Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,517,306 | IS186 (+) +8 bp :: Δ2 | 56.2% | coding (187‑194/1743 nt) | ggt ← | gamma‑glutamyltranspeptidase periplasmic precursor |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 590715 = | NA (NA) | 34 (0.380) | 22/42 | NT | 41.2% | noncoding (1/1343 nt) | IS186 | repeat region |
? | REL606 | = 3517313 | 30 (0.540) | coding (187/1743 nt) | ggt | gamma‑glutamyltranspeptidase periplasmic precursor | |||||
* | ? | REL606 | = 2774194 | NA (NA) | 52 (0.530) | 28/46 | NT | 47.8% | noncoding (1341/1343 nt) | IS186 | repeat region |
? | REL606 | 3517306 = | 37 (0.580) | coding (194/1743 nt) | ggt | gamma‑glutamyltranspeptidase periplasmic precursor |
Only 100 of 224 total aligned reads displayed.
GGCGGCATCAACGGCATTCCCGCCCTCCTTGAGGATATCCACCCCCACCTGAGTGGCAGTGGCGTCCAC > REL606/3517272‑3517340 | ggcggcATCAACGGCATTCCCGCCCTCCTTGAGGa > 1:19030814/1‑35 (MQ=255) ggcggcATCAACGGCATTCCCGCCCTCCTTGAGGa > 1:7976850/1‑35 (MQ=255) ggcggcATCAACGGCATTCCCGCCCTCCTTGAGGa > 1:11018692/1‑35 (MQ=255) gcggcATCAACGGCATTCCCGCCCTCCTTGAGGat < 1:18098403/35‑1 (MQ=255) ggcATCAACGGCATTCCCGCCCTCCTTGAGGatat > 1:12316794/1‑35 (MQ=255) ggcATCAACGGCATTCCCGCCCTCCTTGAGGatat > 1:4343927/1‑35 (MQ=255) agatggttcaacccttaagttagcgcttatgatat < 1:14762480‑M2/4‑1 (MQ=255) gtaTCAACGGCATTCCCGCCCTCCTTGAGGATATc < 1:3885650/33‑1 (MQ=255) gcATCAACGGCATTCCCGCCCTCCTTGAGGATATc < 1:4740725/35‑1 (MQ=255) gcATCAACGGCATTCCCGCCCTCCTTGAGGATATc > 1:3778033/1‑35 (MQ=255) gcATCAACGGCATTCCCGCCCTCCTTGAGGATATc > 1:1699578/1‑35 (MQ=255) gcATCAACGGCATTCCCGCCCTCCTTGAGGATATc < 1:11879539/35‑1 (MQ=255) gatggttcaacccttaagttagcgcttatgATATc < 1:2474991‑M2/5‑1 (MQ=255) gatggttcaacccttaagttagcgcttatgATATc < 1:9367588‑M2/5‑1 (MQ=255) cATCAACGGCATTCCCGCCCTCCTTGAGGATATcc < 1:3072239/35‑1 (MQ=255) atggttcaacccttaagttagcgcttatgATATcc > 1:15395951‑M2/30‑35 (MQ=255) atggttcaacccttaagttagcgcttatgATATcc < 1:10854387‑M2/6‑1 (MQ=255) tggttcaacccttaagttagcgcttatgATATCCa > 1:6746172‑M2/29‑35 (MQ=255) aTCAACGGCATTCCCGCCCTCCTTGAGGATATCCa < 1:13160615/35‑1 (MQ=255) aTCAACGGCATTCCCGCCCTCCTTGAGGATATCCa > 1:17652773/1‑35 (MQ=255) aTCAACGGCATTCCCGCCCTCCTTGAGGATATCCa > 1:8136786/1‑35 (MQ=255) aTCAACGGCATTCCCGCCCTCCTTGAGGATATCCa < 1:7152327/35‑1 (MQ=255) aTCAACGGCATTCCCGCCCTCCTTGAGGATATCCa < 1:15020954/35‑1 (MQ=255) aTCAACGGCATTCCCGCCCTCCTTGAGGATATACa > 1:16493634/1‑35 (MQ=255) tCAACGGCATTCCCGCCCTCCTTGAGGATATCCag > 1:8389208/1‑34 (MQ=255) tCAACGGCATTCCCGCCCTCCTTGAGGATATCCAc < 1:10559467/35‑1 (MQ=255) tCAACGGCATTCCCGCCCTCCTTGAGGATATCCAc < 1:7666085/35‑1 (MQ=255) tCAACGGCATTCCCGCCCTCCTTGAGGATATCCAc < 1:1258034/35‑1 (MQ=255) tCAACGGCATTCCCGCCCTCCTTGAGGATATCCAc > 1:20529180/1‑35 (MQ=255) gttcaacccttaagttagcgcttatgATATCCAcc < 1:158722‑M2/9‑1 (MQ=255) cAACGGCATTCCCGCCCTCCTTGAGGATATCCACc < 1:14856814‑M2/35‑2 (MQ=255) cAACGGCATTCCCGCCCTCCTTGAGGATATCCACc < 1:7022537‑M2/35‑2 (MQ=255) aCGGCATTCCCGCCCTCCTTGAGGATATCCACccc > 1:18853787‑M2/1‑32 (MQ=255) aCGGCATTCCCGCCCTCCTTGAGGATATCCACccc > 1:1642104‑M2/1‑32 (MQ=255) aCGGCATTCCCGCCCTCCTTGAGGATATCCACccc < 1:1575225‑M2/35‑4 (MQ=255) aCGGCATTCCCGCCCTCCTTGAGGATATCCACccc < 1:2935386‑M2/35‑4 (MQ=255) caacccttaagttagcgcttatgATATCCAccccc < 1:8598031‑M2/12‑1 (MQ=255) cGGCATTCCCGCCCTCCTTGAGGATATCCACccca > 1:16231546‑M2/1‑31 (MQ=255) ggCATTCCCGCCCTCCTTGAGGATATCCACcccat > 1:6919031‑M2/1‑30 (MQ=255) ggCATTCCCGCCCTCCTTGAGGATATCCACCCCCa < 1:20603216/35‑1 (MQ=255) ggCATTCCCGCCCTCCTTGAGGATATCCACCCCCa < 1:8907556/35‑1 (MQ=255) ggCATTCCCGCCCTCCTTGAGGATATCCACCCCCa < 1:5596979/35‑1 (MQ=255) aacccttaagttagcgcttatgATATCCACCCCCa < 1:1598886‑M2/13‑1 (MQ=255) gCATTCCCGCCCTCCTTGAGGATATCCAAcccata > 1:13961622‑M2/1‑29 (MQ=255) acccttaagttagcgcttatgATATCCACCCCCAc > 1:18066939‑M2/22‑35 (MQ=255) cATTCCCGCCCTCCTTGAGGATATCCACcccataa > 1:6436929‑M2/1‑28 (MQ=255) cATTCCCGCCCTCCTTGAGGATATCCACCCCCAcc < 1:14072894/35‑1 (MQ=255) cATTCCCGCCCTCCTTGAGGATATCAACCCCCAcc < 1:7473494/35‑1 (MQ=255) ccttaagttagcgcttatgATATCCACCCCCACCt > 1:3840624‑M2/20‑35 (MQ=255) ccttaagttagcgcttatgATATCCACCCCCACCt < 1:5330067‑M2/16‑1 (MQ=255) ccttaagttagcgcttatgATATCCACCCCCACCt > 1:4255355‑M2/20‑35 (MQ=255) aTTCCCGCCCTCCTTGAGGATATCCACcccataag < 1:11341830‑M2/35‑9 (MQ=255) aTTCCCGCCCTCCTTGAGGATATCCACcccataag < 1:9568272‑M2/35‑9 (MQ=255) aTTCCCGCCCTCCTTGAGGATATCCACCCCCACCt < 1:18363625/35‑1 (MQ=255) aTTCCCGCCCTCCTTGAGGATATCCACCCCCACCt < 1:4205726/35‑1 (MQ=255) ttCCCGCCCTCCTTGAGGATATCCACcccataagc < 1:19654505‑M2/35‑10 (MQ=255) cttaagttagcgcttatgATATCCACCCCCACCTg > 1:19577918‑M2/19‑35 (MQ=255) cttaagttagcgcttatgATATCCACCCCCACCTg < 1:2684643‑M2/17‑1 (MQ=255) ttaagttagcgcttatgATATCCACCCCCACCTGa < 1:17034885‑M2/18‑1 (MQ=255) tCCCGCCCTCCTTGAGGATATCCACcccataagcg < 1:3514298‑M2/35‑11 (MQ=255) cccGCCCTCCTTGAGGATATCCACcccataagcgc < 1:11711293‑M2/35‑12 (MQ=255) cccGCCCTCCTTGAGGATATCCACCCCCACCTGag > 1:12448828/1‑35 (MQ=255) ccGCCCTCCTTGAGGATATCCACcccataagcgct < 1:12713030‑M2/35‑13 (MQ=255) ccGCCCTCCTTGAGGATATCCACCCCCACCTGagt > 1:9652288/1‑35 (MQ=255) aagttagcgcttatgATATCCACCCCCACCTGagt > 1:5885461‑M2/16‑35 (MQ=255) aagttagcgcttatgATATCCACCCCCACCTGagt > 1:6025790‑M2/16‑35 (MQ=255) cGCCCTCCTTGAGGATATCCACCCCCACCTGagtg < 1:20466816/35‑1 (MQ=255) gttagcgcttatgATATCCACCCCCACCTGagtgg < 1:2305173‑M2/22‑1 (MQ=255) gttagcgcttatgATATCCACCCCCACCTGagtgg < 1:7218555‑M2/22‑1 (MQ=255) gCCCTCCTTGAGCATATCCACCCCCACCTGagtgg > 1:784272/1‑35 (MQ=255) gCCCTCCNTGAGGATATCCACCCCCNCCTGagtgg > 1:5204290/1‑35 (MQ=255) ctcctcctTGAGGATATCCACCCCCACCTGagtgg < 1:10018741/33‑1 (MQ=255) ttagcgcttatgATATCCACCCCCACCTGagtggc < 1:17122041‑M2/23‑1 (MQ=255) cccTCCTTGAGGATATCCACCCCCACCTGagtggc < 1:11864198/35‑1 (MQ=255) tagcgcttatgATATCCACCCCCACCTGagtggca < 1:18521238‑M2/24‑1 (MQ=255) tagcgcttatgATATCCACCCCCACCTGagtggca > 1:4700682‑M2/12‑35 (MQ=255) cctcctTGAGGATATCCACCCCCACCTGagtggca > 1:10761003/1‑35 (MQ=255) cctcctTGAGGATATCCACCCCCACCTGagtggca < 1:7573586/35‑1 (MQ=255) ctcctTGAGGATATCCACcccataagcgctaactt > 1:10404178‑M2/1‑18 (MQ=255) ctcatTGAGGATATCCACCCCCACCTGagtggcag < 1:10733499/35‑1 (MQ=255) agcgcttatgATATCAACCCCCACCTGagtggcag < 1:1710257‑M2/25‑1 (MQ=255) tcctTGAGGATATCCACCCCCACCTGagtggcagt < 1:11540476/35‑1 (MQ=255) gcgcttatgATATCCACCCCCACCTgagtggcagg > 1:576251‑M2/10‑34 (MQ=255) cctTGAGGATATCCACcccataagcgctaacttaa > 1:501666‑M2/1‑16 (MQ=255) cctTGAGGATATCCACcccataagcgctaacttaa > 1:15575749‑M2/1‑16 (MQ=255) gcttatgATATCCACCCCCACCTGagtggcagtgg < 1:2754140‑M2/28‑1 (MQ=255) ttGAGGATATCCACcccataagcgctaacttaagg < 1:14508016‑M2/35‑22 (MQ=255) ttGAGGATATCCACCCCCACCTGagtggcagtggc < 1:19376479/35‑1 (MQ=255) cttatgATATCCACCCACACCTGagtggcagtggc < 1:10935883‑M2/29‑1 (MQ=255) ttaggATATCCACcccataagcgctaacttaaggg < 1:18729316‑M2/33‑23 (MQ=255) tGAGGATATCCACcccataagcgctaacttaaggg < 1:3060388‑M2/35‑23 (MQ=255) gAGGATATCCACaccataagcgctaacttaagggt > 1:4357556‑M2/1‑12 (MQ=255) gAGGATATCCACCCCCACCTGAGTGGCAGTGGCGt < 1:9292287/35‑1 (MQ=255) gAGGATATCCACCCCCACCTGAGTGGCAGTGGCGt < 1:3987416/35‑1 (MQ=255) atgATATCCACCCCCACCTGAGTGGCAGTGGCGTc < 1:8741824‑M2/32‑1 (MQ=255) aGGATATCCACcccataagcgctaacttaagggtt > 1:20601331‑M2/1‑11 (MQ=255) tgATATCCACCCCCACCTGAGTGGCAGTGGCGTcc < 1:16846064‑M2/33‑1 (MQ=255) tgATATCCACCCCCACCTGAGTGGCAGTGGCGTcc < 1:17908144‑M2/33‑1 (MQ=255) tgATATCCACCCCCACCTGAGTGGCAGTGGCGTcc < 1:20073057‑M2/33‑1 (MQ=255) gATATCCACcccataagcgctaacttaagggttgt > 1:13479754‑M2/1‑9 (MQ=255) | GGCGGCATCAACGGCATTCCCGCCCTCCTTGAGGATATCCACCCCCACCTGAGTGGCAGTGGCGTCCAC > REL606/3517272‑3517340 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |