Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,517,306 | IS186 (+) +8 bp :: Δ2 | 56.2% | coding (187‑194/1743 nt) | ggt ← | gamma‑glutamyltranspeptidase periplasmic precursor |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 590715 = | NA (NA) | 34 (0.380) | 22/42 | NT | 41.2% | noncoding (1/1343 nt) | IS186 | repeat region |
? | REL606 | = 3517313 | 30 (0.540) | coding (187/1743 nt) | ggt | gamma‑glutamyltranspeptidase periplasmic precursor | |||||
* | ? | REL606 | = 2774194 | NA (NA) | 52 (0.530) | 28/46 | NT | 47.8% | noncoding (1341/1343 nt) | IS186 | repeat region |
? | REL606 | 3517306 = | 37 (0.580) | coding (194/1743 nt) | ggt | gamma‑glutamyltranspeptidase periplasmic precursor |
Only 100 of 233 total aligned reads displayed.
TCAACGGCATTCCCGCCCTCCTTGAGGATATCCACCCCCACCTGAGTGGCAGTGGCGTCCACAGACGCT > REL606/3517279‑3517347 | tCAACGGCATTCCCGCCCTCCTTGAGGATATCCAc < 1:18779442/35‑1 (MQ=255) tCAACGGCATTCCCGCCCTCCTTGAGGATATCCAc < 1:10559467/35‑1 (MQ=255) tCAACGGCATTCCCGCCCTCCTTGAGGATATCCAc < 1:1258034/35‑1 (MQ=255) tCAACGGCATTCCCGCCCTCCTTGAGGATATCCAc < 1:7666085/35‑1 (MQ=255) tCAACGGCATTCCCGCCCTCCTTGAGGATATCCAc > 1:20529180/1‑35 (MQ=255) ctaaCGGCATTCCCGCCCTCCTTGAGGATATCCAc < 1:3880129/33‑1 (MQ=255) cAACGGCATTCCCGCCCTCCTTGAGGATATCCACc > 1:3579304‑M2/1‑34 (MQ=255) aaCGGCATTCCCGCCCTCCTTGAGGATATCCACcc > 1:2106486‑M2/1‑33 (MQ=255) aCGGCATTCCCGCCCTCCTTGAGGATATCCACccc > 1:19239467‑M2/1‑32 (MQ=255) aCGGCATTCCCGCCCTCCTTGAGGATATCCACccc > 1:1642104‑M2/1‑32 (MQ=255) tggcATTCCCGCCCTCCTTGAGGATATCCACccca < 1:7353114‑M2/34‑5 (MQ=255) caacccttaagttagcgcttatgATATCCAccccc < 1:7207245‑M2/12‑1 (MQ=255) cGGCATTCCCGCCCTCCTTGAGGATATCCACccca > 1:16231546‑M2/1‑31 (MQ=255) ggCATTCCCGCCCTCCTTGAGGATATCCACCCCCa < 1:8907556/35‑1 (MQ=255) aacccttaagttagcgcttatgATATCCACCCCCa < 1:8719247‑M2/13‑1 (MQ=255) gCATTCCCGCCCTCCTTGAGGATATCCAAcccata > 1:13961622‑M2/1‑29 (MQ=255) acccttaagttagcgcttatgATATCCACCCCCAc < 1:15650415‑M2/14‑1 (MQ=255) cATTCCCGCCCTCCTTGAGGATATCCACcccataa < 1:1994146‑M2/35‑8 (MQ=255) cATTCCCGCCCTCCTTGAGGATATCCACCCCCAcc < 1:14072894/35‑1 (MQ=255) ccttaagttagcgcttatgATATCCACCCCCACCt < 1:19681203‑M2/16‑1 (MQ=255) ccttaagttagcgcttatgATATCCACCCCCACCt < 1:14950497‑M2/16‑1 (MQ=255) ccttaagttagcgcttatgATATCCACCCCCACCt < 1:5330067‑M2/16‑1 (MQ=255) aTTCCCGCCCTCCTTGAGGATATCCACcccataag < 1:9568272‑M2/35‑9 (MQ=255) aTTCCCGCCCTCCTTGAGGATATCCACCCCCACCt < 1:18363625/35‑1 (MQ=255) aTTCCCGCCCTCCTTGAGGATATCCACCCCCACCt < 1:7613652/35‑1 (MQ=255) ttCCCGCCCTCCTTGAGGATATCCACcccataagc > 1:6922249‑M2/1‑26 (MQ=255) ttCCCGCCCTCCTTGAGGATATCCACCCCCACCTg > 1:13176073/1‑35 (MQ=255) ttCCCGCCCTCCTTGAGGATATCCACCCCCACCTg > 1:17102818/1‑35 (MQ=255) cttaagttagcgcttatgATATCCACCCCCACCTg < 1:15986211‑M2/17‑1 (MQ=255) cttaagttagcgcttatgATATCCACCCCCACCTg < 1:2684643‑M2/17‑1 (MQ=255) tCCCGCCCTCCTTGAGGATATCCACCCCCACCTGa < 1:14394177/35‑1 (MQ=255) tCCCGCCCTCCTTGAGGATATCCACCCCCACCTGa > 1:5953009/1‑35 (MQ=255) tCCCGCCCTCCTTGAGGATATCCACCCCCACCTGa < 1:12423896/35‑1 (MQ=255) taagttagcgcttatgATATCCACCCCCACCTGag > 1:12997294‑M2/17‑35 (MQ=255) taagttagcgcttatgATATCCACCCCCACATGag < 1:20602169‑M2/19‑1 (MQ=255) cccGCCCTCCTTGAGGATATCCACcccataagcgc < 1:11711293‑M2/35‑12 (MQ=255) ccGCCCTCCTTGAGGATATCCACcccataagcgct < 1:18074974‑M2/35‑13 (MQ=255) ccGCCCTCCTTGAGGATATCCACcccataagcgct < 1:12713030‑M2/35‑13 (MQ=255) ccGCCCTCCTTGAGGATATCCACCCCCACCTGagt > 1:9652288/1‑35 (MQ=255) cGCCCTCCTTGAGGATATCCACcccataagcgcta > 1:17045165‑M2/1‑22 (MQ=255) cGCCCTCCTTGAGGATATCCACCCCCACCTGagtg < 1:20466816/35‑1 (MQ=255) agttagcgcttatgATATCCACCCCCACCTGagtg < 1:12458464‑M2/21‑1 (MQ=255) agttagcgcttatgATATCCACCCCCACCTGagtg > 1:9234131‑M2/15‑35 (MQ=255) gttagcgcttatgATATCCACCCCCACCTGagtgg < 1:2305173‑M2/22‑1 (MQ=255) gCCCTCCTTGAGCATATCCACCCCCACCTGagtgg > 1:784272/1‑35 (MQ=255) gCCCTCCNTGAGGATATCCACCCCCNCCTGagtgg > 1:5204290/1‑35 (MQ=255) ctcctcctTGAGGATATCCACCCCCACCTGagtgg < 1:10018741/33‑1 (MQ=255) ttagcgcttatgATATCCACCCCCACCTGagtggc < 1:15535501‑M2/23‑1 (MQ=255) cccTCCTTGAGGATATCCACCCCCACCTGagtggc < 1:4187498/35‑1 (MQ=255) tagcgcttatgATATCCACCCCCACCTGagtggca > 1:5400960‑M2/12‑35 (MQ=255) cctcctTGAGGATATCCACCCCCACCTGagtggca > 1:10761003/1‑35 (MQ=255) ctcctTGAGGATATCCACcccataagcgctaactt > 1:4709469‑M2/1‑18 (MQ=255) ctcctTGAGGATATCCACcccataagcgctaactt > 1:10404178‑M2/1‑18 (MQ=255) tcctTGAGGATATCCACCCCCACCTGagtggcagt < 1:11540476/35‑1 (MQ=255) gcgcttatgATATCCACCCCCACCTgagtggcagg > 1:576251‑M2/10‑34 (MQ=255) gcttatgATATCCACCCCCACCTGagtggcagtgg < 1:2754140‑M2/28‑1 (MQ=255) ctTGAGGATATCCACcccataagcgctaacttaag < 1:19629749‑M2/35‑21 (MQ=255) ttGAGGATATCCACcccataagcgctaacttaagg < 1:14508016‑M2/35‑22 (MQ=255) ttGAGGATATCCACCCCCACCTGagtggcagtggc < 1:11470381/35‑1 (MQ=255) ttGAGGATATCCACCCCCACCTGagtggcagtggc < 1:19376479/35‑1 (MQ=255) ttGAGGATATCCACCCCCACCTGagtggcaggggg > 1:7043363/1‑34 (MQ=255) cttatgATATCCACCCACACCTGagtggcagtggc < 1:10935883‑M2/29‑1 (MQ=255) ttatgATATCCACCCCCACCTGAGTGGCAGTGGCg < 1:4275925‑M2/30‑1 (MQ=255) ttatgATATCCACCCCCACCTGAGTGGCAGTGGCg < 1:18621781‑M2/30‑1 (MQ=255) tGAGGATATCCACcccataagcgctaacttaaggg < 1:17019764‑M2/35‑23 (MQ=255) tGAGGATATCCACcccataagcgctaacttaaggg < 1:3060388‑M2/35‑23 (MQ=255) tGAGGATATCCACCCCCACCTGagtggcagggggg > 1:8549444/1‑33 (MQ=38) gAGGATATCCACaccataagcgctaacttaagggt > 1:4357556‑M2/1‑12 (MQ=255) gAGGATATCCACCCCCACCTGAGTGGCAGTGGCGt < 1:3987416/35‑1 (MQ=255) gAGGATATCCACCCCCACCTGAGTGGCAGTGGCGt < 1:18000105/35‑1 (MQ=255) aGGATATCCACcccataagcgctaacttaagggtt < 1:15805813‑M2/35‑25 (MQ=255) aGGATATCCACCCCCACCTGAGTGGCAGTGGCGTc < 1:9729486/35‑1 (MQ=255) gtgatCCCCCCCCGCCTGAGTGGCAGTGGCGTCca < 1:20202456/32‑1 (MQ=25) gATATCCACCCCCACCTGAGTGGCAGTGGCGTCCa < 1:10788600‑M2/34‑1 (MQ=255) atatCCACCCCCACCTGAGTGGCAGTGGCGTCcac < 1:11874262/35‑1 (MQ=255) atatCAACCCCCACCTGAGTGGCAGTGGCGTCcac < 1:6788009/35‑1 (MQ=255) tatCCCCCCCCACCTGAGTGGCAGTGGCGTCcaca < 1:13559207/35‑1 (MQ=255) tatCCACcccataagcgctaacttaagggttgtgg > 1:18920703‑M2/1‑7 (MQ=255) atCCACcccataagcgctaacttaagggttgtggt < 1:10642343‑M2/35‑30 (MQ=255) atCCACCCCCACCTGAGTGGCAGTGGCGTCCACAg < 1:16074050/35‑1 (MQ=255) tCCACcccataagcgctaacttaagggttgtggta < 1:5067338‑M2/35‑31 (MQ=255) ccACcccataagcgctaacttaagggttgtggtat < 1:2817891‑M2/35‑32 (MQ=255) ccACCCCCACCTGAGTGGCAGTGGCGTCCACAGAc < 1:2949106/35‑1 (MQ=255) ccACACCCCCCTGAGTGGCAGTGGCGTCCACAGAc < 1:6835948/35‑1 (MQ=38) aCcccataagcgctaacttaagggttgtggtatta < 1:18115747‑M2/35‑34 (MQ=255) aCcccataagcgctaacttaagggttgtggtatta > 1:82570‑M2/1‑2 (MQ=255) aCcccataagcgctaacttaagggttgtggtatta > 1:17412133‑M2/1‑2 (MQ=255) aCcccataagcgctaacttaagggttgtggtatta > 1:16691976‑M2/1‑2 (MQ=255) aCcccataagcgctaacttaagggttgtggtatta > 1:12033125‑M2/1‑2 (MQ=255) aCcccataagcgctaacttaagggttgtggtatta > 1:12128879‑M2/1‑2 (MQ=255) aCcccataagcgctaacttaagggttgtggtatta > 1:6204484‑M2/1‑2 (MQ=255) aCcccataagcgctaacttaagggttgtggtatta < 1:344730‑M2/35‑34 (MQ=255) aCcccataagcgctaacttaagggttgtggtatta > 1:14664863‑M2/1‑2 (MQ=255) ccccataatcgctaacttaagggttgtggtattac < 1:4533329‑M2/35‑35 (MQ=255) ccccataagggctaacttaagggttgtggtattac > 1:3793453‑M2/1‑1 (MQ=255) ccccataagcgctaacttaaggtttgtggtattac < 1:17773658‑M2/35‑35 (MQ=255) ccccataagcgctaacttaagggttgtggtattac > 1:7573233‑M2/1‑1 (MQ=255) ccccataagcgctaacttaagggttgtggtattac > 1:6283330‑M2/1‑1 (MQ=255) ccccataagcgctaacttaagggttgtggtattac < 1:3072927‑M2/35‑35 (MQ=255) ccccataagcgctaacttaagggttgtggtattac > 1:18454627‑M2/1‑1 (MQ=255) | TCAACGGCATTCCCGCCCTCCTTGAGGATATCCACCCCCACCTGAGTGGCAGTGGCGTCCACAGACGCT > REL606/3517279‑3517347 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |