New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3320231 | NA (NA) | 11 (0.180) | 3/28 | NT | 25.5% | intergenic (‑312/+118) | tldD/yhdP | predicted peptidase/conserved membrane protein, predicted transporter |
? | REL606 | = 3686161 | 55 (0.540) | coding (401/741 nt) | yiaT | hypothetical protein |
Only 100 of 170 total aligned reads displayed.
TGTAGGCCTGATAAGACGCACAGCGTCGCATCAGgcaacggctg‑‑‑‑‑‑‑‑‑ > REL606/3320198‑3320231 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAACGGCTGGGTGGGGGA < REL606/3686161‑3686143 TGTAGGCCTGATAAGACGCACAGCGTCGCATCCGG > 1:6032500/1‑35 TGTAGGCCTGATAAGACGCACAGCGTCGCATCAGG < 1:1771387/35‑1 TGTAGGCCTGATAAGACGCACAGCGTCGCATCAGG < 1:17376782/35‑1 TGTAGGCCTGATAAGACGCACAGCGTCGCATCAGG < 1:3082514/35‑1 TGTAGGCCTGATAAGACGCACAGCGTCGCATCAGG < 1:1642744/35‑1 TGTAGGCCTGATAAGACGCACAGCGTCGCATCAGG > 1:7206285/1‑35 TGTAGGCCTGATAAGACGCACAGCGTCGCATCAGG > 1:5246567/1‑35 TGTAGGCCTGATAAGACGCACAGCGTCGCATCAGG > 1:6452026/1‑35 GTAGGCCTGATAAGACGCACAGCGTCGCATCAGGC < 1:16015721/35‑1 GTAGGCCTGATAAGACGCACAGCGTCGCATCAGGC < 1:18942187/35‑1 GTAGGCCTGATAAGACGCACAGCGTCGCATCAGGC < 1:445966/35‑1 GTAGGCCTGATAAGACGCACAGCGTCGCATCAGGC < 1:16552305/35‑1 GTAGGCCTGATAAGACGCACAGCGTCGCATCAGGC > 1:8449930/1‑35 GTAGGCCTGATAAGACGCACAGCGTCGCATCAGGC > 1:7991261/1‑35 GTAGGCCTGATAAGACGCACAGCGTCGCATCAGGC < 1:10893835/35‑1 GTAGGCCTGATAAGACGCACAGCGTCGCATCAGGC > 1:11421543/1‑35 GTAGGCCTGATAAGACGCACAGCGTCGCATCAGGC < 1:11568098/35‑1 GTAGGCCTGATAAGACGCACAGCGTCGCATCAGGC < 1:7177197/35‑1 GTAGGCCTGATAAGACGCACAGCGTCGCATCAGGC < 1:18607350/35‑1 TAGGCCTGATAAGACGCACAGCGTCGCATCAGGta > 1:18097836/1‑33 TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCA > 1:5954268/1‑35 TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCA < 1:1302286/35‑1 TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCA < 1:16749177/35‑1 TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCA > 1:12072682/1‑35 TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCA > 1:16145981/1‑35 TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCA < 1:1990223/35‑1 TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCA > 1:15243228/1‑35 TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCA < 1:19523867/35‑1 AGGCCTGATAAGACGCACAGCGTCGCATCAGGCAA > 1:16498386/1‑35 AGGCCTGATAAGACGCACAGCGTCGCATCAGGCAA > 1:17556986/1‑35 AGGCCTGATAAGACGCACAGCGTCGCATCAGGCAA > 1:15596314/1‑35 AGGCCTGATAAGACGCACAGCGTCGCATCAGGCAA > 1:20426807/1‑35 AGGCCTGATAAGACGCACAGCGTCGCATCAGGCAA > 1:4318302/1‑35 AGGCCTGATAAGACGCACAGCGTCGCATCAGGCAA < 1:12385885/35‑1 AGGCCTGATAAGACGCACAGCGTCGCATCAGGCAA > 1:757436/1‑35 AGGCCTGATAAGACGCACAGCGCCGCATCAGGCAA > 1:520958/1‑35 GGCCTGATAAGACGCACAGCGTCGCATCAGGCAAC < 1:20064303/35‑1 GGCCTGATAAGACGCACAGCGTCGCATCAGGCAAC > 1:1190389/1‑35 GGCCTGATAAGACGCACAGCGTCGCATCAGGCAAC < 1:6545229/35‑1 GGCCTGATAAGACGCACAGCGTCGCATCAGGCAAC > 1:9542352/1‑35 GGCCTGATAAGACGCACAGCGTCGCATCAGGCAAC < 1:9655268/35‑1 GCCTGATAAGACGCACAGCGTCGCATCAGGCAACG < 1:19054649/35‑1 GCCTGATAAGACGCACAGCGTCGCATCAGGCAACG > 1:18941492/1‑35 GCCTGATAAGACGCACAGCGTCGCATCAGGCAACG < 1:18125558/35‑1 GCCTGATAAGACGCACAGCGTCGCATCAGGCAACG < 1:8183295/35‑1 GCCTGATAAGACGCACAGCGTCGCATCAGGCAACG > 1:10250004/1‑35 GCCTGATAAGACGCACAGCGTCGCATCAGGCAACG < 1:10371449/35‑1 GCCTGATAAGACGCACAGCGTCGCATCAGGCAACG < 1:11786310/35‑1 GCCTGATAAGACGCACAGCGTCGCATCAGGCAACG > 1:12102419/1‑35 GCCTGATAAGACGCACAGCGTCGCATAAGGCAACG < 1:2807421/35‑1 CCTGATAAGACGCACAGCGTCGCATCAGGCAACGG > 1:8683709/1‑35 CCTGATAAGACGCACAGCGTCGCATCAGGCAACGG > 1:16904657/1‑35 CCTGATAAGACGCACAGCGTCGCATCAGGCAACGG > 1:670125/1‑35 CCTGATAAGACGCACAGCGTCGCATCAGGCAACGG < 1:12533080/35‑1 CCTGATAAGACGCACAGCGTCGCATCAGGCAACGG > 1:13759564/1‑35 CCTGATAAGACGCACAGCGTCGCATCAGGCAACGG > 1:15893296/1‑35 CCTGATAAGACGCACAGCGTCGCATCAGGCAACGG > 1:2811677/1‑35 CCTGATAAGACGCACAGCGTCGCATCAGGCAACGG > 1:2268191/1‑35 CTGATAAGACGCACAGCGTCGCATCAGTCAACGGC > 1:18050283/1‑35 CTGATAAGACGCACAGCGTCGCATCAGGCAACGag > 1:18342776/1‑33 CTGATAAGACGCACAGCGTCGCATCAGGCAACGGC > 1:1474834/1‑35 CTGATAAGACGCACAGCGTCGCATCAGGCAACGGC > 1:7417743/1‑35 CTGATAAGACGCACAGCGTCGCATCAGGCAACGGC > 1:3301691/1‑35 CTGATAAGACGCACAGCGTCGCATCAGGCAACGGC > 1:16675030/1‑35 CTGATAAGACGCACAGCGTCGCATCAGGCAACGGC < 1:6602472/35‑1 TGATAAGACGCACAGCGTCGCATCAGGCAACGGCT > 1:14586699/1‑35 TGATAAGACGCACAGCGTCGCATCAGGCAACGGCT < 1:2372114/35‑1 TGATAAGACGCACAGCGTCGCATCAGGCAACGGCT < 1:11864724/35‑1 TGATAAGACGCACAGCGTCGCATCAGGCAACGGCT < 1:9123500/35‑1 TGATAAGACGCACAGCGTCGCATCAGGCAACGGCT > 1:1343445/1‑35 GATAAGACGCACAGCGTCGCATCAGGCAACGGCTG < 1:10291273/35‑1 GATAAGACGCACAGCGTCGCATCAGGCAACGGCTG < 1:16696645/35‑1 GATAAGACGCACAGCGTCGCATCAGGCAACGGCTG < 1:12956331/35‑1 GATAAGACGCACAGCGTCGCATCAGGCAACGGCTG > 1:5473261/1‑35 GATAAGACGCACAGCGTCGCATCAGGCAACGGCTG > 1:4773815/1‑35 ATAAGACGCACAGCGTCGCATCAGGCAACGGCTGG > 1:19661338/1‑35 ATAAGACGCACAGCGTCGCATCAGGCAACGGCTGG > 1:4050346/1‑35 ATAAGACGCACAGCGTCGCATCAGGCAACGGCTGG > 1:2444031/1‑35 TAAGACGCACAGCGTCGCATCAGGCCACGGCTGGc > 1:7605133/1‑34 TAAGACGCACAGCGTCGCATCAGGCAACGGCTGGc > 1:1456709/1‑34 TAAGACGCACAGCGTCGCATCAGGCAACGGCTGGG > 1:10317162/1‑35 TAAGACGCACAGCGTCGCATCAGGCAACGGCTGGG > 1:3940467/1‑35 AAGACGCACAGCGTCGCATCAGGCAACGGCTGGcg > 1:17140220/1‑33 AAGACGCACAGCGTCGCATCAGGCAACGGCTGGcg > 1:19234890/1‑33 AAGACGCACAGCGTCGCATCAGGCAACGGCTGGcg > 1:13737259/1‑33 AAGACGCACAGCGTCGCATCAGGCAACGGCTGGGg > 1:3674973/1‑34 AAGACGCACAGCGTCGCATCAGGCAACGGCTGGGg > 1:4669065/1‑34 AGACGCACAGCGTCGCATCAGGCAACGGCTGGcgg > 1:899040/1‑32 AGACGCACAGCGTCGCATCAGGCAACGGCTGGcgg > 1:1522519/1‑32 AGACGCACAGCGTCGCATCAGGCAACGGCTGGGgg > 1:6032294/1‑33 AGACGCACAGCGTCGCATCAGGCAACGGCTGGGgg > 1:5728360/1‑33 AGACGCACAGCGTCGCATCAGGCAACGGCTGGGgg > 1:7458274/1‑33 GACGCACAGCGTCGCATCAGGCAACGGCTGGGGGG > 1:11303979/1‑35 ACGCACAGCGTCGCATCAGGCAACGGCTGGGGGGG > 1:10113226/1‑35 ACGCACAGCGTCGCATCAGGCAACGGCTGGGGGGG > 1:16414833/1‑35 CGCACAGCGTCGCATCAGGCAACGGCTGGGGGGGG > 1:10064183/1‑35 CGCACAGCGTCGCATCAGGCAACGGCTGGGGGGGG > 1:3429507/1‑35 GCACAGCGTCGCATCAGGCAACGGCTGGGGGGGGG > 1:16270382/1‑35 GCACAGCGTCGCATCAGGCAACGGCTGGGGGGGGG > 1:14292479/1‑35 CACAGCGTCGCATCAGGCAACGGCTGGGGGGGGGg > 1:20188198/1‑34 TGTAGGCCTGATAAGACGCACAGCGTCGCATCAGgcaacggctg‑‑‑‑‑‑‑‑‑ > REL606/3320198‑3320231 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAACGGCTGGGTGGGGGA < REL606/3686161‑3686143 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |