New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 594300 = | 32 (0.310) | 8 (0.110) | 5/34 | NT | 13.7% | coding (902/2241 nt) | fepA | iron‑enterobactin outer membrane transporter |
? | REL606 | = 3534924 | 78 (1.070) | coding (8/1497 nt) | ftsY | fused Signal Recognition Particle (SRP) receptor: membrane binding protein/conserved protein |
Only 100 of 123 total aligned reads displayed.
CGCGTAGTTCTGGCGATACAGACGGTTGGTTTCATCGCCATATTTCGAGCGGGTATAGGAATCGGAGTT > REL606/594266‑594334 | cgctTAGTTCTGGCGATACAGACGGTTGGTTTCAt < 1:253501/35‑1 (MQ=255) cgcgTAGTTCTGGCGATACAGACGGTTGGTTTCAt < 1:17954647/35‑1 (MQ=255) cgcgTAGTTCTGGCGATACAGACGGTTGGTTTCAt < 1:12382715/35‑1 (MQ=255) cgcgTAGTTCTGGCGATACAGACGGTTGGTTTCAt < 1:13492026/35‑1 (MQ=255) cccagccaggaaaaaaagccacgttttttttcttt > 1:6715112‑M1/35‑35 (MQ=255) cccagccaggaaaaaaagccacgttttttttcttt < 1:25913‑M1/1‑1 (MQ=255) cccagccaggaaaaaaagccacgttttttttcttt < 1:20319642‑M1/1‑1 (MQ=255) cccagccaggaaaaaaagccacgttttttttcttt > 1:1799850‑M1/35‑35 (MQ=255) cccagccaggaaaaaaagccacgttttttttcttt > 1:4397905‑M1/35‑35 (MQ=255) gcgTAGTTCGGGCGATACAGACGGTTGGTTTCATc < 1:656710/35‑1 (MQ=255) ccagccgggaaaaaaagccacgttttttttctttc > 1:16208497‑M1/34‑35 (MQ=255) ccagccaggaaaaaaagccacgttttttttctttc < 1:3715045‑M1/2‑1 (MQ=255) cgTAGTTCTGGCGATACAGACGGTTGGTTTCATCg < 1:8293595/35‑1 (MQ=255) cgTAGTTCTGGCGATACAGACGGTTGGTTTCATCg < 1:8474428/35‑1 (MQ=255) cgTAGTTCTGGCGATACAGACGGTTGGTTTCATCg < 1:3939670/35‑1 (MQ=255) cagccaggaaaaaaagccacgttttttttcttTCg < 1:4512341‑M1/3‑1 (MQ=255) cagccaggaaaaaaagccacgttttttttcttTCg > 1:9659227‑M1/33‑35 (MQ=255) cagccaggaaaaaaagccacgttttttttcttTCg > 1:5119356‑M1/33‑35 (MQ=255) gTAGTTCTGGCGATACAGACGGTTGGTTTCATCGc < 1:14701443/35‑1 (MQ=255) gTAGTTCTGGCGATACAGACGGTTGGTTTCATCGc < 1:4366670/35‑1 (MQ=255) gTAGTTCTGGCGATACAGACGGTTGGTTTCATCGc < 1:13414501/35‑1 (MQ=255) gTAGTTCTGGCGATACAGACGGTTGGTTTCATCGc < 1:2626842/35‑1 (MQ=255) agccaggaaaaaaagccacgttttttttcttTCGc > 1:3759764‑M1/32‑35 (MQ=255) agccaggaaaaaaagccacgttttttttcttTCGc < 1:19505578‑M1/4‑1 (MQ=255) agccaggaaaaaaagccacgttttttttcttTCGc < 1:1509726‑M1/4‑1 (MQ=255) agccaggaaaaaaagccacgttttttttcttTCGc < 1:3774837‑M1/4‑1 (MQ=255) gccaggaaaaaaagccacgttttttttcttTCGcc > 1:18011728‑M1/31‑35 (MQ=255) gccaggaaaaaaagccacgttttttttcttTCGcc < 1:9882835‑M1/5‑1 (MQ=255) gccaggaaaaaaagccacgttttttttcttTCGcc > 1:3603600‑M1/31‑35 (MQ=255) gccaggaaaaaaagccacgttttttttcttTCGcc > 1:15118720‑M1/31‑35 (MQ=255) gccaggaaaaaaagccacgttttttttcttTCGcc < 1:1461539‑M1/5‑1 (MQ=255) gccaggaaaaaaagccacgttttttttcttTCGcc > 1:10645185‑M1/31‑35 (MQ=255) gccaggaaaaaaagccacgttttttttcttTCGcc > 1:5518081‑M1/31‑35 (MQ=255) ccgaggaaaaaaagccacgttttttttcttTCGcc > 1:19972854‑M1/31‑35 (MQ=255) tcaggaaaaaaagccacgttttttttcttTCGCCa > 1:20203490‑M1/30‑35 (MQ=255) ccaggaaaaaaagccacgttttttttcttTCGCCa > 1:10293839‑M1/30‑35 (MQ=255) ccaggaaaaaaagccacgttttttttcttTCGCCa < 1:6389033‑M1/6‑1 (MQ=255) ccaggaaaaaaagccacgttttttttcttTCGCCa < 1:3468440‑M1/6‑1 (MQ=255) ccaggaaaaaaagccacgttttttttcttTCGCCa > 1:6090654‑M1/30‑35 (MQ=255) ccagaaaaaaaagccacgttttttttcttTCGCCa > 1:17912394‑M1/30‑35 (MQ=255) atttCTGGCGATCCAGACGGTTGGTTTCATCGCCa < 1:3233199/33‑1 (MQ=38) aGTTCGGGCGATACAGACGGTTGGTTTCATCGCCa < 1:6604092/35‑1 (MQ=255) gTTCTGGCGATACAGACGGTTGGTTTCATCGCCat < 1:14383291/35‑1 (MQ=255) caggaaaaaaagccacgttttttttcttTCGCCat < 1:3206793‑M1/7‑1 (MQ=255) caggaaaaaaagccacgttttttttcttTCGCCat < 1:814584‑M1/7‑1 (MQ=255) caggaaaaaaagccacgttttttttcttTCGCCat < 1:15097099‑M1/7‑1 (MQ=255) caggaaaaaaagccacgttttttttcttTCGCCat < 1:15297502‑M1/7‑1 (MQ=255) caggaaaaaaagccacgttttttttcttTCGCCat < 1:19270934‑M1/7‑1 (MQ=255) caggaaaaaaagccacgttttttttcttTCGCCat > 1:1855095‑M1/29‑35 (MQ=255) cagaaaaaaaagccacgttttttttcttTCGCCat > 1:16502806‑M1/29‑35 (MQ=255) tcgggCGACACAGACGGTTGGTTTCATCGCCatat < 1:1294475/32‑1 (MQ=37) cAGACGGTTGGTTTCATCGCCATATTTCGAGCggg > 1:1924125/1‑35 (MQ=255) aGACGGTTGGTTTCATCGCCATATTTCGAGCgggg > 1:16863425/1‑34 (MQ=255) gACGGTTGGTTTCATCGCCATATTTCGAGCGGGta > 1:12844511/1‑35 (MQ=255) gACGGTTGGTTTCATCGCCATATTTCGAGCGGGta > 1:8934713/1‑35 (MQ=255) aCGGTTGGTTTCATCGCCATATTTCGAGCGGGtat > 1:9085230/1‑35 (MQ=255) aCGGTTGGTTTCATCGCCATATTTCGAGCGGGtat > 1:6336573/1‑35 (MQ=255) aCGGTTGGTTTCATCGCCATATTTCGAGCGGGtat > 1:14246670/1‑35 (MQ=255) aCGGTTGGTTTCATCGCCATATTTCGAGCGGGtat > 1:919920/1‑35 (MQ=255) aCGGTTGGTTTCATCGCCATATTTCGAGCGGGgat > 1:9975575/1‑35 (MQ=255) cGGTTGGTTTCATCGCCATATTTCGAGCGGGtata > 1:14670785/1‑35 (MQ=255) cGGTTGGTTTCATCGCCATATTTCGAGCGGGtata > 1:6880132/1‑35 (MQ=255) ggttggttTCATCGCCATATTTCGAGCGGGTATAg > 1:3698658/1‑35 (MQ=255) ggttggttTCATCGCCATATTTCGAGCGGGTATAg > 1:5030605/1‑35 (MQ=255) ttttttttttTCGCCATATTTCGAGCGGGTATAgg > 1:3879818‑M1/11‑35 (MQ=255) gttggttTCATCGCCATATTTCGAGCGGGTATAgg > 1:8201258/1‑35 (MQ=255) gttggttTCATCGCCATATTTCGAGCGGGTATAgg > 1:16013846/1‑35 (MQ=255) ttggttTCATCGCCATATTTCGAGCGGGTATAGGa > 1:11659027/1‑35 (MQ=255) ttttttttTCGCCATATTTCGAGCGGGTATAGGaa > 1:11204005‑M1/9‑35 (MQ=255) ggttTCATCGCCATATTTCGAGCGGGTATAGGAAt > 1:4164116/1‑35 (MQ=255) ggttTCATCGCCATATTTCGAGCGGGTATAGGAAt > 1:993792/1‑35 (MQ=255) ggttTCATCGCCATATTTCGAGCGGGTATAGGAAt > 1:18688194/1‑35 (MQ=255) ttttttTCGCCATATTTCGAGCGGGTATAGGAATc > 1:10483898‑M1/7‑35 (MQ=255) ttttttTCGCCATATTTCGAGCGGGTATAGGAATc > 1:13309026‑M1/7‑35 (MQ=255) gttTCATCGCCATATTTCGAGCGGGTATAGGAATc > 1:8057642/1‑35 (MQ=255) gttTCATCGCCATATTTCGAGCGGGTATAGGAATc > 1:12641187/1‑35 (MQ=255) tttttTCGCCATATTTCGAGCGGGTATAGGAATCg > 1:2727194‑M1/6‑35 (MQ=255) tttttTCGCCATATTTCGAGCGGGTATAGGAATCg > 1:5445805‑M1/6‑35 (MQ=255) tttCATCGCCATATTTCGAGCGGGTATAGGAATCg > 1:456118/1‑35 (MQ=255) tttCATCGCCATATTTCGAGCGGGTATAGGAATCg > 1:2906834/1‑35 (MQ=255) ttttTCGCCATATTTCGAGCGGGTATAGGAATCgg > 1:16297001‑M1/5‑35 (MQ=255) ttttTCGCCATATTTCGAGCGGGTATAGGAATCgg > 1:1750447‑M1/5‑35 (MQ=255) ttCATCGCCATATTTCGAGCGGGTATAGGAATCgg > 1:15749926/1‑35 (MQ=255) ttCATCGCCATATTTCGAGCGGGTATAGGAATCgg > 1:16577758/1‑35 (MQ=255) ttCATCGCCATATTTCGAGCGGGTATAGGAATCgg > 1:18516624/1‑35 (MQ=255) tttTCGCCATATTTCGAGCGGGTATAGGAATCGGa > 1:20128146‑M1/4‑35 (MQ=255) tttTCGCCATATTTCGAGCGGGTATAGGAATCGGa > 1:19328951‑M1/4‑35 (MQ=255) tttTCGCCATATTTCGAGCGGGTATAGGAATCGGa > 1:16758680‑M1/4‑35 (MQ=255) tttTCGCCATATTTCGAGCGGGTATAGGAATCGGa > 1:12294432‑M1/4‑35 (MQ=255) tCATCGCCATATTTCGAGCGGGTATAGGAATCGGa > 1:18697669/1‑35 (MQ=255) tCATCGCAATATTTCGAGCGGGTATAGGAATCGGa < 1:5618045/35‑1 (MQ=255) cATCGCCATATTTCGAGCTGGTATAGGAATCGGAg > 1:3911604/1‑35 (MQ=255) TCGCCATATTTCGAGCGGGTATAGGAATCGGAgtg > 1:12518768‑M1/1‑34 (MQ=255) TCGCCATATTTCGAGCGGGTATAGGAATCGGAGtt > 1:7338924‑M1/1‑35 (MQ=255) TCGCCATATTTCGAGCGGGTATAGGAATCGGAGtt > 1:18881853‑M1/1‑35 (MQ=255) TCGCCATATTTCGAGCGGGTATAGGAATCGGAGtt < 1:15393489‑M1/35‑1 (MQ=255) TCGCCATATTTCGAGCGGGTATAGGAATCGGAGtt < 1:11593321‑M1/35‑1 (MQ=255) TCGCCATATTTCGAGCGGGTATAGGAATCGGAGtt < 1:1137864‑M1/35‑1 (MQ=255) TCGCCATATTTCGAGCGGGTATAGGAATCGGAGtt < 1:10005560‑M1/35‑1 (MQ=255) TCGCCATATTTCGAGAGGGTATAGGAATCGGAGtt > 1:8869761‑M1/1‑35 (MQ=255) | CGCGTAGTTCTGGCGATACAGACGGTTGGTTTCATCGCCATATTTCGAGCGGGTATAGGAATCGGAGTT > REL606/594266‑594334 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |