New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1822767 = | 84 (0.820) | 11 (0.140) | 3/38 | NT | 13.7% | coding (1422/1962 nt) | topB | DNA topoisomerase III |
? | REL606 | = 2900727 | 72 (0.890) | coding (86/771 nt) | yqeC | hypothetical protein |
Only 100 of 175 total aligned reads displayed.
TTCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAGCACCAACAACAGAAATCACAGTGGGACGTTT > REL606/2900693‑2900761 | ttCTGCCAGCCAAAAAAGCAAGCTGGTTTTccccc < 1:4588363/35‑1 (MQ=255) ttCTGCCAGCCAAAAAAGCAAGCTGGTTTTccccc < 1:13513240/35‑1 (MQ=255) tCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC < 1:10005673‑M1/35‑1 (MQ=255) tCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC > 1:18728536‑M1/1‑35 (MQ=255) tCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC > 1:2464899‑M1/1‑35 (MQ=255) tCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC > 1:17878627‑M1/1‑35 (MQ=255) tCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC > 1:8864986‑M1/1‑35 (MQ=255) tCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC < 1:13370255‑M1/35‑1 (MQ=255) ctcccagccaaaaAAGCAAGCTGGTTTTCCCCCCA < 1:948370‑M1/32‑1 (MQ=255) cTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA < 1:358164‑M1/35‑1 (MQ=255) cTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA < 1:17291301‑M1/35‑1 (MQ=255) cTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA < 1:3899021‑M1/35‑1 (MQ=255) cTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA < 1:14855704‑M1/35‑1 (MQ=255) cTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA < 1:6932931‑M1/35‑1 (MQ=255) tGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAG > 1:16761265‑M1/1‑35 (MQ=255) tGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAG > 1:17831976‑M1/1‑35 (MQ=255) ggccagccaaAAAAGCAAGCTGGTTTTCCCCCCAG < 1:13957744‑M1/34‑1 (MQ=255) gccagccaAAAAAGCAAGCTGGTTTTCCCCCCAGC < 1:14733318‑M1/35‑1 (MQ=255) ccagccaAAAAAGCAAGCTGGTTTTCCCCCcagca < 1:854092‑M2/35‑6 (MQ=255) ccagccaAAAAAGCAAGCTGGTTTTCCCCCcagca > 1:5307588‑M2/1‑30 (MQ=255) ccagccaAAAAAGCAAGCTGGTTTTCCCCCcagca < 1:20134874‑M2/35‑6 (MQ=255) ccagccaAAAAAGCAAGCTGGTTTTCCCCCcagca > 1:15488413‑M2/1‑30 (MQ=255) ccagccaAAAAAGCAAGCTGGTTTTCCCCCcagca < 1:17503518‑M2/35‑6 (MQ=255) cagccaAAAAAGCAAGCTGGTTTTCCCCCCAGCAc < 1:18547268/35‑1 (MQ=255) cagccaAAAAAGCAAGCTGGTTTTCCCCCCAGCAc < 1:1071039/35‑1 (MQ=255) cagccaAAAAAGCAAGCTGGTTTTCCCCCCAGCAc > 1:12666253/1‑35 (MQ=255) agccaAAAAAGCAAGCTTGTTTTCCCCCCAGCAcc > 1:10394809/1‑35 (MQ=255) agccaAAAAAGCAAGCTGGTTTTCCCCCCAGCAcc > 1:10322909/1‑35 (MQ=255) agccaAAAAAGCAAGCTGGTTTTCCCCCCAGCAcc < 1:16658389/35‑1 (MQ=255) ccaAAAAAGCAAGCTGGTTTTCCCCCCAGCACcaa > 1:4979109/1‑35 (MQ=255) ccaAAAAAGCAAGCTGGTTTTCCCCCCAGCACcaa > 1:9010993/1‑35 (MQ=255) aaaaaaGCAAGCTGGTTTTCCCCCCAGCACcaaca < 1:18427788/35‑1 (MQ=255) aaaaaaGCAAGCTGGTTTTCCCCCCAGCACcaaca > 1:3578188/1‑35 (MQ=255) aaaaaGCAAGCTGGTTTTCCCCCCAGAACcaacaa < 1:19385378/35‑1 (MQ=255) aaaaGCAAGCTGGTTTTCCCCCCAGCACCaacaac > 1:15310609/1‑35 (MQ=255) aaaaGCAAGCTGGTTTTCCCCCCAGCACCaacaac > 1:6603711/1‑35 (MQ=255) aaaGCAAGCTGGTTTTCCCCCCAGCACCAacaaca < 1:11669445/35‑1 (MQ=255) aaaGCAAGCTGGTTTTCCCCCCAGCACCAacaaca > 1:17860715/1‑35 (MQ=255) aaaGCAAGCTGGTTTTCCCCCCAGCACCAacaaca > 1:14619875/1‑35 (MQ=255) aaaGCAAGCTGGTTTTCCCCCCAGCACCAacaaca < 1:13185611/35‑1 (MQ=255) aagcaagcTGGTTTTCCCCCCAGCACCAACAACAg > 1:5329194/1‑35 (MQ=255) aagcaagcTGGTTTTCCCCCCAGCACCAACAACAg < 1:8051691/35‑1 (MQ=255) aagcaagcTGGTTTTCCCCCCAGCACCAACAACAg > 1:19924041/1‑35 (MQ=255) agcaagcTTGTTTTCCCCCCAGCACCAACAACAGa > 1:15635739/1‑35 (MQ=255) gcaatcTGGTTTTCCCCCCAGCACCAACAACAGaa > 1:6086883/1‑35 (MQ=255) caagcTGGTTTTCCCCCCAGCACCAACAACAGaaa > 1:11510195/1‑35 (MQ=255) aagcTTGTTGTCCCCCCAGCACCAACAACAGAAAt < 1:20243943/35‑1 (MQ=37) aagcTGGTTTTCCCCCCAGCACCAACAACAGAAAt > 1:3816250/1‑35 (MQ=255) aagcTGGTTTTCCCCCCAGCACCAACAACAGAAAt > 1:11661802/1‑35 (MQ=255) aagcTGGTTTTCCCCCCAGCACCAACAACAGAAAt < 1:10194184/35‑1 (MQ=255) aagcTGGTTTTCACCCCAGCACCAACAACAGAAAt < 1:19236128/35‑1 (MQ=255) cTGGTTTTCCCCCCAGCACCAACAACAGAAATcac < 1:13347958/35‑1 (MQ=255) tGGTTTTCCCCCCAGCACCAACAACAGAAATcaca > 1:14149668/1‑35 (MQ=255) tGGTTTTCCCCCCAGCACCAACAACAGAAATcaca > 1:8915447/1‑35 (MQ=255) tGGTTTTCCCCCCAGCACCAACAACAGAAATcaca > 1:18363479/1‑35 (MQ=255) cccttttcccCCcagcaactcatcgcctttcgcca > 1:13871513‑M2/4‑12 (MQ=255) ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg > 1:4166293/1‑35 (MQ=255) ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg > 1:16701845/1‑35 (MQ=255) ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg > 1:2872132/1‑35 (MQ=255) ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg < 1:6728476/35‑1 (MQ=255) ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg > 1:2367186/1‑35 (MQ=255) gTTTTCCCCCCAGCACCAACAACAGAAATCACAGt > 1:2242059/1‑35 (MQ=255) gTTTTCCCCCCAGCACCAACAACAGAAATCACAGt < 1:10095603/35‑1 (MQ=255) cttttcCCCCcagcaactcatcgcctttcgccacc > 1:19007127‑M2/2‑10 (MQ=255) ttttCCCCCcagcaactcatcgcctttcgccacca > 1:9265414‑M2/1‑9 (MQ=255) ttttCCCCCCAGCACCAACAACAGAAATCACAGTg > 1:3263523/1‑35 (MQ=255) ttttCCCCCCAGCACCAACAACAGAAATCACAGTg < 1:16415960/35‑1 (MQ=255) atttcCCCCCAGCctcaggctgtaatcttaatttc < 1:2779359‑M1/34‑23 (MQ=255) atttcCCCCCAGCctcaggctgtaatcttaatttc < 1:1331012‑M1/34‑23 (MQ=255) tttCCCCCCAGCctcaggctgtaatcttaatttca < 1:17567557‑M1/35‑24 (MQ=255) tttCCCCCCAGCACCAACAACAGAAATCACAGTgg > 1:7341142/1‑35 (MQ=255) tttCCCCCCAGCACCAACAACAGAAATCACAGTgg > 1:18680914/1‑35 (MQ=255) tttACCCCCAGCctcaggctgtaatcttaatttca < 1:3037177‑M1/35‑24 (MQ=255) ttCCCCCCAGCACCAACAACAGAAATCACAGTggg > 1:12894823/1‑35 (MQ=255) ttCCCCCCAGCACCAACAACAGAAATCACAGTggg > 1:11042044/1‑35 (MQ=255) ttCCCCCCAGCACCAACAACAGAAATCACAGTggg > 1:15950842/1‑35 (MQ=255) ttCCCCCCAGCACCAACAACAGAAATCACAGTggg < 1:19430143/35‑1 (MQ=255) tacccccagCctcaggctgtaatcttaatttcaaa < 1:7674614‑M1/33‑26 (MQ=255) tCCCCGcagcaactcatcgcctttcgccaccacag > 1:12001901‑M2/1‑6 (MQ=255) ccccccagcaactcatcgcctttcgacaccacagg > 1:7024687‑M2/1‑5 (MQ=255) ccccccAGCACCAACAACAGAAATCACAGTGGGAc < 1:9266412/35‑1 (MQ=255) ccccccAGCACCAACAACAGAAATCACAGTGGGAc > 1:20561702/1‑35 (MQ=255) acccccaGCctcaggctgtaatcttaatttcaaag < 1:97567‑M1/34‑27 (MQ=255) acccccaGCctcaggctgtaatcttaatttcaaag < 1:17509686‑M1/34‑27 (MQ=255) cccccagcaactcatcgcctttcgccaccacaggc > 1:661719‑M2/1‑4 (MQ=255) cccccAGCctcaggctgtaatcttaatttcaaaga < 1:8186920‑M1/35‑28 (MQ=255) cccccAGCACCAACAACAGAAATCACAGTGGGACg > 1:2692893/1‑35 (MQ=255) cccccAGCACCAACAACAGAAATCACAGTGGGACg < 1:18968972/35‑1 (MQ=255) ccccAGCctcaggctgtaatcttaatttcaaagaa < 1:7189374‑M1/35‑29 (MQ=255) ccccAGCACCAACAACAGAAATCACAGTGGGACGt < 1:20300864/35‑1 (MQ=255) acccAGCACCAACAACAGAAATCACAGTGGGACGt < 1:5902062/34‑1 (MQ=255) cccagcaactcatcgcctttcgccaccacaggcag > 1:827183‑M2/1‑2 (MQ=255) cccAGCACCAACAACAGAAATCACAGTGGGACGtt < 1:16702159/35‑1 (MQ=255) cccAGCACCAACAACAGAAATCACAGTGGGACGtt < 1:2007012/35‑1 (MQ=255) cccAGCACCAACAACAGAAATCACAGTGGGACGtt < 1:4275446/35‑1 (MQ=255) cccAGCACCAACAACAGAAATCACAGTGGGACGtt < 1:19135900/35‑1 (MQ=255) ccAGCctcaggctgtaatcttaatttcaaagaaac < 1:12299406‑M1/35‑31 (MQ=255) ccAGCctcaggctgtaatcttaatttcaaagaaac < 1:3149275‑M1/35‑31 (MQ=255) ccAGCACCAACAACAGAAATCACAGTGGGACGttt < 1:905057/35‑1 (MQ=255) ccAGCACCAACAACAGAAAACACAGTTGGACGttt > 1:1265524/1‑35 (MQ=37) | TTCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAGCACCAACAACAGAAATCACAGTGGGACGTTT > REL606/2900693‑2900761 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |