New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 9904 | 112 (1.090) | 9 (0.100) | 5/42 | NT | 11.5% | intergenic (+13/+22) | mogA/yaaH | molybdenum cofactor biosynthesis protein/conserved inner membrane protein associated with acetate transport |
? | REL606 | 4001993 = | 40 (0.440) | intergenic (+10/‑32) | tatC/tatD | TatABCE protein translocation system subunit/DNase, magnesium‑dependent |
GCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/9868‑9904 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgCCCGTCAGGGCGGTTGTCATATGGAGTACAGGAT > REL606/4001993‑4002026 GCAAGACGCGACGTTAGCGAATAAAAAAATCCCCC < 1:7776460/35‑1 GCAAGACGCGACGTTAGCGAATAAAAAAATCCCCC < 1:7321397/35‑1 GCAAGACGCGACGTTAGCGAATAAAAAAATCCCCC < 1:7002199/35‑1 GCAAGACGCGACGTTAGCGAATAAAAAAATCCCCC > 1:6972409/1‑35 GCAAGACGCGACGTTAGCGAATAAAAAAATCCCCC < 1:4243219/35‑1 AAGACGCGACGTTAGCGAATAAAAAAATCCCTCCG > 1:5978324/1‑35 AAGACGCGACGTTAGCGAATAAAAAAATCCCCCCG < 1:17067420/35‑1 AAAAAAATCCCCCCGCCCGTCAGGGCGGTTGTCAT < 1:5907627/35‑1 AAAAAAATCCACCCGCCCGTCAGGGCGGTTGTCAT < 1:10391100/35‑1 AAAAAATCCCCCCGCCCGTCAGGGCGGTTGTCATA < 1:982103/35‑1 cAAATCCCCCCGCCCGTCAGGGCGGTTGTCATATG < 1:20251378/34‑1 AAAATCCACCCGCCCGTCAGGGCGGTTGTCATATG < 1:9230855/35‑1 AAAATCCACCCGCCCGTCAGGGCGGTTGTCATATG < 1:2063598/35‑1 AAATCCACCCGCCCGTCAGGGCGGTTGTCATATGG < 1:16888636/35‑1 ATCCCCCCGCCCGTCAGGGCGGTTGTCATATGGAG < 1:10981631/35‑1 ATCCACCCGCCCGTCAGGGCGGTTGTCATATGGAG < 1:17899403/35‑1 TCCCCCCGCCCGTCAGGGCGGTTGTCATATGGAGT < 1:16254958/35‑1 TCCACCCGCCCGTCAGGGCGGTTGTCATATGGAGT < 1:19881034/35‑1 TCCACCCGCCCGTCAGGGCGGTTGTCATATGGAGT < 1:11331416/35‑1 ccaCCCGCCCGTCAGGGCGGTTGTCATATGGAGTA < 1:19118505/32‑1 aCCCCCGCCCGTCAGGGCGGTTGTCATATGGAGTA < 1:4623038/34‑1 CCCCCCGCCCGTCAGGGCGGTTGTCATATGGAGTA < 1:19672628/35‑1 CCCCCCGCCCGTCAGGGCGGTTGTCATATGGAGTA < 1:4161896/35‑1 CCCCCCGCCCGTCAGGGCGGTTGTCATATGGAGTA < 1:13694448/35‑1 tCCCGCCCGTCAGGGCGGTTGTCATATGGAGTACA < 1:16689180/34‑1 agCCGCCCGTCAGGGCGGTTGTCATATGGAGTACA < 1:17622551/33‑1 CCCCGCCCGTCAGGGCGGTTGTCATATGGAGTACA < 1:5335882/35‑1 CCCGCCCGTCAGGGCGGTTGTCATATGGAGTACAG < 1:7352113/35‑1 CCCGCCCGTCAGGGCGGTTGTCATATGGAGTACAG < 1:20309400/35‑1 CCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGG < 1:18288882/35‑1 CCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGG < 1:7377565/35‑1 CGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGA < 1:18379752/35‑1 GCCCGTCAGGGCGGTTGTCATATGGAGTACAGGAT < 1:14523210/35‑1 GCCCGTCAGGGCGGTTGTCATATGGAGTACAGGAT < 1:14494418/35‑1 GCCCGTCAGGGCGGTTGTCATATGGAGTACAGGAT < 1:19598121/35‑1 GCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/9868‑9904 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgCCCGTCAGGGCGGTTGTCATATGGAGTACAGGAT > REL606/4001993‑4002026 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |