New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3545201 | 81 (0.790) | 9 (0.120) | 3/36 | NT | 13.7% | coding (847/1575 nt) | nikA | nickel transporter subunit |
? | REL606 | = 4576439 | 53 (0.690) | coding (2/381 nt) | hpaF | 5‑carboxymethyl‑2‑hydroxymuconate delta‑isomerase |
Only 100 of 135 total aligned reads displayed.
AATATTTTCAGTACATTCCACGATAAAGTGCGGCATGGTGGTTCCTTACGCGGGCAGCGGGAAAACAGC > REL606/4576405‑4576473 | aaTATTTTCAGTACATTCCACGATAAAGTGCGGCa > 1:13457448/1‑35 (MQ=255) aaTATTTTCAGTACATTCCACGATAAAGTGCGGCa > 1:8585751/1‑35 (MQ=255) aaTATTTTCAGTACATTCCACGATAAAGTGCGGCa < 1:12530556/35‑1 (MQ=255) aaTATTTTCAGTACATTCCACGATAAAGTGCGGCa > 1:20416787/1‑35 (MQ=255) atatTTTCAGTACATTCCACGATAAAGTGCGGCAt < 1:15967651‑M2/35‑2 (MQ=255) atatTTTCAGTACATTCCACGATAAAGTGCGGCAt < 1:11443485‑M2/35‑2 (MQ=255) tatTTTCAGTACATTCCACGATAAAGTGCGGCAtg < 1:15690075‑M2/35‑3 (MQ=255) tatTTTCAGTACATTCCACGATAAAGTGCGGCAtg > 1:3620269‑M2/1‑33 (MQ=255) tatTTTCAGTACATGCCACGATAAAGTGCGGCAtg > 1:14283988‑M2/1‑33 (MQ=255) atTTTCAGTACATTCCACGATAAAGTGCGGCAtgg < 1:18732614‑M2/35‑4 (MQ=255) atTTTCAGTACATTCCACGATAAAGTGCGGCAtgg < 1:4991504‑M2/35‑4 (MQ=255) atTTTCAGTACATTCCACGATAAAGTGCGGCAtgg > 1:10694644‑M2/1‑32 (MQ=255) atTTTCAGTACATTCCACGATAAAGTGCGGCAtgg > 1:1336618‑M2/1‑32 (MQ=255) ttttCAGTACATTCCACGATAAAGTGCGGCAtggt < 1:11345073‑M2/35‑5 (MQ=255) ttttCAGTACATTCCACGATAAAGTGCGGCAtggt > 1:19889601‑M2/1‑31 (MQ=255) ttttCAGTACATTCCACGATAAAGTGCGGCAtggt > 1:17025022‑M2/1‑31 (MQ=255) ttttCAGTACATTCCACGATAAAGTGCGGCAtggt < 1:7962095‑M2/35‑5 (MQ=255) ttttCAGTACATTCCACGATAAAGTGCGGCAtggt > 1:15583880‑M2/1‑31 (MQ=255) ttttCAGTACATTCCACGATAAAGTGCGGCAtggt > 1:1365787‑M2/1‑31 (MQ=255) ttttCAGTACATTCCACGATAAAGTGCGGCAtggt > 1:9098347‑M2/1‑31 (MQ=255) tttCAGTACATTCCACGATAAAGTGCGGCAtggtg < 1:3882798‑M2/35‑6 (MQ=255) tttCAGTACATTCCACGATAAAGTGCGGCAtggtg > 1:3438335‑M2/1‑30 (MQ=255) tttCAGTACATTCCACGATAAAGTGCGGCAtggtg < 1:2272536‑M2/35‑6 (MQ=255) tttCAGTACATTCCACGATAAAGTGCGGCAtggtg < 1:1896025‑M2/35‑6 (MQ=255) tttCAGTACATTCCACGATAAAGTGCGGCAtggtg < 1:9002565‑M2/35‑6 (MQ=255) tttCAGTACATTCCACGATAAAGTGCGGCAtggtg < 1:11731382‑M2/35‑6 (MQ=255) tttCAGTACATTCCACGATAAAGTGCGGCAtggtg > 1:10130808‑M2/1‑30 (MQ=255) tttAAGTACATTCCACGATAAAGTGCGGCAtggtg > 1:1615572‑M2/1‑30 (MQ=255) ttCAGTACATTCCACGATAAAGTGCGGCAtggtgg > 1:12818447‑M2/1‑29 (MQ=255) ttCAGTACATTCCACGATAAAGTGCGGCAtggtgg > 1:4676236‑M2/1‑29 (MQ=255) ttCAGTACATTCCACGATAAAGTGCGGCAtggtgg < 1:9752776‑M2/35‑7 (MQ=255) ttCAGTACATTCCACGATAAAGTGCGGCAtggtgg < 1:13715684‑M2/35‑7 (MQ=255) tCAGTACATTCCACGATAAAGTGCGGCAtggtggg < 1:14883858‑M2/35‑8 (MQ=255) cAGTACATTCCACGATAAAGTGCTGCATGGTGGtt > 1:1854833/1‑35 (MQ=255) cAGTACATTCCACGATAAAGTGCGGCATGGTGGtt < 1:15017677/35‑1 (MQ=255) aGTACATTCCACTATAAAGTGCGGCATAGTGGTTc > 1:10566862/1‑35 (MQ=38) aGTACATTCCACGATAAAGTGCGGCAtggtggggg < 1:1987610‑M2/35‑10 (MQ=255) aGTACATTCCACGATAAAGTGCGGCATGGTGGTTc < 1:11933968/35‑1 (MQ=255) gTACATTCCACGATAAAGTGCGGCATGGTGGTTcc < 1:20533777/35‑1 (MQ=255) tACATTCCACGATAAAGTGCGGCAtggtgggggct < 1:10449628‑M2/35‑12 (MQ=255) tACATTCCACGATAAAGTGCGGCAtggtgggggct < 1:4285340‑M2/35‑12 (MQ=255) tACATTCCACGATAAAGTGCGGCATGGTGGTTCCt < 1:7680639/35‑1 (MQ=255) tACATTCCACGATAAAGTGCGGCATGGTGGTTCCt < 1:7220375/35‑1 (MQ=255) tACATTCCACGATAAAGTGCGGCATGGTGGTTCCt < 1:16708813/35‑1 (MQ=255) tACATTCCACGATAAAGTGCGGCACGGTGGGTcgc > 1:9967619/1‑33 (MQ=25) aCATTCCACGATAAAGTGCGGCAtggtgggggctt < 1:8621291‑M2/35‑13 (MQ=255) aCATTCCACGATAAAGTGCGGCATGGTGGTTCCtt < 1:7691216/35‑1 (MQ=255) aCATTCAACGATAAAGTGCGGCATGGTGGTTCCtt < 1:17559262/35‑1 (MQ=255) cATTCCACGATAAAGTGCGGCAtggtgggggcttt < 1:3328647‑M2/35‑14 (MQ=255) cATTCCACGATAAAGTGCGGCATGGTGGTTCCTTa < 1:18033759/35‑1 (MQ=255) cATTACACGATAAAGTGCGGCATGGTGGTTCCTTa < 1:2294056/35‑1 (MQ=255) aTTCCACGATAAAGTGCGGCAtggtggggggtttc < 1:3895577‑M2/35‑15 (MQ=255) aTTCCACGATAAAGTGCGGCAtggtgggggctttc < 1:9051795‑M2/35‑15 (MQ=255) aTTCCACGATAAAGTGCGGCATGGTGGTTCCTTAc < 1:4629679/35‑1 (MQ=255) aTTCCACGATAAAGTGCGGCATGGTGGTTCCTTAc < 1:20125631/35‑1 (MQ=255) aTTCCACGATAAAGTGCGGCATGGTGGTTCCTTAc < 1:11608071/35‑1 (MQ=255) aTTCCACGATAAAGTGCGGCATGGTGGTTACTTAc < 1:6018063/35‑1 (MQ=255) aTTCCACGATAAAGTGCGGCATGGTGGGTGCttcc > 1:6635233/1‑33 (MQ=25) ttCCACGATAAAGTGCGGCATGGTGGTTCCTTAcg < 1:18588604/35‑1 (MQ=255) ttCCACGATAAAGTGCGGCATGGTGGTTCCTTAcg < 1:12522068/35‑1 (MQ=255) ttCCACGATAAAGTGCGGCATGGTGGGTGCtttag > 1:3715155/1‑32 (MQ=21) ttCCACGATAAAGTGCGGCATGGTGGGGCCtttag > 1:4940230/1‑32 (MQ=25) tCCACGATAAAGTGCGGCAtggtgggggctttaga < 1:3043947‑M2/35‑17 (MQ=255) tCCACGATAAAGTGCGGCATGGTGGTTCCTTAcgc < 1:20464295/35‑1 (MQ=255) tCCACGATAAAGTGCGGCATGGTGGTTCCTTAcgc < 1:19771145/35‑1 (MQ=255) tCCACGATAAAGTGCGGCATGGTGGTTCCTTAcgc < 1:19271023/35‑1 (MQ=255) tCCACGATAAAGTGCGGCATGGTGGGTGCTTCcga > 1:476241/1‑34 (MQ=21) ctcACGATAAAGTGCGGCATGGTGGTTCCTTAcgc < 1:11811668/33‑1 (MQ=255) cACGATAAAGTGCGGCAtggtgggggcttttgcgg < 1:3656272‑M2/35‑19 (MQ=255) cACGATAAAGTGCGGCATGGTGGTTCCTTACGCgg < 1:15167608/35‑1 (MQ=255) aCGATAAAGTGCGGCAtggtgggggctttcgcggg < 1:12010927‑M2/35‑20 (MQ=255) aCGATAAAGTGCGGCAtggtgggggctttcgcggg < 1:3593437‑M2/35‑20 (MQ=255) aCGATAAAGTGCGGCATGGTGGTTCCTTACGCggg < 1:4440325/35‑1 (MQ=255) cGATAAAGTGCGGCATGGTGGTTCCTTACGCGGGc < 1:13234694/35‑1 (MQ=255) cGATAAAGTGCGGCATGGTGGTTCCTTACGCGGGc < 1:4235214/35‑1 (MQ=255) aTAAAGTGCGGCATGGTGGTTCCTTACGCGGGCAg < 1:18146650/35‑1 (MQ=255) aTAAAGTGCGGCATGGTGGTTCCTTACGCGGGCAg < 1:8143166/35‑1 (MQ=255) aTAAAGTGCGGCATGGTGGGGGCTTTCGCgggggg > 1:11510247/1‑32 (MQ=12) tAAAGTGCGGCATGGTGGTTCCTTACGCGGGCAGc < 1:10798582/35‑1 (MQ=255) tAAAGTGCGGCATGGTGATTCCTTACGCGGGCAGc < 1:15216919/35‑1 (MQ=255) tctgTGCGGCATGGTGGTTCCTTACGCGGGCAGCg < 1:857816/32‑1 (MQ=255) aaaGTGCGGCATGGTGGTTCCTTACGCGGGCAGCg < 1:5516897/35‑1 (MQ=255) aaaGTGCGGCATGGTGGTTCCTTACGCGGGCAGCg < 1:6881524/35‑1 (MQ=255) aaaGTGCGGCATGGTGGTTCCTTACGCGGGCAGCg < 1:2312504/35‑1 (MQ=255) aaGTGCGGCATTGTGGTTCCTTACGCGGGCAGCgg > 1:9266123/1‑35 (MQ=255) gCGGCATGGTGGTTCCTTACGCGGGCAGCGGGaaa < 1:9688323/35‑1 (MQ=255) gCGGCATGGTGGTTCCTTACGCGGGCAGCGGGaaa < 1:11915824/35‑1 (MQ=255) cGGCATGGTGGTTCCTTACGCGGGCAGCGGGaaaa < 1:5426951/35‑1 (MQ=255) ggCATGGTGGTTCCTTACGCGGGCAGCGGGAAAAc < 1:9671065/35‑1 (MQ=255) ggCATGGTGGTTCCTTACGCGGGCAGCGGGAAAAc < 1:13346096/35‑1 (MQ=255) gCATGGTGGTTCCTTACGCGGGCAGCGGGGAAACa > 1:3911027/1‑35 (MQ=255) gCATGGTGGTTCCTTACGCGGGCAGCGGGAAAACa < 1:14810198/35‑1 (MQ=255) gCATGGTGGTTCCTTACGCGGGCAGCGGGAAAACa < 1:14598631/35‑1 (MQ=255) gCATGGTGGTTCCTTACGCGGGCAGCGGGAAAACa < 1:1350601/35‑1 (MQ=255) gCATGGTGGTTCCTTACGCGGGCAGCGGGAAAACa < 1:16050330/35‑1 (MQ=255) gCATGGTGGGTCCTTACGCGGGCAGCGGGGAAACa > 1:8042480/1‑35 (MQ=37) cATGGTGGTTCCTTACGCGGGCAGCGGGAAAACAg < 1:15823918/35‑1 (MQ=255) cATGGTGGTTCCTTACGCGGGCAGCGGGAAAACAg < 1:30110/35‑1 (MQ=255) aTGGTGGTTCCTTACGCGGGCAGCGGGAAAACAGc < 1:10466743/35‑1 (MQ=255) aTGGTGGTTCCTTACGCGGGCAGCGGGAAAACAGc < 1:6411875/35‑1 (MQ=255) | AATATTTTCAGTACATTCCACGATAAAGTGCGGCATGGTGGTTCCTTACGCGGGCAGCGGGAAAACAGC > REL606/4576405‑4576473 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |