New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 957480 =61 (0.590)11 (0.150) 3/34 NT 20.1% coding (960/1293 nt) serS seryl‑tRNA synthetase
?REL606 = 3467034 44 (0.600)coding (963/2319 nt) yhgF predicted transcriptional accessory protein

Only 100 of 137 total aligned reads displayed.

CTGGTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCACTGGCG  >  REL606/957446‑957514
                                  |                                  
tgcccgtaacctgcacgatctgctgatggcggccc                                    >  1:6481313‑M1/35‑35 (MQ=255)
tgcccgtaacctgcacgatctgctgatggcggccc                                    >  1:16508302‑M1/35‑35 (MQ=255)
cTGGTCATGCAGAAAAAGTCCTGCAGTTGCTGGGc                                    >  1:10246712/1‑35 (MQ=255)
 tGGTCATGCAGAAAAAGTCCTGCAGTTGCTGGGcc                                   >  1:7563044/1‑35 (MQ=255)
 gcccgtaacctgcacgatctgctgatggcggcccc                                   >  1:6677603‑M1/34‑35 (MQ=255)
 gcccgtaacctgcacgatctgctgatggcggcccc                                   <  1:13640429‑M1/2‑1 (MQ=255)
  ggTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCt                                  >  1:18767959/1‑35 (MQ=255)
  ggTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCt                                  <  1:11970132/35‑1 (MQ=255)
  ggTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCt                                  <  1:12379085/35‑1 (MQ=255)
  ggTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCt                                  <  1:16414591/35‑1 (MQ=255)
  cccgtaacctgcacgatctgctgatggcgggcccc                                  <  1:10090166‑M1/3‑2 (MQ=255)
  cccgtaacctgcacgatctgctgatggcggccCCt                                  >  1:19872111‑M1/33‑35 (MQ=255)
  cccgtaacctgcacgatctgctgatggcggccCCt                                  >  1:16760381‑M1/33‑35 (MQ=255)
   gTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTg                                 <  1:5967897/35‑1 (MQ=255)
   ccgtaacctgcacgatctgctgatggcggcccccg                                 <  1:7678820‑M1/4‑3 (MQ=255)
   ccgtaacctgcacgatctgctgatggcggccCCTg                                 >  1:14336147‑M1/32‑35 (MQ=255)
   cagtaacctgcacgatctgctgatggcggccCCTg                                 >  1:14346288‑M1/32‑35 (MQ=255)
    tCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGc                                >  1:14378387/1‑35 (MQ=255)
    tCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGc                                >  1:19449611/1‑35 (MQ=255)
    tCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGc                                <  1:8286092/35‑1 (MQ=255)
     gtaacctgcacgatctgctgatggcggccCCTGcc                               >  1:16572623‑M1/30‑35 (MQ=255)
     cATGCATAAAAAGTCCTGCAGTTGCTGGGCCTGcc                               >  1:18502882/1‑35 (MQ=255)
     cATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGcc                               >  1:17157874/1‑35 (MQ=255)
      taacctgcacgatctgctgatggcggccCCTGccg                              >  1:5656658‑M1/29‑35 (MQ=255)
      aTGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGccg                              >  1:16316256/1‑35 (MQ=255)
       tGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGccgt                             >  1:8580565/1‑35 (MQ=255)
        gCAGAAAAAGTCCTGCAGTTGCTGGGCCTGccgta                            >  1:15224197/1‑35 (MQ=255)
         cAGAAAAAGTCCTGCAGTTGCTGGGCCTGccgtac                           >  1:15422025/1‑35 (MQ=255)
          aGAAAAAGTCCTGCAGTTGCTGGGCCTGccgtacc                          >  1:14608181/1‑35 (MQ=255)
          aGAAAAAGTCCTGCAGTTGCTGGGCCTGccgtacc                          >  1:16643755/1‑35 (MQ=255)
            aaaaaGTCCTGCAGTTGCTGGGCCTGccgtaccgt                        >  1:4072049/1‑35 (MQ=255)
             aaaaGTCCTGCATTTGCTGGGCCTGccgtaccgta                       >  1:1942963/1‑35 (MQ=255)
             aaaaGTCCTGCAGTTGCTGGGCCTGgcgtaccgta                       >  1:4539349/1‑35 (MQ=255)
             aaaaGTCCTGCAGTTGCTGGGCCTGccgtaccgta                       >  1:18421923/1‑35 (MQ=255)
             aaaaGTCCTGCAGTTGCTGGGCCTGccgtaccgta                       >  1:11308325/1‑35 (MQ=255)
             aaaaGTCCTGCAGTTGCTGGGCCTGccgtaccgta                       >  1:16894135/1‑35 (MQ=255)
              aaaGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaa                      >  1:4231008/1‑35 (MQ=255)
              aaaGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaa                      >  1:12116035/1‑35 (MQ=255)
               aaGTCCTGCAGTTGCTGGGCCTGccgtaccgtaga                     >  1:17703947/1‑33 (MQ=255)
               aaGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaaa                     >  1:9656127/1‑35 (MQ=255)
               aaGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaaa                     >  1:17716489/1‑35 (MQ=255)
               aaGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaaa                     >  1:923847/1‑35 (MQ=255)
               aaGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaaa                     >  1:10055642/1‑35 (MQ=255)
                aGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaaaa                    >  1:16026350/1‑35 (MQ=255)
                aGTCCTGCAGTTGCTGGGCCTGCCGTACCGTaaaa                    >  1:13708521/1‑35 (MQ=255)
                  tCCTGCAGTTGCTGGGCCTGCCGTACCGTAAAatc                  >  1:1014092/1‑35 (MQ=255)
                  tCCTGCAGTTGCTGGGCCTGCCGTACCGTAAAatc                  >  1:8954073/1‑35 (MQ=255)
                   ccTGCAGTTGCTGGGCCTGCCGTACCGTAAAatca                 >  1:8256955/1‑35 (MQ=255)
                   ccTGCAGTTGCTGGGCCTGCAGTACCGTAAAatca                 <  1:5209627/35‑1 (MQ=255)
                    cTGCAGTTGCTGGGCCTGCCGTACCGTAAAatcat                >  1:10827860/1‑35 (MQ=255)
                    cTGCAGTTGCTGGGCCTGCCGTACCGTAAAatcat                >  1:13169633/1‑35 (MQ=255)
                     tGCAGTTGCTGGGCCTGCCGTACCGTAAAatcatc               >  1:11403151/1‑35 (MQ=255)
                     tGCAGTTGCTGGGCCTGCCGTACCGTAAAatcatc               >  1:7730122/1‑35 (MQ=255)
                     tGCAGTTGCTGGGCATGCCGTACCGTAAAatcatc               <  1:965755/35‑1 (MQ=255)
                      gCAGTTGCTGGGCCTGCCGTACCGTAAAAACATcc              >  1:20006896/1‑35 (MQ=255)
                       cAGTTGCTGGGCCTGCCGTACCGTAAAATCATCCt             >  1:10003715/1‑35 (MQ=255)
                        aGTTGCTGGGCCTGCCGTACCGTAAAATCATCCtt            >  1:13256789/1‑35 (MQ=255)
                        aGTTGCTGGGCCTGCCGTACCGTAAAATCATCCtt            >  1:2140167/1‑35 (MQ=255)
                        aGTTGCTGGGCCTGCCGTACCGTAAAATCATCCtt            >  1:6352817/1‑35 (MQ=255)
                         gtgggggccCCTGCCGTACCGTAAAATCATCCttt           >  1:1087860‑M1/10‑35 (MQ=255)
                         gtggcgggcCCTGCCGTACCGTAAAATCATCCttt           >  1:6469349‑M1/10‑35 (MQ=255)
                         gTTGCTGGGCCTGCCGTACCGTAAAATCATCCttt           >  1:6549689/1‑35 (MQ=255)
                          ttGCTGGGCCTGCCGTACCGTAAAATCATCCTTTg          >  1:6286895/1‑35 (MQ=255)
                          ttGCTGGGCCTGCCGTACCGTAAAATCATCCTTTg          >  1:1730940/1‑35 (MQ=255)
                          tggcggccCCTGCCGTACCGTAAAATCATCCTTTg          >  1:808803‑M1/9‑35 (MQ=255)
                          tggcggccCCTGCCGTACCGTAAAATCATCCTTTg          >  1:574800‑M1/9‑35 (MQ=255)
                           tgcgggcCCTGCCGTACCGTAAAATCATCCTTTGc         >  1:7786850‑M1/8‑35 (MQ=255)
                           ggcggccCCTGCCGTACCGTAAAATCATCCTTTGc         >  1:5843004‑M1/8‑35 (MQ=255)
                            gctgccCCTGCCGTACCGTAAAATCATCCTTTGCa        >  1:5439144‑M1/7‑35 (MQ=255)
                            gCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCa        >  1:19709940/1‑35 (MQ=255)
                            gCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCa        >  1:7228655/1‑35 (MQ=255)
                            gCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCa        >  1:15595906/1‑35 (MQ=255)
                            gCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCa        >  1:2902501/1‑35 (MQ=255)
                             cTGGGCCTGCCGTACCGTAAAATCATCCTTTGCAc       >  1:12015333/1‑35 (MQ=255)
                             cTGGGCCTGCCGTACCGTAAAATCATCCTTTGCAc       >  1:16007116/1‑35 (MQ=255)
                             cTGGGCCTGCCGTACCGTAAAATCATCCTTTGCAc       >  1:8473145/1‑35 (MQ=255)
                             cTGGGCCTGACGTACCGTAAAATCATCCTTTGCAc       <  1:6688009/35‑1 (MQ=255)
                              tggcCCTGCCGTACCGTAAAATCATCCTTTGCACt      >  1:10910113‑M1/5‑35 (MQ=255)
                              tGGGCCTGCCGTACCGTAAAATCATCCTTTGCACt      >  1:10244831/1‑35 (MQ=255)
                              tGGGCCTGCCGTACCGTAAAATCATCCTTTGCACt      >  1:14075640/1‑35 (MQ=255)
                              ggccCCTGCCGTACCGTAAAATAATCCTTTGCACt      >  1:2268640‑M1/5‑35 (MQ=255)
                               gtgCCTGCCGTACCGTAAAATCATCCTTTGCACTg     <  1:8157236/33‑1 (MQ=255)
                               gggCCTGCCGTACCGTAAAATCATCCTTTGCACTg     >  1:2927071/1‑35 (MQ=255)
                               gggCCTGCCGTACCGTAAAATCATCCTTTGCACTg     >  1:19484392/1‑35 (MQ=255)
                               gggCCTGCCGTACCGTAAAATCATCCTTTGCACTg     >  1:12798383/1‑35 (MQ=255)
                               gggCCTGCCGTACCGTAAAATCATCCTTTGCACTg     >  1:18448571/1‑35 (MQ=255)
                               ggcCCTGCCGTACCGTAAAATCATCCTTTGCACTg     >  1:4567363‑M1/4‑35 (MQ=255)
                               gccCCTGCCGTACCGTAAAATCATCCTTTGCACTg     >  1:14960093‑M1/4‑35 (MQ=255)
                               gccCCTGCCGTACCGTAAAATCATACTTTGCACTg     >  1:2389180‑M1/4‑35 (MQ=255)
                                ggCCTGCCGTACCGTAAAATCATCCTTTGCACTgg    >  1:4519893/1‑35 (MQ=255)
                                ggCCTGCCGTACCGTAAAATCATCCTTTGCACTgg    >  1:20275055/1‑35 (MQ=255)
                                ggCCTGCCGTACCGTAAAATCATCCTTTGCACTgg    >  1:16876736/1‑35 (MQ=255)
                                gcCCTGCCGTACAGTAAAATCATCCTTTGCACTgg    >  1:17430073‑M1/3‑35 (MQ=255)
                                ccCCTGCCGTACCGTAAAATCATCCTTTGCACTgg    >  1:18929419‑M1/3‑35 (MQ=255)
                                 gCCTGCCGTACCGTAAAATCATCCTTTGCACTGGc   >  1:19033451/1‑35 (MQ=255)
                                 cCCTGCCGTACCGTAAAATCATCCTTTGCACTGGc   >  1:3469077‑M1/2‑35 (MQ=255)
                                  CCTGCCTTACCGTAAAATCATCCTTTGCACTGGCg  <  1:7109773‑M1/35‑1 (MQ=255)
                                  CCTGCCGTACCGTAAAATCATCCTTTGCACTGGCg  >  1:12982154‑M1/1‑35 (MQ=255)
                                  CCTGCCGTACCGTAAAATCATCCTTTGCACTGGCg  <  1:20233852‑M1/35‑1 (MQ=255)
                                  CCTGCCGTACCGTAAAATCATCCTTTGCACTGGCg  <  1:17315581‑M1/35‑1 (MQ=255)
                                  |                                  
CTGGTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCACTGGCG  >  REL606/957446‑957514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.