New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2195257 | 78 (0.760) | 26 (0.260) | 7/46 | NT | 26.7% | coding (110/837 nt) | yeiG | predicted esterase |
? | REL606 | 2252861 = | 71 (0.690) | coding (142/264 nt) | napD | assembly protein for periplasmic nitrate reductase |
CTTTCTCCCCCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2195243‑2195257 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCACCACAATCAACTGACCGCTCGGCGCGTCGCT > REL606/2252861‑2252894 | ctcTCTCCCCCCCCCCCCACCACAATCAACTGACC < 1:14276249/32‑1 tcTCTCCCCCCCCCCCCACCACAATCAACTGACCG < 1:6267970/33‑1 TTTCTCCCCCCCCCCCCACCACAATCAACTGACCG < 1:1985292/35‑1 tcCTCCCCCCCCCCCCACCACAATCAACTGACCGC < 1:12151603/33‑1 TTCTCCCCCCCCCCCCACCACAATCAACTGACCGC < 1:3542025/35‑1 ccCCCCCCCCCCCCACCACAATCAACTGACCGCTC < 1:12396703/33‑1 ccCCCCCCCCCCCCACCACAATCAACTGACCGCTC < 1:12831873/33‑1 CTCCCCCCCCCCCCACCACAATCAACTGACCGCTC < 1:6282521/35‑1 aCCCCCGCCCCCACCACAATCAACTGACCGCTCGG < 1:2330272/34‑1 CCCCCCCCCCCCACCACAATCAACTGACCGCTCGG < 1:10606684/35‑1 CCCCCCCCCCCCACCACAATCAACTGACCGCTCGG < 1:11059529/35‑1 CCCCCCCCCCCCACCACAATCAACTGACCGCTCGG < 1:11701133/35‑1 CCCCCCCCCCCACCACAATCAACTGACCGCTCGGC < 1:2595159/35‑1 CCCCCCCCCCCACCACAATCAACTGACCGCTCGGC < 1:19050041/35‑1 CCCCCCCCCCCACCACAATCAACTGACCGCTCGGC < 1:15402944/35‑1 CCCCCCCCCCCACCACAATCAACTGACCGCTCGGC < 1:6843107/35‑1 CCCCCCCCCCCACCACAATCAACTGACCGCTCGGC < 1:8248413/35‑1 CCCCCCCCCCCACCACAATCAACTGACCGCTCGGC < 1:9862403/35‑1 CCCCCCCCCCCACCACAATCAACTGACCGCTCGGC < 1:9962475/35‑1 CCCCCCCCCCACCACAATCAACTGACCGCTCGGCG < 1:16557702/35‑1 CCCCCCCCCCACCACAATCAACTGACCGCTCGGCG < 1:1830579/35‑1 CCCCCCCCCCACCACAATCAACTGACCGCTCGGCG < 1:13177549/35‑1 CCCCCCCCCCACCACAATCAACTGACCGCTCGGCG < 1:13070144/35‑1 CCCCCCCCCCACCACAATCAACTGACCGCTCAGCG < 1:4102515/35‑1 gCCCCCCCCACCACAATCAACTGACCGCTCGGCGC < 1:5362724/34‑1 CCCCCCCCCACCACAATCAACTGACCGCTCGGCGC < 1:9968258/35‑1 CCCCCCCCCACCACAATCAACTGACCGCTCGGCGC < 1:19771894/35‑1 gCCCCCCCACCACAATCAACTGACCGCTCGGCGCG < 1:3415487/34‑1 CCCCCCCCACCACAATCAACTGACCGCTCGGCGCG < 1:2511587/35‑1 CCCCCCCCCACAATCAACTGACCGCTCGGCGCGTC < 1:1492124/35‑1 CCCCCCACCACAATCAACTGACCGCTCGGCGCGTC < 1:10066521/35‑1 CCCCACCACAATCAACTGACCGCTCGGCGCGTCGC < 1:1858518/35‑1 CCCCACCACAATCAACTGACCGCTCGGCGAGTCGC < 1:1550896/35‑1 CCCACCACAATCAACTGACCGCTCGGCGCGTCGCT < 1:7002787/35‑1 CCCACCACAATCAACTGACCGCTCGGCGCGTCGCT < 1:11997639/35‑1 CCCACCACAATCAACTGACCGCTCGGCGCGTCGCT < 1:9082136/35‑1 CCCACCACAATCAACTGACCGCTCGGCGCGTCGCT < 1:11559054/35‑1 CCCACCACAATCAACTGACCGCTCGGCGCGTCGCT < 1:10133485/35‑1 | CTTTCTCCCCCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2195243‑2195257 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCACCACAATCAACTGACCGCTCGGCGCGTCGCT > REL606/2252861‑2252894 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |