New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 519489 = | 96 (0.930) | 12 (0.160) | 3/36 | NT | 16.6% | coding (644/1668 nt) | fdrA | membrane protein FdrA |
? | REL606 | 1815514 = | 49 (0.640) | coding (1030/1491 nt) | ynjC | fused transporter subunits of ABC superfamily: membrane components |
Only 100 of 109 total aligned reads displayed.
GCTATGGTTGCCCATTTTATTACCTGCTCTGCCACTGGTGGCGGGCCAGTACACGCTGGCGCTATGGCT > REL606/1815480‑1815548 | gCTATGGTTGCCCATTTTATTACCTGCTCTGCCAc > 1:5023911/1‑35 (MQ=255) gCTATGGTTGCCCATTTTATTACCTGCTCTGCCAc > 1:4523537/1‑35 (MQ=255) gCTATGGTTGCCCATTTTATTACCTGCTCTGCCAc > 1:2086456/1‑35 (MQ=255) gCTATGGTTGCCCATTTTATTACCTGCTCTGCCAc > 1:19493646/1‑35 (MQ=255) gCTATGGTTGCCCATTTTATTACCTGCTCTGCCAc > 1:1472524/1‑35 (MQ=255) cTATGGTTGCCCATTTTATTACCTGCTCTGCCACt > 1:20418251/1‑35 (MQ=255) cTATGGTTGCCCATTTTATTACCTGCTCTGCCACt > 1:15806300/1‑35 (MQ=255) cTATGGTTGCCCATTTCATTACCTGCTCTGCCACt > 1:1003815/1‑35 (MQ=255) tATGGTTGCCCATTTTATTACCTGCTCTGCCACtg > 1:17881399/1‑35 (MQ=255) tATGGTTGCCCATTTTATTACCTGCTCTGCCACtg > 1:9736922/1‑35 (MQ=255) tATGGTTGCCCATTTTATTACCTGCTCTGCCACtg > 1:12927826/1‑35 (MQ=255) aTGGTTGCCCATTTTATTACCTGCTCTGCCACtgg > 1:2826225/1‑35 (MQ=255) aTGGTTGCCCATTTTATTACCTGCTCTGCCACtgg > 1:7738342/1‑35 (MQ=255) aTGGTTGCCCATTTTATTACCTGCTCTGCCACtgg > 1:19891046/1‑35 (MQ=255) tGGTTGCCCATTTTATTACCTGCTCTGCCACtggt > 1:2951163/1‑35 (MQ=255) tGGTTGCCCATTTTATTACCTGCTCTGCCAAtggt > 1:694251/1‑35 (MQ=255) ggTTGCCCATTTTATTACCTGCTCTGCCACttgtg > 1:5301981/1‑35 (MQ=255) ggTTGCCCATTTTATTACCTGCTCTGCCACtggtg > 1:11233261/1‑35 (MQ=255) ggTTGCCCATTTTATTACCTGCTCTGCCACtggtg > 1:13651805/1‑35 (MQ=255) ggTTGCCCATTTTATTACCTGCTCTGCCACtggtg > 1:9409992/1‑35 (MQ=255) ggTTGCCCATTTTATTACCTGCTCTGCCACtggtg > 1:9881650/1‑35 (MQ=255) ggTTCCCCTTTTTATTCCCTCCCCTGCCACtggtg < 1:19814779/35‑1 (MQ=9) gTTTCCCATTTTATTACCTGCTCTGCCACtggtgg > 1:2755282/1‑35 (MQ=255) gTTGCCCATTTTATTCCCTGCTCTGCCACtggtgg < 1:1074027/35‑1 (MQ=255) gTTGCCCATTTTATTACCTGATCTGCCACtggggg > 1:177252/1‑35 (MQ=37) ttGCCCATTTTATTCCCTGCTCTGCCACTGGTGGc < 1:7615105/35‑1 (MQ=255) tGCCCATTTTATTACCTGCTCTGCCACTGGTGGCg > 1:16978527/1‑35 (MQ=255) tGCCCATTTTATTACCTGCTCTGCCACTGGTGGCg > 1:3112272/1‑35 (MQ=255) gCCCATTTTATTACCTGCTCTGCCACtggtgggcg > 1:54839/1‑32 (MQ=255) gCCCATTTTATTACCTGCTCTGCCACTGGTGGCgg > 1:8553572/1‑35 (MQ=255) gCCCATTTTATTACCTGCTCTGCCACTGGTGGCgg > 1:13754437/1‑35 (MQ=255) gCCCATTTTATTACCTGCTCTGCCACTGGTGGCgg > 1:12619178/1‑35 (MQ=255) gCCCATTTTATTACCTGCTCTGCCACTGGTGGCgg > 1:18178256/1‑35 (MQ=255) cccATTTTATTACCTGCTCTGCCACTGGTGGCggg > 1:14587138/1‑35 (MQ=255) cccATTTTATTACCTGCTCTGCCACTGGTGGCggg > 1:2728858/1‑35 (MQ=255) cccATTTTATTACCTGCTCTGCCACTGGTGGCggg > 1:4445757/1‑35 (MQ=255) ccATTTTATTACCTGCTCTGCCACTGGTGGCgggg > 1:4785878/1‑34 (MQ=255) ccATTTTATTACCTGCTCTGCCACTGGTGGCGGGc > 1:13364858/1‑35 (MQ=255) ccATTTTATTACCTGCTCTGCCACTGGTGGCGGGc > 1:7069281/1‑35 (MQ=255) cATTTTATTACCTGCTCTGCCACTGGTGGGggggc > 1:18933282/1‑33 (MQ=38) cATTTTATTACCTGCTCTGCCACTGGTGGGggggc > 1:18176599/1‑33 (MQ=38) cATTTTATTACCTGCTCTGCCACTGGTGGCggggc > 1:5406149/1‑33 (MQ=255) cATTTTATTACCTGCTCTGCCACTGGTGGCGGGcc > 1:10563889/1‑35 (MQ=255) aTTTTATTACCTGCTCTGCCACTGTTGGCGGGCCa > 1:15075465/1‑35 (MQ=255) aTTTTATTACCTGCTCTGCCACTGGTGGGGGGGCa > 1:18835379/1‑35 (MQ=37) aTTTTATTACCTGCTCTGCCACTGGTGGCGGGccc > 1:8933986/1‑34 (MQ=255) ttttATTCCCTGCTCTGCCACTGGTGGCGGGCCAg < 1:19451615/35‑1 (MQ=255) ttttATTACCTGCTCTGCCACTGGTGGCGGGcgcg > 1:6692699/1‑32 (MQ=255) ttttATTACCTGCTCTGCCACTGGTGGCGGGGCac > 1:5547500/1‑34 (MQ=255) tttATTACCTGCTCTGCCACTGGTGGCGGGcccgg > 1:4024605/1‑32 (MQ=255) ttattcCCCGCCCTGCCACTGGTGGCGGGCCAGTa < 1:4392549/35‑1 (MQ=25) ttattaCCTGCTCTGCCACTGGTGGCGGGGCAgga > 1:18446046/1‑33 (MQ=38) ttattaCCTGCTCTGCCACTGGTGGCGGGCCAGTa > 1:14250015/1‑35 (MQ=255) tattaCCTGCTCTGCCACTGGTGGCGGGGCCGTac > 1:12072257/1‑35 (MQ=37) ttcccctcccctgccaCTGGTGGCGGGCCAGTaca < 1:19209625‑M2/19‑1 (MQ=255) ttccctgccctgccaCTGGTGGCGGGCCAGTacac < 1:8889608‑M2/20‑1 (MQ=255) ttccctcccctgccaCTGGTGGCGGGCCAGTacac < 1:6138717‑M2/20‑1 (MQ=255) ttaCCTGCTCTGCCACTGGTGGCGGGGCAGTacac > 1:9374055/1‑35 (MQ=255) ttaCCTGCTCTGCCACTGGTGGCGGGCCAGTaaac > 1:13663209/1‑35 (MQ=255) ttaCCTGCTCTGACACTGGTGGCGGGCCAGTacac < 1:12394480/35‑1 (MQ=255) tccctcccctgccaCTGGTGGCGGGCCAGTACACg < 1:1683536‑M2/21‑1 (MQ=255) tcccgcccctgccaCTGGTGGCGGGCCAGTACACg < 1:14122665‑M2/21‑1 (MQ=255) taCCTGCTCTGCCACTGGTGGCGGGGCAGTACACg > 1:13277015/1‑35 (MQ=255) ccctgccctgccaCTGGTGGCGGGCCAGTACACGc < 1:5324515‑M2/22‑1 (MQ=255) ccctcccctgccaCTGGTGGCGGGCCAGTACACGc < 1:4864983‑M2/22‑1 (MQ=255) ccctcccctgccaCTGGTGGCGGGCCAGTACACGc < 1:17949951‑M2/22‑1 (MQ=255) cccgcccctgccaCTGGTGGCGGGCCAGTACACGc < 1:13665456‑M2/22‑1 (MQ=255) cccgcccctgccaCTGGTGGCGGGCCAGTACACGc < 1:11872984‑M2/22‑1 (MQ=255) cccccccctgccaCTGGTGGCGGGCCAGTACACGc < 1:933670‑M2/22‑1 (MQ=255) aCCTGCTCTGCCACTGGTGGCGGGCCAGGACACGc > 1:4230439/1‑35 (MQ=255) cccgCTCTGCCACTGGTGGCGGGCCAGTACACGCt < 1:12010780/32‑1 (MQ=255) ccTGCTCTGCCACTGGTGGCGGGGCAGGACACGCt > 1:5254508/1‑35 (MQ=37) ccTGCTCTGCCACTGGTGGCGGGCCCGTACACGCt > 1:9013930/1‑35 (MQ=255) ctgccctgccaCTGGTGGCGGGCCAGTACACGCTg < 1:11848086‑M2/24‑1 (MQ=255) ctcccctgccaCTGGTGGCGGGCCAGTACACGCTg < 1:9262874‑M2/24‑1 (MQ=255) cgcccctgccaCTGGTGGCGGGCCAGTACACGCTg < 1:1027255‑M2/24‑1 (MQ=255) cgcccctgccaCTGGTGGCGGGCCAGTACACGCTg < 1:5344929‑M2/24‑1 (MQ=255) tGCTCTGCCACTGGTGGCGGGCCAGTACACGCTgg > 1:13537620/1‑35 (MQ=255) cccctgccaCTGGTGGCGGGCCAGTACACGCTGgc < 1:14986054‑M2/26‑1 (MQ=255) ccctgccaCTGGTGGCGGGCCAGTACACGCTGgcg < 1:11866047‑M2/27‑1 (MQ=255) ccctgccaCTGGTGGCGGGCCAGTACACGCTGgcg < 1:10500668‑M2/27‑1 (MQ=255) ctgccaCTGGTGGCGGGGCAGTACACGCTGGCGCt > 1:16334997‑M2/7‑35 (MQ=255) ctgccaCTGGTGGCGGGCCAGTACACGCTGGCGCt < 1:7553831‑M2/29‑1 (MQ=255) ctgccaCTGGTGGCGGGCAAGTACACGCTGGCGCt < 1:2629762‑M2/29‑1 (MQ=255) tgccaCTGGTGGCGGGCCAGTACACGCTGGGGCTa > 1:13374867‑M2/6‑35 (MQ=255) tgccaCTGGTGGCGGGCCAGTACACGCTGGCGCTa < 1:9815536‑M2/30‑1 (MQ=255) tgccaCTGGTGGCGGGCCAGTACACGCTGGCGCTa < 1:5264440‑M2/30‑1 (MQ=255) gccaCTGGTGGCGGGCCAGTACACGCTGGCGCTAt < 1:8034135‑M2/31‑1 (MQ=255) ccaCTGGTGGCGGGCCAGTACACGCTGGCGCTATg < 1:14336194‑M2/32‑1 (MQ=255) ccaCTGGTGGCGGGCCAGTACACGCTGGCGCTATg < 1:19351313‑M2/32‑1 (MQ=255) caaCTGGTGGCGGGCCAGTACACGCTGGCGCTATg < 1:15413413‑M2/32‑1 (MQ=255) caCTGGTGGCGGGCCAGTACACGCTGGCGCTATgg < 1:7488593‑M2/33‑1 (MQ=255) caCTGGTGGCGGGCCAGTACACGCTGGCGCTATgg < 1:5366340‑M2/33‑1 (MQ=255) caCTGGTGGCGGGCCAGTACACGCTGGCGCTATgg < 1:6209626‑M2/33‑1 (MQ=255) caCTGGTGGCGGACCAGTACACGCTGGCGCTATgg < 1:538586‑M2/33‑1 (MQ=255) cACTGGTGGCGTGCCAGTACACGCTGGGGCTATgg > 1:12735002/1‑35 (MQ=37) aCTGGTGGCGGGCCAGTACACGCTGGCGCTATGGc < 1:7658618‑M2/34‑1 (MQ=255) aCTGGTGGCGGGCCAGTACACGCTGGCGCTATGGc < 1:5089823‑M2/34‑1 (MQ=255) cTGGTGGCGGGCCAGTACACGCTGGGGGTATGGCt > 1:18117300/1‑35 (MQ=37) cTGGTGGCGGGCCAGTACACGCTGGCGCTATgggt > 1:2355413/1‑33 (MQ=255) | GCTATGGTTGCCCATTTTATTACCTGCTCTGCCACTGGTGGCGGGCCAGTACACGCTGGCGCTATGGCT > REL606/1815480‑1815548 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |