTGTTGGACGATGAAATG > 1:14793235/1‑35 GTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:3841997/35‑1 GTTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:978435/35‑1 GTTGTACTGCACCCATTTTGTTGGACGATCAAATG > 1:15488037/1‑35 AGAAACGGAAAACAGCGCCTGAAAGCCTCCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1776467‑1776434 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATG < REL606/2775877‑2775845 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |