New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1858460 | 47 (0.460) | 4 (0.050) | 4/40 | NT | 6.2% | intergenic (+227/+239) | insL‑4/yeaS | putative transposase insL for insertion sequence IS186/neutral amino‑acid efflux system |
? | REL606 | = 4005717 | 82 (0.960) | intergenic (+18/+265) | fre/fadA | NAD(P)H‑flavin reductase/acetyl‑CoA acetyltransferase |
GTTCCTTTATCAAGATGACGTTCGAATATGCCGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1858423‑1858460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggGGCGGGTTTTTTTATATCTCAGATAAATGCAAAC < REL606/4005717‑4005684 GTTCCTTTATCAAGATGACGTTCGAATATGCCGGC < 1:7741388/35‑1 GTTCCTTTATCAAGATGACGTTCGAATATGCCGGC > 1:18249430/1‑35 GTTCCTTTATCAAGATGACGTTCGAATATGCCGGC > 1:10828614/1‑35 GTTCCTTTATCAAGATGACGTTCGAATATGCCGGC > 1:16083766/1‑35 GTTCCTTTATCAAGATGACGTTCGAATATGCCGGC > 1:15966280/1‑35 GTTCCTTTATCAAGATGACGTTCGAATATGCCGGC < 1:4015765/35‑1 TTCCTTTATCAAGATGACGTTCGAATATGCGGGCA < 1:20319499/35‑1 TTCCTTTATCAAGATGACGTTCGAATATGCCGGCA < 1:1081075/35‑1 TTCCTTTATCAAGATGACGTTCGAATATGCCGGCA > 1:3973344/1‑35 TCCTTTATCAAGATGACGTTCGAATATGCCGGGAG > 1:19017604/1‑35 TCCTTTATCAAGATGACGTTCGAATATGCCGGCAG > 1:18100772/1‑35 TCCTTTATCAAGATGACGTTCGAATATGCCGGCAG < 1:17574822/35‑1 TCCTTTATCAAGATGACGTTCGAATATGCCGGCAG < 1:16669203/35‑1 TCCTTTATCAAGATGACGTTCGAATATGCCGGCAG > 1:20247981/1‑35 TCCTTTATCAAGATGACGTTCGAATATGCCGGCAG < 1:4887347/35‑1 TCCTTTATCAAGATGACGTTCGAATATGCCGGCAG > 1:9759183/1‑35 CCTTTATCAAGATGACGTTCGAATATGCCGGCAGG > 1:3907969/1‑35 CCTTTATCAAGATGACGTTCGAATATGCCGGCAGG > 1:12714775/1‑35 CCTTTATCAAGATGACGTTCGAATATGCCGGCAGG > 1:12272256/1‑35 CCTTTATCAAGATGACGTTCGAATATGCCGGCAGG < 1:5407566/35‑1 CTTTATCAAGATGACGTTCGAATATGCCGGCAGGG > 1:13105805/1‑35 CTTTATCAAGATGACGTTCGAATATGCCGGCAGGG > 1:20111443/1‑35 CTTTATCAAGATGACGTTCGAATATGCCGGCAGGG > 1:11634500/1‑35 CTTTATCAAGATGACGTTCGAATATGCCGGCAGGG > 1:6065362/1‑35 TTTATCAAGATGACGTTCGAATATGCCGGCAGGGG > 1:18622510/1‑35 TTTATCAAGATGACGTTCGAATATGCCGGCAGGGG > 1:10199156/1‑35 TATCAAGATGACGTTCGAATATGCCGGCAGGGGgg > 1:15109733/1‑33 TATCAAGATGACGTTCGAATATGCCGGCAGGGGgg > 1:1807498/1‑33 TCAAGATGACGTTCGAATATGCCGGCAGGGGGGGG > 1:16737928/1‑35 CAAGATGACGTTCGAATATGCCGGCAGGGGGGGGT > 1:16525653/1‑35 TGACGTTCGAATATGCCGGCAGGGGGGGGTTTTTT > 1:6784187/1‑35 GACGTTCGAATATGCCGGCAGGGGCGGGGTTTTTT > 1:3654293/1‑35 CAGGGGCGGGTTTTTTTATATCTCAGATAAATGCA < 1:10686218/35‑1 CAGGGGCGGGTTTTTTTATATCTCAGATAAATGCA < 1:19322201/35‑1 CAGGGGCGGGTTTTTTTATATCTCAGATAAATGCA < 1:19665124/35‑1 CAGGGGCGGGTTTTTTTATATCTCAGATAAATGCA < 1:707714/35‑1 CAGGGGCGGGTTTTTTTATATCTCAGATAAATGCA < 1:2842485/35‑1 CAGGGGCGGGGTTTTTTATATCTCAGATAAATGCA > 1:18181900/1‑35 AGGGGCGGGTTTTTTTATATCTCAGATAAATGCAA < 1:13930057/35‑1 AGGGGCGGGTTTTTTTATATCTCAGATAAATGCAA < 1:7857009/35‑1 AGGGGCGGGTTTTTTTATATCTCAGATAAATGCAA < 1:152013/35‑1 AGGGGCGGGTTTTTTTATATCTCAGATAAATGCAA < 1:8801755/35‑1 AGGGGCGGGTTTTTTTATATCTCAGATAAATGCAA < 1:17832562/35‑1 AGGGGCGGGGTTTTTTATATCTCAGATAAATGCAA > 1:10420658/1‑35 GGGGCGGGTTTTTTTATATCTCAGATAAATGCAAA < 1:10027135/35‑1 GGGGCGGGTTTTTTTATATCTCAGATAAATGCAAA < 1:6153528/35‑1 GGGGCGGGTTTTTTTATATCTCAGATAAATGCAAA < 1:1078738/35‑1 GGGCGGGTTTTTTTATATCTCAGATAAATGCAAAC < 1:460271/35‑1 GGGCGGGTTTTTTTATATCTCAGATAAATGCAAAC < 1:14188472/35‑1 GGGCGGGTTTTTTTATATCTCAGATAAATGCAAAC > 1:377462/1‑35 GGGCGGGTTTTTTTATATCTCAGATAAATGCAAAC > 1:2663106/1‑35 GGGCGGGTTTTTTTATATCTCAGATAAATGCAAAC < 1:16859067/35‑1 GGGCGGGTTTTTTTATATCTCAGATAAATGAAAAC < 1:4677017/35‑1 GGGCGGGTTTTTTTATATCACAGATAAATGCAAAC < 1:3809844/35‑1 GGGCGGGCTTTTTTATATCTCAGATAAATGCAAAC > 1:13915176/1‑35 GGGAGGGTTTTTTTATATCTCAGATAAATGCAAAC < 1:19926013/35‑1 GTTCCTTTATCAAGATGACGTTCGAATATGCCGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1858423‑1858460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggGGCGGGTTTTTTTATATCTCAGATAAATGCAAAC < REL606/4005717‑4005684 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |