New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 681365 | 68 (0.660) | 10 (0.180) | 3/26 | NT | 18.0% | intergenic (‑93/+304) | asnB/nagD | asparagine synthetase B/UMP phosphatase |
? | REL606 | = 2930921 | 54 (0.970) | coding (734/744 nt) | ygfF | predicted NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain |
Only 100 of 179 total aligned reads displayed.
CCGCAAAGCAGCACTGTGCGCAAGCGATTTGGCGGTGAAAAAATAAAAAACGTAATGGTGATTGTCGAT > REL606/681331‑681399 | ccGCAAAGCAGCACTGTGTGCAAGCGATTTGGCGG < 1:1464039‑M1/35‑1 (MQ=255) ccGCAAAGCAGCACTGTGCGCAAGCGATTTGGCGG < 1:19833503‑M1/35‑1 (MQ=255) ccGCAAAGCAGCACTGTGCGCAAGCGATTTGGCGG > 1:2429203‑M1/1‑35 (MQ=255) ccGCAAAGCAGCACTGTGCGCAAGCGATTTGGCGG > 1:397497‑M1/1‑35 (MQ=255) cGCAAAGCAGCACTGTGCGCAAGCGATTTGGCGGt > 1:2133181/1‑35 (MQ=255) cGCAAAGCAGCACTGTGCGCAAGCGATTTGGCGGg > 1:793290‑M1/1‑34 (MQ=255) gCAAAGCAGCACTGTTCGCAAGCGATTTGGCGGgg > 1:15447351‑M1/1‑33 (MQ=255) gCAAAGCAGCACTGTGCGCAAGCGATTTGGCGGTg < 1:15787446/35‑1 (MQ=255) gCAAAGCAGCACTGTGCGCAAGCGATTTGGCGGTg < 1:4246286/35‑1 (MQ=255) cAAAGCAGCACTGTGCGCAAGCGATTTTGCGGTGa > 1:13055216/1‑35 (MQ=255) cAAAGCAGCACTGTGCGCAAGCGATTTGGCGGggg > 1:4156539‑M1/1‑32 (MQ=255) aaaGCAGCACTGTGCGCAAGCGATTTGGCGGgggg > 1:19401142‑M1/1‑31 (MQ=255) aaaGCAGCACTGTGCGCAAGCGATTTGGCGGggga > 1:7075133‑M1/1‑31 (MQ=255) aaaGCAGCACTGTGCGCAAGCGATTTGGCGGTGaa < 1:17518240/35‑1 (MQ=255) aaaGCAGCACTGTGCGCAAGCGATTTGGCGGTGaa < 1:3855332/35‑1 (MQ=255) aaaGCAGCACTGTGCGCAAGCGATTTGGCGGTGaa < 1:11059752/35‑1 (MQ=255) aaGCAGCACTGTGCGCAAGCGATTTGGCGGTGaaa < 1:4702744/35‑1 (MQ=255) agcagcACTGTGCGCAAGCGATTTGGCGGgggggg > 1:12989173‑M1/1‑29 (MQ=255) agcagcACTGTGCGCAAGCGATTTGGCGGggggga > 1:2608121‑M1/1‑29 (MQ=255) agcagcACTGTGCGCAAGCGATTTGGCGGggggga > 1:8372325‑M1/1‑29 (MQ=255) agcagcACTGTGCGCAAGCGATTTGGCGGTGaaaa < 1:3167344/35‑1 (MQ=255) gcagcaCTGTGCGCAAGCGATTTGGCGGTGaaaaa < 1:19975279/35‑1 (MQ=255) gcagcaCTGTGCGCAAGCGATTTGGCGGTGaaaaa < 1:7510096/35‑1 (MQ=255) gcagcaCTGTGCGCAAGCGATTTGGCGGTGaaaaa < 1:16988600/35‑1 (MQ=255) cagcaCTGTGCGCAGGCGATTTCGCGGTGaaaaaa > 1:10298682/1‑35 (MQ=37) cagcaCTGTGCGCAAGCGATTTGGCGGTGaaaaaa < 1:12074539/35‑1 (MQ=255) cagcaCTGTGCGCAAGCGATTTGGCGGTGaaaaaa < 1:18419654/35‑1 (MQ=255) cagcaCTGTGCGCAAGCGATTTGGCGGGGgaaaaa > 1:11045365/1‑35 (MQ=38) agcaCTGTGCGCAAGCGATTTGGCGGTGAAAAAAt < 1:19071296/35‑1 (MQ=255) agcaCTGTGCGCAAGCGATTTGGCGGTGAAAAAAt < 1:2979901/35‑1 (MQ=255) agcaCTGTGCGCAAGCGATTTGGCGGTGAAAAAAt < 1:3363378/35‑1 (MQ=255) caCTGTGCGCAAGCGATTTGGCGGTGAAAAAATaa < 1:7052929/35‑1 (MQ=255) caCTGTGCGCAAGCGATTTGGCGGTGAAAAAATaa < 1:6342933/35‑1 (MQ=255) caCTGTGCGCAAGCGATTTGGCGGTGAAAAAATaa < 1:8677650/35‑1 (MQ=255) aCTGTGCGCAAGCGATTTGGCGGTGAAAAAATaaa < 1:909509/35‑1 (MQ=255) aCTGTGCGCAAGCGATTTGGCGGTGAAAAAATaaa < 1:19257581/35‑1 (MQ=255) aCTGTGCGCAAGCGATTTGGCGGGGGGAAAAAaaa > 1:13763342/1‑35 (MQ=16) aCTGTGCGCAAGCGATTTGGCGGGGGGAAAAAaaa > 1:9792030/1‑35 (MQ=16) cTGTGCGCAAGCGATTTGGCGGTGAAAAAATaaaa < 1:5412072/35‑1 (MQ=255) cTGTGCGCAAGCGATTTGGCGGTGAAAAAATaaaa < 1:17082181/35‑1 (MQ=255) cTGTGCGCAAGCGATTTGGCGGGGGGAAAAAaaaa > 1:4744101/1‑35 (MQ=16) cTGTGCGCAAGCGATTTGGCGGGGGGAAAAAaaaa > 1:5528559/1‑35 (MQ=16) tgtgCGCAAGCGATTTGGCGGGGGAGAAAAaaaaa > 1:18643611/1‑35 (MQ=16) gtgCGCAAGCGATTTGGCGGTGAAAAAATaaaaaa < 1:10822458/35‑1 (MQ=255) gtgCGCAAGCGATTTGGCGGTGAAAAAATaaaaaa < 1:15042816/35‑1 (MQ=255) gtgCGCAAGCGATTTGGCGGGGGGGAAAAaaaaaa > 1:8038743/1‑35 (MQ=2) gtgCGCAAGCGATTTGGCGGGGGGAAAAAaaaaaa > 1:5406855/1‑35 (MQ=16) gtgCGCAAGCGATTTGGCGGGGGGAAAAAaaaaaa > 1:2366458/1‑35 (MQ=16) gcAAGCGATTTGGCGGTGGAAAAATAAAAAACGTa < 1:19385547/35‑1 (MQ=255) gcAAGCGATTTGGCGGTGAAAAAATAAAAAACGTa < 1:13403087/35‑1 (MQ=255) gcAAGCGATTTGGCGGTGAAAAAATAAAAAACGTa < 1:3170817/35‑1 (MQ=255) gcAAGCGATTTGGCGGTGAAAAAATAAAAAACGTa < 1:20415235/35‑1 (MQ=255) cAAGCGATTTGGCGGTGAAAAAATAAAAAACGTaa < 1:5840263/35‑1 (MQ=255) cAAGCGATTTGGCGGTGAAAAAATAAAAAACGTaa < 1:9561127/35‑1 (MQ=255) aaGCGATTTGGCGGTGAAAAAATAAAAAACGTAAt < 1:18198238/35‑1 (MQ=255) cGATTTGGCGGgcgggaaataaaacagggaagttg > 1:10054934‑M1/1‑11 (MQ=255) cGATTTGGCGGgcgggaaataaaacagggaagttg < 1:7627808‑M1/35‑25 (MQ=255) cGATTTGGCGGgcgggaaataaaacagggaagttg < 1:12310670‑M1/35‑25 (MQ=255) cGATTTGGCGGgcgggaaataaaacagggaagttg < 1:6492384‑M1/35‑25 (MQ=255) cGATTTGGCGGgcgggaaataaaacagggaagttg < 1:17870136‑M1/35‑25 (MQ=255) cGATTTGGCGGTGAAAAAATAAAAAACGTAATGGt < 1:4873001/35‑1 (MQ=255) gATTTGGCGGgcgggaaataaaacagggaagttgt < 1:6302926‑M1/35‑26 (MQ=255) gATTTGGCGGTGAAAAAATAAAAAACGTAATGGTg < 1:18444610/35‑1 (MQ=255) gATTTGGCGGTGAAAAAATAAAAAACGTAATGGTg < 1:16274411/35‑1 (MQ=255) aTTTGGCGGgcgggaaataaaacagggaagttgtc > 1:15953545‑M1/1‑9 (MQ=255) aTTTGGCGGgcgggaaataaaacagggaagttgtc < 1:9029545‑M1/35‑27 (MQ=255) aTTTGGCGGgcgggaaataaaacagggaagttgtc > 1:3099795‑M1/1‑9 (MQ=255) aTTTGGCGGgcgggaaataaaacagggaagttgtc > 1:10129608‑M1/1‑9 (MQ=255) tttGGCGGgcgggaaataaaacagggaagttgtct < 1:11726503‑M1/35‑28 (MQ=255) ttGGCGGgcgggaaataaaacagggaagttgtctg < 1:19649537‑M1/35‑29 (MQ=255) ttGGCGGTGAAAAAATAAAAAACGTAATGGTGAtt < 1:7702442/35‑1 (MQ=255) ttGGCGGTGAAAAAATAAAAAACGTAATGGTGAtt < 1:17474986/35‑1 (MQ=255) tGGCGGTGAAAAAATAAAAAACGTAATGGTGATTg < 1:9841325/35‑1 (MQ=255) tGGCGGTGAAAAAATAAAAAACGTAATGGTGATTg < 1:8208993/35‑1 (MQ=255) ggcgggcgggaaataaaacagggaagttgtctgac < 1:899658‑M1/35‑31 (MQ=255) ggcgggcgggaaataaaacagggaagttgtctgac > 1:17253847‑M1/1‑5 (MQ=255) ggcgggcgggaaataaaacagggaagttgtctgac > 1:18296313‑M1/1‑5 (MQ=255) ggCGGTGAAAAAATAAAAAACGTAATGGTGATTGt < 1:13188213/35‑1 (MQ=255) ggCGGTGAAAAAATAAAAAACGTAATGGTGATTGt < 1:8835481/35‑1 (MQ=255) ggCGGTGAAAAAATAAAAAACGTAATGGTGATTGt < 1:8776549/35‑1 (MQ=255) gcgggcgggaaataaaacagggaagttgtctgacc < 1:14013510‑M1/35‑32 (MQ=255) gcgggcgggaaataaaacagggaagttgtctgaac > 1:3327609‑M1/1‑4 (MQ=255) gCGGTGAAAAAATAAAAAACGTAATGGTGATTGTc < 1:14543864/35‑1 (MQ=255) gCGGTGAAAAAATAAAAAACGTAATGGTGATTGTc < 1:4973952/35‑1 (MQ=255) gCGGTGAAAAAATAAAAAACGTAATGGTGATTGTc > 1:6143519/1‑35 (MQ=255) gCGGTGAAAAAATAAAAAACGTAATGGTGATTGTc < 1:6795962/35‑1 (MQ=255) cGGTGAAAAAATAAAAAACGTAATGGTGATTGTCg > 1:2027347/1‑35 (MQ=255) cGGTGAAAAAATAAAAAACGTAATGGTGATTGTCg < 1:13548753/35‑1 (MQ=255) gggcgggaaataaaacagggaagttgtctgacctg > 1:19077827‑M1/1‑2 (MQ=255) gggcgggaaataaaacagggaagttgtctgaccgg > 1:4516417‑M1/1‑2 (MQ=255) gggcgggaaataaaacagggaagttgtctgaccgg < 1:14989496‑M1/35‑34 (MQ=255) ggTGAAAAAATAAAAAACGTAATGGTGATTGTCGa < 1:3664065/35‑1 (MQ=255) ggTGAAAAAATAAAAAACGTAATGGTGATTGTCGa < 1:2544854/35‑1 (MQ=255) ggTGAAAAAATAAAAAACGTAATGGTGATTGTCGa < 1:19297038/35‑1 (MQ=255) ggcgggaaataaaacagggaagttgtctgaccgga < 1:8743240‑M1/35‑35 (MQ=255) ggcgggaaataaaacagggaagttgtctgaccgga > 1:1649291‑M1/1‑1 (MQ=255) ggcgggaaataaaacagggaagttgtctgaccgga > 1:14284502‑M1/1‑1 (MQ=255) ggcgggaaataaaacagggaagttgtctgaccgga > 1:2162205‑M1/1‑1 (MQ=255) gTGAAAAAATAAAAAACGTAATGGTGATTGTCGAt > 1:9108404/1‑35 (MQ=255) gTGAAAAAATAAAAAACGTAATGGTGATTGTCGAt < 1:17248875/35‑1 (MQ=255) | CCGCAAAGCAGCACTGTGCGCAAGCGATTTGGCGGTGAAAAAATAAAAAACGTAATGGTGATTGTCGAT > REL606/681331‑681399 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |