New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3040639 | 97 (0.940) | 17 (0.220) | 5/36 | NT | 21.2% | coding (648/810 nt) | pppA | bifunctional prepilin leader peptidase/ methylase |
? | REL606 | 3224905 = | 54 (0.700) | coding (858/2517 nt) | yraJ | predicted outer membrane protein |
Only 100 of 192 total aligned reads displayed.
CAACGTTGGGCAGTGATAACGCCCCCACCCAGCCACCTAAAGCGGCGAAGAGTAATACATCGCCCATGC > REL606/3040605‑3040673 | cAACGTTGGGCAGTGATAACGCCCCCCCCCAGCCA < 1:8314193‑M1/35‑1 (MQ=255) cGTTGGGCAGTGATAACGCCCCCACCCAGCCACCt > 1:9676080/1‑35 (MQ=255) cGTTGGGCAGTGATAACGCCCCCACCCAGCCACCt > 1:10222368/1‑35 (MQ=255) cGTTGGGCAGTGATAACGCCCCCACCCAGCCACCt < 1:16069012/35‑1 (MQ=255) cGTTGGGCAGTGATAACGCCCCCACCCAGCCACCt < 1:11461406/35‑1 (MQ=255) gTTGGGCAGTGATAACGCCCCCACCCAGCCACCTa > 1:7197895/1‑35 (MQ=255) gTTGGGCAGTGATAACGCCCCCACCCAGCCACCTa < 1:4477007/35‑1 (MQ=255) gTTGGGCAGTGATAACGCCCCCACCCAGCCACCTa > 1:16846283/1‑35 (MQ=255) ttGGGCAGTGATAACGCCCCCACCCAGCCACCTaa < 1:9083449/35‑1 (MQ=255) tGGGCAGTGATAACGCCCCCACCCAGCCACCTaaa < 1:10657909/35‑1 (MQ=255) gggCAGCGATAACGCCCCCACCCAGCCACCTAAAg > 1:15038974/1‑35 (MQ=255) ggCAGTGATAACGCCCCCACCCAGCCACCTAAAgc < 1:4690714/35‑1 (MQ=255) ggaGTGATAACCCCCCCACCCAGCCACCTAAAgcg < 1:15235889/33‑1 (MQ=38) gCAGTGATAACGCCCCCACCCAGCCACCTAAAgcg > 1:6836959/1‑35 (MQ=255) gCAGTGATAACGCCCCCACCCAGCCACCTAAAgcg > 1:14139167/1‑35 (MQ=255) cAGTGATAACGCCCCCACCCAGCCACCTAAAgctg > 1:10349810/1‑33 (MQ=255) cAGTGATAACGCCCCCACCCAGCCACCTAAAgcgg > 1:5334558/1‑35 (MQ=255) cAGTGATAACGCCCCCACCCAGCCACCTAAAgcgg < 1:11916918/35‑1 (MQ=255) aGTGATAACGCCCCCACCCAGCCACCTAAAgcggc > 1:16583678/1‑35 (MQ=255) aGTGATAACGCCCCCACCCAGCCACCTAAAgcggc < 1:15138074/35‑1 (MQ=255) aGTGATAACGCCCCCACCCAGCCACCTAAAgcggc < 1:13513174/35‑1 (MQ=255) aGTGATAACGCCCCCACCCAGCCACCTAAAgcggc > 1:6279867/1‑35 (MQ=255) gTGATAACGCCCCCACCCAGCCACCTAAAgcggcg < 1:4102563/35‑1 (MQ=255) gTGATAACGCCCCCACCCAGCCACCTAAAgcggcg < 1:15690124/35‑1 (MQ=255) tGATAGCGCCCCCACCCAGCCACCTAAAGCGGCGa < 1:17336780/35‑1 (MQ=255) tGATAACGCCCCCACCCAGCCACCTAAAGCGGCGa < 1:6094578/35‑1 (MQ=255) tGATAACGCCCCCACCCAGCCACCTAAAGCGGCGa > 1:18519554/1‑35 (MQ=255) gATAACGCCCCCACCCAGCCACCTAAAGCGGCGaa < 1:15856065/35‑1 (MQ=255) aTAACGCCCCCACCCAGCCACCTAAAGCGGCGAag > 1:12649214/1‑35 (MQ=255) aTAACGCCCCCACCCAGCCACCTAAAGCGGCGAag > 1:14741136/1‑35 (MQ=255) tAACGCCCCCACCCAGCCACCTAAAGCGGCGAaga < 1:7490137/35‑1 (MQ=255) tAACGCCCCCACCCAGCCACCTAAAGCGGCGAaga < 1:7748822/35‑1 (MQ=255) tAACGCCCCCACCCAGCCACCTAAAGCGGCGAaga > 1:20448841/1‑35 (MQ=255) tAACGCCCCCACCCAGCCACCTAAAGCGGCGAaga < 1:20611712/35‑1 (MQ=255) aaCGCCCCCACCCAGCCACCTAAAGCGGCGAagag > 1:19771463/1‑35 (MQ=255) aaCGCCCCCACCCAGCCACCTAAAGCGGCGAagag < 1:4956757/35‑1 (MQ=255) aaCGCCCCCACCCAGCCACCTAAAGCGGCGAagag < 1:16305872/35‑1 (MQ=255) ccGCCCACACCCAGCCACCTAAAGCGGCGAAGAGt < 1:16348231/34‑1 (MQ=255) acccccccaccCAGCCAgcgcggatttgccccaac < 1:14210319‑M1/32‑19 (MQ=255) aCGCCCTCACCCAGCCACCTAAAGCGGCGAAGAGt > 1:12905412/1‑35 (MQ=255) aCGCCCCCACCCAGCCACCTAAAGCGGCGAagagc > 1:3329835/1‑34 (MQ=255) aCGCCCCCACCCAGCCACCTAAAGCGGCGAAGAGt > 1:2371598/1‑35 (MQ=255) aCGCCCCCACCCAGCCACCTAAAGCGGCGAAGAGt < 1:8238119/35‑1 (MQ=255) cccccccacCCAGCCAgcgcggatttgccccaacg < 1:19648944‑M1/33‑20 (MQ=255) cGCCCCCCCCCAGCCACCTAAAGCGGCGAAGAGTa < 1:1861955/35‑1 (MQ=255) cGCCCCCACCCAGACACCTAAAGCGGCGAAGAGTa < 1:12001333/35‑1 (MQ=255) gCCCCCACCCAGCCAgcgcggatttgccccaacgg < 1:10627634‑M1/35‑21 (MQ=255) gCCCCCACCCAGCCAgcgcggatttgccccaacgg < 1:5717603‑M1/35‑21 (MQ=255) ccccccaCCCAGCCAgcgcggatttgccccaacgg < 1:3703897‑M1/34‑21 (MQ=255) ccccccaCCCAGCCAgcgcggatttgccccaacgg < 1:17683028‑M1/34‑21 (MQ=255) ccccCCCCAGCCAgcgcggatttgccccaacggta < 1:4383169‑M1/35‑23 (MQ=255) ccccACCTAGCCACCTAAAGCGGCGAAGAGTAATa < 1:17497881/35‑1 (MQ=255) ccccACCCAGCCAgcgcggatttgccccaacggta < 1:17235531‑M1/35‑23 (MQ=255) ccccACCCAGCCAgcgcggatttgccccaacggta < 1:5633891‑M1/35‑23 (MQ=255) ccccACCCAGCCACCTAAAGCGGCGAAGAGTAATa < 1:19048868/35‑1 (MQ=255) ccccACCCAGCCACCTAAAGCGGCGAAGAGTAATa > 1:13027472/1‑35 (MQ=255) cccacccaGCCAgcgcggatttgccccaacggtac < 1:2481547‑M1/35‑24 (MQ=255) cccacccaGCCACCTAAAGCGGCGAAGAGTAATAc < 1:8402506/35‑1 (MQ=255) ccccccagccAgcgcggatttgccccaacggtacg < 1:579143‑M1/32‑25 (MQ=255) ccacccaGCCACCTAAAGCGGCGAAGAGTAATACa < 1:2921403/35‑1 (MQ=255) caacccagcCAgcgcggatttgccccaacggtaca < 1:550927‑M1/33‑25 (MQ=255) acccaGCCAgcgcggatttgccccaacggtacgcg < 1:19264190‑M1/35‑27 (MQ=255) acccaGCCAgcgcggatttgccccaacggtacgcg < 1:5540549‑M1/35‑27 (MQ=255) acccaGCCACCTAAAGCGGCGAAGAGTAATACATc < 1:8618416/35‑1 (MQ=255) acccaGCCACCTAAAGCGGCGAAGAGTAATACATc < 1:18981037/35‑1 (MQ=255) cccaGCCAgcgcggatttgccccaacggtacgcgg < 1:7806011‑M1/35‑28 (MQ=255) cccaGCCAgcgcggatttgccccaacggtacgcgg < 1:17943456‑M1/35‑28 (MQ=255) cccaGCCACCTAAAGCGGCGAAGAGTAATACATCg > 1:9353955/1‑35 (MQ=255) cccaGCCACCTAAAGCGGCGAAGAGTAATACATCg > 1:8206056/1‑35 (MQ=255) cccaGCCACCTAAAGCGGCGAAGAGTAATACATCg < 1:4966643/35‑1 (MQ=255) cccaGCCACCTAAAGCGGCGAAGAGTAATACATCg < 1:10955903/35‑1 (MQ=255) accagccagcggggatttgccccaacggtacgcgg < 1:7532043‑M1/34‑28 (MQ=255) ccaGCCACCTAAAGCTGCGAAGAGTAATACATCGc > 1:19449387/1‑35 (MQ=255) ccaGCCACCTAAAGCGGCGAAGAGTAATACATCGc > 1:10882918/1‑35 (MQ=255) ccaGCCACCTAAAGCGGCGAAGAGTAATACATCGc > 1:15996496/1‑35 (MQ=255) caGCCACCTAAAGCGGCGAAGAGTAATACATCGcc > 1:1374838/1‑35 (MQ=255) caGCCACCTAAAGCGGCGAAGAGTAATACATCGcc > 1:13915191/1‑35 (MQ=255) caGCCACCTAAAGCGGCGAAGAGTAATACATCGcc > 1:17729530/1‑35 (MQ=255) caGCCACCTAAAGCGGCGAAGAGTAATACATCGcc < 1:3786519/35‑1 (MQ=255) caGCCACCTAAAGCGGCGAAGAGTAATACATCGcc > 1:3742170/1‑35 (MQ=255) agccagcgcggatttgccccaacggtacgcggtat > 1:12301898‑M1/1‑5 (MQ=255) aGCCACCTAAAGCGGCGAAGAGTAATACATCGccc < 1:19894162/35‑1 (MQ=255) gccagcgcggatttgccccaacggtacgcggtatc < 1:11902399‑M1/35‑32 (MQ=255) gCCACCTAAAGCGGCGAAGAGTAATACATCGCCCa > 1:5907179/1‑35 (MQ=255) gCCACCTAAAGCGGCGAAGAGTAATACATCGCCCa < 1:15403046/35‑1 (MQ=255) ccagcgcggatttgccccaacggtacgcggtatcg < 1:3055189‑M1/35‑33 (MQ=255) ccagcgcggatttgccccaacggtacgcggtatcg < 1:13344123‑M1/35‑33 (MQ=255) ccagcgcggatttgccccaacggtacgcggtatcg < 1:10100476‑M1/35‑33 (MQ=255) ccACCTAAAGCGGCGAAGAGTAATACATCGCCCAt < 1:6389696/35‑1 (MQ=255) ccACCTAAAGCGGCGAAGAGTAATACATCGCCCAt > 1:3512478/1‑35 (MQ=255) ccACCTAAAGCGGCGAAGAGTAATACATCGCCCAt < 1:12478468/35‑1 (MQ=255) cagcgcggatttgccccaacggtacgcggtatcgc > 1:6660442‑M1/1‑2 (MQ=255) cagcgcggatttgccccaacggtacgcggtatcgc > 1:864839‑M1/1‑2 (MQ=255) cagcgcggatttgccccaacggtacgcggtatcgc > 1:12814112‑M1/1‑2 (MQ=255) cACCTAAAGCGGCGAAGAGTAATACATCGCCCATg < 1:18505853/35‑1 (MQ=255) agcgcggatttgccccaacggtacgcggtatcgca > 1:6168022‑M1/1‑1 (MQ=255) agcgcggatttgccccaacggtacgcggtatcgca > 1:8080059‑M1/1‑1 (MQ=255) agcgcggatttgccccaacggtacgcggtatcgca > 1:9875042‑M1/1‑1 (MQ=255) aCCTAAAGCGGCGAAGAGTAATACATCGCCCATGc > 1:17048823/1‑35 (MQ=255) aCCTAAAGCGGCGAAGAGTAATACATAGCCCATGc < 1:342021/35‑1 (MQ=255) | CAACGTTGGGCAGTGATAACGCCCCCACCCAGCCACCTAAAGCGGCGAAGAGTAATACATCGCCCATGC > REL606/3040605‑3040673 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |