New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1495445 =79 (0.770)10 (0.110) 4/44 NT 13.0% coding (648/1500 nt) ansP L‑asparagine transporter
?REL606 3277263 = 61 (0.650)coding (763/987 nt) yrbH D‑arabinose 5‑phosphate isomerase

TTTCATTTAATCACCGATAATGGCGGCTTCTTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/1495480‑1495445
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGACGGTGATTTACGCCGTGTCTTCGATATGGGCG  >  REL606/3277263‑3277296
                                                                      
TTTCATTTAATCACCGATAATGGCGGCTTCTTCCC                                     <  1:3064438/35‑1
 TTCATTTAATCCCCGATAATGGCGGCTTCTTCCCC                                    <  1:10306914/35‑1
 TTCATTTAATCACCGATAATGGCGGCTTCTTCCCC                                    <  1:12094359/35‑1
 TTCATTTAATCACCGATAATGGCGGCTTCTTCCCC                                    <  1:2169195/35‑1
                       aGGCTTCTTCCCCGACGGTGATTTACGCCGTGTCT              <  1:4288075/34‑1
                       CGGCTTCTTCCCCGACGGTGATTTACGCCGTGTCT              <  1:20593172/35‑1
                         GCTTTTTCCCCGACGGTGATTTACGCCGTGTCTTC            <  1:11223957/35‑1
                         GCTTCTTCCCCGACGGTGATTTACGCCGTGTCTTC            <  1:2690099/35‑1
                          CTTTTTCCCCGACGGTGATTTACGCCGTGTCTTCG           <  1:8462038/35‑1
                          CTTTTTCCCCGACGGTGATTTACGCCGTGTCTTCG           <  1:11993750/35‑1
                          CTTCTTCCCCGACGGTGATTTACGCCGTGTCTTCG           <  1:8514444/35‑1
                          CTTCTTCCCCGACGGTGATTTACGCCGTGTCTTCG           <  1:7029678/35‑1
                          CTTCTTACCCGACGGTGATTTACGCCGTGTCTTCG           <  1:13371140/35‑1
                           TTCTTCCCCGACGGTGATTTACGCCGTGTCTTCGA          <  1:944810/35‑1
                             CTTCCCCGACGGTGATTTACGCCGTGTCTTCGATA        <  1:8244181/35‑1
                             CTTCCCCGACGGTGATTTACGCCGTGTCTTCGATA        <  1:15063973/35‑1
                              tttCCCGACGGTGATTTACGCCGTGTCTTCGATAT       <  1:11270761/32‑1
                              TTCCCCGACGGTGATTTACGCCGTGTCTTCGATAT       <  1:20022954/35‑1
                               ttCCCGACGGTGATTTACGCCGTGTCTTCGATATG      <  1:2621549/33‑1
                               TCCCCGACGGTGATTTACGCCGTGTCTTCGATATG      <  1:8658172/35‑1
                               TCCCCGACGGTGATTTACGCCGTGTCTTCGATATG      <  1:13811692/35‑1
                                tCCCGACGGTGATTTACGCCGTGTCTTCGATATGG     <  1:11481198/34‑1
                                CCCCGACGGTGATTTACGCCGTGTCTTCGATATGG     <  1:17056051/35‑1
                                CCCCGACGGTGATTTACGCCGTGTCTTCGATATGG     <  1:13128978/35‑1
                                 CCCGACGGTGATTTACGCCGTGTCTTCGATATGGG    <  1:14049030/35‑1
                                  CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC   >  1:1060413/1‑35
                                  CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC   <  1:9141252/35‑1
                                  CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC   <  1:7488057/35‑1
                                  CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC   <  1:566217/35‑1
                                  CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC   <  1:5177673/35‑1
                                  CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC   <  1:20182064/35‑1
                                  CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC   <  1:20141091/35‑1
                                  CCGACGGTGATTTACGCCGTGTCTTCGATATGGGC   >  1:1708441/1‑35
                                  CCGACGGTGATTTACGCCGTGTCTTCGATATAGGC   <  1:15583704/35‑1
                                   CGACGGTGATTTACGCCGTGTCTTCGATATGGGCG  >  1:4439616/1‑35
                                   CGACGGTGATTTACGCCGTGTCTTCGATATGGGCG  <  1:14444920/35‑1
                                   CGACGGTGATTTACGCCGTGTCTTCGATATGGGCG  >  1:11355178/1‑35
                                   CGACGGTGATTTACGCCGTGTCTTCGATATGGGCG  >  1:16937385/1‑35
                                                                      
TTTCATTTAATCACCGATAATGGCGGCTTCTTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/1495480‑1495445
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGACGGTGATTTACGCCGTGTCTTCGATATGGGCG  >  REL606/3277263‑3277296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.