New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3625460 | 64 (0.620) | 22 (0.260) | 7/40 | NT | 30.7% | pseudogene (3/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
? | REL606 | = 3992020 | 46 (0.540) | coding (141/510 nt) | ECB_03720 | conserved hypothetical protein |
Only 100 of 138 total aligned reads displayed.
TAGGGAAGGCACTTGCACCGGGATCCGTTTCAATGGCAGTTGCTGGAAAATCAGCGGCATTAATCATCA > REL606/3991986‑3992054 | tAGGGAAGGCACTTGCACCGGGATCCGTTTCAATg < 1:4101307/35‑1 (MQ=255) tAGGGAAGGCACTTGCACCGGGATCCGTTTCAATg > 1:2197746/1‑35 (MQ=255) tAGGGAAGGCACTTGCACCGGGATCCGTTTCAATg > 1:1833019/1‑35 (MQ=255) aGGGAAGGCACTTGCACCGGGATCCGTTTCAATGg < 1:15521541‑M2/35‑2 (MQ=255) aGGGAAGGCACTTGCACCGGGATCCGTTTCAATGg > 1:13467677‑M2/1‑34 (MQ=255) aGGGAAGGCACTTGCACCGGGATCCGTTTCAATGg < 1:2842419‑M2/35‑2 (MQ=255) aGGGAAGGCACTTGCACCGGGATCCGTTTCAATGg > 1:11312685‑M2/1‑34 (MQ=255) aGGGAAGGCACTTGCACCGGGATCCGTTTCAATGg > 1:19098239‑M2/1‑34 (MQ=255) aGGGAAGGCACTTGCACCGGGATCCGTTTCAATGg < 1:18805687‑M2/35‑2 (MQ=255) gggAAGGCACTTGCACCGGGATCCGTTTCAATGgg > 1:27020‑M2/1‑33 (MQ=255) gggAAGGCACTTGCACCGGGATCCGTTTCAATGgc < 1:16314315‑M2/35‑3 (MQ=255) gggAAGGCACTTGCACCGGGATCCGTTTCAATGgc > 1:5233909‑M2/1‑33 (MQ=255) gggAAGGCACTTGCACCGGGATCCGTTTCAATGgc < 1:10293208‑M2/35‑3 (MQ=255) gggAAGGCACTTGCACCGGGATCCGTTTCAATGgc < 1:8333603‑M2/35‑3 (MQ=255) gggAAGGCACTTGCACCGGGATCCGTTTCAATGgc > 1:17648561‑M2/1‑33 (MQ=255) ggAAGGCACTTGCACCGGGATCCGTTTCAATGgca > 1:951964‑M2/1‑32 (MQ=255) ggAAGGCACTTGCACCGGGATCCGTTTCAATGgca > 1:13384080‑M2/1‑32 (MQ=255) ggAAGGCACTTGCACCGGGATCCGTTTCAATGgca > 1:10116050‑M2/1‑32 (MQ=255) gAAGGCACTTGCACCGGGATCCGTTTCAATGgcag > 1:7237249‑M2/1‑31 (MQ=255) gAAGGCACTTGCACCGGGATCCGTTTCAATGgcag > 1:17163340‑M2/1‑31 (MQ=255) gAAGGCACTTGCACCGGGATCCGTTTCAATGgcag < 1:7052560‑M2/35‑5 (MQ=255) gAAGGCACTTGCACCGGGATCCGTTTCAATGgcag > 1:15374690‑M2/1‑31 (MQ=255) aaGGCACTTGCACCGGGATCCGTTTCAATGgcagg < 1:6349489‑M2/35‑6 (MQ=255) aaGGCACTTGCACCGGGATCCGTTTCAATGgcagg < 1:10238596‑M2/35‑6 (MQ=255) aaGGCACTTGCACCGGGATCCGTTTCAATGgcagg < 1:161849‑M2/35‑6 (MQ=255) aaGGCACTTGCACCGGGATCCGTTTCAATGGCAGt < 1:6782167/35‑1 (MQ=255) aaGGCACTTGCACCGGGATCCGTTTCAATGGCAGt < 1:4034035/35‑1 (MQ=255) aaGGCACTTGCACCGGGATCCGTTTCAATGGCAGt < 1:7389718/35‑1 (MQ=255) aGGCACTTGCACCGGGATCCGTTTCAATGgcaggg < 1:104660‑M2/35‑7 (MQ=255) aGGCACTTGCACCGGGATCCGTTTCAATGgcaggg < 1:13326347‑M2/35‑7 (MQ=255) ggCACTTGCACCGGGATCCGTTTCAATGgcagggg < 1:18666712‑M2/35‑8 (MQ=255) ggCACTTGCACCGGGATCCGTTTCAATGgcagggg < 1:17840025‑M2/35‑8 (MQ=255) gCACTTGCACCGGGATCCGTTTCAATGGCAGTTGc < 1:5680946/35‑1 (MQ=255) gCACTTGCACCGGGATCCGTTTCAATGGCAGTTGc < 1:11492200/35‑1 (MQ=255) cACTTGCACCGGGATCCGTTTCAATGgcagggggg < 1:10130357‑M2/35‑10 (MQ=255) cACTTGCACCGGGATCCGTTTCAATGgcagggggg < 1:376980‑M2/35‑10 (MQ=255) cACTTGCACCGGGATCCGTTTCAATGgcagggggg < 1:15353296‑M2/35‑10 (MQ=255) cACTTGCACCGGGATCCGTTTCAATGGCAGTTGCt < 1:8956040/35‑1 (MQ=255) cACTTGCACCGGGATCCGTTTCAATGGCAGTTGCt < 1:2835023/35‑1 (MQ=255) cACTTGCAACGGGATCCGTTTCAATGGCAGTTGCt < 1:13482273/35‑1 (MQ=255) aCTTGCACCGGGATCCGTTTCAATGgcaggggggg < 1:13869767‑M2/35‑11 (MQ=255) aCTTGCACCGGGATCCGTTTCAATGgcaggggggg < 1:19351283‑M2/35‑11 (MQ=255) aCTTGCACCGGGATCCGTTTCAATGGCAGTTGCTg < 1:17341556/35‑1 (MQ=255) aCTTGCACCGGGATCCGTTTCAATGGCAGTTGCTg < 1:9350709/35‑1 (MQ=255) cTTGCACCGGGATCCGTTTCAATGgcagggggggg < 1:7222412‑M2/35‑12 (MQ=255) ttGCACCGGGATCCGTTTCAATGgcaggggggggg < 1:5069608‑M2/35‑13 (MQ=255) ttGCACCGGGATCCGTTTCAATGgcaggggggggg < 1:17371525‑M2/35‑13 (MQ=255) ttGCACCGGGATCCGTTTCAATGGCAGTTGCTGGa < 1:8474150/35‑1 (MQ=255) tGCACCGGGATCCGTTTCAATGgcagggggggcgg < 1:13469155‑M2/35‑14 (MQ=255) tGCACCGGGATCCGTTTCAATGGCAGTTGCTGGaa < 1:19198817/35‑1 (MQ=255) cACCGGGATCCGTTTCAATGgcagggggggggggg < 1:9634289‑M2/35‑16 (MQ=255) cACCGGGATCCGTTTCAATGgcagggggggggggg < 1:7546485‑M2/35‑16 (MQ=255) cACCGGGATCCGTTTCAATGgcagggggggggggg < 1:10625689‑M2/35‑16 (MQ=255) cACCGGGATCCGTTTCAATGgcaggggggggggga < 1:11425242‑M2/35‑16 (MQ=255) cACCGGGATCCGTTTCAATGGCAGTTGCTGGaaaa < 1:15497190/35‑1 (MQ=255) cACCGGGATCCGTTTCAATGGCAGTTGCTGGaaaa < 1:17758106/35‑1 (MQ=255) cACCGGGATCCGTTTCAATGGCAGTTGCTGGaaaa < 1:16728951/35‑1 (MQ=255) aCCGGGATCCGTTTCAATGgcaggggggggggggt < 1:6293306‑M2/35‑17 (MQ=255) aCCGGGATCCGTTTCAATGgcaggggggggggggg < 1:1995988‑M2/35‑17 (MQ=255) aCCGGGATCCGTTTCAATGGCAGTTGCTGGAAAAt < 1:12588586/35‑1 (MQ=255) ccGGGATCCGTTTCAATGgcaggggggggggggag < 1:1308403‑M2/35‑18 (MQ=255) cGGGATCCGTTTCAATGgcaggggggggggggagg < 1:8674388‑M2/35‑19 (MQ=255) cGGGATCCGTTTCAATGGCAGTTGCTGGAAAATCa < 1:17755449/35‑1 (MQ=255) cGGGATCCGTTTCAATGGCAGTTGCTGGAAAATCa < 1:14422140/35‑1 (MQ=255) cGGGATCCGTTTCAATGGCAGTTGCTGGAAAATCa < 1:938227/35‑1 (MQ=255) cGGGATCCGTTTCAATGGCAGTTGCTGGAAAATCa < 1:12291116/35‑1 (MQ=255) gggATCCGTTTCAATGgcaggggggggggggaggg < 1:16997067‑M2/35‑20 (MQ=255) ggATCCGTTTCAATGGCAGTTGCTGGAAAATCAGc < 1:4867813/35‑1 (MQ=255) ggATCCGTTTCAATGGCAGTTGCTGGAAAATCAGc < 1:5593516/35‑1 (MQ=255) gATCCGTTTCAATGGCAGTTGCTGGAAAATCAGCg < 1:6463799/35‑1 (MQ=255) gATCCGTTTCAATGGCAGTTGCTGGAAAATCAGCg < 1:1909655/35‑1 (MQ=255) aTCCGTTTCAATGGCAGTTGCTGGAAAATCAGCgg < 1:7450825/35‑1 (MQ=255) tCCGTTTCAATGGCAGTTGCTGGAAAATCAGCGGc < 1:5545258/35‑1 (MQ=255) ccGTTTCAATGGCAGTTGCTGGAAAATCAGCGGCa < 1:13878588/35‑1 (MQ=255) ccGTTTCAATGGCAGTTGCTGGAAAATCAGCGGCa < 1:20600067/35‑1 (MQ=255) cGTTTCAATTGCAGTTGCTGGAAAATCAGCGGCAt > 1:3028093/1‑35 (MQ=255) cGTTTCAATGGCAGTTGCTGGAAAATCAGCGGCAt < 1:17851315/35‑1 (MQ=255) cGTTTCAATGGCAGTTGCTGGAAAATCAGCGGCAt < 1:3459153/35‑1 (MQ=255) cGTTTCAATGGCAGTTGCTGGAAAATCAGCGGCAt < 1:661237/35‑1 (MQ=255) gTTTCAATGGCAGTTGCTGGAAAATCAGCGGCAtt < 1:9964089/35‑1 (MQ=255) gTTTCAATGGCAGTTGCTGGAAAATCAGCGGCAtt < 1:3697692/35‑1 (MQ=255) gTTTAAATGGCAGTTGCTGGAAAATCAGCGGCAtt < 1:153829/35‑1 (MQ=255) tttCAATGGCAGTTGCTGGAAAATCAGCGGCATTa < 1:198373/35‑1 (MQ=255) tttCAATGGCAGTTGCTGGAAAATCAGCGGCATTa < 1:14242259/35‑1 (MQ=255) tttCAATGGCAGTTGCTGGAAAATCAGCGGCATTa < 1:16036751/35‑1 (MQ=255) ttCAATGGCAGTTGCTGGAAAATCAGCGGCATTaa < 1:10255288/35‑1 (MQ=255) ttCAATGGCAGTTGCTGGAAAATCAGCGGCATTaa < 1:2492303/35‑1 (MQ=255) ttCAATGGCAGTTGCTGGAAAATCAGCGGCATTaa < 1:9052371/35‑1 (MQ=255) tCAATGGCAGTTGCTGGAAAATCAGCGGCATTAat < 1:9671700/35‑1 (MQ=255) cAATGGCAGTTGCTGGAAAATCAGCGGCATTAatc < 1:13457662/35‑1 (MQ=255) cAATGGCAGTTGCTGGAAAATCAGCGGCATTAatc < 1:19347996/35‑1 (MQ=255) cAATGGCAGTTGCTGGAAAATCAGCGGCATTAatc < 1:8969439/35‑1 (MQ=255) aaTGGCAGTTGCTGGAAAATCAGCGGCATTAatca < 1:6032171/35‑1 (MQ=255) aTGGCAGTTGCTGGAAAATCAGCGGCATTAatcat < 1:19643908/35‑1 (MQ=255) aTGGCAGTTGCTGGAAAATCAGCGGCATTAatcat < 1:9894879/35‑1 (MQ=255) aTGGCAGTTGCTGGAAAATCAGCGGCATTAatcat < 1:10133825/35‑1 (MQ=255) tGGCAGTTGCTGGAAAATCAGCGGCATTAatcatc < 1:19516321/35‑1 (MQ=255) ggCAGTTGCTGGAAAATCAGCGGCATTAAtcatca < 1:8858201/35‑1 (MQ=255) ggCAGTTGCTGGAAAATCAGCGGCATTAAtcatca < 1:4521582/35‑1 (MQ=255) ggCAGTTGCTGGAAAATCAGCGGCATTAAtaatca < 1:8383656/35‑1 (MQ=255) | TAGGGAAGGCACTTGCACCGGGATCCGTTTCAATGGCAGTTGCTGGAAAATCAGCGGCATTAATCATCA > REL606/3991986‑3992054 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |