New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 954088 =106 (1.030)4 (0.040) 3/48 NT 4.2% coding (3807/4029 nt) ftsK DNA‑binding membrane protein required for chromosome resolution and partitioning
?REL606 4604384 = 76 (0.740)coding (394/864 nt) yjjW predicted pyruvate formate lyase activating enzyme

Only 100 of 125 total aligned reads displayed.

AGTTGCGGATCGTTTTTGATAGCAGTAAACAGCGCCACCACAAACGGCAGCTGGGTCGTGGCTTCACCG  >  REL606/4604350‑4604418
                                  |                                  
aGTTGCGGATCGTTTTTGATAGCAGTAAACAgcgc                                    >  1:3265361/1‑35 (MQ=255)
aGTTGCGGATCGTTTTTGATAGCAGTAAACAgcgc                                    <  1:13082803/35‑1 (MQ=255)
aGTTGCGGATCGTTTTTGATAGCAGTAAACAgagc                                    >  1:9948057/1‑35 (MQ=255)
 gTTGCGGATCGTTTTTGATAGCAGTAAACAGCGcc                                   <  1:980617/35‑1 (MQ=255)
 gTTGCGGATCGTTTTTGATAGCAGTAAACAGCGcc                                   <  1:4816773/35‑1 (MQ=255)
 gTTGCGGATCGTTTTTGATAGCAGTAAACAGCGcc                                   <  1:2357651/35‑1 (MQ=255)
 gTTGCGGATCGTTTTTGATAGCAGTAAACAGCGcc                                   <  1:384164/35‑1 (MQ=255)
  ttGCGGATCGTTTTTGATAGCAGTAAACAGCGcca                                  >  1:1749733/1‑35 (MQ=255)
  ttGCGGATCGTTTTTGATAGCAGTAAACAGCGcca                                  <  1:8718205/35‑1 (MQ=255)
   tGCGGATCGTTTTTGATAGCAGTAAACAGCGccac                                 <  1:5426379/35‑1 (MQ=255)
   tGCGGATCGTTTTTGATAGCAGTAAACAGCGccac                                 >  1:837923/1‑35 (MQ=255)
   tGCGGATCGTTTTTGATAGCAGTAAACAGCGccac                                 <  1:3128809/35‑1 (MQ=255)
    gCGGATCGTTTTTGATAGCAGTAAACAGCGccacc                                >  1:10922755/1‑35 (MQ=255)
    gCGGATCGTTTTTGATAGCAGTAAACAGCGccacc                                >  1:2873737/1‑35 (MQ=255)
     cGGATCGTTTTTGATAGCAGTAAACAGCGccacca                               <  1:17255958/35‑1 (MQ=255)
     cGGATCGTTTTTGATAGCAGTAAACAGCGccacca                               <  1:10158532/35‑1 (MQ=255)
     cGGATCGTTTTTGATAGCAGTAAACAGCGccacca                               <  1:1295186/35‑1 (MQ=255)
     cGGATCGTTTTTGATAGCAGTAAACAGAGccacca                               <  1:19248654/35‑1 (MQ=255)
      ggATCGTTTTTGATAGCAGTAAACAGCGCcaccac                              >  1:17682426/1‑35 (MQ=255)
      ggATCGTTTTTGATAGCAGTAAACAGCGCcaccac                              >  1:20591483/1‑35 (MQ=255)
      ggATCGTTTTTGATAGCAGTAAACAGCGCcaccac                              >  1:9528617/1‑35 (MQ=255)
       gATCGTTTTTGATAGCAGTAAACAGCGCCACcaca                             >  1:14454611/1‑35 (MQ=255)
       gATCGTTTTTGATAGCAGTAAACAGCGCCACcaca                             >  1:748250/1‑35 (MQ=255)
       gATCGTTTTTGATAGCAGTAAACAGCGCCACcaca                             >  1:17444445/1‑35 (MQ=255)
        aTCGTTTTTGATAGCAGTAACCAGCGCCACCACaa                            >  1:9391296/1‑35 (MQ=255)
        aTCGTTTTTGATAGCAGTAAACAGCGCCACCACaa                            >  1:8790263/1‑35 (MQ=255)
        aTCGTTTTTGATAGCAGTAAACAGCGCCACCACaa                            >  1:3117412/1‑35 (MQ=255)
        aTCGTTTTTGATAGCAGTAAACAGCGCCACCACaa                            >  1:16970987/1‑35 (MQ=255)
        aTCGTTTTTGATAGCAGTAAACAGCGCCACCACaa                            >  1:15959465/1‑35 (MQ=255)
        aTCGTTTTTGATAGCAGTAAACAACGCCACCACaa                            >  1:8274330/1‑35 (MQ=255)
         tCGTTTTTGATAGCAGTAAACAGCGCCACCACaaa                           >  1:19387522/1‑35 (MQ=255)
         tCGTTTTTGATAGCAGTAAACAGCGCCACCACaaa                           >  1:19971675/1‑35 (MQ=255)
         tCGTTTTTGATAGCAGTAAACAGCGCCACCACaaa                           >  1:9230895/1‑35 (MQ=255)
          cGTTTTTGATAGCAGTAAACAGCGCCACCACAAAc                          >  1:3857039/1‑35 (MQ=255)
           gTTTTTGATAGCAGTAAACAGCGCCACCACAAACg                         >  1:19986253/1‑35 (MQ=255)
           gTTTTTGATAGCAGTAAACAGCGCCACCACAAACg                         >  1:1499894/1‑35 (MQ=255)
           gTTTTTGATAGCAGTAAACAGCGCCACCACAAACg                         >  1:7388800/1‑35 (MQ=255)
           gTTTTTGATAGCAGTAAACAGCGCCACCACAAACg                         >  1:13549014/1‑35 (MQ=255)
           gTTTTTGATAGCAGTAAACAGCGCCACCACAAACg                         >  1:12206086/1‑35 (MQ=255)
           gTTTTTGATAGCAGTAAACAGCGCCACCACAAACg                         >  1:11521231/1‑35 (MQ=255)
             ttttGATAGCAGTAAACAGCGCCACCACAAACGGc                       >  1:8681750/1‑35 (MQ=255)
             ttttGATAGCAGTAAACAGCGCCACCACAAACGGc                       >  1:12620111/1‑35 (MQ=255)
              tttGATAGCAGTAAACAGCGCCACCACAAACGGCa                      >  1:17616357/1‑35 (MQ=255)
              tttGATAGCAGTAAACAGCGCCACCACAAACGGCa                      >  1:6893222/1‑35 (MQ=255)
               ttGATAGCAGTAAACAGCGCCACCACAAACGGCAg                     >  1:10678150/1‑35 (MQ=255)
               ttGATAGCAGTAAACAGCGCCACCACAAACGGCAg                     >  1:20392773/1‑35 (MQ=255)
               ttGATAGCAGTAAACAGCGCCACCACAAACGGCAg                     >  1:6999129/1‑35 (MQ=255)
                tGATAGCAGTAAACAGCGCCACCACAAACGGCAgg                    >  1:2685547/1‑34 (MQ=255)
                 gATAGCAGTAAACAGCGCCACCACAAACGGCAGCt                   >  1:16133627/1‑35 (MQ=255)
                  aTAGCAGTAAACAGCGCCACCACAAACTGCAGCTg                  >  1:5275957/1‑35 (MQ=255)
                  aTAGCAGTAAACAGCGCCACCACAAACGGCAGcgg                  >  1:1968097/1‑33 (MQ=255)
                  aTAGCAGTAAACAGCGCCACCACAAACGGCAGccg                  >  1:10674471/1‑33 (MQ=255)
                   tAGCAGTAAACAGCGCCACCACAAACGGCAGGTgg                 >  1:4558810/1‑35 (MQ=255)
                   tAGCAGTAAACAGCGCCACCACAAACGGCAGCGgg                 >  1:10758641/1‑35 (MQ=255)
                    aGCAGTAAACAGCGCCACCACAAACGGCAGGTggg                >  1:14144870/1‑35 (MQ=255)
                    aGCAGTAAACAGCGCCACCACAAACGGCAGCTggg                >  1:11970876/1‑35 (MQ=255)
                    aGCAGTAAACAGCGCCACCACAAACGGCAGCAggg                >  1:6322619/1‑35 (MQ=255)
                     gCAGTAAACAGCGCCACCACAAACGGCAGCTgggg               >  1:9430922/1‑34 (MQ=255)
                      cAGTAAACAGCGCCACCACAAACGGCAGCTGGGTc              >  1:7249350/1‑35 (MQ=255)
                       aGTAAACAGCGCCACCACAAACGGCAGCTGGGGCg             >  1:12104839/1‑35 (MQ=255)
                        gaaaccacccCCACCACAAACGGCAGCTGGGTCGt            <  1:1095070‑M2/25‑1 (MQ=255)
                        aaaaaCAGCGCCACCACAAACGGCAGCTGGGTCGt            <  1:8035022/33‑1 (MQ=255)
                         tAAACAGCGCCACCACAAACGGCAGGCGGGTCggg           >  1:16230595/1‑33 (MQ=25)
                         tAAACAGCGCCACCACAAACGGCAGCTGGGTCggg           >  1:18292337/1‑33 (MQ=255)
                         tAAACAGCGCCACCACAAACGGCAGCTGGGTCGTg           >  1:12537523/1‑35 (MQ=255)
                         tAAACAGCGCCACCACAAACGGCAGCTGGGGCGTg           >  1:752350/1‑35 (MQ=255)
                         tAAACAGCGCCACCACAAACGGCAGCTGGGGCGTg           >  1:7045303/1‑35 (MQ=255)
                         tAAACAGCGCCACCACAAACGGCAGCTGGGGCGTg           >  1:9989012/1‑35 (MQ=255)
                         tAAACAGCGCCACCACAAACGGCAGCTGGGGCGTg           >  1:4233229/1‑35 (MQ=255)
                         aaaccagccCCACCACAAACGGCAGCTGGGTCGTg           <  1:10157600‑M2/26‑1 (MQ=255)
                         aaaccacccCCACCACAAACGGCAGCTGGGTCGTg           <  1:3762258‑M2/26‑1 (MQ=255)
                         aaaaCAGCGCCACCACAAACGGCAGCTGGGTCGTg           <  1:10293018/34‑1 (MQ=255)
                          aaaCAGCGCCACCACAAACGGCAGGTGGGTCGTgg          >  1:7930277/1‑35 (MQ=255)
                          aaaCAGCGCCACCACAAACGGCAGCTGGGGCGTgg          >  1:17728509/1‑35 (MQ=255)
                           aaCAGCGCCACCACAAACGTCAGCTGGGTCGTGGc         >  1:490413/1‑35 (MQ=255)
                           aaCAGCGCCACCACAAACGGCAGCTGGGGCGTAGc         >  1:19012313/1‑35 (MQ=25)
                            ccagccCCACCACAAACGGCAGCTGGGTCGTGGCt        <  1:8232443‑M2/29‑1 (MQ=255)
                            aCAGCGCCACCACAAACGGCAGGTGGGGCGTGGCt        >  1:3666958/1‑35 (MQ=25)
                            aCAGCGCCACCACAAACGGCAGCTGGGTCGTGGCt        >  1:11158463/1‑35 (MQ=255)
                             cAGCGCCACCACAAACTGCAGCTGGGTCGTGGCtt       >  1:8583766/1‑35 (MQ=255)
                             cAGCGCCACCACAAACGGCAGCTGGGTCGTGGCtt       >  1:10820344/1‑35 (MQ=255)
                             cAGCGCCACCACAAACGGCAGCTGGGTCGTGGCtt       >  1:12279612/1‑35 (MQ=255)
                             cAGCGCCACCACAAACGGCAGCTGGGGCGTGGCtt       >  1:10048184/1‑35 (MQ=255)
                              gccgcCCCCACAAACGGCAGCTGGGTCGTGGCTTc      <  1:172066/33‑1 (MQ=38)
                              gcccCCACCACAAACGGCAGCTGGGTCGTGGCTTc      <  1:2691830‑M2/31‑1 (MQ=255)
                              agccCCACCACAAACGGCAGCTGGGTCGTGGCTTc      <  1:7672301‑M2/31‑1 (MQ=255)
                              agccCCACCACAAACGGCAGCTGGGTCGTGGCTTc      <  1:15957133‑M2/31‑1 (MQ=255)
                              accgcCACCACAAACGGCAGCTGGGTCGTGGCTTc      <  1:8396345/33‑1 (MQ=255)
                               cccCCACCACAAACGGCAGCTGGGTCGTGGCTTCa     <  1:1526255‑M2/32‑1 (MQ=255)
                               cccCCACCACAAACGGCAGCTGGGTCGTGGCTTCa     <  1:7293477‑M2/32‑1 (MQ=255)
                               cccCCACCACAAACGGCAGCTGGGTCGTGGCTTCa     <  1:1340119‑M2/32‑1 (MQ=255)
                                ccCCACCACAAACGGCAGCTGGGTCGTGGCTTCAc    <  1:4970207‑M2/33‑1 (MQ=255)
                                ccCCACCACAAACGGCAGCTGGGTCGTGGCTTCAc    <  1:15525662‑M2/33‑1 (MQ=255)
                                ccCCACCACAAACGGCAGCTGGGTCGTGGCTTCAc    <  1:15287296‑M2/33‑1 (MQ=255)
                                 gcCTCCACAAACGGCAGCTAGGTCGTGGCTTCAcc   <  1:5340885/35‑1 (MQ=38)
                                 gcCACCACAAACGGCAGCTGGGTCGTGGCTTTAcc   >  1:13847119/1‑35 (MQ=255)
                                 gcCACCACAAACGGCAGCTGGGGCGTGGGTTTAcc   >  1:13846454/1‑35 (MQ=25)
                                 cCCACCACAAACGGCAGCTGGGTCGTGGCTTCAcc   <  1:14482802‑M2/34‑1 (MQ=255)
                                 cCCACCACAAACGGCAGCTGGGTCGTGGCTTCAcc   <  1:15138322‑M2/34‑1 (MQ=255)
                                  ccaccaCAAACGGCAGCTGGGTCGTGGCTTCACCg  <  1:9765842/35‑1 (MQ=255)
                                  |                                  
AGTTGCGGATCGTTTTTGATAGCAGTAAACAGCGCCACCACAAACGGCAGCTGGGTCGTGGCTTCACCG  >  REL606/4604350‑4604418

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.