New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 201988385 (0.830)18 (0.210) 5/40 NT 23.7% intergenic (‑312/‑115) yeeZ/hisL predicted epimerase, with NAD(P)‑binding Rossmann‑fold domain/his operon leader peptide
?REL606 = 3163334 45 (0.530)coding (1630/2352 nt) ygjK predicted glycosyl hydrolase

TTCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2019846‑2019883
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcCATTAGCGACATATTTATCCAACTGTTCTTTGTC  <  REL606/3163334‑3163301
                                                                        
TTCTAATGTAGTCACTCCAGGCCCCCTCCTTTCCC                                       <  1:22155/35‑1
TTCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCC                                       >  1:10656635/1‑35
TTCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCC                                       <  1:8911490/35‑1
 TCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCC                                      <  1:9598050/35‑1
 TCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCC                                      >  1:6145436/1‑35
 TCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCC                                      >  1:4841870/1‑35
 TCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCC                                      >  1:18805003/1‑35
 TCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCC                                      <  1:12247593/35‑1
  CTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCG                                     >  1:3058704/1‑35
  CTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCG                                     >  1:10787561/1‑35
  CTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCG                                     <  1:2585075/35‑1
  CTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCG                                     >  1:19782652/1‑35
  CTAACGTAGTCACTCCAGGCCCCCTACTTTCCCCG                                     <  1:18189098/35‑1
   TAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCGC                                    <  1:16037514/35‑1
                     tCCCCTCCTTTCCCCGCCATTAGCGACATATTTAT                  <  1:18046928/34‑1
                     gtCCCTCCTTTCCCCGCCATTAGCGACATATTTAT                  <  1:7441400/33‑1
                     CCCCCTCCTTTCCCCGCCATTAGCGACATATTTAT                  <  1:5701223/35‑1
                       CCCTCCTTTCCCCGCCATTAGCGACATATTTATCC                <  1:6876927/35‑1
                        CCTTCTTTCCCCGCCATTAGCGACATATTTATCCA               <  1:6544524/35‑1
                         cttCTTTCCCCGCCATTAGCGACATATTTATCCAA              <  1:14248138/32‑1
                         cttCTTTCCCCGCCATTAGCGACATATTTATCCAA              <  1:11308081/32‑1
                           tCTTGCCCCGCCATTAGCGACATATTTATCCAACT            <  1:14466506/34‑1
                           gtTTTCCCCGCCATTAGCGACATATTTATCCAACT            <  1:10523507/33‑1
                           gCTTCCCCCGCCATTAGCGACATATTTATCCAACT            <  1:15594047/34‑1
                           ccgTTCCCCGCCATTAGCGACATATTTATCCAACT            <  1:6474337/32‑1
                           aCTTTCGCCGCCATTAGCGACATATTTATCCAACT            <  1:17014382/34‑1
                           CCTTTCCCCGCCATTAGCGACATATTTATCCAACT            <  1:896361/35‑1
                           CCTTTCCCCGCCATTAGCGACATATTTATCCAACT            <  1:3179300/35‑1
                           CCTTTCCCCGCCATTAGCGACATATTTATCCAACT            <  1:3990170/35‑1
                           CCTTCCCCCGCCATTAGCGACATATTTATCCAACT            <  1:13006010/35‑1
                            CTTTCCCCGCCATTAGCGACATATTTATCCAACTG           <  1:6179572/35‑1
                            CTTTCCCCGCCATTAGCGACATATTTATCCAACTG           <  1:7076052/35‑1
                            CTTTCCCCGCCATTAGCGACATATTTATACAACTG           <  1:6898178/35‑1
                            CTTCCCCCGCCATTAGCGACATATTTATCCAACTG           <  1:18648044/35‑1
                             ttcCCCCGCCATTAGCGACATATTTATCCAACTGT          <  1:17638859/32‑1
                             ttcCCCCGCCATTAGCGACATATTTATCCAACTGT          <  1:1086139/32‑1
                             ttcCCCCGCCATTAGCGACATATTTATCCAACTGT          <  1:4611032/32‑1
                             ttcCCCCGCCATTAGCGACATATTTATCCAACTGT          <  1:20292850/32‑1
                             tccCCCCGCCATTAGCGACATATTTATCCAACTGT          <  1:4381117/32‑1
                             gTTCCCCGCCATTAGCGACATATTTATCAAACTGT          <  1:5647528/34‑1
                             TTTCCCCGCCATTAGCGACATATTTATCCAACTGT          <  1:13176827/35‑1
                             TTTCCCCGCCATTAGCGACATATTTATCCAACTGT          <  1:9447217/35‑1
                             TTTCCCCGCCATTAGCGACATATTTATCCAACTGT          <  1:16662287/35‑1
                             TTTCCCCGCCATTAGCGACATATTTATCCAACTGT          <  1:5680895/35‑1
                              tcCCCCGCCATTAGCGACATATTTATCCAACTGTT         <  1:14738577/33‑1
                              TTCCCCGCCATTAGCTACATATTTATCCAACTGTT         <  1:2424445/35‑1
                              TTCCCCGCCATTAGCGACATATTTATCCAACTGTT         <  1:1561599/35‑1
                              TTCCCCGCCATTAGCGACATATTTATCCAACTGTT         <  1:13746485/35‑1
                               ctCCCGCCATTAGCGACATATTTATCCAACTGTTC        <  1:18066340/33‑1
                               TCCCCGCCATTAGCGACATATTTATCCAACTGTTC        <  1:14108780/35‑1
                               TCCCCGCCATTAGCGACATATTTATCCAACTGTTC        <  1:7197033/35‑1
                                CCCCGCCATTAGCGACATATTTATCCAACTGTTCT       <  1:2351382/35‑1
                                CCCCGCCATTAGCGACATATTTATCCAACTGTTCT       <  1:20608701/35‑1
                                CCCCGCCATTAGCGACATATTTATCCAACTGTTCT       <  1:4098559/35‑1
                                CCCCGCCATTAGCGACATATTTATCCAACTGTTCT       <  1:18091760/35‑1
                                CCCCGCCATTAGCGACATATTTATCCAACTGTTCT       <  1:15809753/35‑1
                                 CCCGCCATTAGCGACATATTTATCCAACTGTTCTT      <  1:10580929/35‑1
                                 CCCGCCATTAGCGACATATTTATCCAACTGTTCTT      <  1:14275984/35‑1
                                 CCCGCCATTAGCGACATATTTATCCAACTGTTCTT      <  1:13721635/35‑1
                                  CCGCCATTATCGACATATTTATCCAACTGTTCTTT     >  1:2717987/1‑35
                                  CCGCCATTAGCGACATATTTATCCAACTGTTCTTT     >  1:5845234/1‑35
                                  CCGCCATTAGCGACATATTTATCCAACTGTTCTTT     >  1:8493560/1‑35
                                  CCGCCATTAGCGACATATTTATCCAACTGTTCTTT     <  1:8176902/35‑1
                                  CCGCCATTAGCGACATATTTATCCAACTGTTCTTT     <  1:7630674/35‑1
                                  CCGCCATTAGCGACATATTTATCCAACTGTTCTTT     <  1:17932154/35‑1
                                  CCGCCATTAGCGACATATTTATCCAACTGTTCTTT     <  1:11261844/35‑1
                                  CCGCCATTAGCGACATATTTATCCAACTGTTCTTT     <  1:9316605/35‑1
                                   CGCCATTAGCGACATATTTATCCAACTGTTCTTTG    <  1:10419128/35‑1
                                   CGCCATTAGCGACATATTTATCCAACTGTTCTTTG    >  1:10522470/1‑35
                                   CGCCATTAGCGACATATTTATCCAACTGTTCTTTG    <  1:17006813/35‑1
                                   CGCCATTAGCGACATATTTATCCAACTGTTCTTTG    <  1:18125586/35‑1
                                   CGCCATTAGCGACATATTTATCCAACTGTTCTTTG    <  1:20371265/35‑1
                                   CGCCATTAGCGACATATTTATCCAACTGTTCTTTG    <  1:6052453/35‑1
                                    GCCATTAGCGACATATTTATCCAACTGTTCTTTGT   <  1:1985639/35‑1
                                    GCCATTAGCGACATATTTATCCAACTGTTCTTTGT   >  1:17799449/1‑35
                                    GCCATTAGCGACATATTTATCCAACTGTTCTTTGT   <  1:5413815/35‑1
                                     CCATTAGCGACATATTTATCCAACTGTTCTTTGTC  <  1:3567154/35‑1
                                     CCATTAGCGACATATTTATCCAACTGTTCTTTGTC  <  1:19414082/35‑1
                                     CCATTAGCGACATATTTATCCAACTGTTCTTTGTC  >  1:1908858/1‑35
                                     CCATTAGCGACATATTTATCCAACTGTTCTTTGTC  <  1:7253454/35‑1
                                     CCATTAGCGACATATTTATCCAACTGTTCTTTGTC  <  1:4415774/35‑1
                                     CCATTAGCGACATATTTATCCAACTGTTCTTTGTC  <  1:17610270/35‑1
                                     CCATTAGCGACATATTTATCCAACTGTTCTTTGTC  <  1:17461153/35‑1
                                     CCATTAGCGACATATTTATCCAACTGTTCTTTGTC  <  1:4440837/35‑1
                                     CCATTAGCGACATATTTATCCAACTGTTCTTTGTC  <  1:16753407/35‑1
                                     CCATTAGCGACATATTTATCCAACTGTTCTTTGTC  <  1:10983041/35‑1
                                                                        
TTCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2019846‑2019883
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcCATTAGCGACATATTTATCCAACTGTTCTTTGTC  <  REL606/3163334‑3163301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.