New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 312869 = | 100 (0.970) | 13 (0.150) | 6/40 | NT | 13.5% | coding (56/951 nt) | yahI | predicted carbamate kinase‑like protein |
? | REL606 | 4351443 = | 83 (0.970) | intergenic (+51/‑87) | groEL/yjeI | chaperonin GroEL/hypothetical protein |
TTTCACCGCCTCCGCCTGATGCTCAATCGACTGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/312906‑312869 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGA > REL606/4351443‑4351476 TTTCACCGCCTCCGCCTGATGCTCAATCGACTGGC > 1:5467892/1‑35 TTCACCGCCTCCGCCTGATGCTCAATCGACTGGCT > 1:20533452/1‑35 TTCACCGCCTCCGCCTGATGCTCAATCGACTGGCT > 1:2080002/1‑35 TTCACCGCCTCCGCCTGATGCTCAATCGACTGGCT > 1:4688636/1‑35 TTCACCGCCTCCGCCTGATGCTCAATCGACTGGCT > 1:13971382/1‑35 TTCACCGCCTCCGCCTGATGCTCAATCGACTGGCT > 1:5588196/1‑35 cccCCGCCTCCGCCTGATGCTCAATCGACTGGCTG < 1:1478514/32‑1 cccCCGCCTCCGCCTGATGCTCAATCGACTGGCTG < 1:15975938/32‑1 cccCCGCCTCCGCCTGATGCTCAATCGACTGGCTG < 1:3170196/32‑1 TCACCGCCTCCGCCTGATGCTCAATCGACTGGCTG > 1:479461/1‑35 TCACCGCCTCCGCCTGATGCTCAATCGACTGGCTG > 1:16971663/1‑35 TCACCGCCTCCGCCTGATGCTCAATCGACTGGCTG > 1:9685754/1‑35 TCACCGCCTCCGCCTGATGCTCAATCGACTGGATG > 1:14645042/1‑35 ccCCGCCTCCGCCTGATGCTCAATCGACTGGCTGG < 1:13167774/33‑1 ccCCGCCTCCGCCTGATGCTCAATCGACTGGCTGG < 1:8915560/33‑1 CACCGCCTCCGCCTGATGCTCAATCGACTGGCTGG > 1:6595998/1‑35 CACCGCCTCCGCCTGATGCTCAATCGACTGGCTGG > 1:2757921/1‑35 CACCGCCTCCGCCTGATGCTCAATCGACTGGCTGG > 1:10564140/1‑35 ACCGCCTCCGCCTGATGCTCAATCGACTGGCTGGG > 1:18224127/1‑35 ACCGCCTCCGCCTGATGCTCAATCGACTGGCTGGG > 1:17627538/1‑35 ACCGCCTCCGCCTGATGCTCAATCGACTGGCTGGG > 1:1079149/1‑35 CGCCTCCGCCTGATGCTCAATCGACTGGCTGGGGG > 1:2324386/1‑35 CGCCTCCGCCTGATGCTCAATCGACTGGCTGGGGG > 1:5882290/1‑35 GCCTCCGCCTGATGCTCAATCGACTGGCTGGGGGT > 1:1979475/1‑35 GCCTCCGCCTGATGCTCAATCGACTGGCTGGGGGT > 1:4612409/1‑35 CTCCGCCTGATGCTCAATCGACTGGCTGGGGTTTT > 1:10763399/1‑35 CTCCGCCTGATGCTCAATCGACTGGCTGGGGGTTT > 1:6734916/1‑35 CTCCGCCTGATGCTCAATCGACTGGCTGGGGGTTT > 1:7393671/1‑35 CTCCGCCTGATGCTCAATCGACTGGCTGGGGGTTT > 1:10751977/1‑35 TCCGCCTGATGCTCAATCGACTGGCTGGGGGTATT > 1:3744699/1‑35 TCCGCCTGATGCTCAACCGACTGGCTGGGGGTTTT > 1:3792629/1‑35 CCGCCTGATGCTCAATCGACTGGCTGGGGGTTTct > 1:9149837/1‑33 CCGCCTGATGCTCAATCGACTGGCTGGGGGTATTT > 1:3685957/1‑35 CGCCTGATGCTCAATCGACTGGCTGGGGGTTTTTt > 1:18555106/1‑34 CCTGATGCTCAATCGACTGGCTGGGGGTTTTTTTT > 1:14517769/1‑35 CTGATGCTCAATCGACTGGCTGGGGGTTTTTTTTT > 1:2470959/1‑35 CTGATGCTCAATCGACTGGCTGGGGGTTTTTTTTT > 1:7372449/1‑35 TGATGCTCAATCGACTGGCTGGGGGTTTTTTTTTT > 1:8693631/1‑35 GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGA > 1:1344165/1‑35 GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGA > 1:14595200/1‑35 GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGA > 1:4410676/1‑35 GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGA < 1:3626134/35‑1 GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGA < 1:20532346/35‑1 TTTCACCGCCTCCGCCTGATGCTCAATCGACTGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/312906‑312869 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGA > REL606/4351443‑4351476 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |