New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3809862 = | 86 (0.840) | 7 (0.100) | 4/34 | NT | 8.2% | coding (207/1503 nt) | uhpB | sensory histidine kinase in two‑component regulatory sytem with UhpA |
? | REL606 | 3882315 = | 96 (1.320) | coding (103/816 nt) | atpB | F0F1 ATP synthase subunit A |
Only 100 of 121 total aligned reads displayed.
TTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAGCACCGGCCAGTAT > REL606/3809828‑3809895 | ttAAACCGACCGCCTGCGTTAGCCAGTAAATcagc > 1:10228271/1‑35 (MQ=255) ttAAACCGACCGCCTGCGTTAGCCAGTAAATcagc > 1:15874914/1‑35 (MQ=255) tAAACCGACCGCCTGCGTTAGCCAGTAAATcagca > 1:9122592/1‑35 (MQ=255) tAAACCGACCGCCTGCGTTAGCCAGTAAATcagca > 1:8105521/1‑35 (MQ=255) aaaCCGACCGCCTGCGTTAGCCAGTAAATcagcag > 1:15681352/1‑35 (MQ=255) aaaCCGACCGCCTGCGTTAGCCAGTAAATcagcag > 1:18433955/1‑35 (MQ=255) aaaCCGACCGCCTGCGTTAGCCAGTAAATcagcag > 1:7483188/1‑35 (MQ=255) aaaCCGACCGCCTGCGTTAGCCAGTAAATcagcag > 1:11893264/1‑35 (MQ=255) aaCCGACCGCCTGCGTTAGCCAGTAAATCagcagc > 1:18109368/1‑35 (MQ=255) aaCCGACCGCCTGCGTTAGCCAGTAAATCagcagc > 1:12879612/1‑35 (MQ=255) accgaccgCCTGCGTTAGCCAGTAAATCAGCAGcc > 1:13842356/1‑35 (MQ=255) accgaccgCCTGCGTTAGCCAGTAAATCAGCAGcc > 1:10776509/1‑35 (MQ=255) accgaccgCCTGCGTTAGCCAGTAAATCAGCAGcc > 1:5419881/1‑35 (MQ=255) ccgaccgCCTGCGTTAGCCAGTAAATCAGCAGCCa > 1:7219292/1‑35 (MQ=255) ccgaccgCCTGCGTTAGCCAGTAAATCAGCAGCCa > 1:13600412/1‑35 (MQ=255) ccgaccgCCTGCGTTAGCCAGTAAATCAGCAGCCa > 1:4660197/1‑35 (MQ=255) cgatcgCCTGCGTTAGCCAGTAAATCAGCAGCCAc > 1:17810289/1‑35 (MQ=255) cgaccgCCTGCGTTAGCCAGTAAATCAGCAGCCAc > 1:14385943/1‑35 (MQ=255) cgaccgCCTGCGTTAGCCAGTAAATCAGCAGCCAc > 1:5888384/1‑35 (MQ=255) cgaccgCCTGCGTTAGCCAGTAAATCAGCAGCCAc > 1:15136655/1‑35 (MQ=255) cgaccgCCTGCGTTAGCCAGTAAATCAGCAGCCAc > 1:7747371/1‑35 (MQ=255) cgaccgCCTGCGTTAGCCAGTAAATCAGCAGCCAc > 1:8673123/1‑35 (MQ=255) gaccgCCTGCGTTAGCCAGTAAATCAGCAGCCACt > 1:14686731/1‑35 (MQ=255) gaccgCCTGCGTTAGCCAGTAAATCAGCAGCCACt > 1:14928224/1‑35 (MQ=255) gaccgCCTGCGTTAGCCAGTAAATCAGCAGCCACt > 1:10821462/1‑35 (MQ=255) gaccgCCTGCGTTAGCCAGTAAATCAGCAGCCACt > 1:3223787/1‑35 (MQ=255) accgCCTGCGTTAGCCAGTAAATCAGCAGCCACtt > 1:13238677/1‑34 (MQ=255) accgCCTGCGTTAGCCAGTAAATCAGCAGCCACTc > 1:13730317/1‑35 (MQ=255) accgCCTGCGTTAGCCAGTAAATCAGCAGCCACTc > 1:16012419/1‑35 (MQ=255) accgCCTGCGTTAGCCAGTAAATCAGCAGCCACTc > 1:8097599/1‑35 (MQ=255) ccgCCTGCGTTAGCCAGTAAATCAGCAGCCACTcc > 1:12109729/1‑35 (MQ=255) ccgCCTGCGTTAGCCAGTAAATCAGCAGCCACTcc > 1:7484669/1‑35 (MQ=255) cgCCTGCGTTAGCCAGTAAATCAGCAGCCACTCcg > 1:14372153/1‑35 (MQ=255) cgCCTGCGTTAGCCAGTAAATCAGCAGCCACTCcg > 1:14649496/1‑35 (MQ=255) cgCCTGCGTTAGCCAGTAAATCAGCAGCCACTCcg > 1:12206038/1‑35 (MQ=255) cgCCTGCGTTAGCCAGTAAATCAGCAGCCAATCcg > 1:5213488/1‑35 (MQ=255) gCCTGCGTTAGCCAGTAAATCAGCAGCCACTCcgc > 1:1998988/1‑35 (MQ=255) gCCTGCGTTAGCCAGTAAATCAGCAGCCACTCcgc > 1:17968861/1‑35 (MQ=255) gCCTGCGTTAGCCAGTAAATCAGCAGCCACTCcgc > 1:10188490/1‑35 (MQ=255) ccTGCGTTAGCCAGTAAATCAGCAGCCACTCcgcg > 1:9160659/1‑35 (MQ=255) ccTGCGTTAGCCAGTAAATCAGCAGCCACTCcgcg > 1:2370069/1‑35 (MQ=255) cTGCGTTAGCCAGTAAATCAGCGGCCACTCCgcgc > 1:1200872/1‑35 (MQ=255) cTGCGTTAGCCAGTAAATCAGCAGCCACTCCgcgc > 1:1657058/1‑35 (MQ=255) tGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGcc > 1:2468365/1‑35 (MQ=255) gCGTTAGCCAGTAAATCAGCAGCCACTCCGCGccc > 1:7693327/1‑35 (MQ=255) gCGTTAGCCAGTAAATCAGCAGCCACTCCGCGccc > 1:11651441/1‑35 (MQ=255) gCGTTAGCCAGTAAATCAGCAGCCACTCCGCGccc > 1:14877743/1‑35 (MQ=255) gCGTTAGCCAGTAAATCAGCAGCCACTCCGCGccc > 1:11766668/1‑35 (MQ=255) gCGTTAGCCAGTAAATCAGCAGCCACTCCGCGccc > 1:11650606/1‑35 (MQ=255) gCGTTAGCCAGTAAATCAGCAGCCACTCCGCGccc > 1:3712566/1‑35 (MQ=255) cGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCca > 1:7941119/1‑35 (MQ=255) gTTAGCCAGTAAATCAGCAGCCCCTCCGCGCCcag > 1:7419148/1‑35 (MQ=255) gTTAGCCAGTAAATCAGCAGCCACTCCGCGCCcag > 1:7545713/1‑35 (MQ=255) gTTAGCCAGTAAATCAGCAGCCACTCCGCGCCcag > 1:4729164/1‑35 (MQ=255) gTTAGCCAGTAAATCAGCAGCCACTCCGCGCCcag > 1:19571441/1‑35 (MQ=255) ttAGCCATTAAATCAGCAGCCACTCCGCGCCcagc > 1:5678453/1‑35 (MQ=255) ttAGCCAGTAAATCAGCAGCCACTCCGCGCCcagc > 1:14935308/1‑35 (MQ=255) ttAGCCAGTAAATCAGCAGCCACTCCGCGCCcagc > 1:15624584/1‑35 (MQ=255) tAGCCAGTAAATCAGCAGCCACTCCGCGCCcaaca > 1:6682311/1‑35 (MQ=255) aGCCAGTAAATCAGCAGCCACTCCGCGCCcagcag > 1:8762661/1‑35 (MQ=255) aGCCAGTAAATCAGCAGCCACTCCGCGCCcagcag > 1:12456401/1‑35 (MQ=255) gCCAGTAAATCAGCAGCCACTCCGCGCCCagcagc > 1:14411638/1‑35 (MQ=255) gCCAGTAAATCAGCAGCCACTCCGCGCCCagcagc > 1:3425291/1‑35 (MQ=255) gCCAGTAAATCAGCAGCCACTCCGCGCCCagcagc > 1:3618374/1‑35 (MQ=255) gCCAGTAAATCAGCAGCCACTCCGCGCCCagcagc > 1:15801426/1‑35 (MQ=255) ccaaaaaacccccCAGCCACTCCGCGCCCagcagc > 1:1683037‑M1/14‑35 (MQ=255) ccAGTAAATCAGCAGCCACTCCGCGCCCAgcagca > 1:17735701/1‑35 (MQ=255) ccAGTAAATCAGCAGCCACTCCGCGCCCAgcagca > 1:16933193/1‑35 (MQ=255) cAGTAAATCAGCAGCCACTCCGCGCCCAGCAGCAc > 1:12286008/1‑35 (MQ=255) cAGTAAATCAGCAGCCACTCCGCGCCCAGCAGCAc > 1:9467760/1‑35 (MQ=255) cAGTAAATCAGCAGCCACTCCGCGCCCAGCAGCAc > 1:5417622/1‑35 (MQ=255) cAGTAAATCAGCAGCCACTCCGCGCCCAGCAGCAc > 1:15313778/1‑35 (MQ=255) cAGTAAATCAGCAGCCACTCCGCGCCCAGCAGCAc > 1:1928634/1‑35 (MQ=255) cAGTAAATCAGCAGCCACTCCGCGCCCAGCAGCAc > 1:14361825/1‑35 (MQ=255) gaaaccccccCAGCCACTCCGCGCCCAGCAGCAcc > 1:5542116‑M1/11‑35 (MQ=255) agcaaaTCAGCAGCCACTCTGCGCCCAGCAGCAcc > 1:2739931/4‑35 (MQ=25) aGTAAATCAGCAGCCACTCCGCGCCCAGCAGCAcc > 1:13464495/1‑35 (MQ=255) gTAAATCAGCAGCCACTCCGCGCCCAGCAGCACCg > 1:8923260/1‑35 (MQ=255) gTAAATCAGCAGCCACTCCGCGCCCAGCAGCACCg > 1:19674074/1‑35 (MQ=255) gTAAATCAGCAGCCACTCCGCGCCCAGCAGCACCg > 1:6100840/1‑35 (MQ=255) tAAATCAGCAGCCACTCCGCGCCCAGCAGCACCgg > 1:15841743/1‑35 (MQ=255) tAAATCAGCAGCCACTCCGCGCCCAGCAGCACCgg > 1:16994019/1‑35 (MQ=255) tAAATCAGCAGCCACTCCGCGCCCAGCAGCACCgg > 1:13454269/1‑35 (MQ=255) tAAATCAGCAGCCACTCCGCGCCCAGCAGCACCgg > 1:5588239/1‑35 (MQ=255) tAAATCAGCAGCCACTCCGCGCCCAGCAGCACCgg > 1:7303616/1‑35 (MQ=255) aaacccccCAGCCACTCCGCGCCCAGCAGCACCgg > 1:16493296‑M1/9‑35 (MQ=255) aaacccccCAGCCACTCCGCGCCCAGCAGCACCgg > 1:5036265‑M1/9‑35 (MQ=255) aaaTCAGCAGCCACTCCGCGCCCAGCAGCAccaga > 1:3343639/1‑32 (MQ=255) aaaTCAGCAGCCACTCCGCGCCCAGCAGCACCTGc > 1:12563046/1‑35 (MQ=255) aaaTCAGCAGCCACTCCGCGCCCAGCAGCACCGGc > 1:13963501/1‑35 (MQ=255) acccccCAGCCACTCCGCGCCCAGCAGCACCGGcc > 1:7619774‑M1/7‑35 (MQ=255) aaTCAGCAGCCACTCCGCGCCCAGCAGCACCGGcc > 1:4908318/1‑35 (MQ=255) cccccCAGCCACTCCGCGCCCAGCAGCACCGGCCa > 1:2498400‑M1/6‑35 (MQ=255) cccccCAGCCACTCCGCGCCCAGCAGCACCGGCCa > 1:9302866‑M1/6‑35 (MQ=255) aTCAGCAGCCACTCCGCGCCCAGCAGCACCGGCCa > 1:2052155/1‑35 (MQ=255) tCAGCAGCCACTCCGCGCCCAGCAGCACCGGCCAg > 1:11096037/1‑35 (MQ=255) cagcagCCACTCCGCGCCCAGCAGCACCGGCCAGt > 1:14577416/1‑35 (MQ=255) ccCAGCCACCCCGCGCCCAGCAGCACCGGCCAGTa > 1:5829660‑M1/3‑35 (MQ=255) ccCAGCCACCCCGCGCCCAGCAGCACCGGCCAGTa > 1:10257085‑M1/3‑35 (MQ=255) gcagcCACTCCGCGCCCAGCAGCACCGGCCAGTAt > 1:15563469/1‑35 (MQ=255) | TTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAGCACCGGCCAGTAT > REL606/3809828‑3809895 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |