New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3182813 = | 111 (1.080) | 7 (0.110) | 3/30 | NT | 10.7% | coding (97/405 nt) | yqjE | conserved inner membrane protein |
? | REL606 | 4217451 = | 48 (0.750) | coding (886/2097 nt) | yjbH | predicted porin |
GATTAGCTTTTTCCTCTTCCAGCTCAACCACCGCCAGCCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3182855‑3182813 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgcagGATGCCATTTTGCAGCATTCGGTGGTGGCGAATC > REL606/4217451‑4217484 GATTAGCTTTTTCCTCTTCCAGCTCAACCACCGCC > 1:2236562/1‑35 GATTAGCTTTTTCCTCTTCCAGCTCAACCACCGCC > 1:14545320/1‑35 GATTAGCTTTTTCCTCTTCCAGCTCAACCACCGCC > 1:7119030/1‑35 GATTAGCTTTTCCCTCTTCCAGCTCAACCACCGCC > 1:20017082/1‑35 ATTAGCTTTTTCCTCTTCCAGCTCAACCACCGCCA > 1:362108/1‑35 ATTAGCTTTTTCCTCTTCCAGCTCAACCACCGCCA > 1:5604179/1‑35 TTAGCTTTTTCCTCTTCCAGCTCAACCACCGCCAG > 1:3150588/1‑35 TTAGCTTTTTCCTCTTCCAGCTCAACCACCGCCAG > 1:11642786/1‑35 TTAGCTTTTTCCTCTTCCAGCTCAACCACCGCCAG > 1:12337473/1‑35 TAGCTTTTTCCTCTTCCAGCTCAACCACCGCCAGC > 1:20202219/1‑35 TAGCTTTTTCCTCTTCCAGCTCAACCACCGCCAGC > 1:20041979/1‑35 TAGCTTTTTCCTCTTCCAGCTCAACCACCGCCAGC > 1:4646566/1‑35 TAGCTTTTTCCTCTTCCAGCTCAACCACCGCCAGC > 1:12370186/1‑35 TAGCTTTTTCCTCTTCCAGCTCAACCACCGCCAGC > 1:13926113/1‑35 AGCTTTTTCCTCTTCCAGCTCAACCACCGCCAGCC > 1:4584669/1‑35 GCTTTTTCCTCTTCCAGCTCAACCACCGCCAGCCG > 1:6281375/1‑35 GCTTTTTCCTCTTCCAGCTCAACCACCGCCAGCCG > 1:892523/1‑35 CTTTTTCCTCTTCCAGCTCAACCACCGCCAGCCGC > 1:13735515/1‑35 CTTTTTCCTCTTCCAGCTCAACCACCGCCAGCCGC > 1:11489207/1‑35 CTTTTTCCTCTTCCAGCTCAACCACCGCCAGCCGC > 1:15927377/1‑35 TTTTTCCTCTTCCAGCTCAACCACCGCCAGCCGCg > 1:5234219/1‑34 TTTTTCCTCTTCCAGCTCAACCACCGCCAGCCGCA > 1:14389773/1‑35 TTTTTCCTCTTCCAGCTCAACCACCGCCAGCCGCA > 1:12041130/1‑35 TTTTTCCTCTTCCAGCTCAACCACCGCCAGCCGCA > 1:1205091/1‑35 TTTTCCTCTTCCAGCTCAACCACCGCCAGCCGCAG > 1:7626004/1‑35 TTTTCCTCTTCCAGCTCAACCACCGCCAGCCGCAG > 1:11348455/1‑35 TTTTCCTCTTCCAGCTCAACCACCGCCAGCCGCAG > 1:15521155/1‑35 ACCACCCCCAGCCGCAGGATGCCATTTTGCAGCAT < 1:7869168/35‑1 ACCACCCCCAGCCGCAGGATGCCATTTTGCAGCAT < 1:15620863/35‑1 CCACCCCCAGCCGCAGGATGCCATTTTGCAGCATT < 1:10915846/35‑1 CCACCCCCAGCCGCAGGATGCCATTTTGCAGCATT < 1:15772595/35‑1 CCACCCCCAGCCGCAGGATGCCATTTTGCAGCATT < 1:6813745/35‑1 ccgCGCCAGCCGCAGGATGCCATTTTGCAGCATTC < 1:9484261/32‑1 CACCCCCAGCCGCAGGATGCCATTTTGCAGCATTC < 1:17463502/35‑1 CACCCCCAGCCGCAGGATGCCATTTTGCAGCATTC < 1:14111346/35‑1 cccCCAGCCGCAGGATGCCATTTTGCAGCATTCGG < 1:12304022/32‑1 ccCCAGCCGCAGGATGCCATTTTGCAGCATTCGGT < 1:16929797/33‑1 ccCCAGCCGCAGGATGCCATTTTGCAGCATTCGGT < 1:8258401/33‑1 cCCAGCCGCAGGATGCCATTTTGCAGCATTCGGTG < 1:15624186/34‑1 cCCAGCCGCAGGATGCCATTTTGCAGCATTCGGTG < 1:14814415/34‑1 CCAGCCGCAGGATGCCATTTTGCAGCATTCGGTGG < 1:9519770/35‑1 CAGCCGCAGGATGCCATTTTGCAGCATTCGGTGGg > 1:4289825/1‑34 CAGCCGCAGGATGCCATTTTGCAGCATTCGGTGGT < 1:10772918/35‑1 CAGCCGCAGGATGCCATTTTGCAGCATTCGGTGGT > 1:8966212/1‑35 CAGCCGCAGGATGCCATTTTGCAGCATTCGGTGGT > 1:12974149/1‑35 CAGCCGCAGGATGCCATTTTGCAGCATTCGGTGGT > 1:3905925/1‑35 AGCCGCAGGATGCCATTTTGCAGCATTCGGTGGgg > 1:8984967/1‑33 AGCCGCAGGATGCCATTTTGCAGCATTCGGTGGgg > 1:2106277/1‑33 AGCCGCAGGATGCCATTTTGCAGCATTCGGTGGTG < 1:14362088/35‑1 GCCGCAGGATGCCATTTTGCAGCATTCGGTGGTGG < 1:8767692/35‑1 nCGCAGGATGCCATTTTGCAGCATTCGGTGGGGGC > 1:11618529/2‑35 CCGCAGGATGCCATTTTGCAGCATTGGGTGGTGGC < 1:5762364/35‑1 CCGCAGGATGCCATTTTGCAGCATTCGGTGGTGGC < 1:20008728/35‑1 CCGCAGGATGCCATTTTGCAGCATTCGGTGGTGGC < 1:5423457/35‑1 CCGCAGGATGCCATTTTGCAGCATTCGGTGGGGGC > 1:12859723/1‑35 CGCAGGATGCCATTTTGCAGCATTCGGTGGTGGCG < 1:1709604/35‑1 CGCAGGATGCCATTTTGCAGCATTCGGTGGTGGCG < 1:12689657/35‑1 CGCAGGATGCCATTTTGCAGCATTCGGTGGTGGCG < 1:5356119/35‑1 CGCAGGATGCCATTTTGCAGCATTCGGTGGTGGCG > 1:7524933/1‑35 CGCAGGATGCCATTTTGCAGCATTCGGTGGTGGCG < 1:7351796/35‑1 CGCAGGATGCCATTTTGCAGCATTCGGTGGGGGCG > 1:5110685/1‑35 GCAGGATGCCATTTTGCAGCATTCGGTGGTGGCGA < 1:14177963/35‑1 GCAGGATGCCATTTTGCAGCATTCGGTGGTGGCGA < 1:15931137/35‑1 CAGGATGCCATTTTGCAGCATTCGTTGGTGGCGAA > 1:8051516/1‑35 CAGGATGCCATTTTGCAGCATTCGGTGGTGGCGAA < 1:13978718/35‑1 CAGGATGCCATTTTGCAGCATTCGGTGGTGGCGAA < 1:3646744/35‑1 AGGATGCCATTTTGCAGCATTCGGTGGTGGGGAAT > 1:6138134/1‑35 AGGATGCCATTTTGCAGCATTCGGTGGTGGCGAtt < 1:20273890/35‑3 AGGATGCCATTTTGCAGCATTCGGTGGTGGCGAAT < 1:14281202/35‑1 AGGATGCCATTTTGCAGCATTCGGTGGTGGCGAAT < 1:12827251/35‑1 AGGATGCCATTTTGCAGCATTCGGTGGTGGCGAAT < 1:19647158/35‑1 GGATGCCATTTTGCAGCATTCGGTGGTGGCGAAac > 1:4966879/1‑33 GGATGCCATTTTGCAGCATTCGGTGGTGGCGAATC < 1:3415044/35‑1 GGATGCCATTTTGCAGCATTCGGTGGTGGCGAATC < 1:16789438/35‑1 GATTAGCTTTTTCCTCTTCCAGCTCAACCACCGCCAGCCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3182855‑3182813 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgcagGATGCCATTTTGCAGCATTCGGTGGTGGCGAATC > REL606/4217451‑4217484 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |