New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3281469 = | 113 (1.100) | 21 (0.220) | 7/44 | NT | 18.2% | coding (62/288 nt) | yhbH | predicted ribosome‑associated, sigma 54 modulation protein |
? | REL606 | = 4043982 | 85 (0.900) | coding (42/1404 nt) | yihO | predited transporter |
GGTCAAAATATTGCTCAAGTTTGGCAAATTTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3281504‑3281469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGGAAAAAATCGCCTATGGTATGGGCGACGTTGGT < REL606/4043982‑4043949 GGTCAAAATATTGCTCAAGTTTGGCAAATTTGGCT > 1:10069788/1‑35 GGTCAAAATATTGCTCAAGTTTGGCAAATTTGGCT > 1:8824707/1‑35 GGTCAAAATATTGCTCAAGTTTGGCAAATTTGGCT > 1:19663820/1‑35 GGTCAAAATATTGCTCAAGTTTGGCAAATTTGGCT > 1:11813290/1‑35 GGTCAAAATATTGCTCAAGTTTGGCAAATTTGGCT < 1:7163442/35‑1 GGTCAAAATATTGCTCAAGTTTGGCAAATTTGGCT > 1:1340365/1‑35 GGTCAAAATATTGCTCAAGTTTGGCAAATTTGGCT < 1:8417392/35‑1 GGTCAAAATATTGCTCAAGTTTGGCAAATTTGGCT < 1:17360505/35‑1 GGTCAAAATATTGCTCAAGTTTGGCAAATTTGGCT < 1:5833547/35‑1 gtaAAAATATTGCTCAAGTTTGGCAAATTTGGCTG < 1:14940784/32‑1 GTCAAAATATTGCTCAAGTTTGGCAAATTTGGCTG > 1:4228198/1‑35 GTCAAAATATTGCTCAAGTTTGGCAAATTTGGCTG < 1:11015315/35‑1 GTCAAAATATTGCTCAAGTTTGGCAAATTTGGCTG > 1:19329214/1‑35 GTCAAAATATTGCTCAAGTTTGGCAAATTTGGCTG > 1:7751660/1‑35 GTCAAAATATTGCTCAAGTTTGGCAAATTTGGCTG > 1:18534189/1‑35 GTCAAAATATTGCTCAAGTTTGGCAAATTTGGCTG < 1:16903856/35‑1 CAAAATATTGCTCAAGTTTGGCAAATTTGGCTGGa > 1:588280/1‑34 CAAAATATTGCTCAAGTTTGGCAAATTTGGCTGGa > 1:12902545/1‑34 CAAAATATTGCTCAAGTTTGGCAAATTTGGCTGGa > 1:10888773/1‑34 CAAAATATTGCTCAAGTTTGGCAAATTTGGCTGGG > 1:16189878/1‑35 CAAAATATTGCTCAAGTTTGGCAAATTTGGCTGGG > 1:18123752/1‑35 CAAAATATTGCTCAAGTTTGGCAAATTTGGCTGGG > 1:5664923/1‑35 AAAATATTGCTCAAGTTTGGCAAATTTGGCTGGGA > 1:8675197/1‑35 AAAATATTGCTCAAGTTTGGCAAATTTGGCTGGGA > 1:10826747/1‑35 AAATATTGCTCAAGTTTGGCAAATTTGGCTGGGAg > 1:2209296/1‑34 AAATATTGCTCAAGTTTGGCAAATTTGGCTGGGAc > 1:10845657/1‑34 AAATATTGCTCAAGTTTGGCAAATTTGGCTGGGAA > 1:19362022/1‑35 AATATTGCTCAAGTTTGGCAAATTTGGCTGGGAAA > 1:17865687/1‑35 ATATTGCTCAAGTTTGGCAAATTTGGCTGGGACAA > 1:7973578/1‑35 ATATTGCTCAAGTTTGGCAAATTTGGCTGGGACAA > 1:1606401/1‑35 ATATTGCTCAAGTTTGGCAAATTTGGCTGGGAAAA > 1:9043253/1‑35 TATTGCTCAAGTTTGGCAAATTTGGCTGGGACAAA > 1:14345810/1‑35 TATTGCTCAAGTTTGGCAAATTTGGCTGGGACAAA > 1:625610/1‑35 TATTGCTCAAGTTTGGCAAATTTGGCTGGGAAAAA > 1:9328863/1‑35 TATTGCTCAAGTTTGGCAAATTTGGCTGGAAAAAA > 1:6156943/1‑35 ATTGCTCAAGTTTGGCAAATTTGGCTGGGAAAAAA > 1:4908655/1‑35 TTGCTCAAGTTTGGCAAATTTGGCTGGGACAAAAT > 1:12864044/1‑35 TTGCTCAAGTTTGGCAAATTTGGCTGGGACAAAAT > 1:4785506/1‑35 TTGCTCAAGTTTGGCAAATTTGGCTGGGACAAAAT > 1:6241117/1‑35 TTGCTCAAGTTTGGCAAATTTGGCTGGAAAAAAAT > 1:924299/1‑35 TGCTCAAGTTTGGCAAATTTGGCTGGGACAAAATa > 1:2775335/1‑34 TGCTCAAGTTTGGCAAATTTGGCTGGGACAAAATC > 1:5965406/1‑35 GCTCAAGTTTGGCAAATTTGGCTGGGACAAAATCG > 1:2143180/1‑35 GCTCAAGTTTGGCAAATTTGGCTGGGAAAAAATCG > 1:8944999/1‑35 CTCAAGTTTGGCAAATTTGGCTGGGACAAAATCGC > 1:5780013/1‑35 CTCAAGTTTGGCAAATTTGGCTGGGACAAAATCGC > 1:12247741/1‑35 CTCAAGTTTGGCAAATTTGGCTGGGAAAAAATTGC > 1:12874592/1‑35 CTCAAGTTTGGCAAATTTGGCTGGGAAAAAATCGC > 1:8692780/1‑35 TCAAGTTTGGCAAATTTGGCTGGGAAAAAATCGCg > 1:9068143/1‑34 tggGGGAAAAAATCGCCTATGGTATGGGCGACGTT < 1:982918/32‑1 gggGGGAAAAAATCGCCTATGGTATGGGCGACGTT < 1:4821611/32‑1 ggGGGAAAAAATCGCCTATGGTATGGGCGACGTTG < 1:2024046/33‑1 TGGGAAAAAATCGCCTATGGTATGGGCGACGTTGG > 1:6389363/1‑35 TGGGAAAAAATCGCCTATGGTATGGGCGACGTTGG > 1:16300179/1‑35 GGGAAAAAATCGCCTATGTTATGGGCGACGTTGGT > 1:429827/1‑35 GGGAAAAAATCGCCTATGGTATGGGCGACGTTGGT > 1:7158098/1‑35 GGGAAAAAATCGCCTATGGTATGGGCGACGTTGGT < 1:2438209/35‑1 GGGAAAAAATCGCCTATGGTATGGGCGACGTTGGT > 1:20368352/1‑35 GGGAAAAAATCGCCTATGGTATGGGCGACGTTGGT < 1:2003310/35‑1 GGGAAAAAATCGCCTATGGTATGGGCGACGTTGGT > 1:16019840/1‑35 GGTCAAAATATTGCTCAAGTTTGGCAAATTTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3281504‑3281469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGGAAAAAATCGCCTATGGTATGGGCGACGTTGGT < REL606/4043982‑4043949 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |