New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 365501 =115 (1.120)5 (0.060) 3/40 NT 6.1% coding (1217/1221 nt) sbmA predicted transporter
?REL606 = 3726074 57 (0.670)coding (49/1545 nt) yibO phosphoglyceromutase

TAGAGGATTGACGCGCGACATTACTTCTCCTTTTTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/365538‑365501
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagcCATAGCCATCCAGAATCACCAGTACCATAGGTTT  <  REL606/3726074‑3726041
                                                                        
TAGAGGATTGACGCGCGACATTACTTCTCCTTTTT                                       >  1:18978572/1‑35
TAGAGGATTGACGCGCGACATTACTTCTCCTTTTT                                       <  1:2944852/35‑1
TAGAGGATTGACGCGCGACATTACTTCTCCTTTTT                                       <  1:15080349/35‑1
TAGAGGATTGACGCGCGACATTACTTCTCCTTTTT                                       <  1:3131614/35‑1
TAGAGGATTGACGCGCGACATTACTTCTCCTTTTT                                       <  1:12273350/35‑1
 AGAGGATTGACGCGCGACATTACTTCTCCTTTTTA                                      <  1:15919912/35‑1
 AGAGGATTGACGCGCGACATTACTTCTCCTTTTTA                                      >  1:13801455/1‑35
 AGAGGATTGACGCGCGACATTACTTCTCCTTTTTA                                      >  1:6393761/1‑35
 AGAGGATTGACGCGCGACATTACTTCTCCTTTTTA                                      <  1:9549031/35‑1
 AGAGGATTGACGCGCGACATTACTTCTCCTTTTTA                                      >  1:10812859/1‑35
 AGAGGATTGACGCGCGACATTACTTCTCCTTTTTA                                      <  1:19449805/35‑1
  GAGGATTGACGCGCGACATTACTTCTCCTTTTTAG                                     >  1:16392312/1‑35
  GAGGATTGACGCGCGACATTACTTCTCCTTTTTAG                                     >  1:18181049/1‑35
  GAGGATTGACGCGCGACATTACTTCTCCTTTTTAG                                     >  1:9435895/1‑35
  GAGGATTGACGCGCGACATTACTTCTCCTTTTTAG                                     >  1:12203471/1‑35
   AGGATTGACGCGCGACATTACTTCTCCTTTTTAGC                                    >  1:3547082/1‑35
   AGGATTGACGCGCGACATTACTTCTCCTTTTTAGC                                    <  1:2354122/35‑1
   AGGATTGACGCGCGACATTACTTCTCCTTTTTAGC                                    >  1:7855584/1‑35
   AGGATTGACGCGCGACATTACTTCTCCTTTTTAGC                                    <  1:15744304/35‑1
   AGGATTGACGCGCGACATTACTTCTCCTTTTTAGC                                    >  1:8376228/1‑35
   AGGATTGACGCGCGACATTACTTCTCCTTTTTAGC                                    >  1:2626674/1‑35
                        TTCTCCTTTTTAGCCATAGCCATCCAGAATCACCA               <  1:2803368/35‑1
                        TTCTCCCTTTTAGCCATAGCCATCCAGAATCACCA               <  1:8333522/35‑1
                         TCTCCTTTTTAGCCATAGCCATCCAGGATCACCAG              <  1:5898566/35‑1
                          tttCTTTTTAGCCATAGCCATCCAGAATCACCAGT             <  1:15154209/32‑1
                          tttCTTTTTAGCCATAGCCATCCAGAATCACCAGT             <  1:17076010/32‑1
                          tTCCTTTTTAGCCATAGCCATCCAGAATCACCAGT             <  1:10012098/34‑1
                          CTCCTTTTTAGCCATAGCCATCCAGAATCACCAGT             <  1:8732291/35‑1
                           ttCTTTTTAGCCATAGCCATCCAGAATCACCAGTA            <  1:16048898/33‑1
                           ttCTTTTTAGCCATAGCCATCCAGAATCACCAGTA            <  1:9252627/33‑1
                           ttCTTTTTAGCCATAGCCATCCAGAATCACCAGTA            <  1:18378934/33‑1
                           tcaTTTTTAGCCATAGCCATCCAGAATCACCAGTA            <  1:9588102/32‑1
                             CTTTTTAGCCATAGCCATCCAGAATCACCAGTACC          <  1:13950441/35‑1
                               TTTTAGCCATAGCCATCCAGAATCACCAGTACCAT        <  1:6843407/35‑1
                               TTTTAGCCATAGCCATCCAGAATCACCAGTACCAT        <  1:14808048/35‑1
                               TTTTAGCCATAGCCATCCAGAATCACCAGTACCAT        <  1:11576618/35‑1
                                TTTAGCCATAGCCATCCAGAATCACCAGTACCATA       <  1:13672568/35‑1
                                 TTAGCCATAGCCATCCAGAATCACCAGTACCATAG      <  1:7234896/35‑1
                                  TAGCCATAGCCATCCAGAATCACCAGTACCATAtg     >  1:8285652/1‑33
                                  TAGCCATAGCCATCCAGAATCACCAGTACCATAGG     <  1:7437240/35‑1
                                  TAGCCATAGCCATCCAGAATCACCAGTACCATAGG     <  1:19510781/35‑1
                                  TAGCCATAGCCATCCAGAATCACCAGTACCATAGG     >  1:8422214/1‑35
                                  TAGCCATAGCAATCCAGAATCACCAGTACCATAGG     <  1:16740348/35‑1
                                   acCCATAGCCATCCAGAATCACCAGTACCATAGGT    <  1:2515620/33‑1
                                   AGCCATAGCCATCCAGAATCACCAGTACCATATGT    >  1:1893226/1‑35
                                   AGCCATAGCCATCCAGAATCACCAGTACCATAGGT    <  1:13225122/35‑1
                                   AGCCATAGCCATCCAGAATCACCAGTACCATAGGT    <  1:1925829/35‑1
                                   AGCCATAGCCATCCAGAATCACCAGTACCATAGGT    >  1:12555162/1‑35
                                   AGCCATAGCCATCCAGAATCACCAGTACCATAGGT    <  1:11883301/35‑1
                                   AGCCATAGCCATCCAGAATCACCAGTACCATAGGT    <  1:9146118/35‑1
                                   AGCCATAGCCATCCAGAATCACCAGTACCATAGGT    >  1:5823136/1‑35
                                   AGCCATAGCCATCCAGAATCACCAGTACCATAGGT    <  1:18911531/35‑1
                                   AGCCATAGCCATCCAGAATCACCAGTACCATAGGT    >  1:18537103/1‑35
                                   AGCCATAGCCATCCAGAATCACCAGTACCATAGGT    <  1:8725512/35‑1
                                    cCCATAGCCATCCAGAATCACCAGTACCATAGGTT   <  1:18265341/34‑1
                                    GCCATAGCCATCCAGAATCACCAGTACCATAGGTT   <  1:12087621/35‑1
                                    GCCATAGCCATCCAGAATCACCAGTACCATAGGTT   >  1:1536955/1‑35
                                    GCCATAGCCATCCAGAATCACCAGTACCATAGGTT   <  1:17190513/35‑1
                                    GCCATAGCCATCCAGAATCACCAGTACCATAGGTT   <  1:10806026/35‑1
                                    GCCATAGCCATCCAGAATCACCAGTACCATAGGTT   >  1:13070369/1‑35
                                    GCCATAGCCATCCAGAATCACCAGTACCATAGGTT   >  1:8672027/1‑35
                                     CCATAGCCATCCAGAATCACCAGTACCATAGGTTT  >  1:10367937/1‑35
                                     CCATAGCCATCCAGAATCACCAGTACCATAGGTTT  >  1:6745865/1‑35
                                     CCATAGCCATCCAGAATCACCAGTACCATAGGTTT  >  1:6058868/1‑35
                                     CCATAGCCATCCAGAATCACCAGTACCATAGGTTT  >  1:4676166/1‑35
                                     CCATAGCCATCCAGAATCACCAGTACCATAGGTTT  >  1:14188222/1‑35
                                     CCATAGCCATCCAGAATCACCAGTACCATAGGTTT  <  1:15183140/35‑1
                                     CCATAGCCATCCAGAATCACCAGTACCATAGGTTT  <  1:18108296/35‑1
                                     CCATAGCCATCCAGAATCACCAGTACCATAGGTTT  >  1:18226268/1‑35
                                                                        
TAGAGGATTGACGCGCGACATTACTTCTCCTTTTTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/365538‑365501
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagcCATAGCCATCCAGAATCACCAGTACCATAGGTTT  <  REL606/3726074‑3726041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.