New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1157306 = | 35 (0.340) | 4 (0.050) | 4/38 | NT | 11.3% | coding (1631/3186 nt) | rne | fused ribonucleaseE: endoribonuclease/RNA‑binding protein/RNA degradosome binding protein |
? | REL606 | = 1452435 | 35 (0.430) | intergenic (‑244/‑14) | acpD/hrpA | acyl carrier protein phosphodiesterase/ATP‑dependent helicase |
AGGTGCTGGGGCTACGACAGGCGCGGCAGGTTCAGCTGGGGTTGGCGCTGGCGGCACATCCGGCATGGC > REL606/1157272‑1157340 | aacaaaaattgacctttacggccttgcagcagcgg > 1:19163935‑M1/35‑35 (MQ=255) aacaaaaattgacctttacggccttgcagcagcgg < 1:18406681‑M1/1‑1 (MQ=255) aacaaaaattgacctttacggccttgcagcagcgg < 1:11566845‑M1/1‑1 (MQ=255) aacaaaaattgacctttacggccttgcagcagcgg > 1:5939704‑M1/35‑35 (MQ=255) aacaaaaattgacctttacggccttgcagcagcgg < 1:7121499‑M1/1‑1 (MQ=255) aacaaaaattgacctttacggccttgcagaagcgg < 1:6379086‑M1/1‑1 (MQ=255) aGGTGCTGGGGCTACGACAGGCGCGGCAGGTTCAg < 1:18940687/35‑1 (MQ=255) aGGTGCTGGGGCTACGACAGGCGCGGCAGGTTCAg < 1:18322092/35‑1 (MQ=255) aGGTGCGGGGGCTACGACAGGCGCGGCAGGTTCAg < 1:2642546/35‑1 (MQ=255) ggTGCTGGGGCTACGACAGGCGCGGCAGGTTCAGc < 1:8556472/35‑1 (MQ=255) ggTGCTGGGGCTACGACAGGCGCGGCAGGTTCAGc < 1:20091637/35‑1 (MQ=255) ggTGCTGGGGCTACGACAGGCGCGGCAGGTTCAGc < 1:14050940/35‑1 (MQ=255) acaaaaattgacctttacggccttgcagcagcggg < 1:15746550‑M1/2‑2 (MQ=255) acaaaaattgacctttacggccttgcagcagcgGc > 1:1735460‑M1/34‑35 (MQ=255) acaaaaattgacctttacggccttgcagcagcgGc < 1:11480904‑M1/2‑1 (MQ=255) gTGCTGGGGCTACGACAGGCGCGGCAGGTTCAGCt < 1:670827/35‑1 (MQ=255) gTGCTGGGGCTACGACAGGCGCGGCAGGTTCAGCt < 1:1544795/35‑1 (MQ=255) gTGCTGGGGCTACGACAGGCGCGGCAGGTTCAGCt < 1:7454198/35‑1 (MQ=255) gTGCTGGGGCTACGACAGGCGCGGCAGGTTCAGCt < 1:5888387/35‑1 (MQ=255) caaaaattgacctttacggccttgcagcagcgGCt > 1:6516239‑M1/33‑35 (MQ=255) tGCTGGGGCTACGACAGGCGCGGCAGGTTCAGCTg < 1:3369890/35‑1 (MQ=255) aaaaattgacctttacggccttgcagcagcgggtg < 1:3891892‑M1/4‑4 (MQ=255) aaaaattgacctttacggccttgcagcagcgGCTg > 1:18472557‑M1/32‑35 (MQ=255) gCTGGGCCTACGACAGGCGCGGCAGGTTCAGCTgg < 1:3271450/35‑1 (MQ=255) aaaattgacctttacggccttgcagcagcgGCTgg < 1:8519525‑M1/5‑1 (MQ=255) aaaattgacctttacggccttgcagcagcgGCTgg < 1:3459593‑M1/5‑1 (MQ=255) aaaattgacctttacggccttgcagcagcgGCTgg < 1:5563369‑M1/5‑1 (MQ=255) aaaattgacctttaaggccttgcagcagcgGCTgg > 1:3542467‑M1/31‑35 (MQ=255) aaattgacctttacggccttgcagcagcgGCTggg < 1:20085705‑M1/6‑1 (MQ=255) aaattgacctttacggccttgcagcagcgGCTggg < 1:10837843‑M1/6‑1 (MQ=255) tGGGGCTACGACAGGCGCGGCAGGTTCAGCTgggg < 1:5535510/35‑1 (MQ=255) tGGGGCTACGACAGGCGCGGCAGGTTCAGCTgggg < 1:17002341/35‑1 (MQ=255) tGGGGCTACGACAGGCGCGGCAGGTTCAGCTgggg < 1:10443377/35‑1 (MQ=255) aattgacctttacggccttgcagcagcgGCTgggg < 1:8571796‑M1/7‑1 (MQ=255) aattgacctttacggccttgcagcagcgGCTgggg < 1:11749525‑M1/7‑1 (MQ=255) ggggCTACGACAGGCGCGGCAGGTTCAGCTGGGGt < 1:615354/35‑1 (MQ=255) attgacctttacggccttgcagcagcgGCtggggg < 1:14297942‑M1/8‑2 (MQ=255) attgacctttacggccttgcagcagcgGCTGGGGt < 1:12833508‑M1/8‑1 (MQ=255) attgacctttacggccttgcagcagcgGCTGGGGt < 1:2050457‑M1/8‑1 (MQ=255) attgacctttacggccttgcagcagcgGCTGGGGt < 1:7036638‑M1/8‑1 (MQ=255) ttgacctttacggccttgcagcagcggctgggttc < 1:6950465‑M1/9‑4 (MQ=255) ttgacctttacggccttgcagcagcgGCTGGGGtt < 1:20529202‑M1/9‑1 (MQ=255) ttgacctttacggccttgcagcagcgGCTGGGGtt < 1:14829150‑M1/9‑1 (MQ=255) ttgacctttacggccttgcagcagcgGCTGGGGtt < 1:11632577‑M1/9‑1 (MQ=255) gggCTACGACAGGCGCGGCAGGTTCAGCTGGGGtt < 1:17973785/35‑1 (MQ=255) gggCTACAACAGGCGCGGCAGGTTCAGCTGGGGtt < 1:3866165/35‑1 (MQ=255) agccTACGACAGTCGCGGCAGGTTCAGCTGGGGtt < 1:9852325/32‑1 (MQ=37) ggCTACGACAGGCGCGGCAGGTTCAGCTGGGGTTg < 1:6247403/35‑1 (MQ=255) ggCTACGACAGGCGCGGCAGGTTCAGCTGGGGTTg < 1:18786396/35‑1 (MQ=255) ggCTACGACAGGCGCGGCAGGTTCAGCTGGGGTTg < 1:11120107/35‑1 (MQ=255) gCTACGACAGGCGCGGCAGGTTCAGCTGGGGTTgg < 1:1617986/35‑1 (MQ=255) gCTACGACAGGCGCGGCAGGTTCAGCTGGGGTTgg < 1:7015984/35‑1 (MQ=255) cTACGACAGGCGCGGCAGGTTCAGCTGGGGTTGgc < 1:3163244/35‑1 (MQ=255) cTACGACAGGCGCGGCAGGTTCAGCTGGGGTTGgc < 1:6560250/35‑1 (MQ=255) cTACGACAGGCGCGGCAGGTTCAGCTGGGGTTGgc < 1:11900590/35‑1 (MQ=255) tACGACAGGCGCGGCAGGTTCAGCTGGGGTTGgcg < 1:4377072/35‑1 (MQ=255) tACGACAGGCGCGGCAGGTTCAGCTGGGGTTGgcg < 1:294737/35‑1 (MQ=255) cctttacggccttgcagcagcgGCTGGGgttgctg < 1:9022777‑M1/13‑4 (MQ=255) cctttacggccttgcagcagcgGCTGGGGTTGgcg < 1:5710349‑M1/13‑1 (MQ=255) aCGACAGGCGCGGCAGGTTCAGCTGGGGTTGgcgc < 1:14080898/35‑1 (MQ=255) cGACAGGCGCGGCAGGTTCAGCTGGGGTTGGCGCt < 1:13625938/35‑1 (MQ=255) ttacggccttgcagcagcgGCTGGGGGTGGCGCTg < 1:8612109‑M1/16‑1 (MQ=255) tacggccttgcagcagcgGCTGGGGTTGGCGGTgg < 1:1348160‑M1/17‑1 (MQ=255) ccAGGCGCGGCAGGTTCAGCTGGGGTTGGCGCTgg < 1:3265697/34‑1 (MQ=255) aCAGGCGCGGCAGGTTCAGCTGGGGTTGGCGCTgg < 1:18238390/35‑1 (MQ=255) cAGGCGCGGCAGGTTCAGCTGGGGTTGGCGCTggc < 1:4122159/35‑1 (MQ=255) acggccttgcagcagcgGCTGGGGTTGGCGGTggc < 1:19635032‑M1/18‑1 (MQ=255) aGGCGCGGCAGGTTCAGCTGGGGTTGGCGCTggcg < 1:10085926/35‑1 (MQ=255) aGGCGCGGCAGGTTCAGCTGGGGTTGGCGCTggcg < 1:13653344/35‑1 (MQ=255) gcgcGGCAGTTTCAGCTGGGGTTGGCGCTggcggc < 1:9306934/35‑1 (MQ=255) gcgcGGCAGGTTCAGCTGGGGTTGGCGCTggcggc < 1:18989593/35‑1 (MQ=255) gcgcGGCAGGGTCAGCTGGGGGTGGGGCTggcggg > 1:8942687/1‑34 (MQ=21) cgGCAGGTTCAGCTGGGGTTGGCGCTGGCGGcaca < 1:3474991/35‑1 (MQ=255) ggCAGGTTCAGCTGGGGTTGGCGCTGGCGGCACAt < 1:8267030/35‑1 (MQ=255) gCAGGTTCAGCTGGGGTTGGCGCTGGCGGCACATc < 1:3401160/35‑1 (MQ=255) cAGGTTCAGCTGGGGTTGGCGCTGGCGGCACATcc > 1:6390600/1‑35 (MQ=255) cAGGTTCAGCTGGGGTTGGCGCTGGCGGCACATcc > 1:17319306/1‑35 (MQ=255) cAGGTTCAGCTGGGGTTGGCGCTGGCGGCACATcc < 1:3502848/35‑1 (MQ=255) ggTTCAGCTGGGGTTGGCGCTGGCGGGACATcccg > 1:357590/1‑33 (MQ=37) ggTTCAGCTGGGGTTGGCGCTGGCGGGACAAcccg > 1:10842132/1‑33 (MQ=25) gTTCAGCTGGGGTTGGCGCTGGCGGGACATccccc > 1:4211067/1‑32 (MQ=25) gTTCAGCTGGGGTTGGCGCTGGCGGCACATACGGc < 1:16587446/35‑1 (MQ=255) ttCAGCTGGGGTTGGCGCTGGCGGGCCCTCCGGCa > 1:19984405/1‑35 (MQ=21) ttCAGCTGGGGTTGGCGCTGGCGGGACCACCggga > 1:3877526/1‑33 (MQ=18) cAGCTGGGGTTGGCGCTGGCGGGCCAACCGGCAtc > 1:14928658/1‑34 (MQ=18) cAGCGGGGGTTGGCGCTGGCGGCACATCCGGCATg < 1:6341764/35‑1 (MQ=255) aGCGGGGGTTGGCGCTGGCGGCACATCCGGCATgg < 1:17926323/35‑1 (MQ=255) GCTGGGGTTGGCGCTGGCGGCACATCCGGCATGGc > 1:12496766‑M1/1‑35 (MQ=255) | AGGTGCTGGGGCTACGACAGGCGCGGCAGGTTCAGCTGGGGTTGGCGCTGGCGGCACATCCGGCATGGC > REL606/1157272‑1157340 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |