New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2926199 = | 70 (0.680) | 14 (0.180) | 5/36 | NT | 18.0% | coding (378/408 nt) | ygfX | hypothetical protein |
? | REL606 | 3944634 = | 75 (0.970) | intergenic (+23/‑124) | proM/aslB | tRNA‑Pro/predicted regulator of arylsulfatase activity |
Only 100 of 181 total aligned reads displayed.
ATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCGCCATTCAGCTTCGTCCATGC > REL606/2926165‑2926233 | ggaaagtgacgaaatgcacagaaaacaaaaaaccc > 1:3556642‑M1/35‑35 (MQ=255) atctttatctttGCGTCTCTTGTTGCAACAAAATc < 1:9486768/35‑1 (MQ=255) atctttatctttGCGTCTCTTGTTGCAACAAAATc < 1:1119547/35‑1 (MQ=255) atctttatctttGCGTCTCTTGTTGCAACAAAATc < 1:13840441/35‑1 (MQ=255) tctttatctttGCGTCTCTTGTTGCAACAAAATcc < 1:20135737/35‑1 (MQ=255) tctttatctttGCGTCTCTTGCTGCAACAAAATcc < 1:19607840/35‑1 (MQ=255) gaaagtgacgaaatgcacagaaaacaaaaaacccc > 1:9556799‑M1/34‑35 (MQ=255) gaaagtgacgaaatgcacagaaaacaaaaaacccc < 1:5552225‑M1/2‑1 (MQ=255) gaaagtgacgaaatgcacagaaaacaaaaaacccc > 1:5763161‑M1/34‑35 (MQ=255) gaaagtgacgaaatgcacagaaaacaaaaaacccc > 1:7161502‑M1/34‑35 (MQ=255) ctttatctttGCGTCTCTTGTTGCAACAAAATccg < 1:2389036/35‑1 (MQ=255) ctttatctttGCGTCTCTTGTTGCAACAAAATccg > 1:15405731/1‑35 (MQ=255) ctttatctttGCGTCTCTTGTTGCAACAAAATccg > 1:7438769/1‑35 (MQ=255) ctttatctttGCGTCTCTTGTTGCAACAAAATccg < 1:14351198/35‑1 (MQ=255) ctttatctttGCGTCTCTTGTTGCAACAAAATccg < 1:14339373/35‑1 (MQ=255) ctttatctttGCGTCTCTTGTTGCAACAAAATccg < 1:824190/35‑1 (MQ=255) ctttatctttGCGTCTCTTGTTGCAACAAAATccg > 1:8944577/1‑35 (MQ=255) aaagtgacgaaatgcacagaaaacaaaaaaccccg > 1:17941025‑M1/33‑35 (MQ=255) aaagtgacgaaatgcacagaaaacaaaaaaccccg > 1:22223‑M1/33‑35 (MQ=255) aaagtgacgaaatgcacagaaaacaaaaaaccccg > 1:14295387‑M1/33‑35 (MQ=255) aaagtgacgaaatgcacagaaaacaaaaaaccccg > 1:7968664‑M1/33‑35 (MQ=255) aaagtgacgaaatgcacagaaaacaaaaaaccccg > 1:13963036‑M1/33‑35 (MQ=255) aaagtgacgaaatgcacagaaaacaaaaaaccccg > 1:30585‑M1/33‑35 (MQ=255) aaagtgacgaaatgcacagaaaacaaaaaaccccg > 1:16661892‑M1/33‑35 (MQ=255) tttatctttGCGTCTCTTGTTGCAACAAAATccgc > 1:11968592/1‑35 (MQ=255) aagtgacgaaatgcacagaaaacaaaaaaccccgc < 1:10543739‑M1/4‑1 (MQ=255) aagtgacgaaatgcacagaaaacaaaaaaccccgc < 1:12134190‑M1/4‑1 (MQ=255) aagtgacgaaatgcacagaaaacaaaaaaccccgc > 1:18261777‑M1/32‑35 (MQ=255) ttatctttGCGTCTCTTGTTGCAACAAAATccgcc < 1:5471378/35‑1 (MQ=255) ttatctttGCGTCTCTTGTTGCAACAAAATccgcc > 1:11425284/1‑35 (MQ=255) atctttGCGTCTCTTGTTGCAACAAAATCCGCCGt > 1:13381615/1‑35 (MQ=255) atctttGCGTCTCTTGTTGCAACAAAATCCGCCGt > 1:4417801/1‑35 (MQ=255) ctttGCGTCTCTTGTTGCAACAAAATCCGCCGTaa > 1:17468178/1‑35 (MQ=255) tttGCGTCTCTTGTTGCAACAAAATCCGCCGTaaa > 1:17388042/1‑35 (MQ=255) tttGCGTCTCTTGTTGCAACAAAATCCGCCGTaaa > 1:12356850/1‑35 (MQ=255) tttGCGTCTCCTGTTGCAACAAAATCCGCCGTaaa > 1:14532327/1‑35 (MQ=255) tttGCGCCTCTTGTTGCAACAAAATCCGCCGTaaa > 1:14028931/1‑35 (MQ=255) tGCGTCTCTTGTTGCAACAAAATCCGCCTTAAATc > 1:4221407/1‑35 (MQ=255) tGCGTCTCTTGTTGCAACAAAATCCGCCGGAAATc > 1:1908357/1‑35 (MQ=255) gCGTCTCTTGTTGCAACAAAATCCGCCGTAAATcc > 1:390330/1‑35 (MQ=255) gCGTCTCTTGTTGCAACAAAATCCGCCGTAAATcc > 1:15964635/1‑35 (MQ=255) gCGTCTCTTGTTGCAACAAAATCCGCCGTAAATcc > 1:8535110/1‑35 (MQ=255) cGTCTCTTGTTGCAACAAAATCCGCCGTAAATccc > 1:13174582/1‑35 (MQ=255) cGTCTCTTGTTCCAACAAAATCCGCCGTAAATccc > 1:411699/1‑35 (MQ=255) gTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCg > 1:17709824/1‑35 (MQ=255) gTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCg < 1:12345383/35‑1 (MQ=255) tctTGTTGCAACAAAATCCGCCGTAAATCCCGCCa > 1:15980220/1‑35 (MQ=255) ctTGTTGCAACAAAATCCGCCGTAAATCCCGCCAt > 1:9234715/1‑35 (MQ=255) ctTGTTGCAACAAAATCCGCCGTAAATCCCGCCAt > 1:3445042/1‑35 (MQ=255) ttgttgCAACAAAATCCGCCGTAAATCCCGCCAtt > 1:4745237/1‑35 (MQ=255) tgttgCAACAAAATCCGCCGTAAATCCCGCCATTc > 1:583748/1‑35 (MQ=255) tgttgCAACAAAATCCGCCGTAAATCCCGCCATTc > 1:14871899/1‑35 (MQ=255) tgttgCAACAAAATCCGCCGTAAATCCCGCCATTc > 1:12069719/1‑35 (MQ=255) tgttgCAACAAAATCCGCCGTAAATCCCGCCATTc > 1:8987320/1‑35 (MQ=255) tgttgCAACAAAATCCGCCGTAAATCCCGCAATTc > 1:15915066/1‑35 (MQ=255) gttgCAACAAAATCCGCCGTAAATCCCGCCATTCa > 1:10302571/1‑35 (MQ=255) tgCAACAAAATCCGCCGTAAATCCCGCCATTCAGc > 1:16353546/1‑35 (MQ=255) gCAACAAAATCCGCCGTAAATCCCGCCATTCAGCt > 1:5160478/1‑35 (MQ=255) gCAACAAAATCCGCCGTAAATCCCGCCATTCAGCt > 1:16820340/1‑35 (MQ=255) acaaaaaaccCCGCCGTAAATCCCGCCATTCAGCt > 1:20229646‑M1/11‑35 (MQ=255) caacaaAATCCGCCGTAAATCCCGCCATTCAGCtt > 1:4588178/1‑35 (MQ=255) caacaaAATCCGCCGTAAATCCCGCCATTCAGCtt > 1:9010220/1‑35 (MQ=255) caacaaAATCCGCCGTAAATCCCGCCATTCAGCtt > 1:6786780/1‑35 (MQ=255) caaaaaaccCCGCCGTAAATCCCGCCATTCAGCtt > 1:14281889‑M1/10‑35 (MQ=255) aaaaaaaccCCGCCGTAAATCCCGCCATTCAGCtt > 1:552348‑M1/10‑35 (MQ=255) aacaaAATCCGCCGTAAATCCCGCCATTCAGCTTc > 1:12117157/1‑35 (MQ=255) aacaaAATCCGCCGTAAATCCCGCCATTCAGCTTc > 1:4934994/1‑35 (MQ=255) aaaaagccCCGCCGTAAATCCCGCCATTCAGCTTc > 1:1767606‑M1/9‑35 (MQ=255) aaaaaaacCCGCCGTAAATCCCGCCATTCAGCTTc > 1:20471068‑M1/9‑35 (MQ=255) acaaAATCCGCCGTAAATCCCGCCATTCAGCTTCg > 1:10010464/1‑35 (MQ=255) acaaAATCCGCCGTAAATCCCGCCATTCAGCTTCg > 1:19887586/1‑35 (MQ=255) aaaaaccCCGCCGTAAATCCCGCCATTCAGCTTCg > 1:18576839‑M1/8‑35 (MQ=255) aaaaaccCCGCCGTAAATCCCGCCATTCAGCTTCg > 1:15115286‑M1/8‑35 (MQ=255) caaAATCCGCCGTAAATCCCGCCATTCAGCTTCGt > 1:12517712/1‑35 (MQ=255) caaAATCCGCCGTAAATCCCGCCATTCAGCTTCGt > 1:13001239/1‑35 (MQ=255) caaAATCCGCCGTAAATCCCGCCATTCAGCTTCGt > 1:669019/1‑35 (MQ=255) aaaaccCCGCCGTAAATCCCGCCATTCAGCTTCGt > 1:11101133‑M1/7‑35 (MQ=255) aaaaccCCGCCGTAAATCCCGCCATTCAGCTTCGt > 1:19695177‑M1/7‑35 (MQ=255) aaaaaCCAGCCGTAAATCCCGCCATTCAGCTTCGt < 1:20054988/34‑1 (MQ=37) aaaaTCCGCCGTAAATCCCGCCATTCAGCTTCGTc > 1:1914131/1‑35 (MQ=255) aaaaTCCGCCGTAAATCCCGCCATTCAGCTTCGTc > 1:8801554/1‑35 (MQ=255) aaaaTCCGCCGTAAATCCCGCCATTCAGCTTCGTc > 1:13090724/1‑35 (MQ=255) acccCCGCCGTAAATCCCGCCATTCAGCTTCGTcc > 1:12932003‑M1/5‑35 (MQ=255) aaaTCCGCCGTAAATCCCGCCATTCAGCTTCGTcc > 1:2940749/1‑35 (MQ=255) aaTCCGCCTTAAATCCCGCCATTCAGCTTCGTCCa > 1:14539833/1‑35 (MQ=255) ntCCGCCGTAAATCCCGCCATTCAGCTTCGTccct > 1:7301779/2‑33 (MQ=255) ccCCGCCGTAAACCCCGCCATTCAGCTTCGTCCAt > 1:6345010‑M1/3‑35 (MQ=255) ccCCCCCGTAAATCCCGCCATTCAGCTTCGTCCAt > 1:5764306‑M1/3‑35 (MQ=255) aTCCGCCGTAAATCCCGCCATTCAGCTTCGTCCAt > 1:14885057/1‑35 (MQ=255) tCCGCCGTAAATCCCGCCATTCAGCTTCGTCCATg > 1:14072764/1‑35 (MQ=255) tCCGCCGTAAATCCCGCCATTCAGCTTCGTCCATg > 1:86455/1‑35 (MQ=255) cCCGCCGTAAATCCCGCCATTCAGCTTCGTCCATg > 1:8437052‑M1/2‑35 (MQ=255) cCCGCCGTAAATCCCGCCATTCAGCTTCGTCCATg > 1:17195392‑M1/2‑35 (MQ=255) cCCGCCGTAAATCCCGCCATTCAGCTTCGTCCATg > 1:18203178‑M1/2‑35 (MQ=255) cCCGCCGTAAACCCCGCCATTCAGCTTCGTCCATg > 1:944106‑M1/2‑35 (MQ=255) CCGCCGTAAATCCCGCCATTCAGCTTCGTCCATGc > 1:14647747‑M1/1‑35 (MQ=255) CCGCCGTAAATCCCGCCATTCAGCTTCGTCCATGc < 1:18419885‑M1/35‑1 (MQ=255) CCGCCGTAAATCCCGCCATTCAGCTTCGTCCATGc > 1:20598345‑M1/1‑35 (MQ=255) CCGCCGTAAATCCCGCCATTCAGCTTCGTCCATGc < 1:10721629‑M1/35‑1 (MQ=255) CCGCCGTAAATCCCGCCATTCAGCTTCGTCCATGc < 1:1008634‑M1/35‑1 (MQ=255) | ATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAATCCCGCCATTCAGCTTCGTCCATGC > REL606/2926165‑2926233 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |