New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2998284 =85 (0.830)9 (0.110) 4/40 NT 12.9% intergenic (+49/‑483) ECB_02798/yeeP conserved hypothetical protein/b1999; predicted GTP‑binding protein
?REL606 3832612 = 51 (0.600)coding (748/1149 nt) dgoD galactonate dehydratase

ATACATGTATTCCCGGTGAAAAAAGACAAAACCCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2998321‑2998284
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGA  >  REL606/3832612‑3832645
                                                                        
ATACATGTATTCCCGGTGAAAAAAGACAAAACCCC                                       >  1:17631922/1‑35
ATACATGTATTCCCGGTGAAAAAAGACAAAACCCC                                       >  1:8433160/1‑35
ATACATGTATTCCCGGTGAAAAAAGACAAAACCCC                                       <  1:11622423/35‑1
ATACATGTATTCCCGGTGAAAAAAGACAAAACCCC                                       >  1:4591879/1‑35
 TACATGTATTCCCGGTGAAAAAAGACAAAACCCCC                                      >  1:8889945/1‑35
 TACATGTATTCCCGGTGAAAAAAGACAAAACCCCC                                      <  1:11221410/35‑1
 TACATGTATTCCCGGTGAAAAAAGACAAAACCCCC                                      <  1:1938826/35‑1
 TACATGTATTCCCGGTGAAAAAAGACAAAACCCCC                                      <  1:403353/35‑1
 TACATGTATTCCCGGTGAAAAAAGACAAAACCCCC                                      <  1:4080851/35‑1
  ACATGTATTCCCGGTGAAAAAAGACAAAACCCCCG                                     <  1:1492043/35‑1
  ACATGTATTCCCGGTGAAAAAAGACAAAACCCCCG                                     >  1:14343696/1‑35
  ACATGTATTCCCGGTGAAAAAAGACAAAACCCCCG                                     >  1:18745471/1‑35
  ACATGTATTCCCGGTGAAAAAAGACAAAACCCCCG                                     >  1:2523564/1‑35
  ACATGTATTCCCGGTGAAAAAAGACAAAACCCCCG                                     <  1:12231641/35‑1
  ACATGTATTCCCGGTGAAAAAAGACAAAACCCCCG                                     <  1:5926344/35‑1
  ACATGTATTCCCGGTGAAAAAAGACAAAACCCCCG                                     <  1:5930719/35‑1
  ACATGTATTCCCGGTGAAAAAAGACAAAACCCCCG                                     <  1:8738197/35‑1
  ACATGTATTCCCGGTGAAAAAAGACAAAACCCCCG                                     >  1:9980880/1‑35
   CATGTATTCCCGGTGAAAAAAGACAAAACCCCCGC                                    <  1:12400335/35‑1
   CATGTATTCCCGGTGAAAAAAGACAAAACCCCCGC                                    >  1:11796275/1‑35
   CATGTATTCCCGGTGAAAAAAGACAAAACCCCCGC                                    >  1:12478098/1‑35
   CATGTATTCCCGGTGAAAAAAGACAAAACCCCCGC                                    >  1:12749919/1‑35
   CATGTATTCCCGGTGAAAAAAGACAAAACCCCCGC                                    >  1:2920309/1‑35
   CATGTATTCCCGGTGAAAAAAGACAAAACCCCCGC                                    >  1:6535847/1‑35
   CATGTATTCCCGGTGAAAAAAGACAAAACCCCCGC                                    >  1:819918/1‑35
   CATGTATTCCCGGTGAAAAAAGACAAAACCCCCGC                                    <  1:10746313/35‑1
   CATGTATTCCCGGTGAAAAAAGACAAAACCCCCGC                                    >  1:17273989/1‑35
   CATGTATTCCCGGTGAAAAAAGACAAAACCCCCGC                                    >  1:16422451/1‑35
                    AAAAAACAAAACCCCCGCCTGCCTCCAGCACGCGT                   <  1:19159772/35‑1
                     AAAAACAAAACCCCCGCCTGCCTCCAGCACGCGTT                  <  1:1931793/35‑1
                     AAAAACAAAACCCCCGCCTGCCTCCAGCACGCGTT                  <  1:8554048/35‑1
                      aaaACAAAACCCCCGCCTGCCTCCAGCACGCGTTT                 <  1:16907034/32‑1
                      aaaACAAAACCCCCGCCTGCCTCCAGCACGCGTTT                 <  1:5510524/32‑1
                      AAGACAAACCCCCCGCCTGCCTCCAGCACGCGTTT                 <  1:12761471/35‑1
                           gAAACCCCCGCCTGCCTCCAGCACGCGTTTAAAAT            <  1:1095693/34‑1
                           cacACCCCCGCCTGCCTCCAGCACGCGTTTAAAAT            <  1:14471366/32‑1
                            acACCCCCGCCTGCCTCCAGCACGCGTTTAAAATC           <  1:6619801/33‑1
                            AAACCCCCGCCTGCCTCCAGCACGCGTTTAAAATC           <  1:8381131/35‑1
                            AAACCCCCCCCTGCCTCCAGCACGCGTTTAAAATC           <  1:6617621/35‑1
                             aaaCCCCGCCTGCCTCCAGCACGCGTTTAAAATCG          <  1:4076652/32‑1
                             AACCCCCGCCTGCCTCCAGCACGCGTTTAAAATCG          <  1:6075725/35‑1
                             AACCCCCGCCTGCCTCCAGCACGCGTTTAAAATCG          <  1:11468886/35‑1
                             AACCCCCCCCTGCCTCCAGCACGCGTTTAAAATCG          <  1:18282012/35‑1
                              gCCCCCGCCTGCCTCCAGCACGCGTTTAAAATCGA         <  1:14204878/34‑1
                              cCCCCCCCCTGCCTCCAGCACGCGTTTAAAATCGA         <  1:6874083/34‑1
                              ACCCCCGCCTGCCTCCAGCACGCGTTTAAAATCGA         <  1:20462952/35‑1
                              ACCCCCGCCTGCCTCCAGCACGCGTTTAAAATCGA         <  1:10052074/35‑1
                              ACCCCCCCCTGCCTCCAGCACGCGTTTAAAATCGA         <  1:17006665/35‑1
                               aCCCCGCCTGCCTCCAGCACGCGTTTAAAATCGAA        <  1:13267694/34‑1
                               CCCCCGCCTGCCTCCAGCACGCGTTTAAAATCGAA        <  1:13987819/35‑1
                               CCCCCGCCTGCCTCCAGCACGCGTTTAAAATCGAA        <  1:11269290/35‑1
                                CCCCGCCTGCCTCCAGCACGCGTTTAAAATCGAAG       <  1:1961231/35‑1
                                CCCCGCCTGCCTCCAGCACGCGTTTAAAATCGAAG       <  1:12447388/35‑1
                                 CCCGCCTGCCTCCAGCACGCGTTTAAAATCGAAGC      <  1:8418771/35‑1
                                 CCCGCCTGCCTCCAGCACGCGTTTAAAATCGAAGC      <  1:8490891/35‑1
                                 CCCGCCTGCCTCCAGCACGCGTTTAAAATCGAAGC      <  1:10462770/35‑1
                                  caGCCTGCCTCCAGCACGCGTTTAAAATCGAAGCG     <  1:6871368/33‑1
                                  CCGCCTGCCTCCAGCACGCGTTTAAAATCGAAGCG     <  1:3470056/35‑1
                                  CCGCCTGCCTCCAGCACGCGTTTAAAATCGAAGCG     >  1:14665207/1‑35
                                   CGCCTGCCTCCAGCACGCGTTTATAATCGAAGCGT    <  1:10473968/35‑1
                                   CGCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGT    <  1:12441920/35‑1
                                   CGCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGT    <  1:12565753/35‑1
                                   CGCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGT    <  1:6095588/35‑1
                                   CGCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGT    >  1:14929973/1‑35
                                    GCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTG   >  1:1112852/1‑35
                                    GCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTG   <  1:857860/35‑1
                                    GCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTG   <  1:6758860/35‑1
                                    GCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTG   <  1:6601392/35‑1
                                    GCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTG   >  1:3890898/1‑35
                                    GCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTG   >  1:3133235/1‑35
                                    GCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTG   <  1:15645860/35‑1
                                    GCCGGCCTCCAGCACGCGTTTAAAATCGAAGCGTG   <  1:15707611/35‑1
                                     CCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGA  >  1:11770032/1‑35
                                     CCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGA  >  1:5315286/1‑35
                                     CCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGA  <  1:4871443/35‑1
                                     CCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGA  >  1:19477418/1‑35
                                     CCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGA  >  1:13356355/1‑35
                                     CCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGA  >  1:1816439/1‑35
                                     CCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGA  >  1:8979146/1‑35
                                                                        
ATACATGTATTCCCGGTGAAAAAAGACAAAACCCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2998321‑2998284
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGA  >  REL606/3832612‑3832645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.