Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 554,617 | 0 | T→G | 100.0% | 0.2 | 3 | V926G (GTG→GGG) | ECB_00512 | putative tail component of prophage |
Rejected: E-value exceeds prediction threshold. | ||||||||||
Reads supporting (aligned to +/- strand): new base (2/0): ref base (1/0): total (3/0) |
CCCACAGCAAGTATCAGCGATTTGCTGGTTGTGGTGATGA > REL606/554586‑554625 | cccACAGCAAGTATCAGCGATTTGCTGGTTggggg > 1:332519/1‑34 (MQ=0) ccACAGCAAGTATCAGCGATTTGCTGGTTgggggg > 1:17227908/1‑33 (MQ=1) ccACAGCAAGTATCAGCGATTTGCTGGTTgggggg > 1:2253049/1‑33 (MQ=1) ccACAGCAAGTATCAGCGATTTGCTGGTTgggggg > 1:2854147/1‑33 (MQ=1) cacaGCAAGTATCAGCGATTTGCTGGTTggggggg > 1:12016303/1‑32 (MQ=1) cacaGCAAGTATCAGCGATTTGCTGGTTggggggg > 1:19677567/1‑32 (MQ=1) cacaGCAAGTATCAGCGATTTGCTGGTTGGGGgga > 1:20461628/1‑35 (MQ=1) acaGCAAGTATCAGCGATTTGCTGGTTGTGGggaa > 1:952510/1‑34 (MQ=0) acaGCAAGTATCAGCGATTTGCTGGTTGGGGggag > 1:12215634/1‑34 (MQ=1) aGCAAGTATCAGCGATTTGCTGGTTGGGGggaatg > 1:14980487/1‑32 (MQ=1) | CCCACAGCAAGTATCAGCGATTTGCTGGTTGTGGTGATGA > REL606/554586‑554625 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |