New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3016826 = | 44 (0.430) | 12 (0.160) | 5/36 | NT | 14.8% | coding (561/741 nt) | ECB_02817 | KpsU protein |
? | REL606 | 3882315 = | 105 (1.360) | coding (103/816 nt) | atpB | F0F1 ATP synthase subunit A |
TGATTCTGCCTGCTCCTGCATGGACTCCGGTAACTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3016865‑3016826 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgGGGGGTTTTGTGGATCCACCAGCGAGAATGTA > REL606/3882315‑3882346 TGATTCTGCCTGCTCCTGCATGGACTCCTGTAACT > 1:1341152/1‑35 TGATTCTGCCTGCTCCTGCATGGACTCCGGTAACT < 1:8868164/35‑1 TGATTCTGCCTGCTCCTGCATGGACTCCGGTAACT > 1:3767589/1‑35 TGATTCTGCCTGCTCCTGCATGGACTCCGGTAACT > 1:8415053/1‑35 tcTTCTGCCTGCTCCTGCATGGACTCCGGTAACTG < 1:6218001/33‑1 GATTCTGCCTGCTCCTGCATGGACTCCGGTAACTG > 1:2498887/1‑35 GATTCTGCCTGCTCCTGCATGGACTCCGGTAACTG > 1:20539161/1‑35 GATTCTGCCTGCTCCTGCATGGACTCCGGTAACTG < 1:6506907/35‑1 GATTCTGCCTGCTCCTGCATGGACTCCGGTAACTG > 1:121791/1‑35 GATTCTGCCTGCTCCTGCATGGACTCCGGTAACTG < 1:11928731/35‑1 GATTCTGCCTGCTCCTGCATGGACTCCGGTAACTG > 1:7414619/1‑35 GATTCTGCCTGCTCCTGCATGGACTCAGGTAACTG < 1:10094466/35‑1 GATTCTGCATGCTCCTGCATGGACTCCGGTAACTG < 1:3914933/35‑1 ATTCTGCCTGCTCCTGCATGGACTCCGGTAACTGG < 1:18630600/35‑1 ATTCTGCCTGCTCCTGCATGGACTCCGGTAACTGG < 1:12431121/35‑1 ATTCTGCCTGCTCCTGCATGGACTCCGGTAACTGG < 1:16969160/35‑1 ATTCTGCCTGCTCCTGCATGGACTCCGGTAACTGG < 1:1609335/35‑1 ATTCTGCCTGCTCCTGCATGGACTCCGGTAACTGG > 1:16576841/1‑35 ATTCTGCCTGCTCCTGCATGGACTCCGGTAACTGG > 1:16965817/1‑35 TTCTGCCTGGTCCTGCATGGACTCCGGTAACTGGC < 1:7949870/35‑1 TTCTGCCTGCTCCTGCATGGACTCCGGTAACTGGC < 1:2253900/35‑1 TTCTGCCTGCTCCTGCATGGACTCCGGTAACTGGC > 1:4261414/1‑35 TTCTGCCTGCTCCTGCATGGACTCCGGTAACTGGC < 1:3073/35‑1 TCTGCCTGCTCCTGCATGGACTCCGGTAACTGGCT < 1:334640/35‑1 TCTGCCTGCTCCTGCATGGACTCCGGTAACTGGCT > 1:10721811/1‑35 TCTGCCTGCTCCTGCATGGACTCCGGTAACTGGCT > 1:17673310/1‑35 TCTGCCTGCTCCTGCATGGACTCCGGTAACTGGCT > 1:13486497/1‑35 TCTGCCTGCTCCTGCATGGACTCCGGTAACTGGCT < 1:2572915/35‑1 CTGCCTGCTCCTGCATGGACTCCGGTAACTGGCTG > 1:16607291/1‑35 TGCCTGCTCCTGCATGGACTCCTGTAACTGGCTGG > 1:15103180/1‑35 TGCCTGCTCCTGCATGGACTCCGGTAACTGGCTGG > 1:4133008/1‑35 TGCCTGCTCCTGCATGGACTCCGGTAACTGGCTGG > 1:2013881/1‑35 GCCTGCTCCTGCATGGACTCCGGTAACTGGCTGGG > 1:14761317/1‑35 CCTGCTCCTGCATGGACTCCGGTAACTGGCTGGGG > 1:5647560/1‑35 CTGCTCCTGCATGGACTCCGGTAACTGGCTGGGGG > 1:12400399/1‑35 CTGCTCCTGCATGGACTCCGGTAACTGGCTGGGGG > 1:1728341/1‑35 CTGCTCCTGCATGGACTCCGGTAACTGGCTGGGGG > 1:1466420/1‑35 TGCTCCTGCATGGACTCCGGTAACTGGCTGGGGGG > 1:10157847/1‑35 GCTCCTGCATGGACTCCGGTAACTGGCTGGGGGGT > 1:6961041/1‑35 CTCCTGCATGGACTCCGGTAACTGGCTGGGGGTTT > 1:18900140/1‑35 CTCCTGCATGGACTCCGGTAACTGGCTGGGGGGTT > 1:3061332/1‑35 CTCCTGCATGGACTCCGGTAACTGGCTGGGGGGTT > 1:7055214/1‑35 TCCTGCATTGACTCCGGTAACTGGCTGGGGGGTTg > 1:6856697/1‑34 TCCTGCATGGACTCCGGTAACTGGCTGGGGGGTTg > 1:10053933/1‑34 TCCTGCATGGACTCCGGTAACTGGCTGGGGGGTTT > 1:11174834/1‑35 CCTGCATGGACTCCGGTAACTGGCTGGGGGGTTgt > 1:8148853/1‑33 CCTGCATGGACTCCGGTAACTGGCTGGGGGGTTTg > 1:3711806/1‑34 CCTGCATGGACTCCGGTAACTGGCTGGGGGGTTTT > 1:6475693/1‑35 CTGCATGGACTCCGGTAACTGGCTGGGGGGTTgta > 1:3104288/1‑32 CTGCATGGACTCCGGTAACTGGCTGGGGGGTTGTG > 1:19055405/1‑35 TGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAAT > 1:1982484/1‑35 TGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAAT < 1:11692488/35‑1 TGGCTGGGGGGTTTTGTGGATCAACCAGCGAGAAT < 1:6431257/35‑1 GGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATG < 1:17195532/35‑1 GGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATG < 1:7434918/35‑1 GGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATG < 1:12896502/35‑1 GCTGGGGGGTTTTGTGGATCCACCAGTGAGAATGT > 1:12737131/1‑35 GCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGT > 1:8530939/1‑35 GCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGT < 1:11632022/35‑1 GCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGT > 1:12798440/1‑35 GCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGT > 1:20329303/1‑35 CTGGGGGGTTTTGTGGATCCATCAGCGAGAATGTA > 1:13145248/1‑35 CTGGGGGGTTTTGTGGATCCACCCGCGAGAATGTA > 1:18909907/1‑35 CTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTA > 1:12829738/1‑35 CTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTA < 1:12883888/35‑1 CTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTA > 1:18029413/1‑35 CTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTA < 1:18519260/35‑1 CTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTA < 1:10925614/35‑1 CTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTA < 1:9085420/35‑1 TGATTCTGCCTGCTCCTGCATGGACTCCGGTAACTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3016865‑3016826 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgGGGGGTTTTGTGGATCCACCAGCGAGAATGTA > REL606/3882315‑3882346 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |