New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2204224 | 68 (0.660) | 16 (0.200) | 4/38 | NT | 14.9% | coding (1109/1251 nt) | yeiJ | predicted nucleoside transporter |
? | REL606 | 2724133 = | 129 (1.590) | coding (227/774 nt) | srlR | DNA‑bindng transcriptional repressor |
Only 100 of 274 total aligned reads displayed.
CCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAGT > REL606/2724099‑2724167 | ccgCCTATCGATCATAAAACACTCATCAACACCca < 1:10812027/35‑1 (MQ=255) ccgCCTATCGATCATAAAACACTCATCAACACCca > 1:18832013/1‑35 (MQ=255) ccgCCTATCGATCATAAAACACTCATCAACACCca < 1:11504695/35‑1 (MQ=255) ccgCCTATCGATCATAAAACACTCATCAACACCca > 1:11713712/1‑35 (MQ=255) gCCTATCGATCATAAAACACTCATCAACACCcatg > 1:2866249/1‑33 (MQ=255) gCCTATCGATCATAAAACACTCATCAACACCcaca > 1:7024926/1‑35 (MQ=255) ccTATCGATCATAAAACACTCATCAACACCCACaa > 1:3863330/1‑35 (MQ=255) cTATCGATCATAAAACACTCATCAACACCCACaag > 1:1364808/1‑35 (MQ=255) cTATCGATCATAAAACACTCATCAACACCCACaag > 1:19338903/1‑35 (MQ=255) cTATCGATCATAAAACACTCATCAACACCCACaag > 1:13043425/1‑35 (MQ=255) cTATCGATCATAAAACACTCATCAACACCCACaag > 1:1258507/1‑35 (MQ=255) cTATCGATCATAAAACACTCATCAACACCCACaag > 1:657511/1‑35 (MQ=255) tATCGATCATAAAACACTCATCAACACCCACaaga > 1:372429/1‑35 (MQ=255) tATCGATCATAAAACACTCATCAACACCCACaaga > 1:9379657/1‑35 (MQ=255) aTCGATCATAAAACACTCATCAACACCCACaagaa > 1:19816363/1‑35 (MQ=255) aTCGATCATAAAACACTCATCAACACCCACaagaa > 1:2580850/1‑35 (MQ=255) aTCGATCATAAAACACTCATCAACACCCACaagaa > 1:5052993/1‑35 (MQ=255) tCGATCATAAAACACTCATCAACACCCACaagaaa > 1:12354472/1‑35 (MQ=255) tCGATCATAAAACACTCATCAACACCCACaagaaa > 1:15533124/1‑35 (MQ=255) tCGATCATAAAACACTCATCAACACCCACaagaaa > 1:14861680/1‑35 (MQ=255) tCGATCATAAAACACTCATCAACACCCACaagaaa > 1:13232283/1‑35 (MQ=255) cGATCATAAAACACTCATCAACACCCACaagaaag > 1:20036015/1‑35 (MQ=255) cGATCATAAAACACTCATCAACACCCACaagaaag > 1:9510090/1‑35 (MQ=255) gATCATAAAACACTCATCAACACCCACaagaaaga > 1:10478721/1‑35 (MQ=255) aTCATAAAACACTCATCAACACCCACAAGAAagag > 1:13347604/1‑35 (MQ=255) aTCATAAAACACTCATCAACACCCACAAGAAagag > 1:14231649/1‑35 (MQ=255) aTCATAAAACACTCATCAACACCCACAAGAAagag > 1:11292906/1‑35 (MQ=255) aTCATAAAACACTCATCAACACCCACAAGAAagag > 1:4436331/1‑35 (MQ=255) tCATAAAACACTCATCAACACCCACAAGAAAGAGc > 1:8620110/1‑35 (MQ=255) naTAAAACACTCATCAACACCCACAAGAAAGAGCt > 1:12087238/2‑35 (MQ=255) cATAAAACACTCATCAACACCCACAAGAAAGAGCt > 1:20077946/1‑35 (MQ=255) aTAAAACACTCATCAACACCCACAAGAAAGAGCTg > 1:18906917/1‑35 (MQ=255) aTAAAACACTCATCAACACCCACAAGAAAGAGCTg > 1:19754443/1‑35 (MQ=255) aTAAAACACTCATCAACACCCACAAGAAAGAGCTg > 1:7571999/1‑35 (MQ=255) aTAAAACACTCATCAACACCCACAAGAAAGAGCTg > 1:17213343/1‑35 (MQ=255) aTAAAACACTCATCAACACCCACAAGAAAGAGCTg > 1:17547734/1‑35 (MQ=255) aTAAAACACTCATCAACACCAACAAGAAAGAGCTg < 1:14557365/35‑1 (MQ=255) tAAAACACTCATCAACACCCACAAGAAAGAGCTGa > 1:16725119/1‑35 (MQ=255) aaaaCACTCATCAACACCCACAAGAAAGAGCTGAt > 1:4242333/1‑35 (MQ=255) aaaaCACTCATCAACACCCACAAGAAAGAGCTGAt > 1:8199640/1‑35 (MQ=255) aaaaCACTCATCAACACCCACAAGAAAGAGCTGAt > 1:19428421/1‑35 (MQ=255) aaaCACTCATCACCACCCACAAGAAAGAGCTGAtt < 1:3525064/35‑1 (MQ=255) aaaCACTCATCAACACCCACAAGAAAGAGCTGAtt > 1:12892712/1‑35 (MQ=255) aaaCACTCATCAACACCCACAAGAAAGAGCTGAtt > 1:1541154/1‑35 (MQ=255) accacTCATCACCACCCACAAGAAAGAGCTGATTg < 1:7628619/33‑1 (MQ=38) aaCCCTCATCACCACCCACAAGAAAGAGCTGATTg < 1:7108646/35‑1 (MQ=37) aaCACTCATCACCACCCACAAGAAAGAGCTGATTg < 1:14389668/35‑1 (MQ=255) aaCACTCATCACCACCCACAAGAAAGAGCTGATTg < 1:18000521/35‑1 (MQ=255) aaCACTCATCAACACCCACAAGAAAGAGCTGATTg > 1:13440561/1‑35 (MQ=255) aaCACTCATCAACACCCACAAGAAAGAGCTGATTg > 1:6196928/1‑35 (MQ=255) aaCACTCATCAACACCCACAAGAAAGAGCTGATTg > 1:16208683/1‑35 (MQ=255) acacTCATCAACACCCACAAGAAAGAGCTGATTGc > 1:15149338/1‑35 (MQ=255) acacTCATCAACACCCACAAGAAAGAGCTGATTGc > 1:13893190/1‑35 (MQ=255) acacTCATCAACACCCACAAGAAAGAGCTGATTGc > 1:12989136/1‑35 (MQ=255) cacTCATCAACACCCACAAGAAAGAGCTGATTGCa > 1:6666292/1‑35 (MQ=255) cacTCATCAACACCCACAAGAAAGAGCTGATTGCa > 1:15694467/1‑35 (MQ=255) cacTCATCAACACCCACAAGAAAGAGCTGATTGCa > 1:19678019/1‑35 (MQ=255) cacTCATCAACACCCACAAGAAAGAGCTGATTGCa > 1:4091879/1‑35 (MQ=255) cacTCATCAACACCCACAAGAAAGAGCTGATTGCa > 1:9729200/1‑35 (MQ=255) ccTCATCACCACCCACAAGAAAGAGCTGATTGCAg < 1:6275429/34‑1 (MQ=255) ccTCATCACCACCCACAAGAAAGAGCTGATTGCAg < 1:10055709/34‑1 (MQ=255) acTCATCAACACCCACAAGAAAGAGCTGATTGCAg > 1:1615784/1‑35 (MQ=255) cccaccaccacccACAAGAAAGAGCTGATTGCAGa < 1:3695243‑M2/22‑1 (MQ=255) cTCATCAACACCCACAAGAAAGAGCTGATTGCAGa > 1:8829127/1‑35 (MQ=255) tcatcaACACCCACAAGAAAGAGCTGATTGCAGaa > 1:11188723/1‑35 (MQ=255) tcatcaACACCCACAAGAAAGAGCTGATTGCAGaa > 1:3628435/1‑35 (MQ=255) tcatcaACACCCACAAGAAAGAGCTGATTGCAGaa > 1:15288846/1‑35 (MQ=255) tcaccaccacccACAAGAAAGGGCTGATTGCAGaa < 1:18460529‑M2/23‑1 (MQ=255) catcaccacccACAAGAAAGAGCTGATTGCAGAAg < 1:8542538‑M2/24‑1 (MQ=255) catcaACACCCACAAGAAAGAGCTGATTGCAGAAg > 1:9839440/1‑35 (MQ=255) atcaACACCCACAAGAAAGAGCTGATTGCAGAAGc > 1:11730460/1‑35 (MQ=255) accaccacccACAAGAAAGAGCTGATTGCAGAAGc < 1:5664325‑M2/25‑1 (MQ=255) accaccacccACAAGAAAGAGCTGATTGCAGAAGc < 1:16371269‑M2/25‑1 (MQ=255) tcaccacccACAAGAAAGAGCTGATTGCAGAAGCt < 1:10118614‑M2/26‑1 (MQ=255) tcaACACCCACAAGAAAGAGCTGATTGCAGAAGCt > 1:19533621/1‑35 (MQ=255) tcaACACCCACAAGAAAGAGCTGATTGCAGAAGCt > 1:15552815/1‑35 (MQ=255) ccaccgcccACAAGAAAGAGCTGATTGCAGAAGCt < 1:16485849‑M2/26‑1 (MQ=255) caccacccACAAGAAAGAGCTGATTGCAGAAGCTg < 1:12295169‑M2/27‑1 (MQ=255) caccacccACAAGAAAGAGCTGATTGCAGAAGCTg < 1:7390228‑M2/27‑1 (MQ=255) caccacccACAAGAAAGAGCTGATTGAAGAAGCTg < 1:17951218‑M2/27‑1 (MQ=255) caACACCCACAAGAAAGAGCTGATTGCAGAAGCTg > 1:17690919/1‑35 (MQ=255) caACACCCACAAGAAAGAGCTGATTGCAGAAGCTg > 1:7743436/1‑35 (MQ=255) accacccACAAGAAAGAGCTGATTGCAGAAGCTGc < 1:17400263‑M2/28‑1 (MQ=255) aaCACCCACAAGAAAGAGCTGATTGCAGAAGCTGc > 1:10641320/1‑35 (MQ=255) aaCACCCACAAGAAAGAGCTGATTGCAGAAGCTGc > 1:3214797/1‑35 (MQ=255) aaCACCCACAAGAAAGAGCTGATTGCAGAAGCTGc > 1:1268672/1‑35 (MQ=255) aaCACCCACAAGAAAGAGCTGATTGCAGAAGCTGc > 1:1476584/1‑35 (MQ=255) ccgcccACAAGAAGGAGCTGATTGCAGAAGCTGcc < 1:17145634/32‑1 (MQ=37) ccccccACAAGAAAGAGCTGATTGCAGAAGCTGcc < 1:6362212‑M2/29‑1 (MQ=255) ccacccACAAGAAAGAGCTGATTGCAGAAGCTGcc < 1:15895606‑M2/29‑1 (MQ=255) acacCCACAAGAAAGAGCTGATTGCAGAAGCTGcc > 1:15959200/1‑35 (MQ=255) acacCCACAAGAAAGAGCTGATTGCAGAAGCTGcc > 1:20576068/1‑35 (MQ=255) cacccACAAGAAAGAGCTGATTGCAGAAGCTGCCg > 1:4678642‑M2/6‑35 (MQ=255) acccACAAGAAAGAGCTGATTGCAGAAGCTGCCGt > 1:7148299‑M2/5‑35 (MQ=255) acccACAAGAAAGAGCTGATTGCAGAAGCTGCCGt > 1:18415485‑M2/5‑35 (MQ=255) acccACAAGAAAGAGCTGATTGCAGAAGCTGCCGt > 1:4965903‑M2/5‑35 (MQ=255) ccACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTa > 1:9917473‑M2/3‑35 (MQ=255) ccACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTa > 1:19168125‑M2/3‑35 (MQ=255) ccACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTa > 1:2264338‑M2/3‑35 (MQ=255) acaAGAAAGAGCTGATTGCAGAAGCTGCCGTTAGt > 1:19858907/1‑35 (MQ=255) | CCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAGT > REL606/2724099‑2724167 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |