New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1858460 | 47 (0.460) | 4 (0.050) | 4/40 | NT | 6.2% | intergenic (+227/+239) | insL‑4/yeaS | putative transposase insL for insertion sequence IS186/neutral amino‑acid efflux system |
? | REL606 | = 4005717 | 82 (0.960) | intergenic (+18/+265) | fre/fadA | NAD(P)H‑flavin reductase/acetyl‑CoA acetyltransferase |
Only 100 of 110 total aligned reads displayed.
CCTTTATCAAGATGACGTTCGAATATGCCGGCAGGCGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGC > REL606/1858426‑1858494 | ccTTTATCAAGATGACGTTCGAATATGCCGGCAGG > 1:3907969‑M1/1‑35 (MQ=255) ccTTTATCAAGATGACGTTCGAATATGCCGGCAGG < 1:5407566‑M1/35‑1 (MQ=255) ccTTTATCAAGATGACGTTCGAATATGCCGGCAGG > 1:12272256‑M1/1‑35 (MQ=255) ccTTTATCAAGATGACGTTCGAATATGCCGGCAGG > 1:12714775‑M1/1‑35 (MQ=255) cTTTATCAAGATGACGTTCGAATATGCCGGCAGgc < 1:1537688/35‑1 (MQ=255) cTTTATCAAGATGACGTTCGAATATGCCGGCAGgc < 1:290898/35‑1 (MQ=255) cTTTATCAAGATGACGTTCGAATATGCCGGCAGgc < 1:13730210/35‑1 (MQ=255) cTTTATCAAGATGACGTTCGAATATGCCGGCAGGg > 1:20111443‑M1/1‑34 (MQ=255) cTTTATCAAGATGACGTTCGAATATGCCGGCAGGg > 1:6065362‑M1/1‑34 (MQ=255) cTTTATCAAGATGACGTTCGAATATGCCGGCAGGg > 1:11634500‑M1/1‑34 (MQ=255) cTTTATCAAGATGACGTTCGAATATGCCGGCAGGg > 1:13105805‑M1/1‑34 (MQ=255) tttATCAAGATGACGTTCGAATATGCCGGCAGGgg > 1:18622510‑M1/1‑33 (MQ=255) tttATCAAGATGACGTTCGAATATGCCGGCAGGgg > 1:10199156‑M1/1‑33 (MQ=255) ttgtCAAGATGCCGTTCGAATATGCCGGCAGgcgc < 1:15281776/32‑1 (MQ=38) ttATCAAGATGACGTTCGAATATGCCGGCAGgcgc < 1:17399954/35‑1 (MQ=255) ttATCAAGATGACGTTCGAATATGCCGGCAGgcgc < 1:13513393/35‑1 (MQ=255) tATCAAGATGACGTTCGAATATGCCGGCAGGgggg > 1:1807498‑M1/1‑31 (MQ=255) tATCAAGATGACGTTCGAATATGCCGGCAGGgggg > 1:15109733‑M1/1‑31 (MQ=255) tATCAAGATGACGTTCGAATATGCCGGCAGGCGCa < 1:972438/35‑1 (MQ=255) tATCAAGATGACGTTCGAATATGCCGGCAGGCGCa < 1:19291163/35‑1 (MQ=255) tATCAAGATGACGTTCGAATATGCCGGCAGGCGCa < 1:8475232/35‑1 (MQ=255) tCAAGATGACGTTCGAATATGCCGGCAGGgggggg > 1:16737928‑M1/1‑29 (MQ=255) tCAAGATGACGTTCGAATATGCCGGCAGGCGCAgt < 1:20019967/35‑1 (MQ=255) cAAGATGACGTTCGAATATGCCGGCAGGggggggt > 1:16525653‑M1/1‑28 (MQ=255) cAAGATGACGTTCGAATATGCCGGCAGGCGCAgtt < 1:19776401/35‑1 (MQ=255) aaGATGACGTTCGAATATGCAGGCAGGCGCAgttt < 1:5815204/35‑1 (MQ=255) aGATGACGTTCGAATATGCCGGCAGGCGCAgtttg < 1:11305998/35‑1 (MQ=255) gATGACGTTCGAATATGCCGGCAGGCGCAgtttgt < 1:19701735/35‑1 (MQ=255) aTGACGGTCGAATATGCCGGCAGGCGCAgtttgtt < 1:5618628/35‑1 (MQ=255) tGACGTTCGAATATGCCGGCAGGggggggtttttt > 1:6784187‑M1/1‑23 (MQ=255) tGACGTTCGAATATGCCGGCAGGCGCAgtttgttt < 1:6745501/35‑1 (MQ=255) tGACGTTCGAATATGCCGGCAGGCGCAgtttgttt < 1:4662860/35‑1 (MQ=255) gACGTTCGAATATGCCGGCAGGggcggggtttttt > 1:3654293‑M1/1‑22 (MQ=255) cGTTCGAATATGCCGGCAGGCGCAGTTTGTTTAtt < 1:3969170/35‑1 (MQ=255) cGTTCGAATATGCCGGCAGGCGCAGTTTGTTTAtt < 1:12959260/35‑1 (MQ=255) gTTCGAATATGCCGGCAGGCGCAGTTTGTTTATTc < 1:11070090/35‑1 (MQ=255) gTTCGAATATGCCGGCAGGCGCAGTTTGTTTATTc < 1:18013171/35‑1 (MQ=255) ttCGAATATGCCGGCAGGCGCAGTTTGTTTATTcc < 1:15761352/35‑1 (MQ=255) tCGAATATGCCGGCAGGCGCAGTTTGTTTATTCCa < 1:9906541/35‑1 (MQ=255) tCGAATATGCCGGCAGGCGCAGTTTGTTTATTCCa < 1:15770818/35‑1 (MQ=255) cGAATATGCCGGCAGGCGCAGTTTGTTTATTCCAg < 1:9246633/35‑1 (MQ=255) taaTATGCCGGCAGGCGCAGTTTGTTTATTCCAGa < 1:9715725/34‑1 (MQ=255) gAATATGCCGGCAGGCGCAGTTTGTTTATTCCAGa < 1:10127423/35‑1 (MQ=255) gAATATGCCGGCAGGCGCAGTTTGTTTATTCCAGa < 1:9549122/35‑1 (MQ=255) aaTATGCCGGCAGGCGCAGTTTGTTTATTCCAGaa < 1:19898061/35‑1 (MQ=255) aaTATGCCGGCAGGCGCAGTTTGTTTATTCCAGaa < 1:6668015/35‑1 (MQ=255) atatGCCGGCAGGCGCAGTTTGTTTATTCCAGaaa < 1:842341/35‑1 (MQ=255) atatGCCGGCAGGCGCAGTTTGTTTATTCCAGaaa < 1:11156873/35‑1 (MQ=255) atatGCCGGCAGGCGCAGTTTGTTTATTCCAGaaa < 1:3614253/35‑1 (MQ=255) atatGCCGGCAGGCGCAGTTTGTTTATTCCAGaaa < 1:15050774/35‑1 (MQ=255) tatGCCGGCAGGCGCAGTTTGTTTATTCCAGAAAg < 1:16725027/35‑1 (MQ=255) tatGCCGGCAGGCGCAGTTTGTTTATTCCAGAAAg < 1:8428198/35‑1 (MQ=255) atGCCGGCAGGCGCAGTTTGTTTATTCCAGAAAgg < 1:16486447/35‑1 (MQ=255) atGCCGGCAGGCGCAGTTTGTTTATTCCAGAAAgg < 1:19918672/35‑1 (MQ=255) tGCCGGCAGGCGCAGTTTGTTTATTCCAGAAAGGc < 1:11122255/35‑1 (MQ=255) tGCCGGCAGGCGCAGTTTGTTTATTCCAGAAAGGc < 1:12025019/35‑1 (MQ=255) tGCCGGCAGGCGCAGTTTGTTTATTCCAGAAAGGc < 1:8550421/35‑1 (MQ=255) gCCGGCAGGCGCAGTTTGTTTATTCCAGAAAGGCg < 1:1778933/35‑1 (MQ=255) ccGGCAGGCGCAGTTTGTTTATTCCAGAAAGGCGt < 1:13901282/35‑1 (MQ=255) ccGGCAGGCGCAGTTTGTTTATTCCAGAAAGGCGt < 1:17083763/35‑1 (MQ=255) cGGCAGGCGCAGTTTGTTTATTCCAGAAAGGCGtt < 1:1608730/35‑1 (MQ=255) cGGCAGGCGCAGTTTGTTTATTCCAGAAAGGCGtt < 1:9553514/35‑1 (MQ=255) cGGCAGGCGCAGTTTGTTTATTCCAGAAAGGCGtt < 1:18805393/35‑1 (MQ=255) cGGCAGGCGCAGTTTGTTTATTCCAGAAAGGCGtt < 1:829687/35‑1 (MQ=255) ggCAGGCGCAGTTTGTTTATTCCAGAAAGGCGTTg < 1:17049625/35‑1 (MQ=255) ggCAGGCGCAGTTTGTTTATTCCAGAAAGGCGTTg < 1:9445540/35‑1 (MQ=255) ggCAGGCGCAGTTTGTTTATTCCAGAAAGGCGTTg < 1:4199158/35‑1 (MQ=255) gCAGGCGCAGTTTGTTTATTCCAGAAAGGCGTTGa > 1:14020940/1‑35 (MQ=255) gCAGGCGCAGTTTGTTTATTCCAGAAAGGCGTTGa < 1:17969586/35‑1 (MQ=255) gCAGGAGCAGTTTGTTTATTCCAGAAAGGCGTTGa < 1:2713631/35‑1 (MQ=255) cAGGggcgggtttttttatatctcagataaatgca < 1:19322201‑M1/35‑32 (MQ=255) cAGGggcgggtttttttatatctcagataaatgca < 1:19665124‑M1/35‑32 (MQ=255) cAGGggcgggtttttttatatctcagataaatgca < 1:10686218‑M1/35‑32 (MQ=255) cAGGggcgggtttttttatatctcagataaatgca < 1:2842485‑M1/35‑32 (MQ=255) cAGGggcgggtttttttatatctcagataaatgca < 1:707714‑M1/35‑32 (MQ=255) cAGGggcggggttttttatatctcagataaatgca > 1:18181900‑M1/1‑4 (MQ=255) aGGggcgggtttttttatatctcagataaatgcaa < 1:7857009‑M1/35‑33 (MQ=255) aGGggcgggtttttttatatctcagataaatgcaa < 1:8801755‑M1/35‑33 (MQ=255) aGGggcgggtttttttatatctcagataaatgcaa < 1:152013‑M1/35‑33 (MQ=255) aGGggcgggtttttttatatctcagataaatgcaa < 1:17832562‑M1/35‑33 (MQ=255) aGGggcgggtttttttatatctcagataaatgcaa < 1:13930057‑M1/35‑33 (MQ=255) aGGggcggggttttttatatctcagataaatgcaa > 1:10420658‑M1/1‑3 (MQ=255) aGGCGCAGTTTGTTTATTCCAGAAAGGCGTTGAgc > 1:11689241/1‑35 (MQ=255) ggggcgggtttttttatatctcagataaatgcaaa < 1:10027135‑M1/35‑34 (MQ=255) ggggcgggtttttttatatctcagataaatgcaaa < 1:1078738‑M1/35‑34 (MQ=255) ggggcgggtttttttatatctcagataaatgcaaa < 1:6153528‑M1/35‑34 (MQ=255) ggCGCAGTTTGTTTATTCCAGAAAGGCGTTGAgcg < 1:3840802/35‑1 (MQ=255) ggCGCAGTTTGTTTATTCCAGAAAGGCGTTGAgcg < 1:9481678/35‑1 (MQ=255) ggCGCAGTTTGTTTATTCCAGAAAGGCGTTGAgcg > 1:17411849/1‑35 (MQ=255) gggcgggtttttttatatctcagataaatgcaaac < 1:16859067‑M1/35‑35 (MQ=255) gggcgggtttttttatatctcagataaatgcaaac < 1:460271‑M1/35‑35 (MQ=255) gggcgggtttttttatatctcagataaatgcaaac > 1:377462‑M1/1‑1 (MQ=255) gggcgggtttttttatatctcagataaatgcaaac < 1:14188472‑M1/35‑35 (MQ=255) gggcgggtttttttatatctcagataaatgaaaac < 1:4677017‑M1/35‑35 (MQ=255) gggcgggtttttttatatcacagataaatgcaaac < 1:3809844‑M1/35‑35 (MQ=255) gggcgggcttttttatatctcagataaatgcaaac > 1:13915176‑M1/1‑1 (MQ=255) gggagggtttttttatatctcagataaatgcaaac < 1:19926013‑M1/35‑35 (MQ=255) gcgcAGTTTGTTTATTCCAGAAAGGCGTTGAgcgc > 1:5873203/1‑35 (MQ=255) gcgcAGTTTGTTTATTCCAGAAAGGCGTTGAgcgc < 1:13095990/35‑1 (MQ=255) gcgcAGTTTGTTTATTCCAGAAAGGCGTTGAgcgc > 1:929780/1‑35 (MQ=255) | CCTTTATCAAGATGACGTTCGAATATGCCGGCAGGCGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGC > REL606/1858426‑1858494 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |