New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1889905 | 87 (0.850) | 12 (0.130) | 5/42 | NT | 17.4% | coding (1053/1374 nt) | yebQ | predicted transporter |
? | REL606 | 2379272 = | 38 (0.420) | coding (970/1014 nt) | usg | hypothetical protein |
Only 100 of 166 total aligned reads displayed.
GGTTGTTCATCATGGCT‑GCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATA > REL606/1889871‑1889939 | ggTTGTTCATCATGGCT‑GCGGGGCTTTTTTCCCTG < 1:3070340‑M1/35‑1 (MQ=255) gttgttCATCATGGCTGGGGGGGTTTTTTTCCCTg > 1:15862005/1‑35 (MQ=19) ttgttCATCATGGCT‑GCGGGGCTTTTTTCCCTGGt < 1:6434714/35‑1 (MQ=255) tgttCATCATGGCT‑GCGGGGCTTTTTTCCCTGGtt < 1:5714139/35‑1 (MQ=255) gttCATCATGGCT‑GCGGGGCTTTTTTCCCTGGTTc < 1:12715300/35‑1 (MQ=255) ttCATCATGGCT‑GCGGGGCTTTTTTTCCTGGTTcc > 1:13460193/1‑34 (MQ=255) ttCATCATGGCT‑GCGGGGCTTTTTTCCCTGGTTct < 1:3377282/35‑1 (MQ=255) tcatcaTGGCT‑GCGGGGCTTTTTTCCCTGGTTctg < 1:8068421/35‑1 (MQ=255) tcatcaTGGCT‑GCGGGGCTTTTTTCCCTGGTTctg < 1:19473033/35‑1 (MQ=255) catcatGGCT‑GAGGGGCTTTTTTCCCTGGTTctgc < 1:14832979/35‑1 (MQ=255) atcatGGCT‑GCGGGGCTTTTTTCCCTGGTTctgct < 1:9257443/35‑1 (MQ=255) atcatGGCT‑GCGGGGCTTTTTTCCCTGGTTctgct < 1:6456616/35‑1 (MQ=255) atcat‑GCT‑GCGGGGCTTTTTTCCCTGGTTctgctg > 1:4319062/1‑35 (MQ=37) tcatGGCT‑GCGGGGCTTTTTTCCCTGGTTctgctg < 1:10076882/35‑1 (MQ=255) tcatGGCT‑GCGGGGCTTTTTTCCCTGGTTctgctg < 1:15358525/35‑1 (MQ=255) tcatGGCT‑GCGGGGCTTTTTTCACTGGTTctgctg < 1:143185/35‑1 (MQ=255) catGGCT‑GCGGGGCTTTTTTCCCTGGTTCtgctgc < 1:3417247/35‑1 (MQ=255) atGGCT‑GCGGGGCTTTTTTCCCTGGTTCTGCTGcc < 1:494486/35‑1 (MQ=255) atGGCT‑GCGGGGCTTTTTTCCCTGGTTCTGCTGcc < 1:10061502/35‑1 (MQ=255) tGGCT‑GCGTGGCTTTTTTCCCTGGTTCTGCTGccc < 1:14682537/35‑1 (MQ=255) tGGCT‑GCGGGGCTTTTTTCCCTGGGTCTGCTGccc > 1:14654822/1‑35 (MQ=255) ggCT‑GCGGGGCTTTTTTGCCTGGTTCTGCTGCCcg < 1:12684795/35‑1 (MQ=255) ggCT‑GCGGGGCTTTTTTCCCTGGTTCTGCTGCCcg < 1:18288725/35‑1 (MQ=255) ggCT‑GCGGGGCTTTTTTCCCTGGTTCTGCTGCCcg > 1:16250041/1‑35 (MQ=255) ggCT‑GCGGGGCTTTTTTCCCTGGTTCTGCTGCCcg < 1:6205193/35‑1 (MQ=255) gCT‑GCGGGGCTTTTTTCCCTGGTTCTGCTGGCcgc < 1:13174008/35‑1 (MQ=255) gCT‑GCGGGGCTTTTTTCCCTGGTTCTGCTGCCcgc < 1:11179178/35‑1 (MQ=255) cT‑GCGGGGCTTTTTTCCCTGGTTCTGCTGCCcgcg > 1:12802473/1‑35 (MQ=255) cT‑GCGGGGCTTTTTTCCCTGGTTCTGCTGCCcgcg < 1:5272245/35‑1 (MQ=255) cT‑GCGGGGCTTTTTTCCCTGGTTCTGCTGCCcgcg > 1:3542432/1‑35 (MQ=255) gCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTc < 1:18128792/35‑1 (MQ=255) gCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTc > 1:17776830/1‑35 (MQ=255) gCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTc < 1:17245119/35‑1 (MQ=255) gCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTc < 1:16216384/35‑1 (MQ=255) cGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCa > 1:4592889/1‑35 (MQ=255) cGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCa > 1:7844174/1‑35 (MQ=255) cGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCa > 1:15966380/1‑35 (MQ=255) cGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCa < 1:20574069/35‑1 (MQ=255) gggCTTTTTTCCATGGTTCTGCTGCCCGCGTCAcc < 1:15320425/35‑1 (MQ=255) gggttttttcccTGccatcagcgcgccgccaaagc < 1:8997447‑M1/32‑22 (MQ=255) ggCTTTTTTCCCTGccatcagcgcgccgccaaagc < 1:5650751‑M1/35‑22 (MQ=255) ggCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCt < 1:11479158/35‑1 (MQ=255) ggCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCt > 1:10383211/1‑35 (MQ=255) ggCTTTTTTCCCTGGTTCTGATGCCCGCGTCACCt < 1:13799402/35‑1 (MQ=255) gCTTTTTTCCCTGccatcagcgcgccgccaaagcg < 1:1300602‑M1/35‑23 (MQ=255) gCTTTTTTCCCTGccatcagcgcgcagccaaagcg < 1:13900200‑M1/35‑23 (MQ=255) gCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTg < 1:19159411/35‑1 (MQ=255) gCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTg < 1:3897350/35‑1 (MQ=255) cTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGc > 1:8177749/1‑35 (MQ=255) cTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGc < 1:10641186/35‑1 (MQ=255) cTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGc < 1:18663470/35‑1 (MQ=255) cTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGc > 1:8484662/1‑35 (MQ=255) ttttttTCCTGccatcagcgcgccgccaaagcgaa < 1:4676770‑M1/35‑25 (MQ=255) ttttttCCCTGGTTCTGCTGCCCGCGTCACCTGCg > 1:19220583/1‑35 (MQ=255) ttttttCCCTGGTTCTGCTGCCCGCGTCACCTGCg < 1:16048139/35‑1 (MQ=255) tttttCCCTGccatcagcgcgccgccaaagcgaac < 1:7328979‑M1/35‑26 (MQ=255) tttttCCCTGGTTCTGCTGCCCGCGTCACCTGCgg < 1:15040330/35‑1 (MQ=255) tttttCCCTGGTTCTGCTGCCCGCGTCACCTGCgg < 1:15896960/35‑1 (MQ=255) tttttCCCTGGTTCTGCTGCCCGCGTCACCTGCgg < 1:5119243/35‑1 (MQ=255) tttttCCCTGGTTCTGCTGCCCGCGTCACCTGCgg > 1:13973805/1‑35 (MQ=255) ttttCCCTGccatcagcgcgccgccaaagcgaacg < 1:16873137‑M1/35‑27 (MQ=255) ttttCCCTGccatcagcgcgccgccaaagcgaacg < 1:15476900‑M1/35‑27 (MQ=255) ttttCCCTGGTTCTGCTGCCCGCGTCACCTGCGGa > 1:16541303/1‑35 (MQ=255) ttttCCCTGGTTCTGCTGCCCGCGTCACCTGCGGa > 1:5043743/1‑35 (MQ=255) tttCCCTGccatcagcgcgccgccaaagcgaacgt < 1:7138812‑M1/35‑28 (MQ=255) tttCCCTGGTTCTGCTGCCCGCGTCACCTGCGGat > 1:10123895/1‑35 (MQ=255) ttCCCTGccatcagcgcgccgccaaagcgaacgtt < 1:9634183‑M1/35‑29 (MQ=255) ttCCCTGGTTCTGCTGCCCGCGTCACCTGCGGata > 1:17142009/1‑35 (MQ=255) ttCCCTGGTTCTGCTGCCCGCGTCACCTGCGGata > 1:15513274/1‑35 (MQ=255) ttCCATGGTTCTGCTGCCCGCGTCACCTGCGGata < 1:5750797/35‑1 (MQ=255) tCCCTGGTTCTGCTGCCCGCGTCACCTGCGGatat > 1:18954918/1‑35 (MQ=255) tCCCTGGTTCTGCTGCCCGCGTCACCTGCGGatat > 1:17626316/1‑35 (MQ=255) accctGccatcagcgcgccgccaaagcgaacgtta < 1:11081078‑M1/34‑30 (MQ=255) cccTGGTTCTGCTGCCCGCGTCACCTGCGGATATc < 1:19687354/35‑1 (MQ=255) cccTGGTTCTCCTGCCCGCGTCACCTGCGGATATc < 1:15809066/35‑1 (MQ=255) ccTGccatcagcgcgccgccaaagcgaacgttatc < 1:11349244‑M1/35‑32 (MQ=255) ccTGccatcagcgcgccgccaaagcgaacgttatc < 1:8993298‑M1/35‑32 (MQ=255) ccTGGTTCTGCTGCCCGCGTCCCCTGCGGATATCa > 1:20303227/1‑35 (MQ=255) ccTGGTTCTGCTGCCCGCGTCACCTGCGGATATCa > 1:2352960/1‑35 (MQ=255) ccTGGTTCTGCTGCCCGCGTCACCTGCGGATATCa < 1:5448801/35‑1 (MQ=255) ccTGGTTCTGCTGCCCGCGTCACCTGCGGATATCa > 1:9934511/1‑35 (MQ=255) cTGccatcagcgcgccgccaaagcgaacgttatcg > 1:14095834‑M1/1‑3 (MQ=255) cTGccatcagcgcgccgccaaagcgaacgttatcg < 1:3037976‑M1/35‑33 (MQ=255) cTGGTTCTGCTGCCCGCTTCACCTGCGGATATCaa > 1:5751869/1‑35 (MQ=255) cTGGTTCTGCTGCCCGCGTCACCTGCGGATATCaa > 1:13927928/1‑35 (MQ=255) cTGGTTCTGCTGCCCGCGTCACCTGCGGATATCaa < 1:9626914/35‑1 (MQ=255) cTGGTTCTGCTGCCCGCGTCACCTGCGGATATCaa > 1:10551677/1‑35 (MQ=255) cTGGTTCTGCTGCCCGCGTCACCTGCGGATATCaa < 1:10820846/35‑1 (MQ=255) tGccatcagcgcgccgccaaagcgaacgttatcgg > 1:3229861‑M1/1‑2 (MQ=255) tGccatcagcgcgccgccaaagcgaacgttatcgg < 1:18630399‑M1/35‑34 (MQ=255) tGccatcagcgcgccgccaaagcgaacgttatcgg < 1:15609270‑M1/35‑34 (MQ=255) tGccaccagcgcgccgccaaagcgaacgttatcgg < 1:20603326‑M1/35‑34 (MQ=255) tGGTTCTGCTGCCCGCGTCACCTGCGGATATCAat < 1:6937131/35‑1 (MQ=255) tGGTTCTGCTGCCCGCGTCACCTGCGGATATCAat > 1:17451997/1‑35 (MQ=255) ggTTCTGCTGCCCGCGTCACCTGCGGATATCAata < 1:19890464/35‑1 (MQ=255) ggTTCTGCTGCCCGCGTCACCTGCGGATATCAata < 1:10141132/35‑1 (MQ=255) ggTTCTGCTGCCCGCGTCACCTGCGGATATCAata < 1:18445671/35‑1 (MQ=255) ggTTCTGCTGCCCGCGTCACCTGCGGATATCAata > 1:11112545/1‑35 (MQ=255) ggTTCTGCTGCCCGCGTCACCTGCGGATATAAata < 1:3776483/35‑1 (MQ=255) gccatcagcgcgccgccaaagcgaacgttatcggc > 1:11999660‑M1/1‑1 (MQ=255) | GGTTGTTCATCATGGCT‑GCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATA > REL606/1889871‑1889939 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |