New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 923960 =74 (0.720)7 (0.090) 3/36 NT 8.9% coding (1030/1431 nt) ybjT conserved protein with NAD(P)‑binding Rossmann‑fold domain
?REL606 3472589 = 88 (1.140)coding (758/879 nt) yhgA predicted transposase

Only 100 of 168 total aligned reads displayed.

AAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTGGCGGACGTTTTA  >  REL606/923926‑923994
                                  |                                  
ttggctatatgcagggctttggattgttccccctc                                    >  1:13105425‑M1/35‑35 (MQ=255)
ttggctatatgcagggctttggattgttccccctc                                    >  1:1091583‑M1/35‑35 (MQ=255)
aaaTAACGCTCTTTACCGCCGATTTGGTTCACTAc                                    >  1:10016353/1‑35 (MQ=255)
aaaTAACGCTCTTTACCGCCGATTTGGTTCACTAc                                    >  1:8202446/1‑35 (MQ=255)
 tggctatatgcagggctttggattgttccccctcc                                   <  1:2012668‑M1/2‑1 (MQ=255)
 tggctatatgcagggctttggattgttccccctcc                                   >  1:1871092‑M1/34‑35 (MQ=255)
 aaTAACGCTCTTTACCGCCGATTTGGTTCACTAcc                                   >  1:3890879/1‑35 (MQ=255)
 aaTAACGCTCTTTACCGCCGATTTGGTTCACTAcc                                   >  1:19005099/1‑35 (MQ=255)
 aaTAACGCTCTTTACCGCCGATTTGGTTCACTAcc                                   >  1:13139031/1‑35 (MQ=255)
  ggctatatggagggctttggattgttccccctcct                                  >  1:4713059‑M1/33‑35 (MQ=255)
  ggctatatgcagggctttggattgttccccctcct                                  >  1:951011‑M1/33‑35 (MQ=255)
  ggctatatgcagggctttggattgttccccctcct                                  <  1:14329965‑M1/3‑1 (MQ=255)
  ggctatatgcagggctttggattgttccccctcct                                  >  1:8321688‑M1/33‑35 (MQ=255)
  ggctatatgcagggctttggattgttccccctcct                                  >  1:10414587‑M1/33‑35 (MQ=255)
  ggctatatgcagggctttggattgttccccctcct                                  >  1:2694668‑M1/33‑35 (MQ=255)
  ggctatatgcagggctttggattgttccccctcct                                  >  1:4271255‑M1/33‑35 (MQ=255)
  ggctatatgcagggctttggattgttccccctcct                                  >  1:13596136‑M1/33‑35 (MQ=255)
  ggctatatgcagggctttggattgttcccactcct                                  >  1:11471039‑M1/33‑35 (MQ=255)
  aTAACGCTCTTTACCGCCGATTTGGTTCACTACCt                                  >  1:9381861/1‑35 (MQ=255)
  aTAACGCTCTTTACCGCCGATTTGGTTCACTACCt                                  >  1:8449132/1‑35 (MQ=255)
  aTAACGCTCTTTACCGCCGATTTGGTTCACTACCt                                  >  1:18378162/1‑35 (MQ=255)
   tAACGCTCTTTACCGCCGATTTGGTTCACTACCTg                                 >  1:14577507/1‑35 (MQ=255)
   gctatatgcagggctttggattgttccccctCCTg                                 <  1:12906323‑M1/4‑1 (MQ=255)
   gctatatgcagggctttggattgttccccctCCTg                                 >  1:5758066‑M1/32‑35 (MQ=255)
   gctatatgcagggctttggattgttccccctCCTg                                 >  1:3932150‑M1/32‑35 (MQ=255)
    ctatatgcagggctttggattgttccccctCCTGc                                <  1:6629345‑M1/5‑1 (MQ=255)
    aaCGCTCTTTACCGCCGATTTGGTTCACTACCTGc                                >  1:12622296/1‑35 (MQ=255)
     tatatgcagggctttggattgttccccctCCTGcc                               <  1:13426732‑M1/6‑1 (MQ=255)
     tatatgcagggctttggattgttccccctCCTGcc                               >  1:14664755‑M1/30‑35 (MQ=255)
     aCGCTCTTTACCGCCGATTTGGTTCACTACCTGcc                               >  1:10689125/1‑35 (MQ=255)
     aCGCTCTTTACCGCCGATTTGGTTCACTACCTGcc                               >  1:4258040/1‑35 (MQ=255)
      cGCTCTTTACCGCCGATTTGGTTCACTACCTGCCa                              >  1:4410981/1‑35 (MQ=255)
      cGCTCTTTACCGCCGATTTGGTTCACTACCTGCCa                              >  1:2035718/1‑35 (MQ=255)
        ctctTTACCGCCGATTTGGTTCACTACCTGCCATa                            >  1:17345288/1‑35 (MQ=255)
         tctTTACCGCCGATTTGGTTCACTACCTGCCATaa                           >  1:17314776/1‑35 (MQ=255)
          ctTTACCGCCGATTTGGTTCACTACCTGCCATaaa                          >  1:452736/1‑35 (MQ=255)
           tttACCGCCTATTTGGTTCACTACCTGCCATAAag                         >  1:13765329/1‑35 (MQ=255)
           tttACCGCCGATTTGGTTCACTACCTGCCATAAag                         >  1:12792438/1‑35 (MQ=255)
            ttACCGCCGATTTGGTTCACTACCTGCCATAAagc                        >  1:10283382/1‑35 (MQ=255)
            ttACCGCCGATTTGGTTCACTACCTGCCATAAagc                        >  1:12710079/1‑35 (MQ=255)
             tACCGCCGATTTGGTTCACTACCTGCCATAAagca                       >  1:13925837/1‑35 (MQ=255)
             tACCGCCGATTTGGTTCACTACCTGCCATAAagca                       >  1:10611011/1‑35 (MQ=255)
              aCCGCCGATTTGGTTCACTACCTGCCATAAagcag                      >  1:3700683/1‑35 (MQ=255)
               ccgccgATTTGGTTCACTACCTGCCATAAagcagc                     >  1:3256774/1‑35 (MQ=255)
                cgccgATTTGGTTCACTACCTGCCATAAAgcagca                    >  1:6533236/1‑35 (MQ=255)
                cgccgATTTGGTTCACTACCTGCCATAAAgcagca                    >  1:7488299/1‑35 (MQ=255)
                 gccgATTTGGTTCACTACCTGCCATAAAGCAGCaa                   >  1:8886906/1‑35 (MQ=255)
                  ccgATTTGGTTCACTACCTGCCATAAAGCAGCAAg                  >  1:13839795/1‑35 (MQ=255)
                  ccgATTTGGTTCACTACCTGCCATAAAGCAGCAAg                  >  1:4810542/1‑35 (MQ=255)
                  ccgATTTGGTTCACTACCTGCCATAAAGCAGCAAg                  >  1:5325326/1‑35 (MQ=255)
                  ccgATTTGGTTCACTACCTGCCATAAAGCAGCAAg                  >  1:3538252/1‑35 (MQ=255)
                  ccgATTTGGTTCACTACCTGCCATAAAGCAGCAAg                  >  1:940814/1‑35 (MQ=255)
                  ccgATTTGGTTCACTACCTGCCATAAAGCAGCAAg                  >  1:18260767/1‑35 (MQ=255)
                   cgATTTGGTTCACTACCTGCCATAAAGCAGCAAgg                 >  1:5442553/1‑35 (MQ=255)
                   cgATTTGGTTCACTACCTGCCATAAAGCAGCAAgg                 >  1:9131215/1‑35 (MQ=255)
                   cgATTTGGTTCACTACCTGCCATAAAGCAGCAAgg                 >  1:1150396/1‑35 (MQ=255)
                   cgATTTGGTTCACTACCTGCCATAAAGCAGCAAgg                 >  1:10191004/1‑35 (MQ=255)
                    gATTTGGTTCACTACCTGCCATAACGCAGCAAGGc                >  1:15201664/1‑35 (MQ=255)
                    gATTTGGTTCACTACCTGCCATAAAGCAGCAGGGc                >  1:7134759/1‑35 (MQ=255)
                    gATTTGGTTCACTACCTGCCATAAAGCAGCAAGGc                >  1:1514856/1‑35 (MQ=255)
                     aTTTGGTTCACTACCTGCCATAAAGCAGCAAGGCt               >  1:8980938/1‑35 (MQ=255)
                     aTTTGGTTCAATACCTGCCATAAAGCAGCAAGGCt               >  1:14058747/1‑35 (MQ=255)
                      tttGGTTCACTACCTGCCATAAAGCAGCAAGGCTg              >  1:18104844/1‑35 (MQ=255)
                      tttGGTTCACTACCTGCCATAAAGCAGCAAGGCTg              >  1:14347161/1‑35 (MQ=255)
                      tttGGTTCACTACCTGCCATAAAGCAGCAAGGCTg              >  1:7046145/1‑35 (MQ=255)
                      tttGGTTCACTACCTGCCATAAAGCAGCAAGGCTg              >  1:1630298/1‑35 (MQ=255)
                      tttGGTTCACTACCTGCCATAAAGCAGCAAGGCTg              >  1:6230229/1‑35 (MQ=255)
                      tttGGTTCACTACCTGCCATAAAGCAGCAAGGCTg              >  1:15539621/1‑35 (MQ=255)
                      tttGGTTCACTACCTGCCATAAAGCAGCAAGGCTg              >  1:13905252/1‑35 (MQ=255)
                       ttgttccccccCCTGCCATAAAGCAGCAAGGCTgg             >  1:2550920‑M1/12‑35 (MQ=255)
                       ttgttccccccCCTGCCATAAAGCAGCAAGGCTgg             >  1:2042494‑M1/12‑35 (MQ=255)
                        tGGTTCCCCCCCTGCCATAAAGCAGCAAGGCTGGc            <  1:7851895/35‑1 (MQ=21)
                         ggTTCACTACCTGCCATAAAGCAGCAAGGCTGGCg           >  1:3590403/1‑35 (MQ=255)
                          gtccccccCCTGCCATAAAGCAGCAAGGCTGGCgg          >  1:5685130‑M1/9‑35 (MQ=255)
                          gTTCACTACCTGCCATAAAGCAGCAAGGCTGGCgg          >  1:16310076/1‑35 (MQ=255)
                          gTTCACTACCTGCCATAAAGCAGCAAGGCTGGCgg          >  1:10489388/1‑35 (MQ=255)
                          gTTCACTACCTGCCATAAAGCAGCAAGGCTGGCgg          >  1:13600356/1‑35 (MQ=255)
                           ttCACTACCTGCCATAAAGCAGCAAGGCTGGCggg         >  1:10709598/1‑34 (MQ=255)
                           cccccccCCTGCCATAAAGCAGCAAGGCTGGCGGa         >  1:14856807‑M1/8‑35 (MQ=255)
                            tcccccCCTGCCATAAAGCAGCAAGGCTGGCGGAc        >  1:19774989‑M1/7‑35 (MQ=255)
                            ccccccCCTGCCATAAAGCAGCAAGGCTGGCGGAc        >  1:646292‑M1/7‑35 (MQ=255)
                             cccccCCTGCCATAAAGCAGCAAGGCTGGCGGACg       >  1:6935156‑M1/6‑35 (MQ=255)
                             cccccCCTGCCATAAAGCAGCAAGGCTGGCGGACg       >  1:517217‑M1/6‑35 (MQ=255)
                             cACTACCTGCCATAAAGCAGCAAGGCTGGCGGGCg       >  1:14365324/1‑35 (MQ=255)
                              ccccCCTGCCATAAAGCAGCAAGGCTGGCGGACGt      >  1:12968281‑M1/5‑35 (MQ=255)
                              aCTACCTGCCATAAAGCAGCAAGGCTGGCGGGCgg      >  1:11828139/1‑34 (MQ=255)
                               cccCCTGCCATAAAGCAGCAAGGCTGGCGGACGtt     >  1:7020724‑M1/4‑35 (MQ=255)
                               cccCCTGCCATAAAGCAGCAAGGCTGGCGGACGtt     >  1:4303964‑M1/4‑35 (MQ=255)
                               cccCCTGCCATAAAGCAGCAAGGCTGGCGGACGtt     >  1:4662278‑M1/4‑35 (MQ=255)
                               cccCCTGCCATAAAGCAGCAAGGCTGGCGGACGtt     >  1:17642712‑M1/4‑35 (MQ=255)
                               cccCCTGCCATAAAGCAGCAAGGCTGGCGGACGtt     >  1:7933171‑M1/4‑35 (MQ=255)
                               cTACCTGCCATAAAGCAGCAAGGCTGGGGGGCggg     >  1:4181736/1‑33 (MQ=21)
                                tACCTGCCATAAAGCAGCAAGGCTGGCGGGCGgtt    >  1:8304595/1‑35 (MQ=25)
                                ccCCTGCCATAAAGCAGCAAGGCTGGCGGACGttt    >  1:9711578‑M1/3‑35 (MQ=255)
                                ccCCTGCCATAAAGCAGCAAGGCTGGCGGACGttt    >  1:7161039‑M1/3‑35 (MQ=255)
                                 cCCTGCCATAAAGCAGCAAGGCTGGCGGACGtttt   >  1:4859544‑M1/2‑35 (MQ=255)
                                 cCCTGCCATAAAGCAGCAAGGCTGGCGGACGtttt   >  1:13047591‑M1/2‑35 (MQ=255)
                                 cCCGGCCATAAAGCAGCAAGGCTGGCGGACGtttt   >  1:20294083‑M1/2‑35 (MQ=255)
                                  ccTGCCATAAAGCAGCAAGGCTGGCGGGCGgtttt  >  1:16783739/1‑34 (MQ=25)
                                  CCTGCCATAAAGCAGCAAGGCTGGCGGACGTTTTa  >  1:4557960‑M1/1‑35 (MQ=255)
                                  |                                  
AAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTGGCGGACGTTTTA  >  REL606/923926‑923994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.