Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL606557,7890C→A100.0% ‑0.1 1C147* (TGC→TGAECB_00515conserved hypothetical protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (0/1):  ref base (0/0):  total (0/1)

AGGATGCGCCCTGTGTGGTACAGGTCGCAATGCGA  >  REL606/557757‑557791
                                |  
ctgATGCGCCCTGTGTGGTACAGGTCGCAATGAGa  <  1:5996708/33‑1 (MQ=1)
                                |  
AGGATGCGCCCTGTGTGGTACAGGTCGCAATGCGA  >  REL606/557757‑557791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.