New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2949571 | 69 (0.670) | 15 (0.150) | 5/46 | NT | 14.6% | coding (834/996 nt) | argK | arginine/ornithine transport system ATPase |
? | REL606 | = 3728925 | 109 (1.110) | coding (59/960 nt) | yibQ | predicted polysaccharide deacetylase |
Only 100 of 159 total aligned reads displayed.
AACAAGTGCGGCAACAACAATCGGTGGAATGGCTGCGTAAGCAGACCGAAGAAGAAGTACTGAATCACC > REL606/2949537‑2949605 | aacaaGTGCGGCAACAACAATCGGTGGAATGGCTG < 1:20335243‑M1/35‑1 (MQ=255) aacaaGTGCGGCAACAACAATCGGTGGAATGGCTG > 1:17045207‑M1/1‑35 (MQ=255) acaaGTGGGGCAACAACAATCGGTGGAATGGCTGc < 1:1095937/35‑1 (MQ=255) acaaGTGCGGCAACAACAATCGGTGGAATGGCTGg > 1:16009788‑M1/1‑34 (MQ=255) acaaGTGCGGCAACAACAATCGGTGGAATGGCTGc < 1:2555277/35‑1 (MQ=255) acaaGGGCAGCAACAACAATCGGTGGAATGGCTGc < 1:15036563/35‑1 (MQ=37) caaGTGCGGCAACAACAATCGGTGGAATGGCTGgg > 1:9067321‑M1/1‑33 (MQ=255) caaGTGCGGCAACAACAATCGGTGGAATGGCTGgg > 1:2656228‑M1/1‑33 (MQ=255) caaGTGCGGCAACAACAATCGGTGGAATGGCTGgg > 1:11616438‑M1/1‑33 (MQ=255) caaGTGCGGCAACAACAATCGGTGGAATGGCTGCg < 1:7141791/35‑1 (MQ=255) caaGTGCGGCAACAACAATCGGTGGAATGGCTGCg < 1:16358930/35‑1 (MQ=255) caaGTGCGGCAACAACAATCGGTGGAATGGCTGCg < 1:13741473/35‑1 (MQ=255) aaGTGCGGCAACAACAATCGGTGGAATGGCTGggg > 1:6425052‑M1/1‑32 (MQ=255) aaGTGCGGCAACAACAATCGGTGGAATGGCTGggg > 1:2797020‑M1/1‑32 (MQ=255) aaGTGCGGCAACAACAATCGGTGGAATGGCTGggg > 1:176164‑M1/1‑32 (MQ=255) aaGTGCGGCAACAACAATCGGTGGAATGGCTGCGt < 1:3273979/35‑1 (MQ=255) aaGTGCGGCAACAACAATCGGTGGAATGGCTGCGt < 1:9573579/35‑1 (MQ=255) aaGTGCGGCAACAACAATAGGTGGAATGGCTGCGt < 1:19277305/35‑1 (MQ=255) attGCGGCAACAACAATCGGTGGAATGGCTGCGTa < 1:696655/33‑1 (MQ=255) gTGCGGCAACAACAATCGGTGGAATGGCTGgggga > 1:9888343‑M1/1‑30 (MQ=255) gTGCGGCAACAACAATCGGTGGAATGGCTGCGTaa < 1:4406666/35‑1 (MQ=255) gTGCGGCAACAACAATCGGTGGAATGGCTGCGTaa < 1:3730719/35‑1 (MQ=255) tGCGGCAACAACAATCGGTGGAATGGCTGggggag > 1:5490969‑M1/1‑29 (MQ=255) tGCGGCAACAACAATCGGTGGAATGGCTGCGTAAg < 1:14422491/35‑1 (MQ=255) tGCGGCAACAACAATCGGTGGAATGGCTGCGTAAg < 1:15659892/35‑1 (MQ=255) tGCGGCAACAACAATCGGTGGAATGGATGCGTAAg < 1:7563209/35‑1 (MQ=255) gCGGCAACAACAATCGGTGGAATGGCTGCGTAAGc < 1:15116672/35‑1 (MQ=255) gCGGCAACAACAATCGGTGGAATGGCTGCGTAAGc < 1:19105067/35‑1 (MQ=255) cGGCAACAACAATCGGTGGAATGGCTGCGTAAGCa < 1:10184711/35‑1 (MQ=255) cGGCAACAACAATCGGTGGAATGGCTGCGTAAGCa < 1:9896498/35‑1 (MQ=255) cGGCAACAACAATCGGTGGAATGGCTGCGTAAGCa < 1:15079625/35‑1 (MQ=255) cGGCAACAACAATCGGTGGAATGGCTGCGTAAGCa < 1:15275745/35‑1 (MQ=255) ggCAACAACAATCGGTGGAATGGCTGgggggggag > 1:6426033‑M1/1‑26 (MQ=255) ggCAACAACAATCGGTGGAATGGCTGggggaggag > 1:17997799‑M1/1‑26 (MQ=255) ggCAACAACAATCGGTGGAATGGCTGCGTAAGCAg < 1:20516841/35‑1 (MQ=255) ggCAACAACAATCGGTGGAATGGCTGCGTAAGCAg < 1:13083619/35‑1 (MQ=255) ggCAACAACAATCGGTGGAATGGCTGCGTAAGCAg < 1:15281880/35‑1 (MQ=255) ggCAACAACAATAGGTGGAATGGCTGCGTAAGCAg < 1:9481474/35‑1 (MQ=255) gCAACAACAATCGGTGGAATGGCTGCGTAAGCAGa < 1:58205/35‑1 (MQ=255) caacaacaaTCGGTGGAATGGCTGggggaggagaa > 1:17955610‑M1/1‑24 (MQ=255) caacaacaaTCGGTGGAATGGCTGCGTAAGCAGAc < 1:14202881/35‑1 (MQ=255) caacaacaaTCGGTGGAATGGCTGCGTAAGCAGAc < 1:8223324/35‑1 (MQ=255) aacaacaaTCGGTGGAATGGCTGggggaggagagc > 1:9133808‑M1/1‑23 (MQ=255) aacaacaaTCGGTGGAATGGCTGCGTAAGCAGAcc < 1:11771751/35‑1 (MQ=255) aacaacaaTCGGTGGAATGGCTGCGTAAGCAGAcc < 1:7196972/35‑1 (MQ=255) aacaacaaTCGGTGGAATGGCTGCGTAAGCAGAcc < 1:7037070/35‑1 (MQ=255) aacaacaaTCGGTGGAATGGCTGCGTAAGCAGAcc < 1:13684694/35‑1 (MQ=255) acaataaTCGGTGGAATGGCTGggggaggagagcg > 1:2056057‑M1/1‑22 (MQ=255) acaacaaTCGGTGGAATGGCTGggggaggagaccc > 1:19103559‑M1/1‑22 (MQ=255) acaacaaTCGGTGGAATGGCTGggggaggagaacg > 1:11428225‑M1/1‑22 (MQ=255) acaacaaTCGGTGGAATGGCTGCGTAAGCAGACCg < 1:17004475/35‑1 (MQ=255) caacaaTCGGTGGAATGGCTGCGTAAGCAGACCga < 1:12524971/35‑1 (MQ=255) acaaTCGGTGGAATGGCTGCGTAAGCAGACCgaag < 1:19926732/35‑1 (MQ=255) acaaTCGGTGGAATGGCTGCGTAAGCAGACCgaag < 1:3643593/35‑1 (MQ=255) caaTCGGTGGAATGGCTGCGTAAGCAGACCgaaga < 1:3320518/35‑1 (MQ=255) aaTCGGTGGAATGGCTGCGTAAGCAGACCgaagaa < 1:19299746/35‑1 (MQ=255) aaTCGGTGGAATGGCTGCGTAAGCAGACCgaagaa < 1:17302549/35‑1 (MQ=255) aaTCGGTGGAATGGCTGCGTAAGCAGACCgaagaa < 1:11636976/35‑1 (MQ=255) aaTCGGTGGAATGGCTGCGTAAGCAGACCgaagaa < 1:18654024/35‑1 (MQ=255) aTCGGTGGAATGGCTGCGTAAGCAGACCgaagaag < 1:1664338/35‑1 (MQ=255) tCGGTGGAATGGCTGCGTAAGCAGACCgaagaaga < 1:5457525/35‑1 (MQ=255) tCGGTGGAATGGCTGCGTAAGCAGACCgaagaaga < 1:8842609/35‑1 (MQ=255) cGGTGGAATGGCTGCGTAAGCAGACCgaagaagag < 1:7052754/35‑2 (MQ=255) cGGTGGAATGGCTGCGTAAGCAGACCgaagaagaa < 1:13515109/35‑1 (MQ=255) ggTGGAATGGCTGCGTAAGCAGACCGaagaagaag < 1:17281400/35‑1 (MQ=255) gTGGAATGGCTGCGTAAGCAGACCGAAGAAGAAGt < 1:1855907/35‑1 (MQ=255) gTGGAATGGCTGCGTAAGCAGACCGAAGAAGAAGt < 1:6999400/35‑1 (MQ=255) gTGGAATGGCTGCGTAAGCAGACCGAAGAAGAAGt < 1:9178892/35‑1 (MQ=255) gTGGAATGGCTGCGTAAGCAGACCGAAGAAGAAGt < 1:5137983/35‑1 (MQ=255) tGGAATGGCTGCGTAAGCAGACCGAAGAAGAAGTa < 1:4832072/35‑1 (MQ=255) tGGAATGGCTGCGTAAGCAGACCGAAGAAGAAGTa < 1:4994718/35‑1 (MQ=255) aaTGGCTGCGTAAGCAGACCGAAGAAGAAGTACTg < 1:13419258/35‑1 (MQ=255) aTGGCTGCGTAAGCAGACCGAAGAAGAAGTACTGa < 1:13704370/35‑1 (MQ=255) aTGGCTGCGTAAGCAGACCGAAGAAGAAGTACTGa < 1:12359682/35‑1 (MQ=255) aTGGCTGCGTAAGCAGACCGAAGAAGAAGTACTGa < 1:2343032/35‑1 (MQ=255) aTGGCTGCGTAAGCAGACCGAAGAAGAAGTACTGa < 1:2662553/35‑1 (MQ=255) tGGCTGCGTAAGCAGACCGAAGAAGAAGTACTGaa < 1:12136068/35‑1 (MQ=255) tGGCTGCGTAAGCAGACCGAAGAAGAAGTACTGaa < 1:3991109/35‑1 (MQ=255) tGGCTGCGTAAGCAGACCGAAGAAGAAGTACTGaa < 1:12941664/35‑1 (MQ=255) ggCTGCGTAAGCAGACCGAAGAAGAAGTACTGAAt < 1:18175383/35‑1 (MQ=255) ggCTGCGTAAGCAGAACGAAGAAGAAGTACTGAAt < 1:18800344/35‑1 (MQ=255) gCTGCGTAAGCAGACCGAAGAAGAAGTACTGAATc > 1:17569315/1‑35 (MQ=255) gCTGCGTAAGCAGACCGAAGAAGAAGTACTGAATc < 1:15866681/35‑1 (MQ=255) cTGCGTAAGCAGACAGAAGAAGAAGTACTGAATCa < 1:20309001/35‑1 (MQ=255) tGCGTAAGCAGACCGAAGAAGAAGTACTGAATCAc > 1:9939992/1‑35 (MQ=255) tGCGTAAGCAGACCGAAGAAGAAGTACTGAATCAc > 1:6216790/1‑35 (MQ=255) tGCGTAAGCAGACCGAAGAAGAAGTACTGAATCAc < 1:13954540/35‑1 (MQ=255) tGCGTAAGCAGACCGAAGAAGAAGTACTGAATCAc > 1:10815805/1‑35 (MQ=255) tGCGTAAGCAGAACGAAGAAGAAGTACTGAATCAc < 1:11461042/35‑1 (MQ=255) gggggaggagagcgccaacagagcggcaaatgcaa < 1:6270524‑M1/35‑35 (MQ=255) gggggaggagagcgccaacagagcggcaaatgcaa > 1:8245993‑M1/1‑1 (MQ=255) gggggaggagagcgccaacagagcggcaaatgcaa < 1:8562182‑M1/35‑35 (MQ=255) gggggaggagagcgccaacagagcggcaaatgcaa < 1:877285‑M1/35‑35 (MQ=255) gggggaggagagcgccaacagagcggcaaatgcaa < 1:2937964‑M1/35‑35 (MQ=255) gggggaggagagcgccaacagagcggcaaatgcaa > 1:2789503‑M1/1‑1 (MQ=255) gggggaggagagcgccaacagagcggcaaatgcaa < 1:2456849‑M1/35‑35 (MQ=255) gggggaggagagcgccaacagagcggcaaatgcaa > 1:17028697‑M1/1‑1 (MQ=255) gggggaggagagcgccaacagagcggcaaatgcaa > 1:12928429‑M1/1‑1 (MQ=255) gCGTAAGCAGACCGAAGAAGAAGTACTGAATCAcc < 1:4555047/35‑1 (MQ=255) gCGTAAGCAGACCGAAGAAGAAGTACTGAATCAcc < 1:10137739/35‑1 (MQ=255) | AACAAGTGCGGCAACAACAATCGGTGGAATGGCTGCGTAAGCAGACCGAAGAAGAAGTACTGAATCACC > REL606/2949537‑2949605 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |