New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1598741 | 60 (0.580) | 10 (0.100) | 3/46 | NT | 15.9% | intergenic (‑61/+28) | ydfI/ydfJ | predicted mannonate dehydrogenase/predicted transporter |
? | REL606 | = 3347592 | 48 (0.490) | coding (552/918 nt) | yhdW | predicted amino‑acid transporter subunit |
AAGCTATATGTTTTGTTATATGAATAAAAATCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1598707‑1598741 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCTCCGGTAAGACAATCCATTCAGCTGGGTTGCTT < REL606/3347592‑3347559 AAGCTATATGTTTTGTTATATGAATAAAAATCCCC < 1:9893666/35‑1 AAGCTATATGTTTTGTTATATGAATAAAAATCCCC > 1:9604283/1‑35 AAGCTATATGTTTTGTTATATGAATAAAAATCCCC > 1:20122305/1‑35 AAGCTATATGTTTTGTTATATGAATAAAAATCCCC > 1:19896564/1‑35 AAGCTATATGTTTTGTTATATGAATAAAAATCCCC > 1:14789048/1‑35 tTAAAAAACCCCCTCCGGTAAGACAATCCATTCAG < 1:10202061/34‑1 tTAAAAAACCCCCTCCGGTAAGACAATCCATTCAG < 1:12349030/34‑1 TAAAAAACCCCCTCCGGTAAGACAATCCATTCAGC < 1:15355956/35‑1 TAAAAAACCCCCTCCGGTAAGACAATCCATTCAGC < 1:4884487/35‑1 AAAAAACCCCCTCCGGTAAGACAATCCATTCAGCT < 1:9104984/35‑1 AAAAAACCCCCTCCGGTAAGACAATCCATTCAGCT < 1:14694821/35‑1 AAAAAACCCCCTCCGGTAAGACAATCCATTCAGCT < 1:16506143/35‑1 AAAACCCCCTCCGGTAAGACAATCCATTCAGCTGG < 1:20260919/35‑1 AAAACCCCCTCCGGTAAGACAATCCATTCAGCTGG < 1:12284684/35‑1 AAAACCCCCTCCGGTAAGACAATCCATTCAGCTGG < 1:19093200/35‑1 aaaCCCCCTCCGGTAAGACAATCCATTCAGCTGGG < 1:11520705/32‑1 aaCCCCCTCCGGTAAGACAATCCATTCAGCTGGGT < 1:2218762/33‑1 ccaCCCTCCGGTAAGACAATCCATTCAGCTGGGTT < 1:9309469/32‑1 cCCCCCTCCGGTAAGACAATCCATTCAGCTGGGTT < 1:19263462/34‑1 aCCCCCTCCGGTAAGACAATCCATTCAGCTGGGTT < 1:16342880/34‑1 CCCCCTCCGGTAAGACAATCCATTCAGCTGGGTTG < 1:7998560/35‑1 CCCTCCGGTAAGACAATCCATTCAGCTGGGTTGCT < 1:56136/35‑1 CCCTCCGGTAAGACAATCCATTCAGCTGGGTTGCT < 1:7496982/35‑1 CCTCCGGTAAGACAATCCATTCAGCTGGGTTGCTT < 1:19589235/35‑1 CCTCCGGTAAGACAATCCATTCAGCTGGGTTGCTT > 1:5561128/1‑35 CCTCCGGTAAGACAATCCATTCAGCTGGGTTGCTT < 1:148485/35‑1 CCTCCGGTAAGACAATCCATTCAGCTGGGTTGCTT < 1:9876757/35‑1 AAGCTATATGTTTTGTTATATGAATAAAAATCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1598707‑1598741 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCTCCGGTAAGACAATCCATTCAGCTGGGTTGCTT < REL606/3347592‑3347559 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |