New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3686160 | 56 (0.540) | 23 (0.230) | 5/46 | NT | 30.0% | coding (402/741 nt) | yiaT | hypothetical protein |
? | REL606 | = 4467594 | NA (NA) | intergenic (‑281/+73) | holC/pepA | DNA polymerase III subunit chi/leucyl aminopeptidase |
Only 100 of 143 total aligned reads displayed.
TGTGGAATACCGATAGCTCCCCCACCCAGCCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3686126‑3686160 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < REL606/4467594‑4467561 GTGGAATACCGATAGCTCCCCCACCCAGCCGTTGa > 1:11269094/1‑34 cCCCCCCCCCAGCCGTTGTAGGCCTGATAAGACGC < 1:17995873/34‑1 CCCCCCCCCAGCCGTTGTAGGCCTGATAAGACGCG < 1:4446339/35‑1 CCCCCCCCAGCCGTTGTAGGCCTGATAAGACGCGC < 1:6131751/35‑1 CCCCCCCCAGCCGTTGTAGGCCTGATAAGACGCGC < 1:2865566/35‑1 cCCCAGCCGTTGTAGGCCTGATAAGACGCGCAAGC < 1:7568299/34‑1 cCCCAGCCGTTGTAGGCCTGATAAGACGCGCAAGC < 1:9371672/34‑1 CCCAGCCGTTGTAGGCCTGATAAGACGCGCAAGCG < 1:9533212/35‑1 CCAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGT < 1:783597/35‑1 CAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTC < 1:3316719/35‑1 CAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTC < 1:4545082/35‑1 CAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTC < 1:16566140/35‑1 AGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCG < 1:5278682/35‑1 AGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCG < 1:8116129/35‑1 AGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCG < 1:6669881/35‑1 GCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGC < 1:4011322/35‑1 CCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCA < 1:18298466/35‑1 CCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCA < 1:9804089/35‑1 CGTTGTAGGCCTGATAAGACGCGCAAGCGTGGCAT > 1:7053836/1‑35 CGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCAT > 1:4367779/1‑35 GTTGTAGGCCTGATAAGACGCGCAAGCGTCGCAcc > 1:20555701/1‑33 GTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATC < 1:4672422/35‑1 GTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATC < 1:18690490/35‑1 GTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATC < 1:13690001/35‑1 GTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATC > 1:10157131/1‑35 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA > 1:181024/1‑35 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA > 1:17594202/1‑35 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA > 1:3850741/1‑35 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 1:3586010/35‑1 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 1:19655375/35‑1 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 1:19765664/35‑1 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 1:2297283/35‑1 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA > 1:2374444/1‑35 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA > 1:10042762/1‑35 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA > 1:9451897/1‑35 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 1:9244698/35‑1 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 1:8858323/35‑1 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA > 1:8665228/1‑35 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 1:12272146/35‑1 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 1:834510/35‑1 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA > 1:1332413/1‑35 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 1:13732348/35‑1 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 1:8089646/35‑1 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA < 1:14580229/35‑1 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA > 1:15306778/1‑35 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCA > 1:1547347/1‑35 TTGTAGGCCTGATAAGACGCGCAAGCGGCGCATCA > 1:20089936/1‑35 TGTGGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:19949459/35‑1 TGTATGCCTGATAAGACGCGCAAGCGTCGCATCAG > 1:17857983/1‑35 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:7654976/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG > 1:8212865/1‑35 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG > 1:341894/1‑35 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:6878837/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:5733909/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:4523468/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:5690169/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:4844332/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG > 1:10106480/1‑35 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:10657531/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG > 1:10791730/1‑35 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG > 1:11524561/1‑35 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:12294053/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:12450843/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:14049922/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:14577822/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:14750695/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:15350704/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG > 1:15425461/1‑35 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG > 1:16012742/1‑35 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:16242097/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:1627698/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG > 1:16728450/1‑35 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG > 1:2622963/1‑35 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:17289700/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG > 1:178453/1‑35 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:19125305/35‑1 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAG < 1:19815276/35‑1 TGTAGGCCTGATAAGACACGCAAGCGTCGCATCAG < 1:6034267/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:9854734/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG > 1:2292703/1‑35 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:2876971/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:11153759/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:1152394/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG > 1:3065581/1‑35 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:11701653/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:8529252/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG > 1:8355933/1‑35 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:19414321/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG > 1:12615022/1‑35 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:13940698/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:18909176/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG > 1:18735317/1‑35 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG > 1:7375259/1‑35 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG > 1:1572750/1‑35 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG > 1:16895982/1‑35 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:16867065/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG > 1:16865223/1‑35 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:1633685/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:5010139/35‑1 GTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < 1:4769329/35‑1 TGTGGAATACCGATAGCTCCCCCACCCAGCCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3686126‑3686160 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGG < REL606/4467594‑4467561 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |