New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2216192 = | 62 (0.600) | 25 (0.310) | 6/38 | NT | 27.2% | coding (1142/1182 nt) | setB | lactose/glucose efflux system |
? | REL606 | = 3911582 | 85 (1.040) | coding (218/1551 nt) | yifB | predicted bifunctional enzyme and transcriptional regulator |
Only 100 of 179 total aligned reads displayed.
CAGATCAGCTGGAGCCAGGTTGATGGTGATTTTTTTCGCCGGATATTCATATCCGCTATTGATAATGGC > REL606/3911548‑3911616 | cAGATCAGCTGGAGCCAGGTTGATGGTGAtttttt > 1:7862716/1‑35 (MQ=255) cAGATCAGCTGGAGCCAGGTTGATGGTGAtttttt < 1:11612973/35‑1 (MQ=255) aGATCAGCTGGAGCCAGGTTGATGGTGATTTTTTt > 1:14402591‑M2/1‑34 (MQ=255) aGATCAGCTGGAGCCAGGTTGATGGCGATTTTTTt < 1:19773184‑M2/35‑2 (MQ=255) gATCAGCTGGAGCCAGGTTGATGGTGATTTTTTtc > 1:12297785‑M2/1‑33 (MQ=255) aTCAGCTGGAGCCAGGTTGATGGTGATTTTTTtcg > 1:4362125‑M2/1‑32 (MQ=255) aTCAGCTGGAGCCAGGTTGATGGTGATTTTTTtcg < 1:7322589‑M2/35‑4 (MQ=255) aTCAGCTGGAGCCAGGTTGATGGTGATTTTTTtcg < 1:17937059‑M2/35‑4 (MQ=255) tCAGCTGGAGCCAGGTTGATGGTGATTTTTTtcgc > 1:5919155‑M2/1‑31 (MQ=255) cAGCTGGAGCCAGGTTGATGGTGATTTTTTtcgcc < 1:6427056‑M2/35‑6 (MQ=255) cAGCTGGAGCCAGGTTGATGGTGATTTTTTtcgcc > 1:9277491‑M2/1‑30 (MQ=255) cAGCTGGAGCCAGGTTGATGGTGATTTTTTtcgcc > 1:15505987‑M2/1‑30 (MQ=255) cAGCTGGAGCCAGGTTGATGGTGATTTTTTtcgcc > 1:19561998‑M2/1‑30 (MQ=255) cAGCTGGAGCCAGGTTGATGGTGATTTTTTtcgcc < 1:8585542‑M2/35‑6 (MQ=255) aGCTGGAGCCAGGTTGATGGTGATTTTTTTCGCCg > 1:9767997/1‑35 (MQ=255) aGCTGGAGCCAGGTTGATGGTGATTTTTTTCGCCg > 1:16026932/1‑35 (MQ=255) aGCTGGAGCCAGGTTGATGGTGATTTTTTTCGCCg < 1:19263447/35‑1 (MQ=255) gttGGAGCCAGGTTGATGGTGATTTTTTTCGCCgg < 1:1778110/33‑1 (MQ=255) gCTGGAGCCAGGTTGATGGTGATTTTTTTCGCCgg < 1:15150629/35‑1 (MQ=255) gCTGGAGCCAGGTTGATGGTGATTTTTTTCGCCgg > 1:6316194/1‑35 (MQ=255) cTGGAGCCAGGTTGATGGTGATTTTTTTCGCCGGa < 1:15611529/35‑1 (MQ=255) cTGGAGCCAGGTTGATGGTGATTTTTTTCGCCGGa > 1:8521185/1‑35 (MQ=255) cTGGAGCCAGGTTGATGGTGATTTTTTTCGCCGGa > 1:107656/1‑35 (MQ=255) tGGAGCCAGGTTGATGGTGATTTTTTTCGCCGGat > 1:18403948/1‑35 (MQ=255) tGGAGCCAGGTTGATGGTGATTTTTTTCGCCGGat < 1:2289762/35‑1 (MQ=255) tGGAGCCAGGTTGATGGTGATTTTTTTCGCCGGat > 1:14818809/1‑35 (MQ=255) tGGAGCCAGGTTGATGGTGATTTTTTTCGCCGGat < 1:10195494/35‑1 (MQ=255) tGGAGCCAGGTTGATGGTGATTTTTTTCGCCGGat < 1:12955353/35‑1 (MQ=255) tGGAGCCAGGTTGATGGTGATTTTTTTCGCCGGat < 1:1301736/35‑1 (MQ=255) ggAGCCAGGTTGATGGTGATTTTTTTCGCCGGata > 1:274787/1‑35 (MQ=255) ggAGCCAGGTTGATGGTGATTTTTTTCGCCGGata < 1:13607521/35‑1 (MQ=255) ggAGCCAGGTTGATGGTGATTTTTTTCGCCGGata > 1:2537752/1‑35 (MQ=255) ggAGCCAGGTTGATGGTGATTTTTTTCGCCGGata < 1:16247178/35‑1 (MQ=255) gAGCCAGGTTGATGGTGATTTTTTTCGCCGGatat < 1:5703843/35‑1 (MQ=255) gAGCCAGGTTGATGGTGATTTTTTTCGCCGGatat > 1:6716723/1‑35 (MQ=255) gAGCCAGGTTGATGGTGATTTTTTTCGCCGGatat > 1:6983608/1‑35 (MQ=255) gAGCCAGGTTGATGGTGATTTTTTTCGCCGGatat > 1:19719264/1‑35 (MQ=255) gAGCCAGGTTGATGGTGATTTTTTTCGCCGGatat > 1:8933333/1‑35 (MQ=255) aGCCAGGTTGATGGTGATTTTTTTCGCCGGATAtt > 1:14633046/1‑35 (MQ=255) aGCCAGGTTGATGGTGATTTTTTTCGCCGGATAtt < 1:12481513/35‑1 (MQ=255) aGCCAGGTTGATGGTGATTTTTTTCGCCGGATAtt > 1:17748051/1‑35 (MQ=255) aGCCAGGTTGATGGTGATTTTTTTCGCCGGATAtt > 1:1771088/1‑35 (MQ=255) gCCAGGTTGATGGTGATTTTTTTCGCCGGATATTc < 1:603704/35‑1 (MQ=255) gCCAGGTTGATGGTGATTTTTTTCGCCGGATATTc > 1:16729894/1‑35 (MQ=255) ccAGGTTGATGGTGATTTTTTTCGCCGGATATTCa > 1:10647768/1‑35 (MQ=255) ccAGGTTGATGGTGATTTTTTTCGCCGGATATTCa < 1:10858519/35‑1 (MQ=255) cAGGTTGATGGTGATTTTTTTCGCCGGATATTCat < 1:7036848/35‑1 (MQ=255) cAGGTTGATGGTGATTTTTTTCGCCGGATATTCat > 1:12047286/1‑35 (MQ=255) cAGGTTGATGGTGATTTTTTTCGCCGGATATTCat < 1:12230079/35‑1 (MQ=255) aGGTTGATGGTGATTTTTTTCGCCGGATATTCata > 1:14937336/1‑35 (MQ=255) aGGTTGATGGTGATTTTTTTCGCCGGATATTCata > 1:13398057/1‑35 (MQ=255) aGGTTGATGGTGATTTTTTTCGCCGGATATTCata < 1:2303401/35‑1 (MQ=255) ggTTGATGGTGATTTTTTTCGCCGGATATTCatat > 1:16349727/1‑35 (MQ=255) ggTTGATGGTGATTTTTTTCGCCGGATATTCatat > 1:15076165/1‑35 (MQ=255) gTTGATGGTGATTTTTTTCGCCGGATATTCATATc < 1:3816991/35‑1 (MQ=255) gTTGATGGTGATTTTTTTCGCCGGATATTCATATc > 1:12807355/1‑35 (MQ=255) gTTGATGGTGATTTTTTTCGCCGGATATTCATATc > 1:20105297/1‑35 (MQ=255) ttGATGGTGATTTTTTTCTCCGGATATTCATATcc > 1:11376524/1‑35 (MQ=255) ttGATGGTGATTTTTTTCGCCGGATATTCATATcc > 1:13337564/1‑35 (MQ=255) ttGATGGTGATTTTTTTCGCCGGATATTCATATcc < 1:10528625/35‑1 (MQ=255) ttGATGGTGATTTTTTTCGCCGGATATTCATATcc > 1:5479443/1‑35 (MQ=255) ttGATGGTGATTTTTTTCGCCGGATATTCATATcc < 1:9058047/35‑1 (MQ=255) ttGATGGTGATTTTTTTCGCCGGATATTCATATcc > 1:18488206/1‑35 (MQ=255) ttGATGGTGATTTTTTTCGCCGGATATTCATATcc > 1:3227564/1‑35 (MQ=255) ttGATGGTGATTTTTTTCGCCGGATATTCATATcc < 1:2755501/35‑1 (MQ=255) tGATGGTGATTTTTTTCGCCGGATATTCATATCCg < 1:20027907/35‑1 (MQ=255) tGATGGTGATTTTTTTCGCCGGATATTCATATCCg < 1:5274162/35‑1 (MQ=255) tGATGGTGATTTTTTTCGCCGGATATTCATATCCg > 1:18111983/1‑35 (MQ=255) tGATGGTGATTTTTTTCGCCGGATATTCATATCCg < 1:17867164/35‑1 (MQ=255) gATGGTGATTTTTTTCGCCGGATATTCATATCCGc < 1:11108763/35‑1 (MQ=255) gATGGTGATTTTTTTCGCCGGATATTCATATCCGc < 1:1896688/35‑1 (MQ=255) gATGGTGATTTTTTTCGCCGGATATTCATATCCGc > 1:13107897/1‑35 (MQ=255) ttgGTGATGTTTTtcgccactctgttttgcttact > 1:1376070‑M2/2‑13 (MQ=255) gtgGTTATTTTTTtcgccactctgttttgcttact > 1:4978654‑M2/2‑13 (MQ=255) aTGGTGATTTTTTTCGCCGGATATTCATATCCGCt > 1:9621494/1‑35 (MQ=255) aTGGTGATTTTTTTCGCCGGATATTCATATCCGCt > 1:5082401/1‑35 (MQ=255) aTGGTGATTTTTTTCGCCGGATATTCATATCCGCt > 1:17332927/1‑35 (MQ=255) tGGTGATTTTTTtcgccactctgttttgcttactg > 1:8035095‑M2/1‑12 (MQ=255) tGGTAATTTTTTtcgccactctgttttgcttactg > 1:996692‑M2/1‑12 (MQ=255) ggTGTTTTTTTtcgccactctgttttgcttactgc > 1:5354516‑M2/1‑11 (MQ=255) ggTGATTTTTTTCGCCGGATATTCATATCCGCTaa > 1:4554146/1‑34 (MQ=255) gTGTTTTTTTtcgccactctgttttgcttactgcg > 1:4687927‑M2/1‑10 (MQ=255) gTGATTTTTTTCGCCGGATATTCATATCCGCTAtt > 1:16597440/1‑35 (MQ=255) gTGATTTTTTTCGCCGGATATTCATATCCGCTAtt > 1:5596581/1‑35 (MQ=255) gTGATTTTTTTCGCCGGATATTCATATCCGCTAtt > 1:8994364/1‑35 (MQ=255) tGTTTTTTTtcgccactctgttttgcttactgcgg > 1:3042381‑M2/1‑9 (MQ=255) tGTTTTTTTtcgccactctgttttgcttactgcgg > 1:2362885‑M2/1‑9 (MQ=255) tGATTTTTTTCGCCGGATATTCATATCCGCTATTg > 1:8420407/1‑35 (MQ=255) tGATTTTTTTCGCCGGATATTCATATCCGCTATTg > 1:19375302/1‑35 (MQ=255) gATTTTTTTCGCCGGATATTCATATCCGCTATTGa > 1:20530970/1‑35 (MQ=255) ttttttttcgccactctgttttgcttactgcggat > 1:4482243‑M2/2‑7 (MQ=255) tttttttcgccactctgttttgcttactgcggatt > 1:1707813‑M2/1‑6 (MQ=255) tttttttcgccactctgttttgcttactgcggatt > 1:13833679‑M2/1‑6 (MQ=255) tttttttcgccactctgttttgcttactgcggatt > 1:12332625‑M2/1‑6 (MQ=255) ttttttcgccactctgttttgcttactgcggatta > 1:17257692‑M2/1‑5 (MQ=255) ttttttcgccactctgttttgcttactgcggatta > 1:7332158‑M2/1‑5 (MQ=255) ttttttCGCCGGATATTCATATCCGCTATTGATaa < 1:14388658/35‑1 (MQ=255) tttttcgccactctgttttgcttactgcggattaa > 1:5869292‑M2/1‑4 (MQ=255) tttttCGCCGGATATTCATATCCGCTATTGATAAt > 1:13749507/1‑35 (MQ=255) ttcgccactctgttttgcttactgcggattaaaga > 1:8113712‑M2/1‑1 (MQ=255) | CAGATCAGCTGGAGCCAGGTTGATGGTGATTTTTTTCGCCGGATATTCATATCCGCTATTGATAATGGC > REL606/3911548‑3911616 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |