New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1349554 = | 66 (0.640) | 10 (0.130) | 4/36 | NT | 18.6% | intergenic (‑146/+222) | fabI/ycjD | enoyl‑(acyl carrier protein) reductase/hypothetical protein |
? | REL606 | = 3574369 | 38 (0.490) | coding (1504/2043 nt) | prlC | oligopeptidase A |
Only 100 of 119 total aligned reads displayed.
TCAGGCTCCCAGCACCAGTTTTCCATAAACTGACTCGGCAGTTCGACCGCATCCCACGGCACCCCACTG > REL606/3574335‑3574403 | tCAGGCTCCCAGCACCAGTTTTCCATAAACTGACt < 1:12514356/35‑1 (MQ=255) tCAGGCTCCCAGCACCAGTTTTCCATAAACTGACt > 1:17649682/1‑35 (MQ=255) tCAGGCTCCCAGCACCAGTTTTCCATAAACTGACt < 1:8056449/35‑1 (MQ=255) tCAGGCTCCCAGCACCAGTTTTCCATAAACTGACt > 1:2461103/1‑35 (MQ=255) cAGGCTCCCAGCACCAGTTTTCCATAAACTGACTc < 1:17822143‑M2/35‑2 (MQ=255) cAGGCTCCCAGCACCAGTTTTCCATAAACTGACTc < 1:594455‑M2/35‑2 (MQ=255) aGTCTCCCAGCACCAGTTTTCCATAAACTGACTcg > 1:315647‑M2/1‑33 (MQ=255) aGGCTCCCAGCACCAGTTTTCCATAAACTGACTcg > 1:17175787‑M2/1‑33 (MQ=255) aGGCTCCCAGCACCAGTTTTCCATAAACTGACTcg > 1:12819623‑M2/1‑33 (MQ=255) aGGCTCCCAGCACCAGTTTTCCATAAACTGACTcg < 1:16756993‑M2/35‑3 (MQ=255) aGGCTCCCAGCACCAGTTTTCCATAAACTGACTcg < 1:4473084‑M2/35‑3 (MQ=255) aGGCTCCCAGCACCAGTTTTCCATAAACTGACTcg < 1:14458484‑M2/35‑3 (MQ=255) aGGCTCCCAGCACCAGTTTTCCATAAACTGACTcg < 1:8409355‑M2/35‑3 (MQ=255) aGGATCCCAGCACCAGTTTTCCATAAACTGACTcg > 1:9295601‑M2/1‑33 (MQ=255) ggCTCCCAGCACCAGTTTTCCATAAACTGACTcgg > 1:11599565‑M2/1‑32 (MQ=255) ggCTCCCAGCACCAGTTTTCCATAAACTGACTcgg > 1:15584467‑M2/1‑32 (MQ=255) gCTCCCAGCACCAGTTTTCCATAAACTGACTcggc < 1:13374989‑M2/35‑5 (MQ=255) gCTCCCAGCACCAGTTTTCCATAAACTGACTcggc > 1:1413067‑M2/1‑31 (MQ=255) gCTCCCAGCACCAGTTTTCCATAAACTGACTcggc > 1:20278243‑M2/1‑31 (MQ=255) gCTCCCAGCACCAGTTTTCCATAAACTGACTcggc > 1:335257‑M2/1‑31 (MQ=255) cTCCCAGCACCAGTTTTCCATAAACTGACTcggca < 1:12985701‑M2/35‑6 (MQ=255) cTCCCAGCACCAGTTTTCCATAAACTGACTcggca < 1:8262611‑M2/35‑6 (MQ=255) tCCCAGCACCAGTTTTCCATAAACTGACTcggcag < 1:20057103‑M2/35‑7 (MQ=255) cccAGCACCAGTTTTCCATAAACTGACTcggcagg < 1:15692893‑M2/35‑8 (MQ=255) cccAGCACCAGTTTTCCATAAACTGACTCGGCAGt < 1:7294129/35‑1 (MQ=255) cccAGCACCAGTTTTCCATAAACTGACTCGGCAGt < 1:8045856/35‑1 (MQ=255) cccAGCACCAGTTTTCCATAAACTGACTCGGCAGt < 1:10108670/35‑1 (MQ=255) ccAGCACCAGTTTTCCATAAACTGACTcggcaggg < 1:9237841‑M2/35‑9 (MQ=255) ccAGCACCAGTTTTCCATAAACTGACTcggcaggg < 1:10632633‑M2/35‑9 (MQ=255) ccAGCACCAGTTTTCCATAAACTGACTcggcaggg < 1:4546702‑M2/35‑9 (MQ=255) ccAGCACCAGTTTTCCATAAACTGACTCGGCAGtt < 1:7128632/35‑1 (MQ=255) ccAGCACCAGTTTTCCATAAACTGACTCGGCAGtt < 1:18599467/35‑1 (MQ=255) cAGCACCAGTTTTCCATAAACTGACTcggcagggg < 1:4121101‑M2/35‑10 (MQ=255) cAGCACCAGTTTTCCATAAACTGACTCGGCAGTTc < 1:2234212/35‑1 (MQ=255) cAGCACCAGTTTTCCATAAACTGACTCGGCAGTTc < 1:10156433/35‑1 (MQ=255) cAGCACCAGTTTTCCATAAACTGACTCGGCAGTTc < 1:17662685/35‑1 (MQ=255) cAGCACCAGTTTTCCATAAACTGACTCGGCAGTTc < 1:11698682/35‑1 (MQ=255) cAGCACCAGTTTTCCATAAACTGACTCGGCAGTTc < 1:11024962/35‑1 (MQ=255) cAGCACCAGTTTTCCATAAACTGACTCGGCAGTTc < 1:17081025/35‑1 (MQ=255) aGCACCAGTTTTCCATAAACTGACTcggcaggggg < 1:19629439‑M2/35‑11 (MQ=255) aGCACCAGTTTTCCATAAACTGACTcggcaggggg < 1:8467093‑M2/35‑11 (MQ=255) gCACCAGTTTTCCATAAACTGACTcggcagggggg < 1:2716381‑M2/35‑12 (MQ=255) gCACCAGTTTTCCATAAACTGACTcggcagggggg < 1:754006‑M2/35‑12 (MQ=255) gCACCAGTTTTCCATAAACTGACTCGGCAGTTCGa < 1:19969960/35‑1 (MQ=255) gCACCAGTTTTCCATAAACTGACTCGGCAGTTCGa < 1:20541102/35‑1 (MQ=255) cACCAGTTTTCCATAAACTGACTcggcaggggtgg < 1:14999080‑M2/35‑13 (MQ=255) cACCAGTTTTCCATAAACTGACTcggcaggggggg < 1:11749451‑M2/35‑13 (MQ=255) cACCAGTTTTCCATAAACTGACTcggcaggggggg < 1:3555004‑M2/35‑13 (MQ=255) cACCAGTTTTCCATAAACTGACTCGGCAGTTCGAc < 1:5232919/35‑1 (MQ=255) cACCAGTTTTCCATAAACTGACTCGGCAGTTCGAc < 1:13205937/35‑1 (MQ=255) cACCAGTTTTCCATAAACTGACTCGGCAGTTCGAc < 1:13674900/35‑1 (MQ=255) aCCAGTTTTCCATAAACTGACTcggcagggggggg < 1:15511621‑M2/35‑14 (MQ=255) aCCAGTTTTCCATAAACTGACTcggcagggggggc < 1:17329054‑M2/35‑14 (MQ=255) aCCAGTTTTCCATAAACTGACTCGGCAGTTCGAcc < 1:20024699/35‑1 (MQ=255) aCCAGTTTTCCATAAACTGACTCGGCAGTTCGAcc < 1:15584931/35‑1 (MQ=255) ccAGTTTTCCATAAACTGACTcggcaggggggcgg < 1:13828613‑M2/35‑15 (MQ=255) ccAGTTTTCCATAAACTGACTCGGCAGTTCGACCg < 1:78974/35‑1 (MQ=255) ccAGTTTTCCATAAACTGACTCGGCAGTTCGACCg < 1:14930414/35‑1 (MQ=255) ccAGTTTTCCATAAACTGACTCGGCAGTTCGACCg < 1:5476469/35‑1 (MQ=255) ccAGTTTTCCATAAACTGACTCGGCAGTTCGACCg < 1:14209432/35‑1 (MQ=255) ccAGTGTTCCATAAACTGACTCGGCAGTTCGACCg < 1:12904508/35‑1 (MQ=255) cAGTTTTCCATAAACTGACTcggcagggggggcgg < 1:11568642‑M2/35‑16 (MQ=255) cAGTTTTCCATAAACTGACTcggcagggggggcgc < 1:7817516‑M2/35‑16 (MQ=255) gTTTTCCATAAACTGACTCGGCAGTTCGACCGCAt < 1:13902427/35‑1 (MQ=255) ttttCCATAAACTGACTcggcagggggggcgctcc < 1:13773806‑M2/35‑19 (MQ=255) ttttCCATAAACTGACTcggcagggggggcgcgtc < 1:1623841‑M2/35‑19 (MQ=255) tttcCCAAAACCTGACTCGGCAGTTCGACCGCATc < 1:10267740/35‑1 (MQ=25) ttCCATAAACTGACTCGGCAGTTCGACCGCATccc < 1:7053168/35‑1 (MQ=255) ccATAAACTGACTCGGCAGTTCGACCGCATCCCAc < 1:15130505/35‑1 (MQ=255) ccATAAACTGACTCGGCAGTTCGACCGCATCCCAc < 1:11309963/35‑1 (MQ=255) ccATAAACTGACTCGGCAGTTCGACCGCATCCCAc < 1:16048505/35‑1 (MQ=255) naTAAACTGACTCGGCAGTTCGACCGCATCCCACn < 1:14035652/34‑1 (MQ=255) cATAAACTGACTCTGCAGTTCGACCGCATCCCACg > 1:5635013/1‑35 (MQ=255) cATAAACTGACTCGGCAGTTCGACCGCATCCCACg < 1:11213977/35‑1 (MQ=255) aaaaaCTGACTCGGCAGTTCGACCGCATCCCACgg < 1:4426870/33‑1 (MQ=255) aTAAACTGACTCGGCAGTTCGACCGCATCCCATgg < 1:19116810/35‑1 (MQ=255) aTAAACTGACTCGGCAGTTCGACCGCATCCCACgg < 1:7169855/35‑1 (MQ=255) aTAAACTGACTCGGCAGTTCGACCGCATCCCACgg < 1:17967284/35‑1 (MQ=255) tAACCTGACTCGGCAGTTCGACCGCATCCCACGGc < 1:7985840/35‑1 (MQ=255) tAACCTGACTCGGCAGTTCGACCGCATCCCACGGc < 1:12033985/35‑1 (MQ=255) aaaCTGACTCGGCAGTTCGACCGCATCCCACGGCa < 1:19245766/35‑1 (MQ=255) aaCTGACTCGGAAGTTCGACCGCATCCCACGGCAc < 1:5186591/35‑1 (MQ=255) ccTGACTCGGCAGTTCGACCGCATCCCACGGCAcc < 1:5119855/34‑1 (MQ=255) ccTGACTCGGCAGTTCGACCGCATCCCACGGCAcc < 1:15737832/34‑1 (MQ=255) aCTGACTCGGCAGTTCGACCGCATCCCACGGCAcc < 1:18532744/35‑1 (MQ=255) cTGACTCGGCAGTTCGCCCGCATCCCACGGCAccc < 1:15339562/35‑1 (MQ=255) tGACTCGGCAGTTCGACCGCATCCCACGGCAcccc < 1:10393536/35‑1 (MQ=255) gACTCGGCAGTTCGACCGCATCCCACGGCACCCCa < 1:16612276/35‑1 (MQ=255) gACTCGGCAGTTCGACCGCATCCCACGGCACCCCa < 1:4250182/35‑1 (MQ=255) gACTCGGCAGTTCGACCGCATCCCACGGCACCCCa < 1:3436098/35‑1 (MQ=255) gACTCGGCAGTTCGACCGCATCCCACGGCACCCCa < 1:10600324/35‑1 (MQ=255) gcTCGGCAGTTCGACCGCATCCCACGGCACCCCAc < 1:1440723/34‑1 (MQ=255) aCTCGGCAGGTCGACCGCATCCCACGGCACCCCAc > 1:20571317/1‑35 (MQ=255) cTCGGCAGTTCGACCGCATCCCACGGCACCCCACt < 1:18557174/35‑1 (MQ=255) cTCGGCAGTTCGACCGCATCCCACGGCACCCCACt < 1:11643750/35‑1 (MQ=255) tCGGCATTGCGCCCGCATCCCACGGCACCCCACtt < 1:15668474/35‑2 (MQ=21) tCGGCAGTTCGACCGCATCCCACGGCACCCCACTg < 1:12530332/35‑1 (MQ=255) tCGGCAGTTCGACCGCATCCCACGGCACCCCACTg < 1:11027409/35‑1 (MQ=255) tCGGCAGTTCGACCGCATCCCACGGCACCCCACTg < 1:20566690/35‑1 (MQ=255) tCGGCAGTTCGACCGCATCCCACGGCACCCCACTg < 1:2020470/35‑1 (MQ=255) | TCAGGCTCCCAGCACCAGTTTTCCATAAACTGACTCGGCAGTTCGACCGCATCCCACGGCACCCCACTG > REL606/3574335‑3574403 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |