New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1249678 = | 70 (0.680) | 6 (0.090) | 4/30 | NT | 11.3% | coding (230/633 nt) | dhaL | dihydroxyacetone kinase, C‑terminal domain |
? | REL606 | 1306336 = | 50 (0.780) | intergenic (‑97/+274) | cls/kch | cardiolipin synthetase/voltage‑gated potassium channel |
TCATTCTCAAGAATACCGGTATGACGCTGCTTTCCAGCGTCGG‑‑‑‑‑‑‑‑‑ < REL606/1249720‑1249678 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgtcggGGGCGGGGG > REL606/1306336‑1306344 tgATTCTCAAGAATACCGGTATGACGCTGCTTTCC < 1:5694811/33‑1 TCATTCTCAAGAATACCTGTATGACGCTGCTTTCC > 1:14795953/1‑35 TCATTCTCAAGAATACCGGTATGACGCTGCTTTCC > 1:8546495/1‑35 TCATTCTCAAGAATACCGGTATGACGCTGCTTTCC < 1:18806597/35‑1 TCATTCTCAAGAATACCGGTATGACGCTGCTTTCC < 1:10845086/35‑1 TCATTCTCAAGAATACCGGTATGACGCTGCTTTCC < 1:4225603/35‑1 TCATTCTCAAGAATACCGGTATGACGCTGCTTTCC < 1:16659765/35‑1 TCATTCTCAAGAATACCGGTATGACGCTGCTTTCC > 1:12217323/1‑35 CATTCTCAAGAATACCGGTATGACGCTGCTTTCCA < 1:10613527/35‑1 CATTCTCAAGAATACCGGTATGACGCTGCTTTCCA < 1:9552949/35‑1 CATTCTCAAGAATACCGGTATGACGCTGCTTTCCA < 1:9273390/35‑1 CATTCTCAAGAATACAGGTATGACGCTGCTTTCCA < 1:10703207/35‑1 ATTCTCAAGAATACCGGTATGACGCTGCTTTCCAG > 1:5432229/1‑35 ATTCTCAAGAATACCGGTATGACGCTGCTTTCCAG < 1:14713442/35‑1 ATTCTCAAGAATACCGGTATGACGCTGCTTTCCAG < 1:993136/35‑1 ATTCTCAAGAATACCGGTATGACGCTGCTTTCCAG < 1:11237113/35‑1 TTCTCAAGAATACCGGTATGACGCTGCTTTCCAGC > 1:2539533/1‑35 TTCTCAAGAATACCGGTATGACGCTGCTTTCCAGC > 1:10829330/1‑35 TTCTCAAGAATACCGGTATGACGCTGCTTTCCAGC > 1:16248802/1‑35 TTCTCAAGAATACCGGTATGACGCTGCTTTCCAGC < 1:2949627/35‑1 TTCTCAAGAATACCGGTATGACGCTGCTTTCCAGC < 1:2940822/35‑1 TTCTCAAGAATACCGGTATGACGCTGCTTTCCAGC < 1:5119045/35‑1 TTCTCAAGAATACCGGTATGACGCTGCTTTCAAGC < 1:3031244/35‑1 TCTCAAGAATACCGGTATGACGCTGCTTTCCAGCG > 1:9119374/1‑35 TCTCAAGAATACCGGTATGACGCTGCTTTCCAGCG < 1:11498349/35‑1 TCTCAAGAATACCGGTATGACGCTGCTTTCCAGCG < 1:13369342/35‑1 TCTCAAGAATACCGGTATGACGCTGCTTTCCAGCG > 1:8716797/1‑35 CTCAAGAATACCGGTATGACGCTGCTTTCCAGCGT < 1:5353179/35‑1 CTCAAGAATACCGGTATGACGCTGCTTTCCAGCGT > 1:17006160/1‑35 CTCAAGAATACCGGTATGACGCTGCTTTCCAGCGT < 1:557951/35‑1 CTCAAGAATACCGGTATGACGCTGCTTTCCAGCGT < 1:12649994/35‑1 TCAAGAATACCGGTATGACGCTGGTTTCCAGCGTC > 1:8104574/1‑35 TCAAGAATACCGGTATGACGCTGCTTTCCAGCGTC > 1:19649350/1‑35 TCAAGAATACCGGTATGACGCTGCTTTCCAGCGTC > 1:19247541/1‑35 TCAAGAATACCGGTATGACGCTGCTTTCCAGCGTC > 1:16911406/1‑35 TCAAGAATACCGGTATGACGCTGCTTTCCAGCGTC > 1:3186563/1‑35 CAAGAATACCGGTATGACGCTGCTTTCCAGCGTCG > 1:8559480/1‑35 CAAGAATACCGGTATGACGCTGCTTTCCAGCGTCG < 1:8481619/35‑1 CAAGAATACCGGTATGACGCTGCTTTCCAGCGTCG < 1:6458736/35‑1 CAAGAATACCGGTATGACGCTGCTTTCCAGCGTCG > 1:14068199/1‑35 tctAATACCGGTATGACGCTGCTTTCCAGCGTCGG < 1:11926943/32‑1 AAGAATACCGGTATTACGCTGCTTTCCAGCGTCGG > 1:3743742/1‑35 AAGAATACCGGTATGACGCTGCTTTCCAGCGTCGG < 1:180446/35‑1 AAGAATACCGGTATGACGCTGCTTTCCAGCGTCGG > 1:17930958/1‑35 AAGAATACCGGTATGACGCTGCTTTCCAGCGTCGG > 1:16642122/1‑35 AAGAATACCGGTATGACGCTGCTTTCCAGCGTCGG < 1:16279669/35‑1 AGAATACCGGTATGACGCTGCTTTCCAGCGTCGGG > 1:2335478/1‑35 AGAATACCGGTATGACGCTGCTTTCCAGCGTCGGG > 1:8835007/1‑35 GAATACCGGTATGACGCTGCTTTCCAGCGTCGGGG > 1:18663670/1‑35 GAATACCGGTATGACGCTGCTTTCCAGCGTCGGGG > 1:18318876/1‑35 GAATACCGGTATGACGCTGCTTTCCAGCGTCGGGG > 1:14439876/1‑35 AATACCGGTATGACGCTTCTTTCCAGCGTCGGGGG > 1:19743269/1‑35 ATACCGGTATGACGCTGCTTTCCAGCGTCGGGGGg > 1:6975829/1‑34 ATACCGGTATGACGCTGCTTTCCAGCGTCGGGGGg > 1:3710887/1‑34 ATACCGGTATGACGCTGCTTTCCAGCGTCGGGGGg > 1:1856063/1‑34 TACCGGTATGACGCTGCTTTCCAGCGTCGGGGGgg > 1:3110524/1‑33 TACCGGTATGACGCTGCTTTCCAGCGTCGGGGGgg > 1:14609417/1‑33 ACCGGTATGACGCTGCTTTCCAGCGTCGGGGGGGG > 1:8850295/1‑35 CCGGTATGACGCTGCTTTCCAGCGTCGGGGGGGGG > 1:5593768/1‑35 CGGTATGACGCTGCTTTCCAGCGTCGGGGGGGGGG > 1:3996491/1‑35 CGGTATGACGCTGCTTTCCAGCGTCGGGGGGGGGG > 1:1024315/1‑35 GGTATGACGCTGCTTTCCAGCGTCGGGGGGGGGGG > 1:4667686/1‑35 GGTATGACGCTGCTTTCCAGCGTCGGGGGGGGGGG > 1:10827774/1‑35 TCATTCTCAAGAATACCGGTATGACGCTGCTTTCCAGCGTCGG‑‑‑‑‑‑‑‑‑ < REL606/1249720‑1249678 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgtcggGGGCGGGGG > REL606/1306336‑1306344 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |