New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3411408 = | 52 (0.510) | 21 (0.310) | 4/32 | NT | 37.7% | coding (302/1023 nt) | yheT | predicted hydrolase |
? | REL606 | 3433812 = | NA (NA) | noncoding (418/768 nt) | IS1 | repeat region |
Only 100 of 1001 total aligned reads displayed.
CACCGCTGCATCCGCGAAAATGCATCACCACGCCCAGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3411449‑3411408 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccagcGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG > REL606/3433812‑3433845 CCGCTGCATCCGCGAAAATGCATCACCACGCCCAG > 1:7255956/1‑35 CGCTGCATCCGCGAAAATGCATCACCACGCCCAGC > 1:6117544/1‑35 cCTGCATCCGCGAAAATGCATCACCACGCCCAGCC < 1:10752545/34‑1 TGCATCCGCGAAAATGCATCACCACGCCCAGCCAG > 1:5010575/1‑35 GCATCCGCGAAAATGCATCACCACGCCCAGCCAGC > 1:8977969/1‑35 CCACCCCCAGCCAGCGCTGGCGCGATTTAGCCCCG < 1:12802081/35‑1 cccCCCAGCCAGCGCTGGCGCGATTTAGCCCCGAC < 1:4833089/32‑1 cccCCCAGCCAGCGCTGGCGCGATTTAGCCCCGAC < 1:18341208/32‑1 accCCCAGCCAGCGCTGGCGCGATTTAGCCCCGAC < 1:12485944/32‑1 ccCCCAGCCAGCGCTGGCGCGATTTAGCCCCGACA < 1:5468669/33‑1 ccCCCAGCCAGCGCTGGCGCGATTTAGCCCCGACA < 1:8637643/33‑1 ccCCCAGCCAGCGCTGGCGCGATTTAGCCCCGACA < 1:4387211/33‑1 ccCCCAGCCAGCGCTGGCGCGATTTAGCCCCGACA < 1:19527763/33‑1 ccCCCAGCCAGCGCTGGCGCGATTTAGCCCCGACA < 1:9139309/33‑1 ccCCCAGCCAGCGCTGGCGCGATTTAGCCCCGACA < 1:14476632/33‑1 cCCCAGCCAGCGCTGGCGCGATTTAGCCCCGACAg < 1:19917495/34‑2 cCCCAGCCAGCGCTGGCGCGATTTAGCCCCGACAT < 1:5868060/34‑1 cCCCAGCCAGCGCTGGCGCGATTTAGCCCCGACAT < 1:15132551/34‑1 cCCCAGCCAGCGCTGGCGCGATTTAGCCCCGACAT < 1:5215652/34‑1 cCCCAGCCAGCGCTGGCGCGATTTAGCCCCGACAT < 1:9751765/34‑1 cCCCAGCCAGCGATGGCGCGATTTAGCCCCGACAT < 1:13195564/34‑1 aCCCAGCCAGCGCTGGCGCGATTTAGCCCCGACAT < 1:9847370/34‑1 CCCAGCCAGCGCGGGCGCGATTTAGCCCCGACATA < 1:10316838/35‑1 CCAGCCAGCGCTGGCGCGATTTAGCCCCGACATAG < 1:16895018/35‑1 CCAGCCAGCGCTGGCGCGATTTAGCCCCGACATAG < 1:15558102/35‑1 CCAGCCAGCGCTGGCGCGATTTAGCCCCGACATAG < 1:15299587/35‑1 CCAGCCAGCGCTGGCGCGATTTAGCCCCGACATAG < 1:8780986/35‑1 CCAGCCAGCGCGGGCGCGATTTAGCCCCGACATAG < 1:15876038/35‑1 CAGCCAGCGCTGGCGCGATTTAGCCCCGACATAGa > 1:4731470/1‑34 CAGCCAGCGCTGGCGCGATTTAGCCCCGACATAGC > 1:3013625/1‑35 CAGCCAGCGCTGGCGCGATTTAGCCCCGACATAGC > 1:20499653/1‑35 CAGCCAGCGCTGGCGCGATTTAGCCCCGACATAGC > 1:16286724/1‑35 CAGCCAGCGCTGGCGCGATTTAGCCCCGACATAGC > 1:11513153/1‑35 CAGCCAGCGCTGGCGCGATTTAGCCCCGACATAGC > 1:1174390/1‑35 AGCCAGCGCTGGCGCGATTTAGCCCCGACATAGCC > 1:2149827/1‑35 AGCCAGCGCTGGCGCGATTTAGCCCCGACATAGCC > 1:5952337/1‑35 AGCCAGCGCTGGCGCGATTTAGCCCCGACATAGCC > 1:3919026/1‑35 AGCCAGCGCTGGCGCGATTTAGCCCCGACATACCC > 1:1502332/1‑35 GCCAGCGCTGGCGCTATTTAGCCCCGACATAGCCC > 1:1762670/1‑35 GCCAGCGCTGGCGCGATTTAGCCCCGACATAGCCC < 1:7858705/35‑1 GCCAGCGCTGGCGCGATTTAGCCCCGACATAGCCC < 1:3472648/35‑1 GCCAGCGCTGGCGCGATTTAGCCCCGACATAGCCC > 1:18881422/1‑35 GCCAGCGCTGGCGCGATTTAGCCCCGACATAGCCC < 1:6385045/35‑1 GCCAGCGCTGGCGCGATTTAGCCCCGACATAGCCC < 1:19301885/35‑1 GCCAGCGCTGGCGCGATTTAGCCCCGACATAGCCC > 1:4229051/1‑35 GCCAGCGCTGGCGCGATTTAGCCCCGACATAGCCC < 1:16461955/35‑1 CCAGCGCTGGCGCGATTTAGCCCCGACATAGCCCC > 1:13802233/1‑35 CCAGCGCTGGCGCGATTTAGCCCCGACATAGCCCC > 1:3226259/1‑35 CCAGCGCTGGCGCGATTTAGCCCCGACATAGCCCC > 1:11115685/1‑35 CCAGCGCTGGCGCGATTTAGCCCCGACATAGCCCC > 1:14805908/1‑35 CCAGCGCTGGCGCGATTTAGCCCCGACATAGCCCC > 1:18623391/1‑35 CCAGCGCTGGCGCGATTTAGCCCCGACATAGCCCC > 1:16792728/1‑35 CCAGCGCTGGCGCGATTTAGCCCCGACATAGCCCC > 1:6499161/1‑35 CCAGCGCTGGCGCGATTTAGCCCCGACATAGCCCC > 1:18064493/1‑35 CAGCGCTGGCGCGATTTAGCCCCGACATAGCCCCA > 1:2821730/1‑35 CAGCGCTGGCGCGATTTAGCCCCGACATAGCCCCA > 1:5653225/1‑35 CAGCGCTGGCGCGATTTAGCCCCGACATAGCCCCA > 1:7454517/1‑35 CAGCGCTGGCGCGATTTAGCCCCGACATAGCCCCA > 1:6675643/1‑35 CAGCGCTGGCGCGATTTAGCCCCGACATAGCCCCA > 1:248323/1‑35 CAGCGCTGGCGCGATTTAGCCCCGACATAGCCCCA > 1:2302099/1‑35 CAGCGCTGGCGCGATTTAGCCCCGACATAGCCCCA > 1:12137606/1‑35 CAGCGCTGGCGCGATTTAGCCCCGACATAGCCCCA > 1:20188382/1‑35 CAGCGCTGGCGCGATTTAGCCCCGACATAGCCCCA > 1:19749790/1‑35 AGCGCTGGCGCGATTTAGCCCCTACATAGCCCCAC > 1:10190832/1‑35 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC < 1:8000676/35‑1 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC > 1:7710983/1‑35 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC > 1:7562923/1‑35 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC > 1:12285656/1‑35 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC > 1:8277902/1‑35 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC > 1:8459121/1‑35 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC < 1:11327560/35‑1 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC > 1:15455341/1‑35 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC > 1:2663871/1‑35 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC < 1:17423034/35‑1 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC > 1:203492/1‑35 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC < 1:19414712/35‑1 AGCGCTGGCGCGATTTAGCCCCGACATAGCCCCAC > 1:19103130/1‑35 GCGCTGGCGCGATTTAGCCCCGACATAGCCCCACT > 1:3719327/1‑35 GCGCTGGCGCGATTTAGCCCCGACATAGCCCCACT < 1:4113415/35‑1 GCGCTGGCGCGATTTAGCCCCGACATAGCCCCACT < 1:14008999/35‑1 GCGCTGGCGCGATTTAGCCCCGACATAGCCCCACT < 1:10537228/35‑1 GCGCTGGCGCGATTTAGCCCCGACATAGCCCCACT > 1:17861984/1‑35 GCGCTGGCGCGATTTAGCCCCGACATAGCCCCACT > 1:17144146/1‑35 GCGCGGGCGCGATTTAGCCCCGACATAGCCCCACT < 1:4587031/35‑1 CGCTGGCGCTATTTAGCCCCGACATAGCCCCACTG > 1:6253769/1‑35 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG > 1:10992205/1‑35 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG > 1:10004200/1‑35 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG > 1:11906535/1‑35 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG > 1:95126/1‑35 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG < 1:8155034/35‑1 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG > 1:12626311/1‑35 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG > 1:7008104/1‑35 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG < 1:13010203/35‑1 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG > 1:13317404/1‑35 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG > 1:13680635/1‑35 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG < 1:14230572/35‑1 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG > 1:16062983/1‑35 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG > 1:16646345/1‑35 CGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG < 1:18207104/35‑1 CGCGGGCGCGATTTAGCCCCGACATAGCCCCACTG < 1:9265800/35‑1 CACCGCTGCATCCGCGAAAATGCATCACCACGCCCAGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3411449‑3411408 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccagcGCTGGCGCGATTTAGCCCCGACATAGCCCCACTG > REL606/3433812‑3433845 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |