New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 326209 = | 90 (0.880) | 5 (0.050) | 3/46 | NT | 7.2% | coding (854/1887 nt) | prpE | predicted propionyl‑CoA synthetase with ATPase domain |
? | REL606 | 3368427 = | 42 (0.430) | coding (508/990 nt) | rpoA | DNA‑directed RNA polymerase subunit alpha |
TCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATT > REL606/3368393‑3368461 | tCCACAGGGCTGTAGCATGCGTCGACCAGCAGACg > 1:2820018/1‑35 (MQ=255) tCCACAGGGCTGTAGCATGCGTCGACCAGCAGACg < 1:8899732/35‑1 (MQ=255) tCCACAGGGCTGTAGCATGCGTCGACCAGCAGACg < 1:14805403/35‑1 (MQ=255) tCCACAGGGCTGTAGCATGCGTCGACCAGCAGACg < 1:9515550/35‑1 (MQ=255) ncacaGGGCTGTAGCATGCGTCGACCAGCAGACgg > 1:9082586/2‑35 (MQ=255) ccACAGGGCTGTAGCATGCGTCGACCAGCAGACgg > 1:18433654/1‑35 (MQ=255) ccACAGGGCTGTAGCATGCGTCGACCAGCAGACgg > 1:13714445/1‑35 (MQ=255) cacaGGGCTGTAGCATGCGTCGACCAGCAGACGGc > 1:9734227/1‑35 (MQ=255) cacaGGGCTGTAGCATGCGTCGACCAGCAGACGGc > 1:12027703/1‑35 (MQ=255) acaGGGCTGTAGCATGCGTCGACCAGCAGACGGcc > 1:19261989/1‑35 (MQ=255) caGGGCTGTAGCATGCGTCGACCAGCAGACGGCCg > 1:12631348/1‑35 (MQ=255) aGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGa > 1:6528277/1‑35 (MQ=255) gggCTGTAGCATGCGTCTACCAGCAGACGGCCGAt > 1:6477007/1‑35 (MQ=255) gggCTGTAGCATGCGTCGACCAGCAGACGGCCGAt > 1:4236544/1‑35 (MQ=255) gCTGTAGCATGCGTCGACCAGCAGACGGGCGAtta > 1:7493167/1‑34 (MQ=255) cTGTAGCATGCGTCGACCAGCAGACGGCCGCTTgg > 1:16134622/1‑35 (MQ=255) tGTAGCATGCGTCGACCAGCAGACGGCCGATTggg > 1:18441708/1‑35 (MQ=255) tGTAGCATGCGTCGACCAGCAGACGGCCGATTggg > 1:14885304/1‑35 (MQ=255) tGTAGCATGCGTCGACCAGCAGACGGCCGATTggg > 1:14978812/1‑35 (MQ=255) tGTAGCATGCGTCGACCAGCAGACGGCCGATTggg > 1:3368434/1‑35 (MQ=255) tGTAGCATGCGTCGACCAGCAGACGGCCGATTggg > 1:18995434/1‑35 (MQ=255) tGTAGCATGCGTCGACCAGCAGACGGCCGATTggg > 1:17030455/1‑35 (MQ=255) gTAGCATGCGTCGACCAGCAGACGGCCGATTgggg > 1:11552011/1‑34 (MQ=255) gTAGCATGCGTCGACCAGCAGACGGCCGATTGGgc > 1:20257397/1‑35 (MQ=255) gTAGCATGCGTCGACCAGCAGACGGCCGATTGGgc > 1:4433929/1‑35 (MQ=255) gTAGCATGCGTCGACCAGCAGACGGCCGATTGGgc > 1:1389418/1‑35 (MQ=255) tAGCATGCGTCGACCAGCAGACGGCCGATTGGgcg > 1:6790647/1‑35 (MQ=255) tAGCATGCGTCGACCAGCAGACGGCCGATTGGgcg > 1:3596564/1‑35 (MQ=255) aGCATGCGTCGACCAGCAGACGGCCGATTGGgcgc > 1:19556816/1‑35 (MQ=255) gCATGCGTCGACCAGCAGACGGCCGATTGGGCGCt > 1:2604109/1‑35 (MQ=255) aTGCGTCGACCAGCAGACGGCCGATTGGGCGCTCa > 1:17844015/1‑35 (MQ=255) aTGCGTCGACCAGCAGACGGCCGATTGGGCGCTCa > 1:13683277/1‑35 (MQ=255) ttcGTCGACCAGCAGACGGCCGCTTGGGCGCTCAt > 1:19391987/3‑35 (MQ=38) tGCGTCGACCAGCAGACGGCCGATTGGGCGCTCAt > 1:18848112/1‑35 (MQ=255) tGCGTCGACCAGCAGACGGCCGACTGGGTCCTCAt > 1:8733132/1‑35 (MQ=25) gCGTCGACCAGCAGACGGCCGATTGGGCGCTCAtc > 1:20576744/1‑35 (MQ=255) gCGTCGACCAGCAGACGGCCGATTGGGCGCTCAtc > 1:6073663/1‑35 (MQ=255) gCGTCGACCAGCAGACGGCCGATTGGGCGCTCAtc > 1:9871400/1‑35 (MQ=255) cGTCGACCAGCAGACGGCCGATTGGGCGCTCAtct > 1:4459616/1‑35 (MQ=255) gTCGACCAGCAGACGGCCGATTGGGCGCTCAtctt > 1:16941143/1‑35 (MQ=255) gTCGACCAGCAGACGGCCGATTGGGCGCTCAtctt > 1:16099865/1‑35 (MQ=255) tCGACCAGCAGACGGCCGATTGGGCGCTCAtcttc > 1:9664658/1‑35 (MQ=255) cGACCAGCAGACTGCCGATTGGGCGCTCAtcttct > 1:5223056/1‑35 (MQ=255) gccccccacccGGCCGATTGGGCGCTCATcttctt < 1:330604‑M2/24‑1 (MQ=255) gcccagcacccGGCCGATTGGGCGCTCATcttctt < 1:20434107‑M2/24‑1 (MQ=255) gACCAGCAGACGGCCGATTGGGCGCTCATcttctt > 1:7187543/1‑35 (MQ=255) ccccaccacccGGCCGATTGGGCGCTCATcttctt < 1:5816918‑M2/24‑1 (MQ=255) cccaccacccGGCCGATTGGGCGCTCATCttcttc < 1:8429175‑M2/25‑1 (MQ=255) aCCAGCAGACTGCCGATTGGGCGCTCATCttcttc > 1:18332493/1‑35 (MQ=255) aCCAGCAGACGGCCGATTGGGCGCTCATCttcttc > 1:17863283/1‑35 (MQ=255) aCCAGCAGACGGCCGATTGGGCGCTCATCttcttc > 1:17149612/1‑35 (MQ=255) aCCAGCAGACGGCCGATTGGGCGCTCATCttcttc > 1:16744916/1‑35 (MQ=255) cagcagACGGCCGATTGGGCGCTCATCTTCTTCCg > 1:17821168/1‑35 (MQ=255) cagcagACGGCCGATTGGGCGCTCATCTTCTTCCg > 1:17378749/1‑35 (MQ=255) cagcagACGGCCGATTGGGCGCTCATCTTCTTCCg > 1:11501035/1‑35 (MQ=255) cccacccGGCCGATTGGGCGCTCATCTTCTTCCga < 1:15902812‑M2/28‑1 (MQ=255) agcagACGGCCGATTGGGCGCTCATCTTCTTCCga > 1:15181799/1‑35 (MQ=255) agcagACGGCCGATTGGGCGCTCATCTTCTTCCga > 1:9642222/1‑35 (MQ=255) accacccGGCCGATTGGGCGCTCATCTTCTTCCga < 1:18063869‑M2/28‑1 (MQ=255) gcagACGGCCGATTGGGCGCTCATCTTCTTCCgaa > 1:10332109/1‑35 (MQ=255) gcagACGGCCGATTGGGCGCTCATCTTCTTCCgaa > 1:2161154/1‑35 (MQ=255) gcagACGGCCGATTGGGCGCTCATCTTCTTCCgaa > 1:13975566/1‑35 (MQ=255) cagACGGCCTATTGGGCGCTCATCTTCTTCCgaat > 1:10975188/1‑35 (MQ=255) cagACGGCCGATTGGGCGCTCATCTTCTTCCgaat > 1:20612349/1‑35 (MQ=255) cagACGGCCGATTGGGCGCTCATCTTCTTCCgaat > 1:752160/1‑35 (MQ=255) cagACGGCCGATTGGGCGCTCATCTTCTTCCgaat > 1:9203951/1‑35 (MQ=255) cacccGGCCGATTGGGCGCTCATCTTCTTCCgaat < 1:12059086‑M2/30‑1 (MQ=255) agACGGCCGATTGGGCGCTCATCTTCTTCCgaatg > 1:18717748/1‑35 (MQ=255) agACGGCCGATTGGGCGCTCATCTTCTTCCgaatg > 1:7857018/1‑35 (MQ=255) acccGGCCGATTGGGCGCTCATCTTCTTCCgaatg < 1:1381351‑M2/31‑1 (MQ=255) gACGGCCGATTGGGCGCTCATCTTCTTCCgaatga > 1:385376/1‑35 (MQ=255) cccGGCCGATTGGGCGCTCATCTTCTTCCgaatga < 1:18780528‑M2/32‑1 (MQ=255) aCGGCCGATTGGGCGCTCATCTTCTTCCgaatgaa > 1:18312206/1‑35 (MQ=255) cGGCCGATTGGGCGCTCATCTTCTTCCgaatgaat < 1:16775112‑M2/34‑1 (MQ=255) cGGCCGATTGGGCGCTCATCTTCTTCCgaatgaat < 1:19133240‑M2/34‑1 (MQ=255) ggCCGATTGGGCGCTCATCTTCTTCCGAATGAAtt > 1:15122356/1‑35 (MQ=255) ggCCGATTGGGCGCTCATCTTCTTCCGAATGAAtt < 1:6753184/35‑1 (MQ=255) ggCCGATTGGGCGCTCATCTTCTTCAGAATGAAtt < 1:1660029/35‑1 (MQ=255) | TCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATT > REL606/3368393‑3368461 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |