New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1691508 = | 100 (0.970) | 7 (0.100) | 3/34 | NT | 8.7% | intergenic (+43/‑63) | ydgR/gst | putative tripeptide transporter permease/glutathionine S‑transferase |
? | REL606 | = 1806767 | 76 (1.040) | coding (233/1479 nt) | astD | succinylglutamic semialdehyde dehydrogenase |
Only 100 of 184 total aligned reads displayed.
GAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCACTACCATAC > REL606/1691474‑1691542 | tttcccgtttctctggcaataatcgcggttaattc > 1:20014041‑M1/35‑35 (MQ=255) ttacccgtttctctggcaataatcgcggttaattc < 1:15320219‑M1/1‑1 (MQ=255) ttacccgtttctctggcaataatcgcggttaattc < 1:2464727‑M1/1‑1 (MQ=255) ttacccgtttctctggcaataatcgcggttaattc > 1:3615639‑M1/35‑35 (MQ=255) ttacccgtttctctggcaataatcgcggttaattc > 1:15967554‑M1/35‑35 (MQ=255) ttacccgtttctctggcaataatcgcggttaattc > 1:617327‑M1/35‑35 (MQ=255) ttacccgtttctctggcaataatcgcggttaattc > 1:12812304‑M1/35‑35 (MQ=255) ttacccgtttctctggcaataatcgcggttaattc > 1:4508582‑M1/35‑35 (MQ=255) gAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGc > 1:4363960/1‑35 (MQ=255) gAAACTCTTTTACAAACCGCTAACTTTTCGTTAGc < 1:8577613/35‑1 (MQ=255) gAAACTCTTTAAAAAGCCGCTAACTTTTCGTTAGc < 1:11242673/35‑1 (MQ=37) tacccgtttctctggcaataatcgcggttaattCg > 1:15231149‑M1/34‑35 (MQ=255) aaaCTTTTTAAAAAGCCGCTAACTTTTCGTTAGCg < 1:16750737/35‑1 (MQ=25) aaaCTCTTTTACAAGCCGCTAACTTTTCGTTAGCg > 1:9586283/1‑35 (MQ=255) aaaCTCTTTAAAAAGCCGCTAACTTTTCGTTAGCg < 1:13993190/35‑1 (MQ=37) aaCTCTTTTACAAGCCGCTAACTTTTCGTTAGCgg > 1:5820812/1‑35 (MQ=255) aaCTCTTTTACAAGCCGCTAACTTTTCGTTAGCga > 1:15872922/1‑34 (MQ=255) aaCTCTTTTACAAGCCGCTAACTTTTCGTTAGCga > 1:2996157/1‑34 (MQ=255) cccgtttctctggcaataatcgcggttaattCGGc > 1:3806001‑M1/32‑35 (MQ=255) cccgtttctctggcaataatcgcggttaattCGGc < 1:937810‑M1/4‑1 (MQ=255) aCTCTTTTACAAGCCGCTAACTTTTCGCTAGCGGc > 1:18143526/1‑35 (MQ=255) aCTCTTTAAAAAGCCGCTAACTTTTCGTTAGCGGc < 1:13731814/35‑1 (MQ=37) ctctTTTACAAGCCGCTAACTTTTCGTTAGCGGCt > 1:11510685/1‑35 (MQ=255) ccgtttctctggcaataatcgcggttaattCGGCt > 1:15141085‑M1/31‑35 (MQ=255) ccgtttctctggcaataatcgcggttaattCGGCt > 1:16204962‑M1/31‑35 (MQ=255) tctTTAAAAAGCCGCTAACTTTTCGTTAGCGACtt < 1:14493550/35‑1 (MQ=25) cgtttctctggcaataatcgcggttaattTGGCtt < 1:13597224‑M1/6‑1 (MQ=255) cgtttctctggcaataatcgcggttaattCGGCtt > 1:13019330‑M1/30‑35 (MQ=255) cgtttctctggcaataatcgcggttaattCGGCtt < 1:10048728‑M1/6‑1 (MQ=255) gtttctctggcaataatcgcgggtaattCGGCttt < 1:15061296‑M1/7‑1 (MQ=255) ttttACAAGCCGCTAACTTTTCGTTAGCGGCtttt > 1:2243485/1‑35 (MQ=255) ttttACAAGCCGCTAACTTTTCGTTAGCGGCtttt > 1:5083523/1‑35 (MQ=255) ttttACAAGCCGCTAACTTTTCGTTAGCGACtttt > 1:8394358/1‑35 (MQ=255) ttctctggcaataatcgctgttaattCGGCttttt < 1:4040357‑M1/9‑1 (MQ=255) ttctctggcaataatcgcggttaattCGGCttttt < 1:20147565‑M1/9‑1 (MQ=255) ttACAAGCCGCTAACTTTTCGTTAGCGGCtttttt > 1:16295465/1‑35 (MQ=255) ttACAAGCCGCTAACTTTTCGTTAGCGACtttttt > 1:19127038/1‑35 (MQ=255) tctctggcaataatcgcggttaattCGGCtttttt < 1:5205646‑M1/10‑1 (MQ=255) ctctggcaataatcgcggttaattCGGCttttttt < 1:2182189‑M1/11‑1 (MQ=255) aaaaaGCCGCTAACTTTTCGTTAGCGACttttttt < 1:328886/32‑1 (MQ=37) aaaaaGCCGCTAACTTTTCGTTAGCGACttttttt < 1:5981617/32‑1 (MQ=37) tctggcaataatcgcggttaattCGGCtttttttt < 1:14616768‑M1/12‑1 (MQ=255) aaaaGCCGCTAACTTTTCGTTAGCGGCtttttttt < 1:1959193/33‑1 (MQ=255) aCAAGCAGCTAACTTTTCGTTAGCGACtttttttt < 1:5983265/35‑1 (MQ=37) cAAGCCGCTAACTTTTCGTTAGCGGCttttttttt > 1:16945529/1‑35 (MQ=255) cAAGCCGCTAACTTTTCGTTAGCGACttttttttt > 1:13503693/1‑35 (MQ=255) aaaGCCGCTAACTTTTCGTTAGCGACttttttttt < 1:6344080/34‑1 (MQ=255) aaGCCGCTAACTTTTCGTTAGCGGCtttttttttt > 1:3236574/1‑34 (MQ=255) aaGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTg < 1:6738152/35‑1 (MQ=255) aaGCCGCTAACTTTTAGTTAGCGGCTTTTTTTTTg < 1:10061142/35‑1 (MQ=255) ggcaataatcgcggttaattCGgcttttttttttt < 1:8636261‑M1/15‑3 (MQ=255) aGCCGCTAACTTTTCGTTAGCGACTTTTTTTTTGt > 1:15548779/1‑35 (MQ=255) gCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTTtt > 1:16340801/1‑35 (MQ=255) gCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGtt < 1:17617428/35‑1 (MQ=255) gCCGCTAACTTTTCGTTAGCGACTTTTTTTTTGtt > 1:11104609/1‑35 (MQ=255) ccGCTAACTTTTCGTTAGCGACTTTTTTTTTGTTc < 1:17019450/35‑1 (MQ=255) ccGCTAACTTTTCGTTAGCGACTTTTTTTTTGTTc > 1:2796091/1‑35 (MQ=255) caataatcgcggttaattCGGCTTTTTTTTTTTTc < 1:400980‑M1/17‑1 (MQ=255) caataatcgcggttaattCGGCTTTTTTTTTTTTc < 1:16108775‑M1/17‑1 (MQ=255) cGCTAACTTTTCGTTAGCGGCTTTTTTTTTTtttt > 1:20178019/1‑33 (MQ=38) cGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTCa < 1:15605052/35‑1 (MQ=255) cGCTAACTTTTCGTTAGCGACTTTTTTTTTGTTCa < 1:19714470/35‑1 (MQ=255) cGCTAACTTTTCGTTAGCGACTTTTTTTTTGTTCa > 1:8057876/1‑35 (MQ=255) aataatcgcggttaattCGGCTTTTTTTTTTTTCa < 1:8309273‑M1/18‑1 (MQ=255) aataatcgcggttaattCGGCTTTTTTTTTTTTCa < 1:17298197‑M1/18‑1 (MQ=255) gCTAACTTTTCGTTAGCGGCTTTTTTTTTTttttg > 1:4302319/1‑32 (MQ=37) gCTAACTTTTCGTTAGCGACTTTTTTTTTGTTCAg < 1:9639550/35‑1 (MQ=255) ataatcgcggttaattCGGCTTTTTTTTTTTTCAg < 1:19487564‑M1/19‑1 (MQ=255) cTAACTTTTCGTTAGCGGCTTTTTTTTTTTTCAGc > 1:1739134/1‑35 (MQ=255) tAACTTTTCGTTAGCGGCTTTTTTTTTTTTTAGCa > 1:13185316/1‑35 (MQ=37) tAACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCa < 1:1029311/35‑1 (MQ=255) tAACTTTTCGTTAGCGACTTTTTTTTTGTTCAGCa < 1:18885967/35‑1 (MQ=255) aaCTTTTCGTTAGCTGCTTTTTTTTTGTTCAGCaa > 1:7011866/1‑35 (MQ=255) aaCTTTTCGTTAGCGGCTTTTTTTTTTTTTTGCaa > 1:11847617/1‑35 (MQ=25) aaCTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCaa < 1:14547191/35‑1 (MQ=255) aaCTTTTCGTTAGCGACTTTTTTTTTGTTCATCaa > 1:5562415/1‑35 (MQ=38) aCTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAAc < 1:9226824/35‑1 (MQ=255) aCTTTTCGTTAGCGGCTTTTTTTTT‑TTTAGCaaac > 1:19142394/1‑33 (MQ=21) aCTTTTCGTTAGCGACTTTTTTTTTGTTCAGCAAc < 1:13383075/35‑1 (MQ=255) cTTTTCGTTAGCGACTTTTTTTTTGTTCAGCAACg < 1:20550928/35‑1 (MQ=255) ttttCGTTAGCGGCTTTTTTTTTGTTCAGCAACGc < 1:18093844/35‑1 (MQ=255) ttttCGTTAGCGGCTTTTTTTTTGTTCAGCAACGc < 1:3079814/35‑1 (MQ=255) ttttCGTTAGCGGCTTTTTTTTTGTTCAGCAACGc < 1:13582599/35‑1 (MQ=255) tttCGTTAGCGGCTTTTTTTTTTTTTTGCAACGCa > 1:12938480/1‑35 (MQ=25) tttCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCa < 1:10489716/35‑1 (MQ=255) tttCGTTAGCGACTTTTTTTTTGTTCAGCAACGCa < 1:11592226/35‑1 (MQ=255) ttCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCAc < 1:2598179/35‑1 (MQ=255) ttCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCAc < 1:12905833/35‑1 (MQ=255) ttCGTTAGCGACTTTTTTTTTGTTCAGCAACGCAc > 1:10623264/1‑35 (MQ=255) tCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCACt < 1:9061450/35‑1 (MQ=255) tCGTTAGCGACTTTTTTTTTGTTCAGCAACGCACt < 1:16854952/35‑1 (MQ=255) tCGTTAGCGACTTTTTTTTTGTTCAGCAACGCACt > 1:14326701/1‑35 (MQ=255) tCGTTAGCGACTTTTTTTTTGTTCAGCAACGAACt > 1:11370712/1‑35 (MQ=37) cGTTAGCGGCTTTTTTTTTGTTCAGCAACGCACTa < 1:14748810/35‑1 (MQ=255) cGTTAGCGACTTTTTTTTTGTTCAGCAACGCACTa < 1:7145175/35‑1 (MQ=255) gTTAGCGGC‑TTTTTTTTGTTCAGCAACGCACTAcc < 1:759106/35‑1 (MQ=37) gTTAGCGACTTTTTTTTTGTTCAGCAACGCACTAc < 1:5436348/35‑1 (MQ=255) ttAGCGGCTTTTTTTTTGTTCAGCAACGCACTAcc < 1:4997481/35‑1 (MQ=255) aGCGACTTTTTTTTTGTTCAGCAACGCACTACGAt < 1:7936319/35‑1 (MQ=25) CGACTTTTTTTTTGTTCAGCAACGCACTACCATAc > 1:18682827‑M1/1‑35 (MQ=255) | GAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCACTACCATAC > REL606/1691474‑1691542 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |