New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1661078 = | 57 (0.550) | 10 (0.120) | 4/40 | NT | 15.8% | coding (1002/1302 nt) | rstB | sensory histidine kinase in two‑component regulatory system with RstA |
? | REL606 | = 3625456 | 59 (0.690) | pseudogene (7/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
Only 100 of 108 total aligned reads displayed.
TGCTGGATAATTTGCTCAATAACGCCCTGCGCTACTGCCATTCAACGGTTGAAACCAGCCTGCTACTGT > REL606/1661044‑1661112 | tGCTGGATAATTTGCTCAATAACGCCCTGCGCTAc > 1:14320641/1‑35 (MQ=255) tGCTGGATAATTTGCTCAATAACGCCCTGCGCTAc < 1:1135382/35‑1 (MQ=255) gCTGGATAATTTGCTCAATAACGCCCTGCGCTACt < 1:12989628/35‑1 (MQ=255) gCTGGATAATTTGCTCAATAACGCCCTGCGCTACt < 1:12464825/35‑1 (MQ=255) gCTGGATAATTTGCTCAATAACGCCCTGCGCTACt < 1:18545461/35‑1 (MQ=255) gCTGGATAATTTGCTCAATAACGCCCTGCGCTACt < 1:9594901/35‑1 (MQ=255) gCTGGATAATTTGCTCAATAACGCCCTGCGCTACt > 1:436335/1‑35 (MQ=255) gCTGGATAATTTGCTCAATAACGCCCTGCGCTACt > 1:10265923/1‑35 (MQ=255) cTGGATAATTTGCTCAATAACGCCCTGCGCTACTg > 1:19249408/1‑35 (MQ=255) cTGGATAATTTGCTCAATAACGCCCTGCGCTACTg < 1:14841336/35‑1 (MQ=255) cTGGATAATTTGCTCAATAACGCCCTGCGCTACTg > 1:7963271/1‑35 (MQ=255) tGGATAATTTGCTCTATAACGCCCTGCGCTACTGc > 1:1003955/1‑35 (MQ=255) tGGATAATTTGCTCAATAACGCCCTGCGCTACTGc < 1:2738975/35‑1 (MQ=255) tGGATAATTTGCTCAATAACGCCCTGCGCTACTGc > 1:5098719/1‑35 (MQ=255) tGGATAATTTGCTCAATAACGCCCTGCGCTACTGc > 1:10952459/1‑35 (MQ=255) gATAATTTGCTCAATAACGCCCTGCGCTACTGCCa > 1:764450/1‑35 (MQ=255) gATAATTTGCTCAATAACGCCCTGCGCTACTGCCa > 1:13034958/1‑35 (MQ=255) gATAATTTGCTCAATAACGCCCTGCGCTACTGCCa > 1:367585/1‑35 (MQ=255) gATAATTTGCTCAATAACGCCCTGCGCTACTGCCa > 1:4520647/1‑35 (MQ=255) aTAATTTGCTCAATAACGCCCTGCGCTACTGCCAt > 1:11436438/1‑35 (MQ=255) aTAATTTGCTCAATAACGCCCTGCGCTACTGCCAt > 1:2644117/1‑35 (MQ=255) aTAATTTGCTCAATAACGCCCTGCGCTACTGCCAt > 1:7486025/1‑35 (MQ=255) aaTTTGCTCAATAACGCCCTGCGCTACTGCCATTc > 1:18656530/1‑35 (MQ=255) aaTTTGCTCAATAACGCCCTGCGCTACTGCCATTc > 1:5707189/1‑35 (MQ=255) aaTTTGCTCAATAACGCCCTGCGCTACTGCCATTc > 1:17693416/1‑35 (MQ=255) aaTTTGCTCAATAACGCCCTGCGCTACTGCCATTc > 1:19161207/1‑35 (MQ=255) aaTTTGCTCAATAACGCCCTGCGCTACTGCCATTc > 1:9219973/1‑35 (MQ=255) aaTTTGCTCAATAACGCCCTGCGCTACTGCCATTc > 1:11951015/1‑35 (MQ=255) tttGCTCAATAACGCCCTGCGCTACTGCCATTCaa > 1:16753790/1‑35 (MQ=255) ttGCTCAATAACGCCCTGCGCTACTGCCATTCAAc > 1:4338143/1‑35 (MQ=255) tGCTCAATAACGCCCTGCGCTACTGCCATTCAACg > 1:14108262/1‑35 (MQ=255) gCTCAATAACGCCCTGCGCTACTGCCATTCAACgg > 1:19100188/1‑35 (MQ=255) gCTCAATAACGCCCTGCGCTACTGCCATTCAACgg > 1:1291912/1‑35 (MQ=255) gCTCAATAACGCCCTGCGCTACTGCCATTCAACgg > 1:12664554/1‑35 (MQ=255) gCTCAATAACGCCCTGCGCTACTGCCATTCAACgg > 1:11733230/1‑35 (MQ=255) cTCAATAACGCCCTGCGCTACTGCCATTCAACGGt > 1:326790/1‑35 (MQ=255) cTCAATAACGCCCTGCGCTACTGCCATTCAACGGt > 1:9611675/1‑35 (MQ=255) cTCAATAACGCCCTGCGCTACTGCCATTCAACGGt > 1:18057045/1‑35 (MQ=255) cAATAACGCCCTGCGCTACTGCCATTCAACGGTTg > 1:13289450/1‑35 (MQ=255) aaTAACGCCCTGCGCTACTGCCATTCAACGGTTGa > 1:14547220/1‑35 (MQ=255) aaTAACGCCCTGCGCTACTGCCATTCAACGGTTGa > 1:11022321/1‑35 (MQ=255) aaTAACGCCCTGCGCTACTGCCATTCAACGGTTGa > 1:17679005/1‑35 (MQ=255) aTAACGCCCTGCGCTACTGCCATTCAACGGTTGaa > 1:1136791/1‑35 (MQ=255) tAACGCCCTGCGCTACTGCCATTCAACGGTTGaaa > 1:4657639/1‑35 (MQ=255) tAACGCCCTGCGCTACTGCCATTCAACGGTTGaaa > 1:4588626/1‑35 (MQ=255) tAACGCCCTGCGCTACTGCCATTCAACGGTTGaaa > 1:10010181/1‑35 (MQ=255) accGCCCTCCCCTCCTGCCATTCAACGGTTGAAAc < 1:2612997/33‑1 (MQ=21) aaCGCCCTGCGCTACTGCCATTCAACTGTTGAAAc > 1:914087/1‑35 (MQ=255) aaCGCCCTGCGCTACTGCCATTCAACGGTTGAAAc > 1:15996319/1‑35 (MQ=255) aaCGCCCTGCGCTACTGCCATTCAACGGTTGAAAc > 1:107343/1‑35 (MQ=255) aaCGCCCTGCGCTACTGCCATTCAACGGTTGAAAc > 1:9453913/1‑35 (MQ=255) ccccccTGCCCTCCTGCCATTCAACGGTTGAAAcc < 1:8049822/32‑1 (MQ=25) aCGCCCTGCGCTACTGCCATTCAACGGTTGAAAcc > 1:14010533/1‑35 (MQ=255) cccccgccccccCTGCCATTCAACGGTTGAAACCa > 1:3913297‑M1/13‑35 (MQ=255) ccccccccccccCTGCCATTCAACGGTTGAAACCa > 1:9685832‑M1/13‑35 (MQ=255) cccccTGCCCCCCTGCCATTCAACGGTTGAAACCa < 1:12940766/33‑1 (MQ=25) cGCCCTGCGCTACTGCCATTCAACGGTTGAAACCa > 1:2860878/1‑35 (MQ=255) cGCCCTGCGCTACTGCCATTCAACGGTTGAAACCa > 1:4447138/1‑35 (MQ=255) cGCCCTGCGCCCCTGCCATTCAACGGTTGAAACCa < 1:18141989/35‑1 (MQ=37) gCCCTGCGCTACTGCCATTCAACGGTTGAAACCaa > 1:14083190/1‑34 (MQ=255) gCCCTGCGCTACTGCCATTCAACGGTTGAAACCAg > 1:2686178/1‑35 (MQ=255) gCCCTGCGCTACTGCCATTCAACGGTTGAAACCAg > 1:14500309/1‑35 (MQ=255) ccccgccccccCTGCCATTCAACGGTTGAAACCAg > 1:13467863‑M1/12‑35 (MQ=255) ccccTGCGCTCCTGCCATTCAACGGTTGAAACCAg < 1:10474309/34‑1 (MQ=255) ccccGGCGCCCCTGCCATTCAACGGTTGAAACCAg < 1:14539235/34‑1 (MQ=25) cccgccccccCTGCCATTCAACGGTTGAAACCAGc > 1:6484225‑M1/11‑35 (MQ=255) ccccccccccCTGCCATTCAACGGTTGAAACCAGc > 1:14419950‑M1/11‑35 (MQ=255) ccgccgcccCTGCCATTCAACGGTTGAAACCAGcc > 1:5701936‑M1/10‑35 (MQ=255) ccTGCGCTACTGCCATTCAACGGTTGAAACCAGcc > 1:1889388/1‑35 (MQ=255) ctgcccccCTGCCATTCAACGGTTGAAACCAGCCt > 1:7980870‑M1/9‑35 (MQ=255) cgcccctcCTGCCATTCAACGGTTGAAACCAGCCt > 1:18222591‑M1/9‑35 (MQ=255) cgcccctcCTGCCATTCAACGGTTGAAACCAGCCt > 1:16017432‑M1/9‑35 (MQ=255) cTGCGCTACTGCCATTCAACGGTTGAAACCAGCCt > 1:2570053/1‑35 (MQ=255) cTGCGCTACTGCCATTCAACGGTTGAAACCAGCCt > 1:18944514/1‑35 (MQ=255) cTGCGCTACTGCCATTCAACGGTTGAAACCAGCCt > 1:9381064/1‑35 (MQ=255) tgcccccCTGCCATTCAACGGTTGAAACCAGCCTg > 1:10844572‑M1/8‑35 (MQ=255) tGCGCTACTGCCATTCAACGGTTGAAACCAGCCTg > 1:9696692/1‑35 (MQ=255) tGCGCTACTGCCATTCAACGGTTGAAACCAGCCTg > 1:8151546/1‑35 (MQ=255) tGCGCTACTGCCATTCAACGGTTGAAACCAGCCTg > 1:7868767/1‑35 (MQ=255) cccccccCTGCCATTCAACGGTTGAAACCAGCCTg > 1:15180992‑M1/8‑35 (MQ=255) gcgcTACTGCCATTCAACGGTTGAAACCAGCCTGc > 1:16461397/1‑35 (MQ=255) gcTACTGCCATTCAACGGTTGAAACCAGCCTGCTa > 1:10243398/1‑35 (MQ=255) gcTACTGCCATTCAACGGTTGAAACCAGCCTGCTa > 1:7501973/1‑35 (MQ=255) gcTACTGCCATTCAACGGTTGAAACCAGCCTGCTa > 1:9272916/1‑35 (MQ=255) ccccCTGCCATTCAACGGTTGAAACCAGCCTGCTa > 1:15460511‑M1/5‑35 (MQ=255) ccccCTGCCATTCAACGGTTGAAACCAGCCTGCTa > 1:8604599‑M1/5‑35 (MQ=255) cccCTGCCATTCAACGGTTGAAACCAGCCTGCTAc > 1:19127598‑M1/4‑35 (MQ=255) tACTGCCATTCAACGGTTGAAACCAGCCTGCTACt > 1:10279413/1‑35 (MQ=255) tACTGCCATTCAACGGTTGAAACCAGCCTGCTACt > 1:13217659/1‑35 (MQ=255) tACTGCCATTCAACGGTTGAAACCAGCCTGCTACt > 1:4944484/1‑35 (MQ=255) tACTGCCATTCAACGGTTGAAACCAGCCTGCTACt > 1:17544009/1‑35 (MQ=255) tACTGCCATTCAACGGTTGAAACCAGCCTGCTACt > 1:7444213/1‑35 (MQ=255) ccCTGCCATTCAACGGTTGAAACCAGCCTGCTACt > 1:18087011‑M1/3‑35 (MQ=255) cCTGCCATTCAACGGTTGAAACCAGCCTGCTACTg > 1:1300595‑M1/2‑35 (MQ=255) cCTGCCATTCAACGGTTGAAACCAGCCTGCTACTg > 1:20428485‑M1/2‑35 (MQ=255) cCTGCCATTCAACGGTTGAAACCAGCCTGCTACTg > 1:971121‑M1/2‑35 (MQ=255) cCTGCCATTCAACGGTTGAAACAAGCCTGCTACTg > 1:5768226‑M1/2‑35 (MQ=255) aCTGCCATTCAACGGTTGAAACCAGCCTGCTACTg > 1:18407512/1‑35 (MQ=255) aCTGCCATTCAACGGTTGAAACCAGCCTGCTACTg > 1:4744893/1‑35 (MQ=255) CTGCCATTCAACGGTTGAAACCAGCCTGCTACTGt < 1:7832799‑M1/35‑1 (MQ=255) | TGCTGGATAATTTGCTCAATAACGCCCTGCGCTACTGCCATTCAACGGTTGAAACCAGCCTGCTACTGT > REL606/1661044‑1661112 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |