Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 1,162,790 IS150 (–) +3 bp 41.7% coding (601‑603/1071 nt) plsX → fatty acid/phospholipid synthesis protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 664688 =NA (NA)45 (0.480) 28/44 NT 38.5% noncoding (1/1443 nt) IS150 repeat region
?REL606 1162790 = 62 (0.760)coding (601/1071 nt) plsX fatty acid/phospholipid synthesis protein
* ? REL606 = 666130NA (NA)46 (0.450) 24/48 NT 38.2% noncoding (1443/1443 nt) IS150 repeat region
?REL606 = 1162792 65 (0.720)coding (603/1071 nt) plsX fatty acid/phospholipid synthesis protein

ATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/664719‑664688
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caGCGGTGCTTAAAACAATCCCTTCTATCAATTATA  >  REL606/1162790‑1162823
                                                                  
ATTTCATCGTCCAACAAAATGGGTGCAGTAGAGCG                                 <  1:5318983/35‑1
    CATCGTCCAACAAAATGGGTGCAGTACAGCGGTGC                             <  1:1360710/35‑1
     ATCGTCCAACAAAATGGGTGCAGTACAGCGGTGCT                            <  1:12065471/35‑1
     ATCGTCAAACAAAATGGGTGCAGTACAGCGGTGCT                            <  1:16591455/35‑1
      TCGTCCAACAAAATGGGTGCAGTACAGCGGTGCTT                           <  1:4764791/35‑1
      TCGTCCAACAAAATGGGTGCAGTACAGCGGTGCTT                           >  1:14233883/1‑35
       CGTCCAACAAAATGGGTGCAGTACAGCGGTGCTTA                          >  1:9152697/1‑35
       CGTCCAACAAAATGGGTGCAGTACAGCGGTGCTTA                          <  1:716019/35‑1
       CGTCCAACAAAATGGGTGCAGTACAGCGGTGCTTA                          <  1:11114065/35‑1
       CGTCCAACAAAATGGGTGCAGTACAGCGGTGCTTA                          <  1:11950279/35‑1
       CGTCCAACAAAATGGGTGCAGTACAGCGGTGCTTA                          <  1:3692775/35‑1
        GTCCAACAAAATGGGTGCAGTACAGCGGTGCTTAA                         >  1:13223400/1‑35
         TCCAACAAAATGGGTGCAGTACAGCGGTGCTTAAA                        >  1:18004246/1‑35
          CCAACAAAATGGGTGCAGTACAGCGGTGCTTAAAA                       >  1:19821404/1‑35
           CAACAAAATGGGTGCAGTACAGCTGTGCTTAAAAC                      >  1:3847802/1‑35
            AACAAAATGGGTGCAGTACAGCGGTGCTTAAAACA                     <  1:12486947/35‑1
            AACAAAATGGGTGCAGTACAGCGGTGCTTAAAACA                     >  1:15800701/1‑35
            AACAAAATGGGTGCAGTACAGCGGTGCTTAAAACA                     <  1:15827723/35‑1
             ACAAAATGGGTGCAGTACAGCGGTGCTTAAAACAA                    <  1:18644960/35‑1
              CAAAATGGGTGCAGTACAGCGGTGCTTAAAACAAT                   >  1:3891616/1‑35
              CAAAATGGGTGCAGTACAGCGGTGCTTAAAACAAT                   >  1:12264832/1‑35
              CAAAATGGGTGCAGTACAGCGGTGCTTAAAACAAT                   <  1:5573821/35‑1
              CAAAATGGGTGCAGTACAGCGGTGCTTAAAACAAT                   <  1:10089693/35‑1
               AAAATGGGTGCAGTACAGCGGTGCTTAAAACAATC                  >  1:12240526/1‑35
                AAATGGGTGCAGTACAGCGGTGCTTAAAACAATCC                 <  1:4208932/35‑1
                AAATGGGTGCAGTACAGCGGTGCTTAAAACAATCC                 <  1:3555604/35‑1
                 AATGGGTGCAGTACAGCGGTGCTTAAAACAATCCC                <  1:2281084/35‑1
                 AATGGGTGCAGTACAGCGGTGCTTAAAACAATCCC                <  1:19577791/35‑1
                 AATGGGTGCAGTACAGCGGTGCTTAAAACAATCCC                <  1:14317549/35‑1
                  ATGGGTGCAGTACAGCGGTGCTTAAAACAATCCCT               >  1:11158957/1‑35
                   TGGGTGCAGTACAGCGGTGCTTAAAACAATCCCTT              >  1:5924259/1‑35
                   TGGGTGCAGTACAGCGGTGCTTAAAACAATCCCTT              >  1:15275970/1‑35
                    GGGTGCATTACAGCGGTGCTTAAAACAATCCCTTC             >  1:12273099/1‑35
                    GGGTGCAGTACAGCGGTGCTTAAAACAATCCCTTC             <  1:11841823/35‑1
                    GGGTGCAGTACAGCGGTGCTTAAAACAATCCCTTC             <  1:3315080/35‑1
                    GGGTGCAGTACAGCGGTGCTTAAAACAATCCCTTC             >  1:16431358/1‑35
                     GGTGCAGTACATCGGTGCTTAAAACAATCCCTTCT            >  1:19298126/1‑35
                     GGTGCAGTACAGCGGTGCTTAAAACAATCCCTTCT            >  1:16409843/1‑35
                     GGTGCAGTACAGCGGTGCTTAAAACAATCCCTTCT            <  1:2603004/35‑1
                     GGTGCAGTACAGCGGTGCTTAAAACAATCCCTTCT            <  1:2661994/35‑1
                     GGTGCAGTACAGCGGTGCTTAAAACAATCCCTTCT            >  1:1384093/1‑35
                      GTGCAGTACAGCGGTGCTTAAAACAATCCCTTCTA           >  1:2154962/1‑35
                      GTGCAGTACAGCGGTGCTTAAAACAATCCCTTCTA           <  1:7398383/35‑1
                       TGCAGTACAGCGGTGCTTAAAACAATCCCTTCTAT          <  1:15206981/35‑1
                       TGCAGTACAGCGGTGCTTAAAACAATCCCTTATAT          <  1:7580744/35‑1
                        GCAGTACAGCGGTGCTTAAAACAATCCCTTCTATC         >  1:7052298/1‑35
                         CAGTACAGCGGTGCTTAAAACAATCCCTTCTATCA        <  1:17535021/35‑1
                         CAGTACAGCGGTGCTTAAAACAATCCCTTCTATCA        <  1:16931256/35‑1
                         CAGTACAGCGGTGCTTAAAACAATCCCTTCTATCA        <  1:2815221/35‑1
                          AGTACAGCGGTGCTTAAAACAATCCCTTCTATCAA       <  1:3480627/35‑1
                          AGTACAGCGGTGCTTAAAACAATCCCTTCTATCAA       <  1:873773/35‑1
                           GTACAGCGGTGCTTAAAACAATCCCTTCTATCAAT      >  1:18476720/1‑35
                           GTACAGCGGTGCTTAAAACAATCCCTTCTATCAAT      >  1:10631561/1‑35
                           GTACAGCGGTGCTTAAAACAATCCCTTCTATCAAT      >  1:7330664/1‑35
                           GTACAGCGGTGCTTAAAACAATCCCTTCTATCAAT      >  1:526494/1‑35
                           GTACAGCGGTGCTTAAAACAATCCCTTCTATCAAT      <  1:5948340/35‑1
                            TACAGCGGTGCTTAAAACAATCCCTTCTATCAATT     <  1:7407231/35‑1
                             ACAGCGGTGCTTAAAACAATCCCTTCTATCAATTA    >  1:3675438/1‑35
                              CAGCGGTGCTTAAAACAATCCCTTCTATCAATTAT   >  1:999555/1‑35
                              CAGCGGTGCTTAAAACAATCCCTTCTATCAATTAT   >  1:8186059/1‑35
                              CAGCGGTGCTTAAAACAATCCCTTCTATCAATTAT   <  1:5189335/35‑1
                              CAGCGGTGCTTAAAACAATCCCTTCTATCAATTAT   <  1:14214597/35‑1
                              CAGCGGTGCTTAAAACAATCCCTTCTATCAATTAT   >  1:18265377/1‑35
                              CAGCGGTGCTTAAAACAATCCCTTCTATCAATTAT   <  1:17260845/35‑1
                              CAGCGGTGCTTAAAACAATACCTTCTATCAATTAT   <  1:5594884/35‑1
                               AGCGGTGCTTAAAACAATCCCTTCTATCAATTATA  >  1:11581118/1‑35
                               AGCGGTGCTTAAAACAATCCCTTCTATCAATTATA  <  1:11025964/35‑1
                               AGCGGTGCTTAAAACAATCCCTTCTATCAATTATA  <  1:5199299/35‑1
                               AGCGGTGCTTAAAACAATCCCTTCTATCAATTATA  >  1:20263123/1‑35
                               AGCGGTGCTTAAAACAATCCCTTCTATCAATTATA  >  1:20246806/1‑35
                               AGCGGTGCTTAAAACAATCCCTTATATCAATTATA  <  1:18677147/35‑1
                                                                  
ATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/664719‑664688
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caGCGGTGCTTAAAACAATCCCTTCTATCAATTATA  >  REL606/1162790‑1162823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.