Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 1,462,320 | IS150 (–) +3 bp | 90.4% | intergenic (‑82/‑257) | mokB ← / → trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 664688 = | NA (NA) | 66 (0.700) | 36/44 | NT | 89.1% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 1462320 = | 7 (0.090) | intergenic (‑82/‑259) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor | |||||
* | ? | REL606 | = 666130 | NA (NA) | 66 (0.640) | 36/48 | NT | 89.2% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 1462322 | 7 (0.080) | intergenic (‑84/‑257) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
TTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666101‑666130 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTGAGACTTTCTGTTTTCAGGCTAACCGGGAA < REL606/1462322‑1462289 TTAACTGTCCAACTTTTTGGGGTCAGTACAGCCTG > 1:17364076/1‑35 TTAACTGTCCAACTTTTTGGGGTCAGTACAGCCTG < 1:6902482/35‑1 TAACTGTCCAACTTTTTGGGGTCAGTACAGCCTGA > 1:8012463/1‑35 AACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAG > 1:1751684/1‑35 AACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAG < 1:15124280/35‑1 AACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAG > 1:2796319/1‑35 AACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAG < 1:12983181/35‑1 AACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAG > 1:8950097/1‑35 ACTGTCCAACTTTTTGGGGTCAGTACAGCCTGtac > 1:18323231/1‑32 ACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGA > 1:16114634/1‑35 ACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGA > 1:6249850/1‑35 ACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGA < 1:13492575/35‑1 CTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGAC > 1:4789864/1‑35 CTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGAC > 1:4622464/1‑35 CTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGAC > 1:17137129/1‑35 CTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGAC > 1:10549262/1‑35 TGTCCAACTTTTTGGGGTCAGTACAGCCTGAGACT < 1:19517273/35‑1 GTCCAACTTTTTGGGGTCAGTACAGCCTGAGACTT > 1:4429264/1‑35 TCCAACTTTTTGGGGTCAGTACAGCCTGAGACTTT > 1:1089536/1‑35 CCAACTTTTTGGGGTCAGTACAGCCTGAGACTTTC > 1:18254823/1‑35 CAACTTTTTGGGGTCAGTACAGCCTGAGACTTTCT < 1:8122445/35‑1 CAACTTTTTGGGGTCAGTACAGCCTGAGACTTTCT > 1:2620828/1‑35 AACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTG < 1:3622905/35‑1 AACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTG > 1:7470145/1‑35 AACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTG < 1:6698964/35‑1 AACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTG > 1:10256600/1‑35 AACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTG < 1:1039226/35‑1 ACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTGT < 1:19015016/35‑1 ACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTGT > 1:9433495/1‑35 ACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTGT > 1:7262022/1‑35 CTTTTTTGGGTCAGTACAGCCTGAGACTTTCTGTT > 1:1900911/1‑35 CTTTTTGGGGTCAGTACAGCCTGAGACTTTCTGTT > 1:4304577/1‑35 CTTTTTGGGGTAAGTACAGCCTGAGACTTTCTGTT < 1:11380815/35‑1 TTTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTT > 1:15740983/1‑35 TTTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTT > 1:7034549/1‑35 TTTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTT > 1:18420636/1‑35 TTTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTT > 1:7659166/1‑35 TTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTTT > 1:11853964/1‑35 TTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTTT > 1:582742/1‑35 TTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTTT > 1:13670207/1‑35 TTTGGGGTCAGTACAGCCTGAGACTTTCTGTTTTC < 1:10923099/35‑1 TTTGGGGTCAGTACAGCCTGAGACTTTCTGTTTTC > 1:7584787/1‑35 TTTGGGGTCAGTACAGCCTGAGACTTTCTGTTTTC < 1:4007113/35‑1 TTGGGGTCAGTCCAGCCTGAGACTTTCTGTTTTCA < 1:20105891/35‑1 TTGGGGTCAGTACAGCCTGAGACTTTCTGTTTTCA > 1:20447827/1‑35 TTGGGGTCAGTACAGCCTGAGACTTTCTGTTTTCA < 1:5620567/35‑1 TTGGGGTCAGTACAGCCTGAGACTTTCTGTTTTCA > 1:1392625/1‑35 TGGGGTCAGTCCAGCCTGAGACTTTCTGTTTTCAG < 1:10586241/35‑1 TGGGGTCAGTACAGCCTGAGACTTTCTGTTTTCAG < 1:8587080/35‑1 GGGGTCAGTACAGCCTGAGACTTTCTGTTTTCAGG < 1:7989826/35‑1 GGGTCAGTACAGCCTGAGACTTTCTGTTTTCAGGC > 1:15212178/1‑35 GGGTCAGTACAGCCTGAGACTTTCTGTTTTCAGGC > 1:1582814/1‑35 GGGTCAGTACAGCCTGAGACTTTCTGTTTTCAGGC < 1:12248921/35‑1 GGTCAGTACAGCCTGAGACTTTCTGTTTTCAGGCT < 1:12100877/35‑1 GGTCAGTACAGCCTGAGACTTTCTGTTTTCAGGCT > 1:13641923/1‑35 GGTCAGTACAGCCTGAGACTTTCTGTTTTCAGGCT < 1:8321794/35‑1 GTCAGTACAGCCTGAGACTTTCTGTTTTTAGGCTA > 1:512217/1‑35 GTCAGTACAGCCTGAGACTTTCTGTTTTCAGGCTA > 1:4809770/1‑35 GTCAGTACAGCCTGAGACTTTCTGTTTTCAGGCTA > 1:4829149/1‑35 TCAGTACAGCCTGAGACTTTCTGTTTTCAGGCTAA < 1:3111534/35‑1 TCAGTACAGCCTGAGACTTTCTGTTTTCAGGCTAA > 1:5798230/1‑35 TCAGTACAGCCTGAGACTTTCTGGTTTCAGGCTAA > 1:17514435/1‑35 CAGTCCAGCCTGAGACTTTCTGTTTTCAGGCTAAC < 1:9088450/35‑1 CAGTCCAGCCTGAGACTTTCTGTTTTCAGGCTAAC < 1:17947399/35‑1 CAGTACAGCCTGAGACTTTCTGTTTTCAGTCTAAC > 1:5030234/1‑35 CAGTACAGCCTGAGACTTTCTGTTTTCAGGCTAAC < 1:9128899/35‑1 CAGTACAGCCTGAGACTTTCTGTTTTCAGGCTAAC > 1:5397104/1‑35 atTACAGCCTGAGACTTTCTGTTTTCAGGCTAACC < 1:15965247/33‑1 AGTCCAGCCTGAGACTTTCTGTTTTCAGGCTAACC < 1:18869807/35‑1 AGTCCAGCCTGAGACTTTCTGTTTTCAGGCTAACC < 1:2870121/35‑1 TACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGG > 1:1151050/1‑35 TACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGG < 1:19392253/35‑1 TACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGG > 1:13659137/1‑35 ACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGG > 1:1576143/1‑35 ACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGG < 1:3527717/35‑1 ACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGG > 1:16783535/1‑35 ACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGG < 1:2334417/35‑1 CAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGGA < 1:9499400/35‑1 CAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGGA < 1:19785828/35‑1 CAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGGA < 1:14278990/35‑1 CAGCCTGAGACTTTCTGTTTCCAGGCTAACCGGGA > 1:16876393/1‑35 AGCCTGAGACTTTCTGTTTTCAGGCTAACCGGGAA > 1:12042593/1‑35 TTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666101‑666130 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTGAGACTTTCTGTTTTCAGGCTAACCGGGAA < REL606/1462322‑1462289 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |