New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2789283 | 65 (0.630) | 8 (0.080) | 4/46 | NT | 11.2% | coding (192/1278 nt) | yqcE | predicted transporter |
? | REL606 | 3161174 = | 67 (0.650) | coding (557/1071 nt) | ygjJ | hypothetical protein |
TTCTTTATGCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2789270‑2789283 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGCGACTCCTGCCGGACATCATGATGAAAGCAA > REL606/3161174‑3161207 | TTCTTTATGCCCCCCCCGCGACTCCTGCCGGACAT < 1:6737546/35‑1 TCTTTATGCCCCCCCCGCGACTCCTGCCGGACATC < 1:358603/35‑1 TTATCCCCCCCCCGCGACTCCTGCCGGACATCATG < 1:13670509/35‑1 TTAAGCCCCCCCCGCGACTCCTGCCGGACATCATG < 1:5515565/35‑1 cacCCCCCCCCGCGACTCCTGCCGGACATCATGAT < 1:20557883/32‑1 ataCCCCCCCCGCGACTCCTGCCGGACATCATGAT < 1:4630988/32‑1 agGCCCCCCCCGCGACTCCTGCCGGACATCATGAT < 1:11410107/33‑1 tcgCCCCCCCGCGACTCCTGCCGGACATCATGATG < 1:1979009/32‑1 gaCCCCCCCCGCGACTCCTGCCGGACATCATGATG < 1:615801/33‑1 gGCCCCCCCCGCGACTCCTGCCGGACATCATGATG < 1:5549364/34‑1 aGCCCCCCCCGCGACTCCTGCCGGACATCATGATG < 1:14343630/34‑1 TGCCGCCCCCGCGACTCCTGCCGGACATCATGATG < 1:17579034/35‑1 cCCCCCCCCGCGACTCCTGCCGGACATCATGATGA < 1:14643040/34‑1 gCCCCCCCGCGACTCCTGCCGGACATCATGATGAA < 1:11617578/34‑1 CCCCCCCGCGACTCCTGCCGGACATCATGATGAAA < 1:3216391/35‑1 CCCCCCCGCGACTCCTGCCGGACATCATGATGAAA < 1:13754472/35‑1 CCCCCCCGCGACTACTGCCGGACATCATGATGAAA < 1:6008348/35‑1 gCCCCCGCGACTCCTGCCGGACATCATGATGAAAG < 1:5680410/34‑1 CCCCCGCGACTCCTGCCGGACATCATGATGAAAGC < 1:3766337/35‑1 CCCCCGCGACTCCTGCCGGACATCATGATGAAAGC < 1:13229182/35‑1 CCCCGCGACTCCTGCCGGACATCATGATGAAAGCA < 1:17648253/35‑1 CCCCGCGACTCCTGCCGGACATCATGATGAAAGCA < 1:10811081/35‑1 CCCGCGACTCCTGCCGGACATCATGATGAAAGCAA < 1:16792504/35‑1 CCCGCGACTCCTGCCGGACATCATGATGAAAGCAA < 1:13135272/35‑1 CCCGCGACTCCTGCCGGACATCATGATGAAAGCAA < 1:769005/35‑1 | TTCTTTATGCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2789270‑2789283 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGCGACTCCTGCCGGACATCATGATGAAAGCAA > REL606/3161174‑3161207 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |