New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2650606 = | NA (NA) | 12 (0.190) | 3/30 | NT | 17.1% | noncoding (72/2906 nt) | rrlG | 23S ribosomal RNA |
? | REL606 | = 2867475 | 93 (0.910) | coding (1008/1194 nt) | ygeD | predicted inner membrane protein |
Only 100 of 468 total aligned reads displayed.
TTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCTCCTGTAGCAACGCATTGAGCG > REL606/2867441‑2867509 | ttGTACTGCAATCGCATTCCCCGCCCCGACGCttt < 1:3401681/35‑1 (MQ=255) ttGTACTGCAATCGCATTCCCCGCCCCGACGCttt > 1:4022784/1‑35 (MQ=255) tGTACTGCAATCGCATTCCCCGCCCCGACGCtttt > 1:19256176/1‑35 (MQ=255) tGTACTGCAATCGCATTCCCCGCCCCGACGCtttt > 1:15142732/1‑35 (MQ=255) tACTGCAATCGCATTCCCCGCCCCGACGCtttttt > 1:17881898/1‑35 (MQ=255) tGCAATCGCATTCCCCGCCCCGACGCTTTTTTTAc > 1:11612557/1‑35 (MQ=255) gCAATCGCATTCCACGCCCCGACGCTTTTTTTAcc < 1:15866914/35‑1 (MQ=255) aaTCGCATTCCCCGCCCCGACGCTTTTTTTAcccc > 1:5750146/1‑35 (MQ=255) aaTCGCATTCCCCGCCCCGACGCTTTCTTTAcccc < 1:10876944/35‑1 (MQ=255) tCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGc > 1:19562883/1‑35 (MQ=255) gCATTCCCCGCCCCGACGCTTTTTTTACCCCGCTc < 1:2938606/35‑1 (MQ=255) gCATTCCCCGCCCCGACGCTTTTTTTACCCCGCTc < 1:17711353/35‑1 (MQ=255) tccccagccccgACGCTTTTTTTACCCCGCTCCTg < 1:5410125/33‑1 (MQ=38) tCCCCTCCCCGACGCTTatcgcagattagcacgtc > 1:88163‑M2/1‑17 (MQ=255) cccgccccgACGCTTTTTTTACCCCGCTCCTGTAg < 1:6227345/35‑1 (MQ=255) ccccccccgACGCTTatcgcagattagcacgtcct > 1:19175011‑M2/1‑15 (MQ=255) cctccccgACGCTTatcgcagattagcacgtcctt > 1:18079272‑M2/1‑14 (MQ=255) cttcccgacgCTTatcgcagattagcacgtccttc > 1:10067482‑M2/4‑13 (MQ=255) cgccccgACGCTTTTTTTACCCCGCTCCTGTAGCa > 1:2759938/1‑35 (MQ=255) ttcccgacGCTTatcgcagattagcacgtccttca > 1:18998605‑M2/3‑12 (MQ=255) gccccgACGCTTTTTTTACCCCGCTCCTGTAGCaa > 1:13700496/1‑35 (MQ=255) gccccgACGCTTTTTTTACCCCGCTCCTGTAGCaa > 1:7702387/1‑35 (MQ=255) gccccgACGCTTTTTTTACCCCGCTCCTGTAGCaa < 1:14342946/35‑1 (MQ=255) gccccgACGCTTTTTTTACCCCGCTCCTGTAGCaa > 1:18802869/1‑35 (MQ=255) cccccgaCGCTTatcgcagattagcacgtccttca > 1:788325‑M2/2‑12 (MQ=255) tcccgaCGCTTatcgcagattagcacgtcattcat > 1:6869580‑M2/2‑11 (MQ=255) cccgACGCTTatcgcagattagcacgtccttcatc > 1:17807967‑M2/1‑10 (MQ=255) cccgACGCTTatcgcagattagcacgtccttcatc > 1:14768225‑M2/1‑10 (MQ=255) cccgACGCTTatcgcagattagcacgtccttcatc > 1:10455342‑M2/1‑10 (MQ=255) cccgACGCTTTTTTTACCCCGCTCCTGTAGCAACg > 1:724942/1‑35 (MQ=255) cccgACGCTTTTTTTACCCCGCTCCTGTAGCAACg > 1:2195871/1‑35 (MQ=255) ncgACGCTTatcgcagattagcacgtccttcatcg < 1:15787725‑M2/35‑27 (MQ=255) ccgACGCTTatcgcagattagcacgtccttcatcg > 1:6077027‑M2/1‑9 (MQ=255) ccgACGCTTatcgcagattagcacgtccttcatcg > 1:20059836‑M2/1‑9 (MQ=255) ccgACGCTTatcgcagattagcacgtccttcatcg < 1:14066070‑M2/35‑27 (MQ=255) ccgACGCTTatcgcagattagcacgtccttcatcg < 1:13806731‑M2/35‑27 (MQ=255) ccgACGCTTatcgcagattagcacgtccttcatcg > 1:10102007‑M2/1‑9 (MQ=255) ccgACGCTTatcgcagattagcacgtccttcatcg > 1:12159596‑M2/1‑9 (MQ=255) ccgACGCTTatcgcagattagcacgtccttcatcg < 1:6976258‑M2/35‑27 (MQ=255) ccgACGCTTatcgcagattagcacgtccttcatcg > 1:16985645‑M2/1‑9 (MQ=255) ccgACGCTTatcgcagattagcacgtccttcatcg < 1:3616070‑M2/35‑27 (MQ=255) ccgACGCTTTTTTTACCCCGCTCCTGTAGCAACGc > 1:17625437/1‑35 (MQ=255) cagacGCTTatcgcagattagcacgtccttcatcg > 1:9144504‑M2/3‑9 (MQ=255) cgACGCTTatcgcggattagcacgtccttcatcgc > 1:16094547‑M2/1‑8 (MQ=255) cgACGCTTatcgcagattagcacgtccttcatcgc < 1:19675897‑M2/35‑28 (MQ=255) cgACGCTTatcgcagattagcacgtccttcatcgc < 1:4527390‑M2/35‑28 (MQ=255) cgACGCTTatcgcagattagcacgtccttcatcgc < 1:5636590‑M2/35‑28 (MQ=255) cgACGCTTatcgcagattagcacgtccttcatcgc < 1:19805441‑M2/35‑28 (MQ=255) cgACGCTTatcgcagattagcacgtccttcatcgc > 1:12753141‑M2/1‑8 (MQ=255) cgACGCTTatcgcagattagcacgtccttcatcgc > 1:14572487‑M2/1‑8 (MQ=255) cgACGCTTatcgcagattagcacgtccttcatcgc > 1:13904556‑M2/1‑8 (MQ=255) cgACGCTTatcgcagattagcacgtccttaatcgc > 1:11982552‑M2/1‑8 (MQ=255) cgACGCTTTTTTTACCCCGCTCCTGTAGCAACGCa > 1:12240009/1‑35 (MQ=255) gACGCTTatcgcagattagcacgtccttcatcgcc < 1:18257889‑M2/35‑29 (MQ=255) gACGCTTatcgcagattagcacgtccttcatcgcc < 1:16751209‑M2/35‑29 (MQ=255) gACGCTTatcgcagattagcacgtccttcatcgcc < 1:13525907‑M2/35‑29 (MQ=255) gACGCTTatcgcagattagcacgtccttcatcgcc < 1:12914846‑M2/35‑29 (MQ=255) ccgCTTatcgcagattagcacgtccttcatcgcct > 1:10754698‑M2/2‑6 (MQ=255) aCGCTTatcgcagattagcacgtccttcatcgcct > 1:9788264‑M2/1‑6 (MQ=255) aCGCTTatcgcagattagcacgtccttcatcgcct > 1:9012419‑M2/1‑6 (MQ=255) aCGCTTatcgcagattagcacgtccttcatcgcct < 1:5841658‑M2/35‑30 (MQ=255) aCGCTTatcgcagattagcacgtccttcatcgcct > 1:20403234‑M2/1‑6 (MQ=255) aCGCTTatcgcagattagcacgtccttcatcgcct < 1:1535524‑M2/35‑30 (MQ=255) aCGCTTTTTTTACCCCGCTCCTGTAGCAACGCAtt < 1:3063494/35‑1 (MQ=255) cGCTTatcgcagattagcacgtccttcatcgcctc > 1:9399589‑M2/1‑5 (MQ=255) cGCTTatcgcagattagcacgtccttcatcgcctc < 1:1117821‑M2/35‑31 (MQ=255) cGCTTatcgcagattagcacgtccttcatcgcctc > 1:8108082‑M2/1‑5 (MQ=255) cGCTTatcgcagattagcacgtccttcatcgcctc < 1:13251557‑M2/35‑31 (MQ=255) cGCTTatcgcagattagcacgtccttcatcgcctc > 1:15036393‑M2/1‑5 (MQ=255) cGCTTatcgcagattagcacgtccttcatcgcctc > 1:4691862‑M2/1‑5 (MQ=255) cGCTTatcgcagattagcacgtccttcatcgcctc < 1:16387088‑M2/35‑31 (MQ=255) cGCTTatcgcagattagcacgtccttcatcgcctc < 1:3875202‑M2/35‑31 (MQ=255) cGCTTatcgcagattagcacgtccttcatcgcctc < 1:20566492‑M2/35‑31 (MQ=255) cGCTTatcgcagattagcacgtccttcatcgcctc < 1:2356533‑M2/35‑31 (MQ=255) gCTTatcgcagattagcacgtccttcatcgcctct < 1:16575252‑M2/35‑32 (MQ=255) gCTTatcgcagattagcacgtccttcatcgcctct < 1:11393014‑M2/35‑32 (MQ=255) gCTTatcgcagattagcacgtccttcatcgcctct < 1:8378400‑M2/35‑32 (MQ=255) gCTTatcgcagattagcacgtccttcatcgcctct < 1:12475156‑M2/35‑32 (MQ=255) gCTTatcgcagattagcacgtccttcatcgcctct < 1:17236409‑M2/35‑32 (MQ=255) gCTTTTTTTACCCCGCTCCTGTAGCAACGCATTGa > 1:10145817/1‑35 (MQ=255) cTTatcgcagattagcacgtccttcatcgcctctg < 1:1752301‑M2/35‑33 (MQ=255) cTTatcgcagattagcacgtccttcatcgcctctg < 1:10284605‑M2/35‑33 (MQ=255) cTTatcgcagattagcacgtccttcatcgcctctg < 1:7330737‑M2/35‑33 (MQ=255) cTTatcgcagattagcacgtccttcatcgcctctg < 1:16261097‑M2/35‑33 (MQ=255) cTTatcgcagattagcacgtccttcatcgcatctg > 1:4323932‑M2/1‑3 (MQ=255) cTTTTTTTACCCCGCTCCTGTAGCAACGCATTGAg > 1:13063095/1‑35 (MQ=255) tttttttACCCCGCTCCTGTAGCAACGCATTGAGc < 1:8647098/35‑1 (MQ=255) ttatcgcagattagcacgtccttcatcgcctctga < 1:9590969‑M2/35‑34 (MQ=255) ttatcgcagattagcacgtccttcatcgcctctga < 1:371006‑M2/35‑34 (MQ=255) ttatcgcagattagcacgtccttcatcgcctctga < 1:5216944‑M2/35‑34 (MQ=255) ttatcgcagattagcacgtccttcatcgcctctga < 1:20296757‑M2/35‑34 (MQ=255) ttatcgcagattagcacgtccttcatcgcctctga < 1:1166775‑M2/35‑34 (MQ=255) ttatcgcagattagcacgtccttcatcgcctctga < 1:15915171‑M2/35‑34 (MQ=255) tatcgcagattagcccgtccttcatcgcctctgac > 1:4996097‑M2/1‑1 (MQ=255) tatcgcagattagcacgtccttcatcgcctctgac < 1:12412533‑M2/35‑35 (MQ=255) tatcgcagattagcacgtccttcatcgcctctgac < 1:18426779‑M2/35‑35 (MQ=255) tatcgcagattagcacgtccttcatcgcctctgac < 1:6563063‑M2/35‑35 (MQ=255) tatcgcagattagcacgtccttcatcgcctctgac < 1:6365762‑M2/35‑35 (MQ=255) tatcgcagattagcacgtccttcatcgcctctgac < 1:14965618‑M2/35‑35 (MQ=255) tatcgcagattagcacgtccttcatcgcctctgac < 1:1552739‑M2/35‑35 (MQ=255) | TTTGTACTGCAATCGCATTCCCCGCCCCGACGCTTTTTTTACCCCGCTCCTGTAGCAACGCATTGAGCG > REL606/2867441‑2867509 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |