New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 514780 = | 90 (0.880) | 3 (0.050) | 3/28 | NT | 8.3% | coding (727/1146 nt) | glxK | glycerate kinase II |
? | REL606 | 1871739 = | 14 (0.230) | coding (75/1911 nt) | yoaA | conserved protein with nucleoside triphosphate hydrolase domain |
GCCGCAATACCCATACCGCCCGCAGCGCCGCCGCCCGCCATCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/514823‑514780 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccatctgTCGCTGTGGTTCTCGCGGCTTAAAGCCTGGTATC > REL606/1871739‑1871772 GCCGCAATACCCATACCGCCCGCAGCGCCGCCGCC > 1:12942430/1‑35 CCGCAATACCCATACCGCCCGCAGCGCCGCCGCCC > 1:16247189/1‑35 CCGCAATACCCATACCGCCCGCAGCGCCGCCGCCC > 1:12957009/1‑35 CCGCAATACCCATACCGCCCGCAGCGCCGCCGCCC > 1:3979638/1‑35 CGCAATACCCATACCGCCCGCAGCGCCGCCGCCCG > 1:19422811/1‑35 GCAATACCCATACCGCCCGCAGCGCCGCCGCCCGC > 1:9087075/1‑35 GCAATACCCATACCGCCCGCAGCGCCGCCGCCCGC > 1:8517338/1‑35 CAATACCCATACCGCCCGCAGCGCCGCCGCCCGCC > 1:14494216/1‑35 CAATACCCATACCGCCCGCAGCGCCGCCGCCCGCC > 1:19801778/1‑35 CAATACCCATACCGCCCGCAGCGCCGCCGCCCGCC > 1:12449572/1‑35 AATACCCATACCGCCCGCAGCGCCGCCGCCCGCCA > 1:10966993/1‑35 ATACCCATACCGCCCGCAGCGCCGCCGCCCGCCAT > 1:10218001/1‑35 TACCCATACCTCCCGCAGCGCCGCCGCCCGCCATC > 1:11446334/1‑35 TACCCATACCGCCCGCAGCGCCGCCGCCCGCCATC > 1:15788155/1‑35 CCCATACCGCCCGCAGCGCCGCCGCCCGCCATCTG > 1:6347164/1‑35 GCCGCCTCCCGCCATCTGTCGCTGTGGTTCTCGCG < 1:7131828/35‑1 CCGCCTCCCGCCATCTGTCGCTGTGGTTCTCGCGG < 1:4716095/35‑1 CGCCTCCCGCCATCTGTCGCTGTGGTTCTCGCGGC < 1:14158055/35‑1 gctCCCGCCATCTGTCGCTGTGGTTCTCGCGGCTT < 1:13858409/32‑1 gctCCCGCCATCTGTCGCTGTGGTTCTCGCGGCTT < 1:11250287/32‑1 tCCCGCCATCTGTCGCTGTGGTTCTCGCGGCTTAA < 1:7365380/34‑1 tCCCGCCATCTGTCGCTGTGGTTCTCGCGGCTTAA < 1:7991570/34‑1 CCCGCCATCTGTCGCTGTGGTTCTCGCGGCTTAAA < 1:17208693/35‑1 CCCGCCATCTGTCGCTGTGGTTCTCGCGGCTTAAA < 1:6150779/35‑1 CCCGCCATCTGTCGCTGTGGTTCTCGCGGCTTAAA < 1:5605228/35‑1 CCCGCCATCTGTCGCTGTGGTTCTCGCGGCTTAAA < 1:5110079/35‑1 caGCCATCTGTCGCTGTGGTTCTCGCGGCTTAAAG < 1:241780/33‑1 CCGCCATCTGTCGCTGTGGTTCTCGCGGCTTAAAG < 1:20193929/35‑1 CGCCATCTGTCGCTGTGGTTCTCGCGGCTTAAAGC < 1:783318/35‑1 CGCCATCTGTCGCTGTGGTTCTCGCGGCTTAAAGC < 1:10018240/35‑1 CGCCATCTGTCGCTGTGGTTCTCGCGGCTTAAAGC < 1:10612336/35‑1 CGCCATCTGTCGCTGTGGTTCTCGCGGCTTAAAGC < 1:15071661/35‑1 CGCCATCTGTCGCTGTGGTTCTCGCGGCTTAAAGC < 1:12906909/35‑1 GCCATCTGTCGCTGTGGTTCTCGCGGCTTAAAGCC < 1:5901218/35‑1 GCCATCTGTCGCTGTGGTTCTCGCGGCTTAAAGCC < 1:12566607/35‑1 CCATCTGTCGCTGTGGTTCTCGCGGCTTAAAGCCT < 1:9552715/35‑1 CCATCTGTCGCTGTGGTTCTCGCGGCTTAAAGCCT < 1:8212171/35‑1 CATCTGTCGCTGTGGTTCTCGCGGCTTAAAGCCTG < 1:1812372/35‑1 CATCTGTCGCTGTGGTTCTCGCGGCTTAAAGCCTG < 1:13381616/35‑1 ATCTGTCGCTGTGGTTCTCGCGGCTTAAAGCCTGG < 1:7364137/35‑1 ATCTGTCGCTGTGGTTCTCGCGGCTTAAAGCCTGG < 1:2027094/35‑1 TCTGTCGCTGTGGTTCTCGCGGCTTAAAGCCTGGT < 1:6332921/35‑1 TCTGTCGCTGTGGTTCTCGCGGCTTAAAGCCTGGT < 1:17717180/35‑1 CTGTCGCTGTGGTTCTCGCGGCTTAAAGCCTGGTA < 1:6660471/35‑1 TGTCGCTGTGGTTCTCGCGGCTTAAAGCCTGGTAT < 1:5993727/35‑1 GTCGCTGTGGTTCTCGCGGCTTAAAGCCTGGTATC < 1:1385074/35‑1 GTCGCTGTGGTTCTCGCGGCTTAAAGCCTGGTATC < 1:9666799/35‑1 GCCGCAATACCCATACCGCCCGCAGCGCCGCCGCCCGCCATCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/514823‑514780 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccatctgTCGCTGTGGTTCTCGCGGCTTAAAGCCTGGTATC > REL606/1871739‑1871772 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |