New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1133033 =122 (1.190)8 (0.100) 3/38 NT 9.4% coding (13/576 nt) yceI hypothetical protein
?REL606 = 2612120 57 (0.700)intergenic (‑323/+253) yfhK/purL predicted sensory kinase in two‑component system/phosphoribosylformylglycinamidine synthase

CGTCATCTGACTATGGAGTATAAAAAATGAAAAAAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/1133071‑1133033
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagccATAAATCCCTCAAAGCAACGTATAATCAGTACGT  <  REL606/2612120‑2612087
                                                                         
CGTCATCTGACTATGGAGTATAAAAAATGAAAAAA                                        <  1:14143775/35‑1
 GTCATCTGACTATGGAGTATAAAAACTGAAAAAAc                                       >  1:8510847/1‑34
 GTCATCTGACTATGGAGTATAAAAAATGAAAAAAA                                       >  1:7556145/1‑35
 GTCATCTGACTATGGAGTATAAAAAATGAAAAAAA                                       <  1:12481173/35‑1
  TCATCTGACTATGGAGTATAAAAAATGAAAAAAAG                                      >  1:19829965/1‑35
  TCATCTGACTATGGAGTATAAAAAATGAAAAAAAG                                      >  1:2268510/1‑35
  TCATCTGACTATGGAGTATAAAAAATGAAAAAAAG                                      >  1:14910757/1‑35
  TCATCTGACTATGGAGTATAAAAAATGAAAAAAAG                                      >  1:17071930/1‑35
  TCATCTGACTATGGAGTATAAAAAATGAAAAAAAG                                      <  1:13355973/35‑1
   CATCTGACTATGGAGTATAAAAAATGAAAAAAAGC                                     >  1:1343310/1‑35
   CATCTGACTATGGAGTATAAAAAATGAAAAAAAGC                                     <  1:5157626/35‑1
    ATCTGACTATGGAGTATAAAAAATGAAAAAAAGCC                                    <  1:5160722/35‑1
    ATCTGACTATGGAGTATAAAAAATGAAAAAAAGCC                                    >  1:9214216/1‑35
    ATCTGACTATGGAGTATAAAAAATGAAAAAAAGCC                                    <  1:17201071/35‑1
                      AAAAAAGAAAAAAAGCCATAAATCCCTCAAAGCAA                  <  1:6609305/35‑1
                       AAAAGGAAAAAAAGCCATAAATCCCTCAAAGCAAC                 <  1:3636938/35‑1
                       AAAAAGAAAAAAAGCCATAAATCCCTCAAAGCAAC                 <  1:11508052/35‑1
                          aaGAAAAAAAGCCATAAATCCCTCAAAGCAACGTA              <  1:12889428/33‑1
                           aGAAAAAAAGCCATAAATCCCTCAAAGCAACGTAT             <  1:3955828/34‑1
                           aGAAAAAAAGCCATAAATCCCTCAAAGCAACGTAT             <  1:10856486/34‑1
                           aGAAAAAAAGCCATAAATCCCTCAAAGCAACGTAT             <  1:722542/34‑1
                            aAAAAAAAGCCATAAATCCCTCAAAGCAACGTATA            <  1:8526495/34‑1
                            GAAAAAAAGCCATAAATCCCTCAAAGCAACGTATA            <  1:5592737/35‑1
                             AAAAAAAGCCATAAATCCCTCAAAGCAACGTATAA           <  1:13190845/35‑1
                             AAAAAAAGCCATAAATCCCTCAAAGCAACGTATAA           <  1:13729719/35‑1
                               AAAAAGCCATAAATCCCTCAAAGCAACGTATAATC         <  1:7326927/35‑1
                                 AAAGCCATAAATCCCTCAAAGCAACGTATAATCAG       <  1:6413201/35‑1
                                 AAAGCCATAAATCCCTCAAAGCAACGTATAATCAG       <  1:14744496/35‑1
                                 AAAGCCATAAATCCCTCAAAGCAACGTATAATCAG       <  1:9495571/35‑1
                                 AAAGCCATAAATCCCTAAAAGCAACGTATAATCAG       <  1:6205739/35‑1
                                  AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT      <  1:19155858/35‑1
                                  AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT      <  1:19197076/35‑1
                                  AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT      >  1:7545855/1‑35
                                  AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT      >  1:16752180/1‑35
                                  AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT      >  1:19992392/1‑35
                                  AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT      >  1:5782754/1‑35
                                  AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT      >  1:6948455/1‑35
                                  AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT      <  1:2068319/35‑1
                                  AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT      >  1:12408233/1‑35
                                  AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT      <  1:13174201/35‑1
                                  AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT      >  1:3216431/1‑35
                                  AAGCCATAAATCCCTCAAAGCAACGTATAATCAGT      <  1:13494436/35‑1
                                   AGCCATAAATCCCTCAAAGCAACGTATAATCAGTA     <  1:12957898/35‑1
                                   AGCCATAAATCCCTCAAAGCAACGTATAATCAGTA     >  1:15156338/1‑35
                                   AGCCATAAATCCCTCAAAGCAACGTATAATCAGTA     >  1:16309802/1‑35
                                    GCCATAAATCCCTCAAAGCAACGTATAATCAGTAC    >  1:896488/1‑35
                                    GCCATAAATCCCTCAAAGCAACGTATAATCAGTAC    <  1:487955/35‑1
                                    GCCATAAATCCCTCAAAGCAACGTATAATCAGTAC    <  1:15397599/35‑1
                                    GCCATAAATCCCTCAAAGCAACGTATAATCAGTAC    <  1:8219795/35‑1
                                     CCATAAATCCCTCAAAGCAACGTATAATCAGTACG   >  1:9400984/1‑35
                                     CCATAAATCCCTCAAAGCAACGTATAATCAGTACG   <  1:2407421/35‑1
                                     CCATAAATCCCTCAAAGCAACGTATAATCAGTACG   >  1:19586340/1‑35
                                     CCATAAATCCCTCAAAGCAACGTATAATCAGTACG   >  1:1752569/1‑35
                                     CCATAAATCCCTCAAAGCAACGTATAATCAGTACG   >  1:16990093/1‑35
                                     CCATAAATCCCTCAAAGCAACGTATAATCAGTACG   <  1:15737597/35‑1
                                     CCATAAATCCCTCAAAGCAACGTATAATCAGTACG   >  1:12842782/1‑35
                                     CCATAAATCCCTCAAAGCAACGTATAATCAGTACG   <  1:10952557/35‑1
                                     CCATAAATCCCTCAAAGCAACGTATAATCAGTACG   >  1:10481415/1‑35
                                      CATAAATCCCTCAAAGCAACGTATAATCAGTACGT  <  1:2836218/35‑1
                                      CATAAATCCCTCAAAGCAACGTATAATCAGTACGT  <  1:20117649/35‑1
                                      CATAAATCCCTCAAAGCAACGTATAATCAGTACGT  <  1:15811912/35‑1
                                      CATAAATCCCTCAAAGCAACGTATAATCAGTACGT  <  1:15036953/35‑1
                                      CATAAATCCCTCAAAGCAACGTATAATCAGTACGT  >  1:13247454/1‑35
                                      CATAAATACCTCAAAGCAACGTATAATCAGTACGT  <  1:20202323/35‑1
                                                                         
CGTCATCTGACTATGGAGTATAAAAAATGAAAAAAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/1133071‑1133033
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagccATAAATCCCTCAAAGCAACGTATAATCAGTACGT  <  REL606/2612120‑2612087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.