New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 255937 = | 63 (0.610) | 13 (0.150) | 7/40 | NT | 22.5% | coding (477/1056 nt) | dinB | DNA polymerase IV |
? | REL606 | 3367494 = | 37 (0.430) | intergenic (‑80/+27) | yhdN/rplQ | hypothetical protein/50S ribosomal protein L17 |
Only 100 of 140 total aligned reads displayed.
TCGCCAAAATCGCCTCCGACATGAATAAACCCAACGGCCAGTTTGTGATTACGCCGGCAGAAGTTCCGG > REL606/255903‑255971 | tcGCCAAAATCGCCTCCGACATGAATAAACCCTAc > 1:14768326/1‑35 (MQ=255) tcGCCAAAATCGCCTCCGACATGAATAAACCCAAc > 1:16942551/1‑35 (MQ=255) tcGCCAAAATCGCCTCCGACATGAATAAACCCAAc < 1:20524439/35‑1 (MQ=255) tcGCCAAAATCGCCTCCGACATGAATAAACCCAAc < 1:9357260/35‑1 (MQ=255) tcGCCAAAATCGCCTCCGACATGAATAAACCCAAc < 1:12841369/35‑1 (MQ=255) tcGCCAAAATCGCCTCCGACATGAATAAACCCAAc < 1:7848482/35‑1 (MQ=255) ccGCAAAAATCGCCTCCGACATGAATAAACCCAAc < 1:11939357/34‑1 (MQ=255) agagtaatctgaagcaacgtaaaaaaccccgcccc > 1:2447313‑M1/35‑35 (MQ=255) agagtaatctgaagcaacgtaaaaaaacccgcccc < 1:17595087‑M1/1‑1 (MQ=255) agagtaatctgaagcaacgtaaaaaaacccgcccc > 1:10278170‑M1/35‑35 (MQ=255) agagtaatctgaagcaacgtaaaaaaacccgcccc < 1:14759536‑M1/1‑1 (MQ=255) gagtaatctgaagcaacgtaaaaaaccccgcccCg > 1:7259565‑M1/34‑35 (MQ=255) gagtaatctgaagcaacgtaaaaaaacccgcccCg < 1:10098887‑M1/2‑1 (MQ=255) cGCCAAAATCGCCTCCGACATGAATAAACCCAACg < 1:10314719/35‑1 (MQ=255) cGCCAAAATCGCCTCCGACATGAATAAACCCAACg > 1:10515472/1‑35 (MQ=255) cGCCAAAATCGCCTCCGACATGAATAAACCCAACg < 1:5859579/35‑1 (MQ=255) gCCAAAATCGCCTCCGACATGAATAAACCCAACgg < 1:9717136/35‑1 (MQ=255) gCCAAAATCGCCTCCGACATGAATAAACCCAACgg < 1:2658614/35‑1 (MQ=255) gCCAAAATCGCCTCCGACATGAATAAACCCAACgg < 1:12205081/35‑1 (MQ=255) agtaatctgaagcaacgtaaaaaaacccgcccCgg < 1:13568273‑M1/3‑1 (MQ=255) agtaatctgaagcaacgtaaaaaaacccgcccCgg > 1:19636477‑M1/33‑35 (MQ=255) agtaatctgaagcaacgtaaaaaaacccgcccCgg < 1:20176470‑M1/3‑1 (MQ=255) agtaatctgaagcaacgtaaaaaaacccgcccCgg > 1:4052160‑M1/33‑35 (MQ=255) gtaatctgaagcaacgtaaaaaaacccgcccCGGc < 1:19595732‑M1/4‑1 (MQ=255) gtaatctgaagcaacgtaaaaaaacccgcccCGGc < 1:6218336‑M1/4‑1 (MQ=255) ccAAAATCGCCTCCGACATGAATAAACCCAACGGc > 1:13916569/1‑35 (MQ=255) ccAAAATCGCCTCCGACATGAATAAACCCAACGGc > 1:6423633/1‑35 (MQ=255) ccAAAATCCCCTCCGACATGAATAAACACAACGGc < 1:19823467/35‑1 (MQ=37) cAAAATCGCCTCCGACATGAATAAACCCAACGGcc > 1:11141612/1‑35 (MQ=255) cAAAATCGCCTCCGACATGAATAAACCCAACGGcc > 1:16061371/1‑35 (MQ=255) aaaaaTCGCCTCCGACATGAATAAACCCACCGGcc < 1:5556624/34‑1 (MQ=255) aaaaTCGCCTCCGACATGAATAAACCCAACGGCCa > 1:800764/1‑35 (MQ=255) aaaaTCGCCTCCGACATGAATAAACCCAACGGCCa > 1:16979444/1‑35 (MQ=255) aaaTCGCCTCCGACATGAATAAACCCAACGGCCAg > 1:5340462/1‑35 (MQ=255) aTCGCCTCCGACATGAATAAACCCAACGGCCAGtt > 1:14516070/1‑35 (MQ=255) aTCGCCTCCGACATGAATAAACCCAACGGCCAGtt > 1:9532272/1‑35 (MQ=255) gCCTCCGACATGAATAAACCCAACGGCCAGTTtgt > 1:11418279/1‑35 (MQ=255) gCCTCCGACATGAATAAACCCAACGGCCAGTTtgt > 1:17782082/1‑35 (MQ=255) gCCTCCGACATGAATAAACCCAACGGCCAGTTtgt > 1:13031558/1‑35 (MQ=255) ccTCCGACATGAATAAACCCAACGGCCAGTTtgtg > 1:16322265/1‑35 (MQ=255) ccTCCGACATGAATAAACCCAACGGCCAGTTtgtg > 1:12569312/1‑35 (MQ=255) cTCCGACATGAATAAACCCAACGGCCAGTTtgtgc > 1:1738134/1‑34 (MQ=255) cTCCGACATGAATAAACCCAACGGCCAGTTTGTGa > 1:9907448/1‑35 (MQ=255) cTCCGACATGAATAAACCCAACGGCAAGTTTGTGa < 1:14436674/35‑1 (MQ=255) tCCGACGTGAATAAACCCAACGGCCAGTTTGTGAt > 1:19017756/1‑35 (MQ=255) tCCGACATGAATAAACCCAACGGCCAGTTTGTGAt > 1:3590571/1‑35 (MQ=255) tCCGACATGAATAAACCCAACGGCCAGTTTGTGAt > 1:19756976/1‑35 (MQ=255) ccGACATGAATAAACCCAACGGCCAGTTTGTGAtt > 1:18497752/1‑35 (MQ=255) cGACATGAATAAACCCAACGGCCAGTTTGTGATTa > 1:4105474/1‑35 (MQ=255) gACATGAATAAACCCAACGGCCAGTTTGTGATTAc > 1:10617483/1‑35 (MQ=255) gACATGAATAAACCCAACGGCCAGTTTGTGATTAc > 1:3564381/1‑35 (MQ=255) aCATGAATAAACCCAACGGCCAGTTTGTGATTACg > 1:8478446/1‑35 (MQ=255) aCATGAATAAACCCAACGGCCAGTTTGTGATTACg > 1:18616144/1‑35 (MQ=255) aCATGAATAAACCCAACGGCCAGTTTGTGATTACg > 1:13767802/1‑35 (MQ=255) cATGAATAAACCCAACGGCCAGTTTGTGATTACGc > 1:6115664/1‑35 (MQ=255) aTGAATAAACCCAACGGCCAGTTTGTGATTACGcc > 1:14659485/1‑35 (MQ=255) aTGAATAAACCCAACGGCCAGTTTGTGATTACGcc > 1:13880431/1‑35 (MQ=255) aTGAATAAACCCAACGGCCAGTTTGTGATTACGcc > 1:7144929/1‑35 (MQ=255) tGAATAAACCCAACGGCCAGTTTGTGATTACGCCg > 1:4610762/1‑35 (MQ=255) tGAATAAACCCAACGGCCAGTTTGTGATTACGCCg > 1:10145990/1‑35 (MQ=255) tGAATAAACCCAACGGCCAGTTTGTGATTACGCCg > 1:16501758/1‑35 (MQ=255) aaaaaacccccccCGGCCAGTTTGTGATTACGCCg > 1:6717212‑M1/14‑35 (MQ=255) aaaacccccccCGGCCAGTTTGTGATTACGCCGGc > 1:11208643‑M1/12‑35 (MQ=255) aaTAAACCCAACGGCCAGTTTGTGATTACGCCGGc > 1:15437254/1‑35 (MQ=255) aTAAACCCAACGGCCAGTTTGTGATTACGCCgggc > 1:5072534/1‑33 (MQ=255) aTAAACCCAACGGCCAGTTTGTGATTACGCCggga > 1:6218459/1‑33 (MQ=255) aTAAACCCAACGGCCAGTTTGTGATTACGCCGGCa > 1:10650259/1‑35 (MQ=255) aTAAACCCAACGGCCAGTTTGTGATTACGCCGGCa > 1:20195141/1‑35 (MQ=255) aTAAACCCAACGGCCAGTTTGTGATTACGCCGGCa > 1:636794/1‑35 (MQ=255) tAAACCCAACGGCCAGTTTGTGATTACGCCGGcgg > 1:7088707/1‑33 (MQ=255) tAAACCCAACGGCCAGTTTGTGATTACGCCGGGAg > 1:10786637/1‑35 (MQ=255) tAAACCCAACGGCCAGTTTGTGATTACGCCGGCAg > 1:18023070/1‑35 (MQ=255) tAAACCCAACGGCCAGTTTGTGATTACGCCGGCAg > 1:1106709/1‑35 (MQ=255) cacccccccCGGCCAGTTTGTGATTACGCCGGCAg > 1:6650613‑M1/10‑35 (MQ=255) aacccccccCGGCCAGTTTGTGATTACGCCGGCAg > 1:13804474‑M1/10‑35 (MQ=255) ccccccccCGGCCAGTTTGTGATTACGCCGGCAGa > 1:593729‑M1/9‑35 (MQ=255) acccccccCGGCCAGTTTGTGATTACGCCGGCAGa > 1:7540865‑M1/9‑35 (MQ=255) acccccccCGGCCAGTTTGTGATTACGCCGGCAGa > 1:2988450‑M1/9‑35 (MQ=255) aaaCCCAACGGCCAGTTTGTGATTACGCCGGCAGa > 1:16677456/1‑35 (MQ=255) aaaCCCAACGGCCAGTTTGTGATTACGCCGGCAGa > 1:13364235/1‑35 (MQ=255) cccccccCGGCCAGTTTGTGATTACGCCGGCAGaa > 1:13294908‑M1/8‑35 (MQ=255) cccccccCGGCCAGTTTGTGATTACGCCGGCAGaa > 1:2118317‑M1/8‑35 (MQ=255) aaCCCAACGGCCAGTTTGTGATTACGCCGGCAGaa > 1:945250/1‑35 (MQ=255) ccccccCGGCCAGTTTGTGATTACGCCGGCAGAAg > 1:16182297‑M1/7‑35 (MQ=255) aCCCAACGGCCAGTTTGTGATTACGCCGGCAGAAg > 1:11709307/1‑35 (MQ=255) aCCCAACGGCCAGTTTGTGATTACGCCGGCAGAAg > 1:8619637/1‑35 (MQ=255) cccccCGGCCAGTTTGTGATTACGCCGGCAGAAGt > 1:8065194‑M1/6‑35 (MQ=255) cccccCGGCCAGTTTGTGATTACGCCGGCAGAAGt > 1:4569320‑M1/6‑35 (MQ=255) ccccCGGCCAGTTTGTGATTACGCCGGCAGAAGtt > 1:18597655‑M1/5‑35 (MQ=255) ccccCGGCCAGTTTGTGATTACGCCGGCAGAAGtt > 1:2002588‑M1/5‑35 (MQ=255) ccAACGGCCAGTTTGTGATTACGCCGGCAGGAGtt > 1:17279393/1‑35 (MQ=255) ccAACGGCCAGTTTGTGATTACGCCGGCAGAAggt > 1:20333399/1‑33 (MQ=255) ccAACGGCCAGTTTGTGATTACGCCGGCAGAAGtt > 1:19440893/1‑35 (MQ=255) cccCGGCCAGTTTGTGATTACGCCGGCAGAAGTTc > 1:6814676‑M1/4‑35 (MQ=255) ccCGGCCAGTTTGTGATTACGCCGGCAGAAGTTcc > 1:8084689‑M1/3‑35 (MQ=255) ccCGGCCAGTTTGTGATTACGCCGGCAGAAGTTcc > 1:15709084‑M1/3‑35 (MQ=255) ccCGGCCAGTTTGTGATTACGCCGGCAGAAGTTcc > 1:17411677‑M1/3‑35 (MQ=255) cCGGCCAGTTTGTGATTACGCCGGCAGAAGTTCCg > 1:16614247‑M1/2‑35 (MQ=255) CGGCCAGTTTGTGATTACGCCGGCAGAAGTTCCgg > 1:17970301‑M1/1‑35 (MQ=255) CGGCCAGTTTGTGATTACGCCGGCAGAAGTTCCgg > 1:1930745‑M1/1‑35 (MQ=255) | TCGCCAAAATCGCCTCCGACATGAATAAACCCAACGGCCAGTTTGTGATTACGCCGGCAGAAGTTCCGG > REL606/255903‑255971 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |