New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 657260 | 81 (0.790) | 7 (0.090) | 5/38 | NT | 8.3% | coding (108/2583 nt) | leuS | leucyl‑tRNA synthetase |
? | REL606 | = 1387545 | 90 (1.110) | coding (247/966 nt) | ycjG | L‑Ala‑D/L‑Glu epimerase |
Only 100 of 195 total aligned reads displayed.
AGGGCTGACACGGGAGGAGTTGCAAAAAATTCTCCCTGCCGGCGCAGCACGTAATGCGCTGGATTGTGC > REL606/1387511‑1387579 | aGGGCTGACACGGGAGGAGTTGCAAAAAATTCTcc < 1:19343828/35‑1 (MQ=255) gggCTGACACGGGAGGAGTTGCAAAAAATTCTCCc < 1:15175959‑M2/35‑2 (MQ=255) ggCTGACACGGGAGGAGTTGCAAAAAATTCTCCct < 1:20576913‑M2/35‑3 (MQ=255) ggCTGACACGGGAGGAGTTGCAAAAAATTCTCCct < 1:1760563‑M2/35‑3 (MQ=255) ggCTGACACGGGAGGAGTTGCAAAAAATTCCCCct < 1:1171998‑M2/35‑3 (MQ=255) gCTGACACGGGAGGAGTTGCAAAAAATTCTCCctg < 1:3088808‑M2/35‑4 (MQ=255) gCTGACACGGGAGGAGTTGCAAAAAATTCTCCctg > 1:8184974‑M2/1‑32 (MQ=255) cTGACACGGGAGGAGTTGCAAAAAATTCTCCctgc > 1:3650383‑M2/1‑31 (MQ=255) cTGACACGGGAGGAGTTGCAAAAAATTCTCCctgc < 1:15005318‑M2/35‑5 (MQ=255) cTGACACGGGAGGAGTTGCAAAAAATTCTCCctga < 1:18775573‑M2/35‑5 (MQ=255) tGACACGGGAGGGGTTGCAAAAAATTCTCCctgcc < 1:9346379‑M2/35‑6 (MQ=255) tGACACGGGAGGAGTTGCAAAAAATTCTCCctgcc > 1:12315962‑M2/1‑30 (MQ=255) gACACGGGAGGAGTTGCAAAAAATTCTCCCTGCCg < 1:5212298/35‑1 (MQ=255) gACACGGGAGGAGTTGCAAAAAATTCTCCCTGCCg > 1:12127134/1‑35 (MQ=255) gACACGGGAGGAGTTGCAAAAAATTCTCCCTGCCg < 1:1565672/35‑1 (MQ=255) gACACGGGAGGAGTTGCAAAAAATTCTCCCTGCCg > 1:18955321/1‑35 (MQ=255) gACACGGGAGGAGTTGCAAAAAATTCTCCATGCCg < 1:1703709/35‑1 (MQ=255) acacGGGAGGAGTTGCAAAAAATTCTCCCTGCCgg > 1:15759915/1‑35 (MQ=255) acacGGGAGGAGTTGCAAAAAATTCTCCCTGCCgg < 1:31729/35‑1 (MQ=255) cacGGGAGGAGTTGCAAAAAATTCTCCCTGCCGgc > 1:11035143/1‑35 (MQ=255) cacGGGAGGAGTTGCAAAAAATTCTCCCTGCCGgc > 1:19585708/1‑35 (MQ=255) cacGGGAGGAGTTGCAAAAAATTCTCCCTGCCGgc > 1:15951966/1‑35 (MQ=255) cacGGGAGGAGTTGCAAAAAATTCTCCCTGCCGgc > 1:6481217/1‑35 (MQ=255) acGGGAGGAGTTGCAAAAAATTCTCCCTGCCGgcg < 1:2431230/35‑1 (MQ=255) acGGGAGGAGTTGCAAAAAATTCTCCCTGCCGgcg < 1:4055234/35‑1 (MQ=255) cGGGAGGAGTTGCAAAAAATTCTCCCTGCCGgcgc > 1:18651108/1‑35 (MQ=255) cGGGAGGAGTTGCAAAAAATTCTCCCTGCCGgcgc > 1:16003126/1‑35 (MQ=255) ggaggaGTTGCAAAAAATTCTCCCTGCCGGCgcag < 1:20074797/35‑1 (MQ=255) ggaggaGTTGCAAAAAATCCTCCCTGCCGGCgcag > 1:4511381/1‑35 (MQ=255) gaggagTTGCAAAAAATTCTCCCTGCCGGCgcagc > 1:4978793/1‑35 (MQ=255) gaggagTTGCAAAAAATTCTCCCTGCCGGCgcagc < 1:5938218/35‑1 (MQ=255) gaggagTTGCAAAAAATTCTCCCTGCCGGCgcagc < 1:16739009/35‑1 (MQ=255) aggagTTGCAAAAAATTCTCCCTGCCGGCgcagca > 1:10943526/1‑35 (MQ=255) aggagTTGCAAAAAATTCTCCCTGCCGGCgcagca < 1:7431969/35‑1 (MQ=255) aggagTTGCAAAAAATTCTCCCTGCCGGCgcagca > 1:17637905/1‑35 (MQ=255) ggagTTGCAAAAAATTCTCCCTGCCGGCGCAGCAc < 1:4769574/35‑1 (MQ=255) ggagTTGCAAAAAATTCTCCCTGCCGGCGCAGCAc > 1:14263886/1‑35 (MQ=255) ggagTTGCAAAAAATTCTCCCTGCCGGCGCAGCAc < 1:7130507/35‑1 (MQ=255) gagTTGCAAAAAATTCTCCCTGCCGGCGCAGCACg > 1:10428067/1‑35 (MQ=255) gagTTGCAAAAAATTCTCCCTGCCGGCGCAGCACg < 1:1457831/35‑1 (MQ=255) gagTTGCAAAAAATTCTCCCTGCCGGCGCAGCACg < 1:2601705/35‑1 (MQ=255) gagTTGCAAAAAATTCTCCCTGCCGGCGCAGCACg > 1:7573180/1‑35 (MQ=255) agTTGCAAAAAATTCTCCCTGCCGGCGCAGCACGt > 1:17862029/1‑35 (MQ=255) agTTGCAAAAAATTCTCCCTGCCGGCGCAGCACGt < 1:13262109/35‑1 (MQ=255) gTTGCAAAAAATTCTCCCTGCCGGCGCAGCACGTa < 1:10184976/35‑1 (MQ=255) gTTGCAAAAAATTCTCCCTGCCGGCGCAGCACGTa > 1:9304235/1‑35 (MQ=255) gTTGCAAAAAATTCTCCCTGCCGGCGCAGAACGTa > 1:91581/1‑35 (MQ=255) ttGCAAAAAATTCTCCCTGCCGGCGCAGCACGTaa < 1:17717884/35‑1 (MQ=255) ttGCAAAAAATTCTCCCTGCCGGCGCAGCACGTaa < 1:9369753/35‑1 (MQ=255) tGCAAAAAATTCTCCCTGCCGGCGCAGCACGTAAt < 1:10122454/35‑1 (MQ=255) gCAAAAAATTCTCCCTGCCGGCGCAGCACGTAATg > 1:15552321/1‑35 (MQ=255) gCAAAAAATTCTCCCTGCCGGCGCAGCACGTAATg < 1:1970574/35‑1 (MQ=255) gCAAAAAATTCTCCCTGCCGGCGCAGCACGTAATg > 1:16213820/1‑35 (MQ=255) gCAAAAAATTCTCCCTGCCGGCGCAGCACGTAATg > 1:2653833/1‑35 (MQ=255) cAAAAAATTCTCCCTGCCGGCGCAGCACGTAATgc < 1:10663553/35‑1 (MQ=255) aaaaaaTTCTCCGTGCCGGCGCAGCACGTAATgcg < 1:1378761/35‑1 (MQ=255) aaaaaaTTCTCCCTGCCGGCGCAGCACGTAATgcg > 1:10137868/1‑35 (MQ=255) aaaaaaTTCTCCCTGCCGGCGCAGCACGTAATgcg > 1:14736768/1‑35 (MQ=255) aaaaaaTTCTCCCTGCCGGCGCAGCACGTAATgcg > 1:18475419/1‑35 (MQ=255) aaaaaaTTCTCCCTGCCGGCGCAGCACGTAATgcg < 1:12262262/35‑1 (MQ=255) aaaaaTTCTCCCTGCCGGCGCAGCACGTAATgcgc < 1:20261016/35‑1 (MQ=255) aaaaaTTCTCCCTGCCGGCGCAGCACGTAATgcgc < 1:5615778/35‑1 (MQ=255) aaaaaTTCTCCCTGCCGGCGCAGCAAGTAATgcgc < 1:3425489/35‑1 (MQ=255) aaaaTTCTCCCTGCCGGCGCAGCACGTAATGCGCt < 1:8615700/35‑1 (MQ=255) aaaaTTCTCCCTGCCGGCGCAGCACGTAATGCGCt > 1:9985664/1‑35 (MQ=255) aaaaTTCTCCCTGCCGGCGCAGCACGTAATGCGCt > 1:9216145/1‑35 (MQ=255) aaaaTTCTCCCTGCCGGCGCAGCACGTAATGCGCt < 1:9313345/35‑1 (MQ=255) aaaaTTATCCctgcctgtctatgcttccctatcct > 1:18904275‑M2/1‑10 (MQ=255) aagttCTCCCTGCCGGCGCAGCACGTAATGCGCTg < 1:6800096/32‑1 (MQ=255) aaaTTCTCCctgcctgtctatgcttccctatcctt > 1:6709734‑M2/1‑9 (MQ=255) aaaTTCTCCCTGCCGGCGCAGCACGTAATGCGCTg > 1:8160686/1‑35 (MQ=255) aaaTTCTCCCTGCCGGCGCAGCACGTAATGCGCTg < 1:11826674/35‑1 (MQ=255) aaaTTCTCCCTGCCGGCGCAGCACGTAATGCGCTg < 1:13064832/35‑1 (MQ=255) aaTTCTCCCTGCCGGCGCAGCACGTAATGCGCTgg > 1:7338947/1‑35 (MQ=255) ttTTCCctgcctgtctatgcttccctatccttctg > 1:2830553‑M2/1‑6 (MQ=255) ttCTCCCTGCCGGCGCAGCACGTAATGCGCTGGAt > 1:8886419/1‑35 (MQ=255) ttCTCCCTGCCGGCGCAGCACGTAATGCGCTGGAt > 1:15635460/1‑35 (MQ=255) gtatccctgcctgtctatgcttccctatccttctg > 1:5394807‑M2/4‑6 (MQ=255) tctcCctgcctgtctatgcttccctatccttctgg > 1:9671164‑M2/1‑5 (MQ=255) tctcCCTGCCGGCGCAGCACGTAATGCGCTGGAtt > 1:7959128/1‑35 (MQ=255) tctcCCTGCCGGCGCAGCACGTAATGCGCTGGAtt < 1:9079981/35‑1 (MQ=255) tctcCCTGCCGGCGCAGCACGTAATGCGCTGGAtt > 1:12765730/1‑35 (MQ=255) tctcCCTGCCGGCGCAGCACGTAATGCGCTGGAtt < 1:429449/35‑1 (MQ=255) tctcCCTGCCGGCGCAGCACGTAATGCGCTAGAtt < 1:9024842/35‑1 (MQ=255) ccccccTGCCGGCGCAGCACGTAATGCGCTGGAtt < 1:7743563/32‑1 (MQ=255) ccccccTGCCGGCGCAGCACGTAATGCGCTGGAtt < 1:13426083/32‑1 (MQ=255) tcccctgcctgtctatgcttccctatccttctggt > 1:15024181‑M2/3‑4 (MQ=255) ctcCCTGCCGGCGCAGCACGTAATGCGCTGGATtg < 1:10939747/35‑1 (MQ=255) ctcCCTGCCGGCGCAGCACGTAATGCGCTGGATtg < 1:17531298/35‑1 (MQ=255) ctcCCTGCCGGCGCAGCACGTAATGCGCTGGATtg > 1:19653436/1‑35 (MQ=255) tcCCTGCCGGCGCAGCACGTAATGCGCTGGATtgt < 1:1207502/35‑1 (MQ=255) tcCCTGCCGGCGCAGCACGTAATGCGCTGGATtgt < 1:555235/35‑1 (MQ=255) tcCCTGCCGGCGCAGCACGTAATGCGCTGGATtgt > 1:19458447/1‑35 (MQ=255) cccctgcctgtctatgcttccctatccttctggtc > 1:11982018‑M2/2‑3 (MQ=255) cccTGCCGGCGCAGCACGTAATGCGCTGGATtgtg > 1:13845487/1‑35 (MQ=255) cccTGCCGGCGCAGCACGTAATGCGCTGGATtgtg < 1:6512298/35‑1 (MQ=255) cctgcctgtctatgcttccctatccttctggtcga > 1:6238941‑M2/1‑1 (MQ=255) cctgcctgtctatgcttccctatccttctggtcga > 1:11359118‑M2/1‑1 (MQ=255) ccTGCCGGCGCAGCACGTAATGCGCTGGATTGTGc < 1:14858857/35‑1 (MQ=255) ccTGCCGGCGCAGCACGTAATGCGCTGGATTGTGc > 1:15382644/1‑35 (MQ=255) | AGGGCTGACACGGGAGGAGTTGCAAAAAATTCTCCCTGCCGGCGCAGCACGTAATGCGCTGGATTGTGC > REL606/1387511‑1387579 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |