New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2288961 = | 52 (0.510) | 12 (0.140) | 4/40 | NT | 19.0% | coding (1909/3753 nt) | yfaL | adhesin |
? | REL606 | = 3625456 | 59 (0.690) | pseudogene (7/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
Only 100 of 110 total aligned reads displayed.
AGTGCGCCCCACTGCGTGTCTACCCCCGCATCAACTGCCACTTCACCGTCGGCGCGCATTTCAATATCA > REL606/2288927‑2288995 | aGTGCGCCCCACTGCGTGTCTACCCCCGCATCAAc > 1:10247998/1‑35 (MQ=255) aGTGCGCCCCACTGCGTGTCTACCCCCGCATCAAc > 1:19355335/1‑35 (MQ=255) aGTGCGCCCCACTGCGTGTCTACCCCCGCATCAAc > 1:18105635/1‑35 (MQ=255) aGTGCGCCCCACTGCGTGTCTACCCCCGCATCAAc > 1:10861424/1‑35 (MQ=255) aGTGCCCCCCACTGCGTGTCTACCCCCGCATCAAc < 1:10096507/35‑1 (MQ=255) gTGCGCCCCCCTGCGTGTCTACCCCCGCATCAACt < 1:10747097/35‑1 (MQ=255) gTGCGCCCCCCTGCGTGTCTACCCCCGCATCAACt < 1:15261635/35‑1 (MQ=255) gTGCGCCCCACTGCGTGTCTACCCCCGCATCAACt < 1:14568708/35‑1 (MQ=255) tGCGCCCCACTGCGTGTCTACCCCCGCATCAACTg > 1:8979831/1‑35 (MQ=255) tGCGCCCCACTGCGTGTCTACCCCCGCATCAACTg > 1:17933106/1‑35 (MQ=255) gcgcCCCCCTGCGTGTCTACCCCCGCATAAACTGc < 1:18693404/35‑1 (MQ=255) gcgcCCCACTGCGTGTCTACCCCCGCATCAACTGc > 1:5519424/1‑35 (MQ=255) gcgcCCCACTGCGTGTCTACCCCCGCATCAACTGc < 1:8340584/35‑1 (MQ=255) gcgcCCCACTGCGTGTCTACCCCCGCATCAACTGc > 1:6226609/1‑35 (MQ=255) cccccccCCTGCGTGTCTCCCCCAGCATCAACTGc < 1:11307165/32‑1 (MQ=19) acgcCCCACTGCGTGTCTACCCCCGCATCAACTGc > 1:11860386/2‑35 (MQ=255) cgcCCCACTGCGTGTCTACCCCCGCATCAACTGcc > 1:3403018/1‑35 (MQ=255) cgcCCCACTGCGTGTCTACCCCCGCATCAACAGcg > 1:11485900/1‑34 (MQ=255) gcCCCACTGCGTGTCTACCCCCGCATCAACTGCCa > 1:12178908/1‑35 (MQ=255) gcCCCACTGCGTGTCTACCCCCGCATCAACTGCCa > 1:8894730/1‑35 (MQ=255) gcCCCACTGCGTGTCTACCCCCGCATCAACTGCCa > 1:753082/1‑35 (MQ=255) ccccACTGCGTGTCTACCCCCGCATCAACTGCCAc > 1:18622709/1‑35 (MQ=255) ccccACTGCGTGTCTACCCCCGCATCAACTGCCAc > 1:5223743/1‑35 (MQ=255) cccACTGCGTGTCTACCCCCGCATCAACTGCCACt > 1:11216345/1‑35 (MQ=255) ccACTGCGTGTCTACCCCCGCATCAACTGCCACtt > 1:19428466/1‑35 (MQ=255) ccACTGCGTGTCTACCCCCGCATCAACTGCCACtt > 1:16047421/1‑35 (MQ=255) cACTGCGTGTCTACCCCCGCATCAACTGCTACTTc > 1:429166/1‑35 (MQ=255) cACTGCGTGTCTACCCCCGCATCAACTGCCACTTc > 1:2171696/1‑35 (MQ=255) aCTGCGTGTCTACCCCCGCATCAACTGCCACTTCa > 1:2704608/1‑35 (MQ=255) aCTGCGTGTCTACCCCCGCATCAACTGCCACTTCa > 1:11747780/1‑35 (MQ=255) tGCGTGTCTACCCCCGCATCAACTGCCACTTCAcc > 1:341049/1‑35 (MQ=255) tGCGTGTCTACCCCCGCATCAACTGCCACTTCAcc > 1:4936381/1‑35 (MQ=255) gCGTGTCTACCCCCGCATCAACTGCCACTTCACCg > 1:11513132/1‑35 (MQ=255) gCGTGTCTACCCCCGCATCAACTGCCACTTCACCg > 1:4166447/1‑35 (MQ=255) gCGTGTCTACCCCCGCATCAACTGCCACTTCACCg > 1:12335973/1‑35 (MQ=255) cGTGTCTCCCCCCGCATCAACTGCAACTTCACCGt < 1:12184305/35‑1 (MQ=37) cGTGTCTACCCCCGCATCAACTGCCACTTCACCGt > 1:14784604/1‑35 (MQ=255) cGTGTCTACCCCCGCATCAACTGCCACTTCACCGt > 1:5933187/1‑35 (MQ=255) cGTGTCTACCCCCGCATCAACTGCCACTTCACCGt > 1:19810655/1‑35 (MQ=255) gtgtCTACCCCCGCATCAACTGCCACTTCACCGta > 1:8533696/1‑34 (MQ=255) gtgtCTACCCCCGCATCAACTGCCACTTCACCGTc > 1:4166286/1‑35 (MQ=255) gtgtCTACCCCCGCATCAACTGCCACTTCACCGTc > 1:2724465/1‑35 (MQ=255) tgtCTACCCCCGCATCAACTGCCACTTCACCGTCg > 1:5152135/1‑35 (MQ=255) tgtCTACCCCCGCATCAACTGCCACTTCACCGTCg > 1:3772071/1‑35 (MQ=255) tgtCTACCCCCGCATCAACTGCCACTTCACCGTCg > 1:13078813/1‑35 (MQ=255) tgtCTACCCCCGCATCAACTGCCACTTCACCGTCg > 1:19399790/1‑35 (MQ=255) tgtCTACCCCCGCATCAACTGCCACTTCACCGCCg > 1:20334821/1‑35 (MQ=255) gtCTACCCCCGCATCAACTGCCACTTCACCGTCgg > 1:12071262/1‑35 (MQ=255) gtCTACCCCCGCATCAACTGCCACTTCACCGTCgg > 1:16005886/1‑35 (MQ=255) tCTACCCCCGCATCAACTGCCACTTCACCGTCGgc > 1:19197567/1‑35 (MQ=255) cTACCCCCGCATCAACTGCCACTTCACCGTCGgcg > 1:11836412/1‑35 (MQ=255) cTACCCCCGCATCAACTGCCACTTCACCGTCGgcg > 1:10335636/1‑35 (MQ=255) cTACCCCCGCATCAACTGCCACTTCACCGTCGgcg > 1:16499935/1‑35 (MQ=255) tACCCCCGCATCAACTGCCACTTCACCGTCGgcgc > 1:19111892/1‑35 (MQ=255) aCCCCAGCATCAACTGCCACTTCACCGTCGgcgcg > 1:1390075/1‑35 (MQ=255) cccccGCATCAACTGCCGCTTCACCGTCGgcgcgc > 1:2348573/1‑35 (MQ=255) cccccccccccCTGCCACTTCACCGTCGGCGCGCa > 1:2731959‑M1/12‑35 (MQ=255) ccccGCATCAACTGCCACTTCACCGTCGGCGCCCa > 1:4151111/1‑35 (MQ=255) ccccccccccCTGCCACTTCACCGTCGGCGCGCAt > 1:7168522‑M1/11‑35 (MQ=255) ccccccccccCTGCCACTTCACCGTCGGCGCGCAt > 1:10836935‑M1/11‑35 (MQ=255) ccccccccccCTGCCACTTCACCGTCGGCGCGCAt > 1:3450120‑M1/11‑35 (MQ=255) ccccccccccCTGCCACTTCACCGTCGGCGCGCAt > 1:19013933‑M1/11‑35 (MQ=255) cccGCATCAACTGCCACTTCACCGTCGGCGCGCAt > 1:16498757/1‑35 (MQ=255) ccgccccccCTGCCACTTCACCGTCGGCGCGCAtt > 1:6275178‑M1/10‑35 (MQ=255) ccGCATCAACTGCCACTTCACCGTCGGCGCGCCtt > 1:6537332/1‑35 (MQ=255) ccGCATCAACTGCCACTTCACCGTCGGCGCGCAtt > 1:20105233/1‑35 (MQ=255) ccGCATCAACTGCCACTTCACCGTCGGCGCGCAtt > 1:13524622/1‑35 (MQ=255) ccccccccCTGCCACTTCACCGTCGGCGCGCAttt > 1:3463329‑M1/9‑35 (MQ=255) ccccccccCTGCCACTTCACCGTCGGCGCGCAttt > 1:12921888‑M1/9‑35 (MQ=255) gCATCAACTGCCACTTCACCGTCGGCGCGCATTTc > 1:6251843/1‑35 (MQ=255) gCATCAACTGCCACTTCACCGTCGGCGCGCATTTc > 1:1277008/1‑35 (MQ=255) gCATCAACTGCCACTTCACCGTCGGCGCGCATTTc > 1:1559058/1‑35 (MQ=255) gCATCAACTGCCACTTCACCGTCGGCGCGCATTTc > 1:17612498/1‑35 (MQ=255) cccccccCTGCCACTTCACCGTCGGCGCGCATTTc > 1:12664443‑M1/8‑35 (MQ=255) ccccccCTGCCACTTCACCGTCGGCGCGCATTTCa > 1:10303060‑M1/7‑35 (MQ=255) ccccccCTGCCACTTCACCGTCGGCGCGCATTTCa > 1:19346849‑M1/7‑35 (MQ=255) cATCAACTGCCACTTCACCGTCGGCGCGCATTTCa > 1:4779516/1‑35 (MQ=255) cccccCTGCCACTTCACCGTCGGCGCGCATTTCaa > 1:15449872‑M1/6‑35 (MQ=255) cccccCTGCCACTTCACCGTCGGCGCGCATTTCaa > 1:13638740‑M1/6‑35 (MQ=255) cccccCTGCCACTTCACCGTCGGCGCGCATTTCaa > 1:8417468‑M1/6‑35 (MQ=255) cccccCTGCCACTTCACCGTCGGCGCGCATTTCaa > 1:8634771‑M1/6‑35 (MQ=255) aTCAACTGCCACTTCACCGTCGGCGCGCCTTTCaa > 1:13171844/1‑35 (MQ=255) aTCAACTGCCACTTCACCGTCGGCGCGCATTTCaa > 1:10162721/1‑35 (MQ=255) aTCAACTGCCACTTCACCGTCGGCGCGCATTTCaa > 1:4659952/1‑35 (MQ=255) tCAACTGCCACTTCACCGTCGGCGCGCATTTCAat > 1:8763689/1‑35 (MQ=255) tCAACTGCCACTTCACCGTCGGCGCGCATTTCAat > 1:3926526/1‑35 (MQ=255) ccccCTGCCACTTCACCGTCGGCGCGCATTTCAat > 1:20425662‑M1/5‑35 (MQ=255) ccccCTGCCACTTCACCGTCGGCGCGCATTTCAat > 1:3709337‑M1/5‑35 (MQ=255) ccccCTGCCACTTCACCGTCGGCGCGCATTTCAat > 1:18378869‑M1/5‑35 (MQ=255) cccCTGCCACTTCACCGTCGGCGCGCATTTCAata > 1:10809731‑M1/4‑35 (MQ=255) cccCTGCCACTTCACCGTCGGCGCGCATTTCAata > 1:6222435‑M1/4‑35 (MQ=255) cAACTGCCACTTCACCGTCGGCGCGCATTTCAata > 1:15488732/1‑35 (MQ=255) ccCTGCCACTTCACCGTCGGCGCGCATTTCAatat > 1:15323672‑M1/3‑35 (MQ=255) aaCTGCCACTTCACCGTCGGCGCGCATTTCAatat > 1:16909619/1‑35 (MQ=255) aaCTGCCACTTCACCGTCGGCGCGCATTTCAatat > 1:7249661/1‑35 (MQ=255) aaCTGCCACTTCACCGTCGGCGCGCATTTCAatat > 1:3468823/1‑35 (MQ=255) cCTGCCACTTCACCGTCGGCGCGCATTTCAATATc > 1:4516450‑M1/2‑35 (MQ=255) aCTGCCACTTCACCGTCGGCGCGCATTTCAATATc > 1:6261401/1‑35 (MQ=255) CTGCCACTTCACCGTCGGCGCGCATTTCAATATCa > 1:10679106‑M1/1‑35 (MQ=255) CTGCAACTTCACCGTCGGCGCGCATTTCAATATCa > 1:6768052‑M1/1‑35 (MQ=255) | AGTGCGCCCCACTGCGTGTCTACCCCCGCATCAACTGCCACTTCACCGTCGGCGCGCATTTCAATATCA > REL606/2288927‑2288995 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |