New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 505984 = | 28 (0.270) | 12 (0.130) | 6/42 | NT | 16.8% | coding (808/816 nt) | allR | DNA‑binding transcriptional repressor |
? | REL606 | 2525727 = | 94 (1.050) | coding (4/1350 nt) | hyfD | hydrogenase 4 membrane subunit |
CGCTCCGCAGAGCGGGATGCGACAGACATTATGGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/506020‑505984 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgGGGGTTTTGTTCGCCGCACTGACCACGCTGTGCA > REL606/2525727‑2525760 CGCTCCGCAGAGCGGGATGCGACAGACATTATGGA > 1:9391750/1‑35 CGCTCCGCAGAGCGGGATGCGACAGACATTATGGA > 1:7366013/1‑35 CGCTCCGCAGAGCGGGATGCGACAGACATTATGGA > 1:6864845/1‑35 CGCTCCGCAGAGCGGGATGCGACAGACATTATGGA > 1:17444745/1‑35 CGCTCCGCAGAGCGGGATGCGACAGACATTATGGA > 1:14736025/1‑35 GCTCCGCAGAGCGGGATGCGACAGACATTATGGAT > 1:8680514/1‑35 GCTCCGCAGAGCGGGATGCGACAGACATTATGGAT > 1:6763299/1‑35 GCTCCGCAGAGCGGGATGCGACAGACATTATGGAT > 1:6055137/1‑35 GCTCCGCAGAGCGGGATGCGACAGACATTATGGAT > 1:5943802/1‑35 GCTCCGCAGAGCGGGATGCGACAGACATTATGGAT > 1:3547581/1‑35 CTCCGCAGAGCTGGATGCGACAGACATTATGGATG > 1:12254385/1‑35 CTCCGCAGAGCGGGATGCGACAGACATTATGGATG > 1:12038992/1‑35 CTCCGCAGAGCGGGATGCGACAGACATTATGGATG > 1:8224163/1‑35 CTCCGCAGAGCGGGATGCGACAGACATTATGGATG > 1:4115799/1‑35 CTCCGCAGAGCGGGATGCGACAGACATTATGGATG > 1:18536416/1‑35 TCCGCAGAGCGTGATGCGACAGACATTATGGATGG > 1:1696120/1‑35 TCCGCAGAGCGGGATGCGACAGACATTATGGATGG > 1:288511/1‑35 CCGCAGAGCGGGATGCGACAGACATTATGGATGGG > 1:17086068/1‑35 CCGCAGAGCGGGATGCGACAGACATTATGGATGGG > 1:11743136/1‑35 CGCAGAGCGGGATGCGACAGACATTATGGATGGGc > 1:18957142/1‑34 CGCAGAGCGGGATGCGACAGACATTATGGATGGGG > 1:10273900/1‑35 GCAGAGCGGGATGCGACAGACATTATGGATGGGGc > 1:13251042/1‑34 GCAGAGCGGGATGCGACAGACATTATGGATGGGGG > 1:3523611/1‑35 CAGAGCGGGATGCGACAGACATTATGGATGGGGtt > 1:15337725/1‑33 CAGAGCGGGATGCGACAGACATTATGGATGGGGGT > 1:17307965/1‑35 AGAGCGGGATGCGACAGACATTATGGATGGGGGTT > 1:12148317/1‑35 GAGCGGGATGCGACAGACATTATGGATGGGGTTTg > 1:5085824/1‑34 GAGCGGGATGCGACAGACATTATGGATGGGGTTTT > 1:14446872/1‑35 GAGCGGGATGCGACAGACATTATGGATGGGGGTTc > 1:5809194/1‑34 AGCGGGATGCGACAGACATTATGGATGGGGGTTTT > 1:11001147/1‑35 AGCGGGATGCGACAGACATTATGGATGGGGGTTTT > 1:10946807/1‑35 AGCGGGATGCGACAGACATTATGGATGGGGGTTTT > 1:12910844/1‑35 GCGGGATGCGACAGACATTATGGATGGGGGTTTTG > 1:15032790/1‑35 CGGGATGCGACAGACATTATGGATGGGGGTTTTGT > 1:3006655/1‑35 CGGGATGCGACAGACATTATGGATGGGGGTTTAGT > 1:3594940/1‑35 GGATGCGACAGACATTATGGATGGGGGTTTTGTTC > 1:4787997/1‑35 TGCGACAGACATTATGGATGGGGGTTTTGTTCcca > 1:5850326/1‑32 ATGGGGGTTTTGTTCGCCGCACTGACCACGCTGgg > 1:154244/1‑33 ATGGGGGTTTTGTTCGCCGCACTGACCACGCTGTG > 1:15838230/1‑35 ATGGGGGTTTTGTTCGCCGCACTGACCACGCTGTG < 1:10447813/35‑1 ATGGGGGTTTTGTTCGCCGCACTGACCACGCTGTG < 1:12560634/35‑1 ATGGGGGTTTTGTTCGCCGCACTGACCACGCTGTG > 1:16979533/1‑35 ATGGGGGTTTTGTTCGCCGCACTGACCACGCTGTG > 1:18201691/1‑35 ATGGGGGTTTTGTTCGCCGCACTGACCACGCTGTG > 1:4809163/1‑35 ATGGGGGTTTTGTTCGCCGCACTGACCACGCTGTG < 1:4121553/35‑1 TGGGGGTTTTGTTCGCCTCACTGACCACGCTGTGC > 1:14366095/1‑35 TGGGGGTTTTGTTCGCCGCACTGACCACGCTGTGC < 1:3352591/35‑1 TGGGGGTTTTGTTCGCCGCACTGACCACGCTGTGC < 1:10297999/35‑1 TGGGGGTTTTGTTCGCCGCACTGACCACGCTGTGC < 1:15913968/35‑1 GGGGGTTTTGTTCGCCGCACTGACCATGCTGTGCA > 1:5956644/1‑35 GGGGGTTTTGTTCGCCGCACTGACCACGCTGTGCA > 1:16769951/1‑35 GGGGGTTTTGTTCGCCGCACTGACCACGCTGTGCA < 1:1420543/35‑1 CGCTCCGCAGAGCGGGATGCGACAGACATTATGGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/506020‑505984 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgGGGGTTTTGTTCGCCGCACTGACCACGCTGTGCA > REL606/2525727‑2525760 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |