New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 32485 = | 59 (0.570) | 7 (0.070) | 6/46 | NT | 12.4% | coding (40/822 nt) | dapB | dihydrodipicolinate reductase |
? | REL606 | = 671859 | 42 (0.430) | coding (1118/1539 nt) | lnt | apolipoprotein N‑acyltransferase |
Only 100 of 121 total aligned reads displayed.
TGATGCAAACATCCGCGTTGCCATCGCGGGAGCCGGGGGGCGTATGGGCCGCCAGTTGATTCAGGCGGC > REL606/32451‑32519 | gcagtaagctcaataccatttaccgacagcggcgg < 1:2130238‑M1/1‑1 (MQ=255) gcagtaagctcaataccatttaccgacagcggcgg < 1:16832207‑M1/1‑1 (MQ=255) gatgCAAACATCCGCGTTGCCATCGCGGGAGCCgg > 1:18819469/1‑35 (MQ=255) cagtaagctcaataccatttaccgacagcggcggg < 1:1424975‑M1/2‑1 (MQ=255) cagtaagctcaataccatttaccgacagcggcggg < 1:15587864‑M1/2‑1 (MQ=255) cagtaagctcaataccatttaccgacagcggcggg < 1:8048419‑M1/2‑1 (MQ=255) atgCAAACATCCGCGTTGCCATCGCGGGAGCCggg > 1:8095314/1‑35 (MQ=255) agtaagctcaataccatttaccgacagcggcgggg < 1:11484819‑M1/3‑1 (MQ=255) agtaagctcaataccatttaccgacagcggcgggg < 1:4410801‑M1/3‑1 (MQ=255) agtaagctcaataccatttaccgacagcggcgggg < 1:3347716‑M1/3‑1 (MQ=255) agacAACCACCCGCGTTGCCATCGCGGGAGCCggg < 1:52384/32‑1 (MQ=25) tgCAAACATCCGCGTTGCCATCGCGGGAGCCgggg > 1:7225418/1‑35 (MQ=255) tgCAAACATCCGCGTTGCCATCGCGGGAGCCggcg > 1:67451/1‑33 (MQ=255) tacAACCATCCGCGTTGCCATCGCGGGAGCCgggg < 1:1315913/33‑1 (MQ=38) gtaagctcaataccatttaccgacagcggcggggg < 1:8172436‑M1/4‑1 (MQ=255) gtaagctcaataccatttaccgacagcggcggggg < 1:18056523‑M1/4‑1 (MQ=255) gtaagctcaataccatttaccgacagcggcggggg < 1:5808420‑M1/4‑1 (MQ=255) gtaagctcaataccatttaccgacagcggcgggcg < 1:1969855‑M1/4‑3 (MQ=255) taagctcaataccatttaccgacagcggcgggggg < 1:8067245‑M1/5‑1 (MQ=255) taagctcaataccatttaccgacagcggcgggggg < 1:2596441‑M1/5‑1 (MQ=255) taagctcaataccatttaccgacagcggcgggggg < 1:15670573‑M1/5‑1 (MQ=255) gCAACCATCCGCGTTGCCATCGCGGGAGCCggggg < 1:15168392/35‑1 (MQ=255) gCAAACATCCGCGTTGCCATCGCGGGAGCCggggg > 1:16334886/1‑35 (MQ=255) gCAAACATCCGCGTTGCCATCGCGGGAGCCggggg < 1:4816227/35‑1 (MQ=255) gCAAACATCCGCGTTGCCATCGCGGGAGCCggggg > 1:10367469/1‑35 (MQ=255) gCAAACATCCGCGTTGCCATCGCGGGAGCCggggg > 1:9754424/1‑35 (MQ=255) acAAACAGCCGCGTTGCCATCGCGGGAGCCggggg < 1:15612498/34‑1 (MQ=255) cAAACATCCGCGTTGCCATCGCGGGAGCCgggggg > 1:17924007/1‑35 (MQ=255) cAAACATCCGCGTTGCCATCGCGGGAGCCgggggg > 1:7483662/1‑35 (MQ=255) aagctcaataccatttaccgacagcggcggggggg < 1:4398186‑M1/6‑1 (MQ=255) aagctcaataccatttaccgacagcggcggggggg < 1:5144790‑M1/6‑1 (MQ=255) aagctcaataccatttaccgacagcggcggggggg < 1:12654929‑M1/6‑1 (MQ=255) aaccATCCGCGTTGCCATCGCGGGAGCCGGGGGGc < 1:6432916/32‑1 (MQ=255) aaaCATCCGCGTTGCCATCGCGGGAGCCGGGGGGc > 1:8647523/1‑35 (MQ=255) aaaCATCCGCGTTGCCATCGCGGGAGCCGGGGGGc < 1:13762586/35‑1 (MQ=255) aaaCATCCGCGTTGCCATCGCGGGAGCCGGGGGGc > 1:13170740/1‑35 (MQ=255) gctcaataccatttaccgacagcggcggggggggg < 1:8780359‑M1/8‑3 (MQ=255) aaCATCCGCGTTGCCATCGCTGGAGCCGGGGGGCg > 1:9029780/1‑35 (MQ=255) aaCATCCGCGTTGCCATCGCGGGAGCCGGGGGGCg > 1:16894603/1‑35 (MQ=255) aaCATCCGCGTTGCCATCGCGGGAGCCGGGGGGCg > 1:7236801/1‑35 (MQ=255) ctcaataccatttaccgacagcggcggggggggtg < 1:5856269‑M1/9‑4 (MQ=255) ctcaataccatttaccgacagcggcgggggggggt < 1:16635157‑M1/9‑4 (MQ=255) ctcaataccatttaccgacagcggcgggggggggt < 1:11104106‑M1/9‑4 (MQ=255) ccATCCGCGTTGCCATCGCGGGAGCCGGGGGGCGt < 1:15680645/34‑1 (MQ=255) ccATCCGCGTTGCCATCGCGGGAGCCGGGGGGCGt < 1:6623652/34‑1 (MQ=255) aCATCCGCGTTGCCATCGCGGGAGCCGGGGGGCgc > 1:18692983/1‑34 (MQ=255) aCATCCGCGTTGCCATCGCGGGAGCCGGGGGGCGt > 1:2289307/1‑35 (MQ=255) tcaataccatttaccgacagcggcgGGGGGGGGTa < 1:1329690‑M1/10‑1 (MQ=255) cATCCGCGTTGCCATCGCGGGAGCCGGGGGGCgca > 1:856507/1‑33 (MQ=255) cATCCGCGTTGCCATCGCGGGAGCCGGGGGGCGTa < 1:15842520/35‑1 (MQ=255) caataccatttaccgacagcggcgGGGGGGGGTAt < 1:16167329‑M1/11‑1 (MQ=255) caataccatttaccgacagcggcgGGGGGGGGTAt < 1:2312813‑M1/11‑1 (MQ=255) aTCCGCGTTGCCATCGCGGGAGCCTGGGGGCGTAt > 1:1622364/1‑35 (MQ=255) aTCCGCGTTGCCATCGCGGGAGCCGGGGGGCGTAt > 1:18043386/1‑35 (MQ=255) aTCCGCGTTGCCATCGCGGGAGCCGGGGGGCGTAt < 1:10299856/35‑1 (MQ=255) aTCCGCGTTGCCATCGCGGGAGCAGGGGGGCGTAt < 1:2248058/35‑1 (MQ=255) tCCGCGTTGGCATCGCGGGAGCCGGGGGGCGTATg < 1:7892981/35‑1 (MQ=255) tCCGCGTTGCCATCGCTGGAGCCGGGGGGCGTATg > 1:11868952/1‑35 (MQ=255) tCCGCGTTGCCATCGCGGGAGCCGGGGGGCGTATg < 1:3368031/35‑1 (MQ=255) ccGCGTTGCCATCGCGGGAGCCGGGGGGCGTATgg < 1:6199585/35‑1 (MQ=255) ccGCGTTGCCATCGCGGGAGCCGGGGGGCGTATgg < 1:19248039/35‑1 (MQ=255) taccatttaccgacagcggcgGGGGGGGGTATggg < 1:11745706‑M1/14‑1 (MQ=255) gcgTTGCCATCGCGGGAGCCGGGGGGCGTATGGgc > 1:20296392/1‑35 (MQ=255) accatttaccgacagcggcgGGGGGGGGTATGGgc < 1:6016835‑M1/15‑1 (MQ=255) gTTGCCATCGCGGGAGCCGGGGGGCGTATGGgccg > 1:8046399/1‑35 (MQ=255) gTTGCCATCGCGGGAGCCGGGGGGCGTATGGgccg > 1:19102997/1‑35 (MQ=255) gTTGCCATCGCGGGAGCCGGGGGGCGGATGGgccc > 1:10258846/1‑34 (MQ=255) catttaccgacagcggcgGGGGGGGGTATGGgccg < 1:1327696‑M1/17‑1 (MQ=255) ttGCCATCGCGGGAGCCGGGGGGCGTATGGgccgc < 1:14805233/35‑1 (MQ=255) tctccATCGCGGGAGCCGGGGGGCGTATGGgccgc < 1:19051788/32‑1 (MQ=255) tGCCATCGCGGGAGCCGGGGGGCGTATGGgccgcc > 1:12851715/1‑35 (MQ=255) gCCATCGCGGGAGCCGGGTGGCGTATGGGCCGCCa > 1:9719796/1‑35 (MQ=255) gCCATCGCGGGAGCCGGGGGGCGTATGGGCAGCCa < 1:2176623/35‑1 (MQ=255) ccATCGCGGGAGCCGGGGGGCGTATGGGCCGCCAg > 1:2127285/1‑35 (MQ=255) ccATCGCGGGAGCCGGGGGGCGTATGGGCCGCCAg > 1:14087218/1‑35 (MQ=255) cATCGCGGGAGCCGGGGGGCGTATGGGCCGCCAGt > 1:363232/1‑35 (MQ=255) aTCGCGGGAGCCGGGGGGCGTATGGGCCGCCAGtt > 1:10642873/1‑35 (MQ=255) aTCGCGGGAGCCGGGGGGCGTATGGGCCGCCAGtt > 1:12526984/1‑35 (MQ=255) tCGCGGGAGCTGGGGGGCGTATGGGCCGCCAGTTg < 1:15209268/35‑1 (MQ=255) ggggggAGCCGGGGGGCGTATGGGCCGCCAGTTGa < 1:17290863/32‑1 (MQ=255) cgcgGGAGCCGGGGGGCGTATGGGCCGCCAGTTGa > 1:2143015/1‑35 (MQ=255) cgcgGGAGCCGGGGGGCGTATGGGCCGCCAGTTGa > 1:9434900/1‑35 (MQ=255) cgcgGGAGCCGGGGGGCGTATGGGCCGCCAGTTGa > 1:16425290/1‑35 (MQ=255) gcgGGAGCCGGGGGGCGTATGGGCCGCCAGTTGAt > 1:20536693/1‑35 (MQ=255) gggAGCCGGGTGGCGTATTGGCCGCCAGTTGATTc > 1:10418404/1‑35 (MQ=37) gggAGCCGGGGGGCGTATGGGCCGCCAGTTGATTc > 1:14707797/1‑35 (MQ=255) ngAGCCGGGGGGCGTATGGGCCGCCAGTTGATTCn > 1:6734887/2‑35 (MQ=255) ggAGCCGGGGGGCGTATGGGCCGCCAGTTGATTCa > 1:17480108/1‑35 (MQ=255) gAGCCGGGGGGCGTATGGGCCGCCAGTTGACTCAg > 1:12125854/1‑35 (MQ=255) aGCCGGGGGGCGTATGGGCCGCCAGTTGATTCAgg > 1:14490024/1‑35 (MQ=255) gcgGGGGGGCTTATGGGCCGCCAGTTGATTCAggc > 1:10769223‑M1/4‑35 (MQ=255) gCCGGGGGGCGTATGGGCCGCCAGTTGATTCAggc < 1:19517132/35‑1 (MQ=255) cgGGGGGGCGTATGGGCCGCCAGTTGATTCAggcg > 1:6565032‑M1/3‑35 (MQ=255) ccGGGGGGCGTATGGGCCGCCAGTTGATTCAggcg > 1:11760540/1‑35 (MQ=255) ccGGGGGGCGTATGGGCCGCCAGTTGATTCAggcg > 1:9107620/1‑35 (MQ=255) ccGGGGGGCGTATGGGCCGCCAGTTGATTCAggcg > 1:9294509/1‑35 (MQ=255) ccGGGGGGCGTATGGGCCGCCAGTTGATTCAggcg > 1:14586937/1‑35 (MQ=255) cGGGGGGCGTATGGGCCGCCAGTTGATTCAggcgg > 1:7524550/1‑35 (MQ=255) cGGGGGGCGTATGGGCCGCCAGTTGATTCAggcgg > 1:3638250/1‑35 (MQ=255) GGGGGGCGTATGGGCCGCCAGTTGATTCAggcggc > 1:12400694‑M1/1‑35 (MQ=255) | TGATGCAAACATCCGCGTTGCCATCGCGGGAGCCGGGGGGCGTATGGGCCGCCAGTTGATTCAGGCGGC > REL606/32451‑32519 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |