New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 389983 | 64 (0.620) | 8 (0.100) | 5/36 | NT | 10.3% | coding (575/1374 nt) | proY | predicted cryptic proline transporter |
? | REL606 | = 3813056 | 92 (1.190) | intergenic (‑137/‑797) | ivbL/emrD | ilvB operon leader peptide/multidrug efflux system protein |
Only 100 of 151 total aligned reads displayed.
CCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATG > REL606/389949‑390017 | ccgcccgTTATTCATAACCTGTGGAGCAAcggcgg < 1:9317742/35‑1 (MQ=25) ccaaccgTTATTCATAACCTGTGGAGCAAcggcgg < 1:8545202/32‑1 (MQ=25) gaccgGTATTCATAACCTGTGGAGCAACGGCGGgt > 1:2686075‑M1/1‑33 (MQ=255) gaccgGTATTCATAACCTGTGGAGCAACGGCGGgt > 1:4231159‑M1/1‑33 (MQ=255) gaccgGTATTCATAACCTGTGGAGCAACGGCGGgt > 1:6503178‑M1/1‑33 (MQ=255) gaccgGTATTCATAACCTGTGGAGCAACGGCGGgg > 1:5652978‑M1/1‑33 (MQ=255) gaccgGTATTCATAACCTGTGGAGCAACGGCGGgc > 1:19253509‑M1/1‑33 (MQ=255) gaccgGTATTCATAACCTGTGGAGCAACGGCGGct > 1:14461628/1‑35 (MQ=255) ccgggTATTCATAACCTGTGGAGCAACGGCGGctt < 1:12603325/32‑1 (MQ=255) accgGTATTCATAACCTGTGGAGCAACggcggcct > 1:955301/1‑33 (MQ=255) accgGTATTCATAACCTGTGGAGCAACGGCGGggt > 1:19327987‑M1/1‑32 (MQ=255) ccgGTATTCATAACCTGTGGAGCAACGGCGGggtc > 1:4493295‑M1/1‑31 (MQ=255) ccgGTATTCATAACCTGTGGAGCAACGGCGGgctt > 1:13568657‑M1/1‑31 (MQ=255) ccgGTATTCATAACCTGTGGAGCAACGGCGGcgtt > 1:5382434‑M1/1‑31 (MQ=255) cgGTATTCATAACCTGTGGAGCAACGGCGGgttct > 1:3856064/1‑35 (MQ=255) tttATTCATAACCTGTGGAGCAACGGCGGcttctt < 1:3104976/33‑1 (MQ=255) gttATTCATAACCTGTGGAGCAACGGCGGcttctt < 1:16552436/33‑1 (MQ=255) gttATTCATAACCTGTGGAGCAACGGCGGcttctt < 1:11064098/33‑1 (MQ=255) ggTATTCATAACCTGTGGAGCAACGGCGGcttctt < 1:4465265/35‑1 (MQ=255) ttATCCATAACCTGTGGAGCAACGGCGGCttcttc < 1:18542124/34‑1 (MQ=255) gTATTCATAACCTGTGGAGCAACGGCGGgtttttt > 1:18344343‑M1/1‑28 (MQ=255) gTATTCATAACCTGTGGAGCAACGGCGGgtttttt > 1:11090048‑M1/1‑28 (MQ=255) gTATTCATAACCTGTGGAGCAACGGCGGCttcttc > 1:6963522/1‑35 (MQ=255) tATTCATAACCTGTGGAGCAACGGCGGgttttttt > 1:3803041‑M1/1‑27 (MQ=255) tATTCATAACCTGTGGAGCAACGGCGGCTTCTTCa < 1:13797146/35‑1 (MQ=255) aTTCATAACCTGTGGAGCAACGGCGGggttttttg > 1:7720340‑M1/1‑26 (MQ=255) ttCATAACCTGTGGAGCAACGGCGGggttttttgt > 1:7550068‑M1/1‑25 (MQ=255) ttCATAACCTGTGGAGCAACGGCGGCTTTTTCCGt > 1:20066354/1‑35 (MQ=25) ttCATAACCTGTGGAGCAACGGCGGCTTCTTCAGt < 1:19766916/35‑1 (MQ=255) tCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTa < 1:17770581/35‑1 (MQ=255) cATAACCTGTGGAGCAACGGCGGggtcttttgtta > 1:3453930‑M1/1‑23 (MQ=255) cATAACCTGTGGAGCAACGGCGGCTTCTTCAGTaa < 1:11908010/35‑1 (MQ=255) cATAACCTGTGGAGAAACGGCGGCTTCTTCAGTaa < 1:5920322/35‑1 (MQ=255) ttAACCTGTGGAGCAACGGCGGCTTCTTCAGTAAc < 1:19410492/34‑1 (MQ=255) aTAACCTGTGGAGCAACGGCGGCTTCTTCAGTAAc < 1:10968081/35‑1 (MQ=255) aTAACCTGTGGAGCAACGGCGGCTTCTTCAGTAAc < 1:7481430/35‑1 (MQ=255) tAACCTGTGGAGCAACGGCGGGTTTTTTAGTAACg > 1:18157040/1‑35 (MQ=21) tAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACg < 1:15005585/35‑1 (MQ=255) tAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACg < 1:13288940/35‑1 (MQ=255) aaCCTGTGGAGCAACGGCGGGTTTTTTAGTAAAgg > 1:630132/1‑35 (MQ=16) aaCCTGTGGAGCAACGGCGGCTTCTTCAGTAACgg < 1:8916939/35‑1 (MQ=255) aCCTGTGGAGCAACGGCGGCTTCTTCAGTAACggc < 1:13508955/35‑1 (MQ=255) ccggtgGAGCAACGGCGGCTTCTTCAGTAACggct < 1:17408876/32‑1 (MQ=255) ccTGTGGAGCACCGGCGGCTTCTTCAGTAACggct < 1:2661268/35‑1 (MQ=255) cTGTGGAGCACCGGCGGCTTCTTCAGTAACggctg < 1:12325984/35‑1 (MQ=255) ttgggAGCAACGGCGGCTTCTTCAGTAACggctgg < 1:17357370/32‑1 (MQ=255) tgtgGAGCAACGGCGGCTTCTTCAGTAACggctgg < 1:2938497/35‑1 (MQ=255) tgGAGCAACGGCGGCTTCTTCAGTAACggctggct < 1:20300117/35‑1 (MQ=255) tgGAGCAACGGCGGCTTCTTCAGTAACggctggct < 1:14180694/35‑1 (MQ=255) ggAGCAACGGCGGCTTCTTCAGTAACGGCTGGCtt < 1:8446344/35‑1 (MQ=255) gAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTg < 1:13000744/35‑1 (MQ=255) gAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTg < 1:13866374/35‑1 (MQ=255) gCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGc < 1:8886691/35‑1 (MQ=255) gCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGc < 1:14069758/35‑1 (MQ=255) acAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGc < 1:2077189/34‑1 (MQ=255) aaCGGCGGCTTCTTCAGTAACGGCTGGCTTGGCAt < 1:15960053/35‑1 (MQ=255) aCGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATg < 1:19410524/35‑1 (MQ=255) aCGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATg < 1:4087569/35‑1 (MQ=255) cggcggggttttttgttatctgcaattcagtacaa < 1:1800338‑M1/35‑30 (MQ=255) cggcggggttttttgttatctgcaattaagtacaa < 1:6496409‑M1/35‑30 (MQ=255) cggcggCTTCTTCAGTAACGGCTGGCTTGGCATgg < 1:15312563/35‑1 (MQ=255) cggcggCTTCTTCAGTAACGGCTGGCTTGGCATgg < 1:6835075/35‑1 (MQ=255) cggcggCTTCTTCAGTAACGGCTGGCTTGGCATgg < 1:7928782/35‑1 (MQ=255) ggctgggttttttgttatctgcaattcagtacaaa > 1:934885‑M1/1‑5 (MQ=255) ggcggggttttttgttatctgcaattcagtacaaa < 1:5496811‑M1/35‑31 (MQ=255) ggcggggttttttgttatctgcaattcagtacaaa > 1:1017486‑M1/1‑5 (MQ=255) ggcggcTTCTTCAGTAACGGCTGGCTTGGCATGGt < 1:15575089/35‑1 (MQ=255) gcggggttttttgttatctgcaattcagtacaaaa > 1:1141607‑M1/1‑4 (MQ=255) gcggcTTCTTCAGTAACGGCTGGCTTGGCATGGTa < 1:12573167/35‑1 (MQ=255) gcggcTTCTTCAGTAACGGCTGGCTTGGCATGGTa < 1:12363576/35‑1 (MQ=255) gcggcTTCTTCAGTAACGGCTGGCTTGGCATGGTa < 1:6712664/35‑1 (MQ=255) cggggttttttgttatctgcaattcagtacaaaac < 1:6794658‑M1/35‑33 (MQ=255) cggggttttttgttatctgcaattcagtacaaaac > 1:7947040‑M1/1‑3 (MQ=255) cggggttttttgttatctgcaattcagtacaaaac < 1:5359911‑M1/35‑33 (MQ=255) cggggttttttgttatctgcaattcagtacaaaac < 1:18659189‑M1/35‑33 (MQ=255) cggcTTCTTCAGTAACGGCTGGCTTGGCATGGTaa < 1:4549926/35‑1 (MQ=255) cggcTTCTTCAGTAACGGCTGGCTTGGCATGGTaa < 1:793682/35‑1 (MQ=255) cggcTTCTTCAGTAACGGCTGGCTTGGCATGGTaa < 1:18820024/35‑1 (MQ=255) ggggttttttgttatctgcaattcagtacaaaacg > 1:16802864‑M1/1‑2 (MQ=255) ggggttttttgttatctgcaattcagtacaaaacg > 1:16612700‑M1/1‑2 (MQ=255) ggggttttttgttatctgcaattcagtacaaaacg > 1:10814122‑M1/1‑2 (MQ=255) ggggttttttgttatctgcaattcagtacaaaacg < 1:8381026‑M1/35‑34 (MQ=255) ggggttttttgttatctgcaattcagtacaaaacg > 1:1060720‑M1/1‑2 (MQ=255) ggggttttttgttatctgcaattcagtacaaaacg > 1:18741165‑M1/1‑2 (MQ=255) ggggttttttgttatctgcaattcagtacaaaacg > 1:2379911‑M1/1‑2 (MQ=255) ggggttttttgttatctgcaattcagtacaaaacg > 1:3319778‑M1/1‑2 (MQ=255) ggggttttttgttatctgcaattcagtacaaaacg > 1:483400‑M1/1‑2 (MQ=255) ggcTTCTTCAGTAACGGCTGGCTTGGCATGGTAAt < 1:7153796/35‑1 (MQ=255) ggcTTCTTCAGTAACGGCTGGCTTGGCATGGTAAt < 1:10684612/35‑1 (MQ=255) ggcTTCTTCAGTAACGGCTGGCTTGGCATGGTAAt < 1:3741286/35‑1 (MQ=255) gggttttttgttatctgcaatttagtacaaaacgt < 1:18465832‑M1/35‑35 (MQ=255) gggttttttgttatctgcaattcagtacaaaacgt < 1:8422595‑M1/35‑35 (MQ=255) gggttttttgttatctgcaattcagtacaaaacgt > 1:11032337‑M1/1‑1 (MQ=255) gggttttttgttatctgcaattcagtacaaaacgt < 1:6670381‑M1/35‑35 (MQ=255) gggttttttgttatctgcaattcagtacaaaacgt > 1:12836542‑M1/1‑1 (MQ=255) gggttttttgttatctgcaattcagtacaaaacgt < 1:17485325‑M1/35‑35 (MQ=255) gggttttttgttatctgcaattcagtacaaaacgt > 1:16709205‑M1/1‑1 (MQ=255) gggttttttgttatctgcaattcagtacaaaacgt > 1:16082044‑M1/1‑1 (MQ=255) gcTTCTTCAGTAACGGCTGGCTTGGCATGGTAATg < 1:12768819/35‑1 (MQ=255) gcTTCTTCAGTAACGGCTGGCTTGGCATGGTAATg < 1:3828744/35‑1 (MQ=255) | CCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATG > REL606/389949‑390017 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |