New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2881323 | 43 (0.420) | 10 (0.130) | 4/36 | NT | 12.7% | coding (855/1230 nt) | yqeG | predicted transporter |
? | REL606 | 3882315 = | 105 (1.360) | coding (103/816 nt) | atpB | F0F1 ATP synthase subunit A |
ATCGGCGCTTTCTATGCTGCCGAACGCCCCAGCATGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2881284‑2881323 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgGGGGGTTTTGTGG > REL606/3882315‑3882327 ATCGGCGCTTTCTATGCTGCCGAACGCCCCAGCAT < 1:20528264/35‑1 ATCGGCGCTTTCTATGCTGCCGAACGCCCCAGCAT < 1:7080317/35‑1 ATCGGCGCTTTCTATGCTGCCGAACGCCCCAGCAT < 1:8083916/35‑1 cCGGCGCTTTCTATGCTGCCGAACGCCCCAGCATG < 1:14560515/34‑1 TCGGCGCTTTCTTTGCTGCCGAACGCCCCAGCATG < 1:11712440/35‑1 CGGCGCTTTCTATGCTGCCGAACGCCCCAGCATGG > 1:9118269/1‑35 CGGCGCTTTCTATGCTGCCGAACGCCCCAGCATGG < 1:20126825/35‑1 CGGCGCTTTCTATGCTGCCGAACGCCCCAGCATGG > 1:6510282/1‑35 CGGCGCTTTCTATGCTGCCGAACGCCCCAGCATGG < 1:8199643/35‑1 GGCGCTTTCTATGCTGCCGAACGCCCCAGCATTGC > 1:5773840/1‑35 GGCGCTTTCTATGCTGCCGAACGCCCCAGCATGGC > 1:5548292/1‑35 GGCGCTTTCTATGCTGCCGAACGCCCCAGCATGGC < 1:14698435/35‑1 GGCGCTTTCTATGCTGCCGAACGCCCCAGCATGGC < 1:9589305/35‑1 GGCGCTTTCTATGCTGCAGAACGCCCCAGCATGGC < 1:14544215/35‑1 GCGCTTTCTATGCTGCCGAACGCCCCAGCATGGCT > 1:5422880/1‑35 GCGCTTTCTATGCTGCCGAACGCCCCAGCATGGCT < 1:459936/35‑1 GCGCTTTCTATGCTGCCGAACGCCCCAGCATGGCT < 1:4431815/35‑1 GCGCTTTCTATGCTGCCGAACGCCCCAGCATGGCT > 1:10295869/1‑35 GCGCTTTCTATGCTGCCGAACGCCCCAGCATGGCT < 1:20093869/35‑1 GCGCTTTCTATGCTGCCGAACGCCCCAGCATGGCT < 1:1303439/35‑1 GCGCTTTCTATGCTGCCGAACGCCCCAGCATGGCT > 1:18666267/1‑35 GCGCTTTCTATGCTGCCGAACGCCCCAGCATGGCT < 1:8784246/35‑1 GCGCTTTCTATGCTGCCGAACGCCCCAGCATGGCT < 1:16446087/35‑1 CGCTTTCTATGCTGCCGAACGCCCCAGCATGGCTG < 1:13485244/35‑1 CGCTTTCTATGCTGCCGAACGCCCCAGCATGGCTG < 1:8176615/35‑1 CGCTTTCTATGCTGCCGAACGCCCCAGCATGGCTG > 1:16622793/1‑35 CGCTTTCTATGCTGCCGAACGCCCCAGCATGGCTG > 1:15975265/1‑35 CGCTTTCTATGCTGCCGAACGCCCCAGCATGGCTG < 1:8473964/35‑1 CGCTTTCTATGCTGCCGAACGCCCCAGCATGGCTG < 1:15324657/35‑1 GCTTTCTATGCTGCCGAACGCCCCAGCATGGCTGG > 1:13255920/1‑35 GCTTTCTATGCTGCCGAACGCCCCAGCATGGCTGG > 1:19842002/1‑35 GCTTTCTATGCTGCCGAACGCCCCAGCATGGCTGG > 1:11502783/1‑35 GCTTTCTATGCTGCCGAACGCCCCAGCATGGCTGG > 1:11460935/1‑35 GCTTTCTATGCTGCCGAACGCCCCAGCATGGCTGG > 1:4999300/1‑35 CTTTCTATGCTGCCGAACGCCCCAGCATGGCTGGG > 1:19209049/1‑35 TTTCTATGCTGCCGAACGCCCCAGCATGGCTGGGG > 1:3615120/1‑35 CTATGCTGCCGAACGCCCCAGCATGGCTGGGGGGT > 1:1728966/1‑35 CTATGCTGCCGAACGCCCCAGCATGGCTGGGGGGT > 1:13872137/1‑35 TATGCTGCCGAACGCCCCAGCATGGCTGGGGGTTT > 1:18111616/1‑35 TATGCTGCCGAACGCCCCAGCATGGCTGGGGGTTT > 1:10238695/1‑35 ATGCTGCCGAACGCCCCAGCATGGCTGGGGGTTTT > 1:11357587/1‑35 ATGCTGCCGAACGCCCCAGCATGGCTGGGGGGTTT > 1:7373631/1‑35 ATGCTGCCGAACGCCCCAGCATGGCTGGGGGGGTT > 1:18690715/1‑35 TGCTGCCGAACGCCCCAGCATGGCTGGGGGGTTTc > 1:15954982/1‑34 GCTGCCGAACGCCCCAGCATGGCTGGGGGGTTTcc > 1:19061584/1‑33 GCCGAACGCCCCAGCATGGCTGGGGGGTTTTGGGG > 1:6219193/1‑35 ATCGGCGCTTTCTATGCTGCCGAACGCCCCAGCATGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2881284‑2881323 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgGGGGGTTTTGTGG > REL606/3882315‑3882327 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |