New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 368616056 (0.540)10 (0.160) 3/30 NT 30.3% coding (402/741 nt) yiaT hypothetical protein
?REL606 4048325 = 11 (0.170)coding (224/927 nt) yihR predicted aldose‑1‑epimerase

CCCCCACCCAGCCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/3686144‑3686160
‑‑‑‑‑‑‑‑cagccgttgGCGATCCGGTTCGGCCACGGAATAAGCACTTTAC  >  REL606/4048325‑4048358
                                                   
CCCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCAC                  <  1:9897997/35‑1
CCCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCAC                  <  1:9323223/35‑1
CCCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCAC                  <  1:17360047/35‑1
CCCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCAC                  <  1:16665987/35‑1
 CCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCACG                 <  1:12422903/35‑1
 CCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCACG                 <  1:4292959/35‑1
 CCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCACG                 <  1:8331632/35‑1
  CCCCCCCAGCCGTTGGCGATCCGGTTCGGCCACGG                <  1:9262051/35‑1
  CCCCCCCAGCCGTTGGCGATCCGGTTCGGCCACGG                <  1:6308722/35‑1
  CCCCCCCAGCCGTTGGCGATCCGGTTCGGCCACGG                <  1:15581129/35‑1
   cccCCCAGCCGTTGGCGATCCGGTTCGGCCACGGA               <  1:7348155/32‑1
   cccCCCAGCCGTTGGCGATCCGGTTCGGCCACGGA               <  1:17459574/32‑1
   cccCCCAGCCGTTGGCGATCCGGTTCGGCCACGGA               <  1:14642477/32‑1
    ccCCCAGCCGTTGGCGATCCGGTTCGGCCACGGAA              <  1:11981154/33‑1
     cCCCAGCCGTTGGCGATCCGGTTCGGCCACGGAAT             <  1:17449316/34‑1
     cCCCAGCCGTTGGCGATCCGGTTCGGCCACGGAAT             <  1:15350068/34‑1
     cCCCAGCCGTTGGCGATCCGGTTCGGCCACGGAAT             <  1:1490911/34‑1
     cCCCAGCCGTTGGCGATCCGGTTCGGCCACGGAAT             <  1:14186213/34‑1
     cCCCAGCCGTTGGCGATCCGGTTCGGCCACGGAAT             <  1:740126/34‑1
     cCCCAGCCGTTGGAGATCCGGTTCGGCCACGGAAT             <  1:20506821/34‑1
      CCCAGCCGTTGGCGATCCGGTTCGGCCACGGAATA            <  1:1570640/35‑1
      CCCAGCCGTTGGCGATCCGGTTCGGCCACGGAATA            <  1:4568272/35‑1
      CCCAGCCGTTGGCGATCCGGTTCGGCCACGGAATA            <  1:17592434/35‑1
       CCAGCCGTTGGCGATCCGGTTCGGCCACGGAATAc           <  1:6557607/35‑2
       CCAGCCGTTGGCGATCCGGTTCGGCCACGGAATAA           <  1:2210182/35‑1
       CCAGCCGTTGGCGATCCGGTTCGGCCACGGAATAA           <  1:19083427/35‑1
       CCAGCCGTTGGCGATCCGGTTCGGCCACGGAATAA           <  1:7588139/35‑1
       CCAGCCGTTGGCGATCCGGTTCGGCCACGGAATAA           <  1:7333455/35‑1
        CAGCCGTTGGCGATCCGGTTCGGCCACGGAATAAG          <  1:18848524/35‑1
        CAGCCGTTGGCGATCCGGTTCGGCCACGGAATAAG          >  1:4800662/1‑35
        CAGCCGTTGGCGATCCGGTTCGGCCACGGAATAAG          <  1:10503395/35‑1
        CAGCCGTTGGCGATCCGGTTCGGCCACGGAATAAG          >  1:13455727/1‑35
        CAGCCGTTGGCGATCCGGTTCGGCCACGGAAAAAG          >  1:19243771/1‑35
        CAGCCGTTGGCGATCCGGTTCGGCCACAGAATAAG          >  1:19968796/1‑35
         AGCCGTTGGCGATCCGGTTCGGCCACGGAATAAGC         >  1:18947937/1‑35
         AGCCGTTGGCGATCCGGTTCGGCCACGGAATAAGC         >  1:9833637/1‑35
         AGCCGTTGGCGATCCGGTTCGGCCACGGAATAAGC         <  1:5952276/35‑1
         AGCCGTTGGCGATCCGGTTCGGCCACGGAATAAGC         <  1:14492224/35‑1
          GCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCA        >  1:18049984/1‑35
          GCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCA        <  1:17266316/35‑1
          GCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCA        >  1:13290266/1‑35
          GCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCA        >  1:13662483/1‑35
          GCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCA        >  1:14908908/1‑35
          GCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCA        >  1:3738279/1‑35
           CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC       <  1:13258502/35‑1
           CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC       <  1:6697236/35‑1
           CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC       <  1:3788909/35‑1
           CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC       <  1:8036755/35‑1
           CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC       >  1:15180896/1‑35
           CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC       <  1:19379835/35‑1
           CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC       >  1:16556161/1‑35
            CGTTGGCGATCCGGTTCGGCCACGGAATAAGCACT      >  1:19943616/1‑35
            CGTTGGCGATCCGGTTCGGCCACGGAATAAGCACT      >  1:9020058/1‑35
            CGTTGGCGATCAGGTTCGGCCACGGAATAAGCACT      <  1:5000502/35‑1
             GTTGGCGATCCGGTTCGGCCACGGAATAAGCACTT     <  1:14083072/35‑1
             GTTGGCGATCCGGTTCGGCCACGGAATAAGCACTT     >  1:6043797/1‑35
             GTTGGCGATCCGGTTCGGCCACGGAATAAGCACTT     <  1:6780700/35‑1
             GTTGGCGATCCGGTTCGGCCACGGAATAAGCACTT     >  1:19332219/1‑35
              TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT    <  1:8665287/35‑1
              TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT    >  1:7643344/1‑35
              TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT    <  1:9527211/35‑1
              TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT    <  1:9966827/35‑1
              TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT    <  1:6841325/35‑1
              TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT    <  1:2409291/35‑1
              TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT    <  1:2218291/35‑1
              TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT    <  1:18759650/35‑1
              TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT    <  1:12548570/35‑1
              TTGGCGATCCGGTTAGGCCACGGAATAAGCACTTT    <  1:10268056/35‑1
               TGGCGATCCGGTTCGGCCACGGAATAAGCACTTTA   <  1:4866715/35‑1
               TGGCGATCCGGTTCGGCCACGGAATAAGCACTTTA   <  1:2818983/35‑1
               TGGCGATCCGGTTCGGCCACGGAATAAGCACTTTA   >  1:15972399/1‑35
               TGGCGATCCGGTTCGGCCACGGAATAAGCACTTTA   >  1:966074/1‑35
                GGCGATCCGGTTCGGCCACGGAATAAGCACTTTAC  <  1:7379728/35‑1
                GGCGATCCGGTTCGGCCACGGAATAAGCACTTTAC  <  1:19260553/35‑1
                GGCGATCCGGTTCGGCCACGGAATAAGCACTTTAC  <  1:17710129/35‑1
                GGCGATCCGGTTCGGCCACGGAATAAGCACTTTAC  <  1:11717393/35‑1
                                                   
CCCCCACCCAGCCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/3686144‑3686160
‑‑‑‑‑‑‑‑cagccgttgGCGATCCGGTTCGGCCACGGAATAAGCACTTTAC  >  REL606/4048325‑4048358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.