New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1306117 = | 70 (0.680) | 13 (0.140) | 4/44 | NT | 14.3% | coding (123/1461 nt) | cls | cardiolipin synthetase |
? | REL606 | 4085858 = | 92 (0.980) | intergenic (+56/‑93) | cpxP/fieF | periplasmic protein combats stress/ferrous iron efflux protein F |
Only 100 of 125 total aligned reads displayed.
TAATTCCGACTAACGGCAGAATGTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTT > REL606/1306083‑1306151 | aatTCCGACTAACGGCAGAATGTAAATAATCAACa < 1:13962563/35‑1 (MQ=255) atTCCGACTAACGGCAGAATGTAAATAATCAACAg < 1:8819563/35‑1 (MQ=255) atTCCGACTAACGGCAGAATGTAAATAATCAACAg < 1:8424435/35‑1 (MQ=255) atTCCGACTAACGGCAGAATGTAAATAATCAACAg > 1:7914696/1‑35 (MQ=255) atTCCGACTAACGGCAGAATGTAAATAATCAACAg < 1:3596789/35‑1 (MQ=255) ttCCGCCTAACGGCAGAATGTAAATAATCAACAGc < 1:18797506/35‑1 (MQ=255) ttCCGACTAACGGCAGAATGTAAATAATCAACAGc < 1:1060207/35‑1 (MQ=255) ttCCGACTAACGGCAGAATGTAAATAATCAACAGc > 1:15783378/1‑35 (MQ=255) ttCCGACTAACGGCAGAATGTAAATAATCAACAGc < 1:14305290/35‑1 (MQ=255) ttCCGACTAACGGCAGAATGTAAATAATCAAAAGc > 1:1115156/1‑35 (MQ=255) tCCGACTAACGGCAGAATGTAAATAATCAACAGcc > 1:6066159/1‑35 (MQ=255) ccGACTAACGGCAGAATGTAAATAATTAACAGCCa > 1:17587474/1‑35 (MQ=255) ccGACTAACGGCAGAATGTAAATAATCAACAGCCa > 1:12195265/1‑35 (MQ=255) ccGACTAACGGCAGAATGTAAATAATCAACAGCCa > 1:1923148/1‑35 (MQ=255) cGACTAACGGCAGAATGTAAATAATCAACAGCCAg > 1:445457/1‑35 (MQ=255) cGACTAACGGCAGAATGTAAATAATCAACAGCCAg > 1:13627162/1‑35 (MQ=255) gACTAACGGCAGAATGTAAATAATCAACAGCCAgg > 1:5237698/1‑35 (MQ=255) gACTAACGGCAGAATGTAAATAATCAACAGCCAgg > 1:13422261/1‑35 (MQ=255) aCTAACGGCAGAATGTAAATAATCAACAGCCAGGc > 1:8668645/1‑35 (MQ=255) aCTAACGGCAGAATGTAAATAATCAACAGCCAGGc > 1:208230/1‑35 (MQ=255) aCTAACGGCAGAATGTAAATAATCAACAGCCAGGc > 1:12964549/1‑35 (MQ=255) cTAACGGCAGAATGTAAATAATCAACAGCCAGGcc > 1:6409886/1‑35 (MQ=255) cTAACGGCAGAATGTAAATAATCAACAGCCAGGcc > 1:639000/1‑35 (MQ=255) cTAACGGCAGAATGTAAATAATCAACAGCCAGGcc > 1:20052813/1‑35 (MQ=255) tAACGGCAGGATGTAAATAATCAACAGCCAGGCCa > 1:6639860/1‑35 (MQ=255) tAACGGCAGAATGTAAATAATCAACAGCCAGGCCa > 1:14046735/1‑35 (MQ=255) tAACGGCAGAATGTAAATAATCAACAGCCAGGCCa > 1:5578413/1‑35 (MQ=255) tAACGGCAGAATGTAAATAATCAACAGCCAGGCCa > 1:18824461/1‑35 (MQ=255) aaCGGCAGAATGTAAATAATCAACAGCCAGGCCAt > 1:11746193/1‑35 (MQ=255) aaCGGCAGAATGTAAATAATCAACAGCCAGGCCAt > 1:18149631/1‑35 (MQ=255) aCGGCAGAATGTAAATAATCAACAGCCAGGCCATc > 1:11184754/1‑35 (MQ=255) aCGGCAGAATGTAAATAATCAACAGCCAGGCCATc > 1:13093839/1‑35 (MQ=255) cGGCAGAATGTAAATAATCAACAGCCAGGCCATcg > 1:6571096/1‑35 (MQ=255) cGGCAGAATGTAAATAATCAACAGCCAGGCCATcg > 1:11338357/1‑35 (MQ=255) cGGCAGAATGTAAATAATCAACAGCCAGGCCATcg > 1:7303895/1‑35 (MQ=255) ggCAGAATGTAAATAATCAACAGCCAGGCCATcgc > 1:5771919/1‑35 (MQ=255) ggCAGAATGTAAATAATCAACAGCCAGGCCATcgc > 1:3965696/1‑35 (MQ=255) ggCAGAATGTAAATAATCAACAGCCAGGCCATcgc > 1:10172412/1‑35 (MQ=255) gCAGAATGTAAATAATCAACAGCCAGGCCATcgcg > 1:16830826/1‑35 (MQ=255) gCAGAATGTAAATAATCAACAGCCAGGCCATcgcg > 1:11102731/1‑35 (MQ=255) cAGAATGTAAATAATCAACAGCCAGGCCATCGCgg > 1:14823592/1‑35 (MQ=255) cAGAATGTAAATAATCAACAGCCAGGCCATCGCgg > 1:9087939/1‑35 (MQ=255) cAGAATGNAAATAATCAACAGCCAGGCCATCGCgg > 1:19714174/1‑35 (MQ=255) aGAATGTAAATAATCAACAGCCAGGCCATCGCGGa > 1:1833002/1‑35 (MQ=255) aGAATGTAAATAATCAACAGCCAGGCCATCGCGGa > 1:8766759/1‑35 (MQ=255) aGAATGTAAATAATCAACAGCCAGGCCATCGCGGa > 1:8076877/1‑35 (MQ=255) gAATGTAAATAATCAACAGCCAGGCCATCGCGGAg > 1:16491697/1‑35 (MQ=255) aataaaaaaacccccCAGCCAGGCCATCGCGGAgg > 1:9171267‑M1/16‑35 (MQ=255) aaTGTAAATAATCAACAGCCAGGCCATCGCGGGgg > 1:12385662/1‑35 (MQ=255) aaTGTAAATAATCAACAGCCAGGCCATCGCGGAgg > 1:5651100/1‑35 (MQ=255) aaTGTAAATAATCAACAGCCAGGCCATCGCGGAgg > 1:7135469/1‑35 (MQ=255) aaTGTAAATAATCAACAGCCAGGCCATCGCGGAgg > 1:3587260/1‑35 (MQ=255) aTGTAAATAATCAACAGCCAGGCCATCGCGGAggg > 1:7382513/1‑35 (MQ=255) aTGTAAATAATCAACAGCCAGGCCATCGCGGAggg > 1:3334017/1‑35 (MQ=255) aTGTAAATAATCAACAGCCAGGCCATCGCGGAggg > 1:19019299/1‑35 (MQ=255) taaaaaaacccccCAGCCAGGCCATCGCGGAGGGa > 1:17184403‑M1/14‑35 (MQ=255) tGTAAATAATCAACAGCCAGGCCATTGCGGAGGGa > 1:165259/1‑35 (MQ=255) tGTAAATAATCAACAGCCAGGCCATCGCGGAGGGa > 1:13016304/1‑35 (MQ=255) gTAAATAATCAACAGCCAGGCCATCGCGGAGGGaa > 1:2542325/1‑35 (MQ=255) tAAATAATCAACAGCCAGGCCATCGCGGAGGGAAc > 1:2146022/1‑35 (MQ=255) tAAATAATCAACAGCCAGGCCATCGCGGAGGGAAc > 1:914983/1‑35 (MQ=255) aaaaaacccccCAGCCAGGCCATCGCGGAGGGAAc > 1:12491167‑M1/12‑35 (MQ=255) aaaTAATCAACAGCCAGGCCATCGCGGAGGGAACt > 1:16850131/1‑35 (MQ=255) aaaTAATCAAAAGCCAGGCCATCGCGGAGGGAACt < 1:15272088/35‑1 (MQ=255) aataatCAACAGCCAGGCCATCGCGGAGGGAACTg > 1:11023934/1‑35 (MQ=255) aataatCAACAGCCAGGCCATCGCGGAGGGAACTg > 1:6209943/1‑35 (MQ=255) aaaaaccccCAGCCAGGCCATCGCGGAGGGAACTg > 1:6439238‑M1/10‑35 (MQ=255) ataatCAACAGCCAGGCCATCGCGGAGGGAACTgc > 1:10541197/1‑35 (MQ=255) ataatCAACAGCCAGGCCATCGCGGAGGGAACTgc > 1:5521550/1‑35 (MQ=255) ataatCAACAGCCAGGCCATCGCGGAGGGAACTgc > 1:4441361/1‑35 (MQ=255) aaacccccCAGCCAGGCCATCGCGGAGGGAACTgc > 1:1968520‑M1/9‑35 (MQ=255) taatCAACAGCCAGGCCATCGCGGAGGGAACTgcg > 1:15985468/1‑35 (MQ=255) cacccccCAGCCAGGCCATCGCGGAGGGAACTgcg > 1:7444298‑M1/8‑35 (MQ=255) caaccccCAGCCAGGCCATCGCGGAGGGAACTgcg > 1:2733948‑M1/8‑35 (MQ=255) accccccCAGCCAGGCCATCGCGGAGGGAACTgcg > 1:18458544‑M1/8‑35 (MQ=255) aacccccCAGCCAGGCCATCGCGGAGGGAACTgcg > 1:9057604‑M1/8‑35 (MQ=255) aacccccCAGCCAGGCCATCGCGGAGGGAACTgcg > 1:14261561‑M1/8‑35 (MQ=255) acccccCAGCCAGGCCATCGCGGAGGGAACTgcgc > 1:4291942‑M1/7‑35 (MQ=255) aatCAACAGCCAGGCCATCGCGGAGGGAACTgcgc > 1:9440827/1‑35 (MQ=255) aatCAACAGCCAGGCCATCGCGGAGGGAACTgcgc > 1:13022158/1‑35 (MQ=255) aatCAACAGCCAGGCCATCGCGGAGGGAACTgcgc > 1:7867192/1‑35 (MQ=255) cccccCAGCCAGGCCATCGCGGAGGGAACTGcgcg > 1:8349529‑M1/6‑35 (MQ=255) atCAACAGCCAGGCCATCGCGGAGGGAACTGcgcg > 1:3220529/1‑35 (MQ=255) ccccCAGCCAGGCCATCGCGGAGGGAACTGCGcgt > 1:6593275‑M1/5‑35 (MQ=255) cccCAGCCAGGCCATCGCGGAGGGAACTGCGcgtc > 1:12083878‑M1/4‑35 (MQ=255) cccCAGCCAGGCCATCGCGGAGGGAACTGCGcgtc > 1:17602010‑M1/4‑35 (MQ=255) cccCAGCCAGGCCATCGCGGAGGGAACTGCGcgtc > 1:1483987‑M1/4‑35 (MQ=255) cAACAGCCAGGCCATCGCGGAGGGAACTGCGcgtc > 1:9245089/1‑35 (MQ=255) cAACAGCCAGGCCATCGCGGAGGGAACTGCGcgtc > 1:1845119/1‑35 (MQ=255) ccCAGCCAGGCCATCGCGGAGGGAACTGCGcgtcg > 1:10384456‑M1/3‑35 (MQ=255) ccCAGCCAGGCCATCGCGGAGGGAACTGCGcgtcg > 1:4683898‑M1/3‑35 (MQ=255) ccCAGCCAGGCCATCGCGGAGGGAACTGCGcgtcg > 1:4614712‑M1/3‑35 (MQ=255) acCAGCCAGGCCATCGCGGAGGGAACTGCGcgtcg > 1:11228668‑M1/3‑35 (MQ=255) aaCAGCCAGGCCATCGCGGAGGGAACTGCGcgtcg > 1:7309884/1‑35 (MQ=255) aaCAGCCAAGCCATCGCGGAGGGAACTGCGcgtcg > 1:7136675/1‑35 (MQ=255) aCAGCCAGGCCATCGCGGAGGGAACTGCGcgtcgt > 1:11250049/1‑35 (MQ=255) CAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGtt < 1:15948393‑M1/35‑1 (MQ=255) CAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGtt > 1:2289914‑M1/1‑35 (MQ=255) CAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGtt > 1:5157731‑M1/1‑35 (MQ=255) CAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGtt < 1:17816486‑M1/35‑1 (MQ=255) | TAATTCCGACTAACGGCAGAATGTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTT > REL606/1306083‑1306151 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |