New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2234598 = | 88 (0.860) | 15 (0.180) | 5/38 | NT | 16.6% | coding (538/1008 nt) | yejK | nucleoid‑associated protein NdpA |
? | REL606 | 3944634 = | 81 (1.000) | intergenic (+23/‑124) | proM/aslB | tRNA‑Pro/predicted regulator of arylsulfatase activity |
Only 100 of 164 total aligned reads displayed.
CCTTCGCTGGCCCCGAGGAAATCCATAAAGAAATCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAA > REL606/2234564‑2234632 | cTTCGCTGTCCCCGAGGAAATCCATAAAGAAATcc > 1:19475397/1‑35 (MQ=255) cTTCGCTGGCCCCGAGGAAATCCATAAAGAAATcc > 1:14444153/1‑35 (MQ=255) cTTCGCTGGCCCCGAGGAAATCCATAAAGAAATcc < 1:6297841/35‑1 (MQ=255) cTTCGCTGGCCCCGAGGAAATCCATAAAGAAATcc < 1:1358518/35‑1 (MQ=255) cTTCGCTGGCCCCGAGGAAATCCATAAAGAAATcc > 1:12642951/1‑35 (MQ=255) ttCGCTGGCCCCGAGGAAATCCATAAAGAAATCCg < 1:6249333/35‑1 (MQ=255) tCGCTGGCCCCGAGGAAATCCATAAAGAAATCCGc > 1:19325182/1‑35 (MQ=255) tCGCTGGCCCCGAGGAAATCCATAAAGAAATCCGc > 1:11388239/1‑35 (MQ=255) tCGCTGGCCCAGAGGAAATCCATAAAGAAATCCGc < 1:2869788/35‑1 (MQ=255) cGCTGGCCCCGAGGAAATCCATAAAGAAATCCGcc < 1:19032745/35‑1 (MQ=255) cGCTGGCCCCGAGGAAATCCATAAAGAAATCCGcc < 1:19812541/35‑1 (MQ=255) cGCTGGCCCCGAGGAAATCCATAAAGAAATCCGcc > 1:2560794/1‑35 (MQ=255) cGCTGGCCCCGAGGAAATCCATAAAGAAATCCGcc < 1:892287/35‑1 (MQ=255) gcaggCCCCGAGGAAATCCATAAAGAAATCCGCCa > 1:3753560/4‑35 (MQ=255) gCTGGCCCCGAGGAAATCCATAAAGAAATCCGCCa < 1:1702041/35‑1 (MQ=255) gCTGGCCCCGAGGAAATCCATAAAGAAATCCGCCa < 1:12077591/35‑1 (MQ=255) gCTGGCCCCGAGGAAATCCATAAAGAAATCCACCa < 1:15145256/35‑1 (MQ=255) cTGGCCCCGAGGAAATCCATAAAGAAATCCGCCAc > 1:20074319/1‑35 (MQ=255) cTGGCCCCGAGGAAATCCATAAAGAAATCCGCCAc > 1:1385258/1‑35 (MQ=255) tGGCCCCGAGGAAATCCATAAAGAAATCCGCCACt > 1:4987441/1‑35 (MQ=255) tGGCCCCGAGGAAATCCATAAAGAAATCCGCCACt > 1:14885765/1‑35 (MQ=255) tGGCCCCGAGGAAATCCATAAAGAAATCCGCCACt > 1:19025231/1‑35 (MQ=255) ggCCCCGAGGAAATCCATAAAGAAATCCGCCACtt > 1:15550226/1‑35 (MQ=255) ggCCCCGAGGAAATCCATAAAGAAATCCGCCACtt > 1:19596787/1‑35 (MQ=255) ggCCCCGAGGAAATCCATAAAGAAATCCGCCACtt > 1:6336987/1‑35 (MQ=255) ggCCCCGAGGAAATCCATAAAGAAATCCGCCACtt > 1:17534730/1‑35 (MQ=255) gCCCCGAGGAAATCCATAAAGAAATCCGCCACttt > 1:14725013/1‑35 (MQ=255) ccccGAGGAAATCCATAAAGAAATCCGCCACTTTg > 1:10368568/1‑35 (MQ=255) cccGAGGAAATCCATAAAGAAATCCGCCACTTTgc > 1:14762963/1‑35 (MQ=255) cccGAGGAAATCCATAAAGAAATCCGCCACTTTgc > 1:8302672/1‑35 (MQ=255) cccGAGGAAATCCATAAAGAAATCCGCCACTTTgc > 1:1228963/1‑35 (MQ=255) ccGAGGAAATCCATAAAGAAATCCGCCACTTTgcg > 1:15120968/1‑35 (MQ=255) ccGAGGAAATCCATAAAGAAATCCGCCACTTTgcg > 1:20159922/1‑35 (MQ=255) cGAGGAAATCCATAAAGAAATCCGCCACTTTgcgc > 1:2515401/1‑35 (MQ=255) cGAGGAAATCCATAAAGAAATCCGCCACTTTgcgc > 1:10117579/1‑35 (MQ=255) gAGGAAATCCATAAAGAAATCCGCCACTTTGCGcc > 1:1660692/1‑35 (MQ=255) aGGAAATCCATAAAGAAATCCGCCACTTTGCGccc > 1:18356654/1‑35 (MQ=255) ggAAATCCATAAAGAAATCCGCCACTTTGCGCCCt > 1:9171524/1‑35 (MQ=255) ggAAATCCATAAAGAAATCCGCCACTTTGCGCCCt > 1:1882690/1‑35 (MQ=255) ggAAATCCATAAAGAAATCCGCCACTTTGCGCCCt > 1:15704811/1‑35 (MQ=255) gaaaaTCAAAAAAAAACCCCGCCACTTTGCGCCCt < 1:322257/33‑1 (MQ=9) gAAATCCATAAAGAAATCCGCCACTTTGCGCCCTa > 1:17723311/1‑35 (MQ=255) aaaTCCATAAAGAAATCCGCCACTTTGCGCCCTAc > 1:4364647/1‑35 (MQ=255) aaaTCCATAAAGAAATCCGCCACTTTGCGCCCTAc > 1:10353245/1‑35 (MQ=255) aaaTCCATAAAGAAATCCGCCACTTTGCGCCCTAc > 1:14434324/1‑35 (MQ=255) aaaTCCATAAAGAAATCCGCCACTTTGCGCCCTAc > 1:9242762/1‑35 (MQ=255) aaTCCATAAAGAAATCCGCCACTTTGCGCCCTACt > 1:4229140/1‑35 (MQ=255) aaTCCATAAAGAAATCCGCCACTTTGCGCCCTACt > 1:13114323/1‑35 (MQ=255) aTCCATAAAGAAATCCTCCACTTTGCGCCCTACTc > 1:17252662/1‑35 (MQ=255) aTCCATAAAGAAATCCGCCACTTTGCGCCCTACTc > 1:10167100/1‑35 (MQ=255) tCCATAAAGAATTCCGCCACTTTGCGCCCTACTCg > 1:17917281/1‑35 (MQ=255) ccATAAAGAAATCCGCCACTTTGCGCCCTACTCGc > 1:5335090/1‑35 (MQ=255) caaaaaaaaaccCCGCCACTTTGCGCCCTACTCGc > 1:10663182‑M1/13‑35 (MQ=255) caaaaaaaaaccCCGCCACTTTGCGCCCTACTCGc > 1:11226143‑M1/13‑35 (MQ=255) aaaaaaaaaaccCCGCCACTTTGCGCCCTACTCGc > 1:16498765‑M1/13‑35 (MQ=255) caaaaaAAAACCCGCCACTTTGCGCCCTACTCGcc < 1:4113726/32‑1 (MQ=21) cATAAAGAAATCCGCCACTTTGCGCCCTACTCGcc > 1:19431987/1‑35 (MQ=255) aaaaaaaaaccCCGCCACTTTGCGCCCTACTCGcc > 1:8309281‑M1/12‑35 (MQ=255) aaaaaaGAAACCCGCCACTTTGCGCCCTACTCGcc < 1:9210746/32‑1 (MQ=37) ataaaaaaccCCGCCACTTTGCGCCCTACTCGccc > 1:13727478‑M1/11‑35 (MQ=255) aaaaaaaaccCCGCCACTTTGCGCCCTACTCGccc > 1:13716782‑M1/11‑35 (MQ=255) aaaaaGAACCCCGCCACTTTGCGCCCTACTCGccc < 1:1992420/33‑1 (MQ=25) aaaagaaccCCGCCACTTTGCGCCCTACTCGCCCt > 1:2322133‑M1/10‑35 (MQ=255) aaaagaaccCCGCCACTTTGCGCCCTACTCGCCCt > 1:18114667‑M1/10‑35 (MQ=255) aaaaaaaccCCGCCACTTTGCGCCCTACTCGCCCt > 1:18394381‑M1/10‑35 (MQ=255) aaaaaaccCCGCCACTTTGCGCCCTACTCGCCCtt > 1:4739356‑M1/9‑35 (MQ=255) aaaaaaacCCGCCACTTTGCGCCCTACTCGCCCtt > 1:13411492‑M1/9‑35 (MQ=255) aaaGAAATCCGCCACTTTGCGCCCTACTCGCCCtt > 1:634866/1‑35 (MQ=255) aaaGAAATCCGCCACTTTGCGCCCTACTCGCCCtt > 1:8009485/1‑35 (MQ=255) aaaGAAATCCGCCACTTTGCGCCCTACTCGCCCtt > 1:2737340/1‑35 (MQ=255) aagaaccCCGCCACTTTGCGCCCTACTCGCCCttt > 1:11346253‑M1/8‑35 (MQ=255) aagaaccCCGCCACTTTGCGCCCTACTCGCCCttt > 1:18578463‑M1/8‑35 (MQ=255) aaGAAATCCGCCACTTTGCGCCCTACTCGCCCttt > 1:5415049/1‑35 (MQ=255) aaGAAACCCGCCACTTTGCGCCCTACTCGCCCttt < 1:14149863/35‑1 (MQ=255) agaaccCCGCCACTTTGCGCCCTACTCGCCCTTTc > 1:12339635‑M1/7‑35 (MQ=255) aGAAATCCGCCACTTTGCGCCCTACTCGCCCTTTc > 1:6937996/1‑35 (MQ=255) aGAAATCCGCCACTTTGCGCCCTACTCGCCCTTTc > 1:3116965/1‑35 (MQ=255) aGAAATCCGCCACTTTGCGCCCTACTCGCCCTTTc > 1:3543029/1‑35 (MQ=255) aaaccCCGCCACTTTGCGCCCTACTCGCCCTTTCa > 1:871945‑M1/6‑35 (MQ=255) aaaacCCGCCACTTTGCGCCCTACTCGCCCTTTCa > 1:9010996‑M1/6‑35 (MQ=255) aaccCCGCCACTTTGCGCCCTACTCGCCCTTTCAg > 1:13995456‑M1/5‑35 (MQ=255) aaccCCGCCACTTTGCGCCCTACTCGCCCTTTCAg > 1:14425833‑M1/5‑35 (MQ=255) aaaTCCGCCACTTTGCGCCCTACTCGCCCTTTCAg > 1:13427963/1‑35 (MQ=255) aaaTCCGCCACTTTGCGCCCTACTCGCCCTTTCAg > 1:5775275/1‑35 (MQ=255) aaaTCCGCCACTTTGCGCCCTACTCGCCCTTTCAg > 1:18304968/1‑35 (MQ=255) aaaTCCGCCACTTTGCGCCCTACTCGCCCTTTCAg > 1:16918199/1‑35 (MQ=255) accCCGCCACTTTGCGCCCTACTCGCCCTTTCAgg > 1:6154315‑M1/4‑35 (MQ=255) accCCGCCACTTTGCGCCCTACTCGCCCTTTCAgg > 1:15854494‑M1/4‑35 (MQ=255) aaTCCGCCACTTTGCGCCCTACTCGCCCTTTCAgg > 1:3679952/1‑35 (MQ=255) aaTCCGCCACTTTGCGCCCTACTCGCCCTTTCAgg > 1:3406033/1‑35 (MQ=255) ccCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGa > 1:7259333‑M1/3‑35 (MQ=255) aTCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGa > 1:10546175/1‑35 (MQ=255) aTCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGa > 1:4642057/1‑35 (MQ=255) aTCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGa > 1:9578006/1‑35 (MQ=255) tCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGaa > 1:5622578/1‑35 (MQ=255) tCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGaa > 1:12021527/1‑35 (MQ=255) cCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGaa > 1:7706729‑M1/2‑35 (MQ=255) CCGCCACTTTGCGCCCTACTCGCCCTTTCAGGaaa > 1:8165639‑M1/1‑35 (MQ=255) CCGCCACTTTGCGCCCTACTCGCCCTTTCAGGaaa > 1:12549945‑M1/1‑35 (MQ=255) CCGCCACTTTGCGCCCTACTCGCCCTTTCAGGaaa < 1:16867054‑M1/35‑1 (MQ=255) | CCTTCGCTGGCCCCGAGGAAATCCATAAAGAAATCCGCCACTTTGCGCCCTACTCGCCCTTTCAGGAAA > REL606/2234564‑2234632 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |