New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 293737 = | 51 (0.500) | 8 (0.090) | 4/40 | NT | 11.3% | intergenic (+7/‑520) | ykgD/ykgE | predicted DNA‑binding transcriptional regulator/predicted oxidoreductase |
? | REL606 | = 1036069 | 83 (0.970) | intergenic (+41/+35) | ycbG/ompA | hypothetical protein/outer membrane protein A (3a;II*;G;d) |
Only 100 of 116 total aligned reads displayed.
GGAAAGGGTCAGACAGCTTGCACCCTGAATAAAACCGCCAGAAATCAGGGCAAAGATAATCCGCATTCC > REL606/293703‑293771 | ggAAAGGTTCAGACAGCTTGCACCCTGAATAAAAc < 1:10445381/35‑1 (MQ=255) ggAAAGGGTCAGACAGCTTGCACCCTGAATAAAAc < 1:19956607/35‑1 (MQ=255) ggAAAGGGTCAGACAGCTTGCACCCTGAATAAAAc < 1:12382732/35‑1 (MQ=255) ggAAAGGGTCAGACAGCTTGCACCCTGAATAAAAc < 1:7633528/35‑1 (MQ=255) ggAAAGGGTCAGACAGCTTGCACCCTGAATAAAAc > 1:108160/1‑35 (MQ=255) aagtcagttcaatttactaaaggcaaaaaaaaccc > 1:15416460‑M1/35‑35 (MQ=255) aagtcagttcaatttactaaaggcaaaaaaaaccc > 1:8127690‑M1/35‑35 (MQ=255) aagtcagttcaatttactaaaggcaaaaaaaaccc < 1:15387150‑M1/1‑1 (MQ=255) aagtcagttcaatttactaaaggcaaaaaaaaccc < 1:15252871‑M1/1‑1 (MQ=255) gAAAGGGTCAGACAGCTTGCACCCTGAATAAAAcc < 1:2746971/35‑1 (MQ=255) gAAAGGGTCAGACAGCTTGCACCCTGAATAAAAcc < 1:17181215/35‑1 (MQ=255) gAAAGGGTCAGACAGCTTGCACCCTGAATAAAAcc < 1:1853774/35‑1 (MQ=255) gAAAGGGTCAGACAGCTTGCACCCTGAATAAAAcc < 1:7314301/35‑1 (MQ=255) gtcagttcaatttactaaaggcaaaaaaaaccCCg > 1:11359193‑M1/33‑35 (MQ=255) gtcagttcaatttactaaaggcaaaaaaaaccCCg < 1:1575650‑M1/3‑1 (MQ=255) gtcagttcaatttactaaaggcaaaaaaaaccCCg > 1:8008890‑M1/33‑35 (MQ=255) aaaTGGTCAGACAGCTTGCACCCTGAATAAAACCg > 1:8014576/1‑35 (MQ=255) aaaGTGTCAGACAGCTTGCACCCTGAATAAAACCg > 1:12475002/1‑35 (MQ=255) aaaGGGTCAGACAGCTTGCACCCTGAATAAAACCg > 1:3177503/1‑35 (MQ=255) aaaGGGTCAGACAGCTTGCACCCTGAATAAAACCg > 1:4132910/1‑35 (MQ=255) aaaGGGTCAGACAGCTTGCACCCTGAATAAAACCg < 1:19864135/35‑1 (MQ=255) tcagttcaatttactaaaggcaaaaaaaaccCCGc > 1:16955710‑M1/32‑35 (MQ=255) tcagttcaatttactaaaggcaaaaaaaaccCCGc > 1:7378951‑M1/32‑35 (MQ=255) tcagttcaatttactaaaggcaaaaaaaaccCCGc > 1:12730396‑M1/32‑35 (MQ=255) aaGGGTCAGACAGCTTGCACCCTGAATAAAACCGc > 1:18386110/1‑35 (MQ=255) aGGGTCAGACAGCTTGCACCCTGAATAAAACCGcc > 1:14381637/1‑35 (MQ=255) gTCAGACAGCTTGCACCCTGAATAAAACCGCCAGa > 1:19752233/1‑35 (MQ=255) gTCAGACAGCTTGCACCCTGAATAAAACCGCCAGa > 1:95625/1‑35 (MQ=255) gTCAGACAGCTTGCACCCTGAATAAAACCGCCAGa > 1:15733768/1‑35 (MQ=255) gTCAGACAGCTTGAACCCTGAATAAAACCGCCCGa > 1:11949879/1‑35 (MQ=25) tCAGACAGCTTGCACCCTGAATAAAACCGCCAGaa > 1:308668/1‑35 (MQ=255) tCAGACAGCTTGCACCCTGAATAAAACCGCCAGaa > 1:11330340/1‑35 (MQ=255) cAGACAGCTTGCACCCTGGATAAAACCGCCAGaaa > 1:20321671/1‑35 (MQ=255) cAGACAGCTTGCACCCTGAATAAAACCGCCAGaaa > 1:14412326/1‑35 (MQ=255) cAGACAGCTTGCACCCTGAATAAAACCGCCAGaaa > 1:3797317/1‑35 (MQ=255) cAGACAGCTTGCACCCTGAATAAAACCGCCAGaaa > 1:16714482/1‑35 (MQ=255) aGACAGCTTGCACCCTGAATAAAACCGCCAGAAAt > 1:2524512/1‑35 (MQ=255) aGACAGCTTGCACCCTGAATAAAACCGCCAGAAAt > 1:7144761/1‑35 (MQ=255) gACAGCTTGCACCCTGAATAAAACCGCCAGAAATc > 1:11963518/1‑35 (MQ=255) aCAGCTTGCACCCTGAATAAAACCGCCAGAAATCa > 1:3359375/1‑35 (MQ=255) aCAGCTTGCACCCTGAATAAAACCGCCAGAAATCa > 1:276746/1‑35 (MQ=255) aCAGCTTGCACCCTGAATAAAACCGCCAGAAATCa > 1:15264958/1‑35 (MQ=255) aCAGCTTGCACCCTGAATAAAACCGCCAGAAATCa > 1:3437260/1‑35 (MQ=255) cAGCTTGCACCCTGAATAAAACCGCCAGAAATCAg > 1:13029628/1‑35 (MQ=255) aGCTTGCACCCTGAATAAAACCGCCAGCAATCAgg > 1:19757021/1‑35 (MQ=255) aGCTTGCACCCTGAATAAAACCGCCAGAAATCAgg > 1:8441981/1‑35 (MQ=255) cTTGCACCCTGAATAAAACCGCCAGAAATCAGGGc > 1:7798579/1‑35 (MQ=255) cTTGCACCCTGAATAAAACCGCCAGAAATCAGGGc > 1:15086481/1‑35 (MQ=255) cTTGCACCCTGAATAAAACCGCCAGAAATCAGGGc > 1:16697932/1‑35 (MQ=255) cTTGCACCCTGAATAAAACCGCCAGAAATCAGGGc > 1:10452539/1‑35 (MQ=255) ttGCACCCTGAATAAAACCGCCAGAAATCAGGGCa > 1:12815542/1‑35 (MQ=255) tGCACCCTGAATAAAACCGCCAGAAATCAGGGCaa > 1:8168579/1‑35 (MQ=255) gCACCCTGAATAAAACCGCCAGAAATCAGGGCaaa > 1:9535365/1‑35 (MQ=255) cACCCTGAATAAAACCGCCAGAAATCAGGGCAAAg > 1:10587179/1‑35 (MQ=255) aCCCTGAATAAAACCGCCAGAAATCAGTGCAAAGa > 1:12735174/1‑35 (MQ=255) cccTGAATAAAACCGCCAGAAATCAGGGCAAAGAt > 1:18075004/1‑35 (MQ=255) cccTGAATAAAACCGCCAGAAATCAGGGCAAAGAt > 1:12037997/1‑35 (MQ=255) ccaaaaaaacccCCGCCAGAAATCAGGGCAAAGAt > 1:6125878‑M1/13‑35 (MQ=255) ccTGAATAAAACCGCCAGAAATCAGGGCAAAGATa > 1:10539591/1‑35 (MQ=255) caaaaaaaaccCCGCCAGAAATCAGGGCAAAGATa > 1:4744627‑M1/12‑35 (MQ=255) cTGAATAAAACCGCCAGAAATCAGGGCAAAGATaa > 1:8736246/1‑35 (MQ=255) cTGAATAAAACCGCCAGAAATCAGGGCAAAGATaa > 1:4714666/1‑35 (MQ=255) cgAATAAAACCGCCAGAAATCAGGGCAAAGATAAt > 1:15892764/2‑35 (MQ=255) cgAATAAAACCGCCAGAAATCAGGGCAAAGATAAt > 1:5847292/2‑35 (MQ=255) aaaacaaccCCGCCAGAAATCAGGGCAAAGATAAt > 1:12502367‑M1/10‑35 (MQ=255) aaaaaacccCCGCCAGAAATCAGGGCAAAGATAAt > 1:10405087‑M1/10‑35 (MQ=255) aaaaaaaccCCGCCAGAAATCAGGGCAAAGATAAt > 1:798993‑M1/10‑35 (MQ=255) aaaaaaaccCCGCCAGAAATCAGGGCAAAGATAAt > 1:19861292‑M1/10‑35 (MQ=255) gAATAAAACCGCTAGAAATCAGGGCAAAGATAATc > 1:11609375/1‑35 (MQ=255) gAATAAAACCGCCAGAAATCAGGGCAAAGATAATc > 1:15922435/1‑35 (MQ=255) aaaaacccCCGCCAGAAATCAGGGCAAAGATAATc > 1:18002812‑M1/9‑35 (MQ=255) aaTAAAACCGCCAGAAATCAGGTCAAAGATAATcc > 1:4309782/1‑35 (MQ=255) aaTAAAACCGCCAGAAATCAGGGCAAAGATAATcc > 1:14754982/1‑35 (MQ=255) aaTAAAACCGCAAGAAATCAGGGCAAAGATAATcc < 1:1448922/35‑1 (MQ=255) aaTAAAACCGCAAGAAATCAGGGCAAAGATAATcc < 1:5673802/35‑1 (MQ=255) aTAAAACCGCCAGAAATCAGGGCAAAGATAAtaga > 1:7845770/1‑32 (MQ=255) tAAAACCGCCAGAAATCAGGGCAAAGATAATCCGc > 1:3497071/1‑35 (MQ=255) tAAAACCGCCAGAAATCAGGGCAAAGATAATCCGc > 1:2226633/1‑35 (MQ=255) tAAAACCGCCAGAAATCAGGGCAAAGATAATCCGc > 1:16027972/1‑35 (MQ=255) cacccCCGCCAGAAATCAGGGCAAAGATAATCCGc > 1:1473895‑M1/6‑35 (MQ=255) aaaccCCGCCAGAAATCAGGGCAAAGATAATCCGc > 1:9734677‑M1/6‑35 (MQ=255) aaccCCGCCAGAAATCAGGGCAAAGATAATCCGCa > 1:2840900‑M1/5‑35 (MQ=255) aaaaCCGCCAGAAATCAGGGCAAAGATAATCCGCa > 1:4064340/1‑35 (MQ=255) aaaaCCGCCAGAAATCAGGGCAAAGATAATCCGCa > 1:2850709/1‑35 (MQ=255) cccCCGCCAGAAATCAGGGCAAAGATAATCCGCAt > 1:7574261‑M1/4‑35 (MQ=255) cccCCGCCAGAAATCAGGGCAAAGATAATCCGCAt > 1:15827481‑M1/4‑35 (MQ=255) cccCCGCCAGAAATCAGGGCAAAGATAATCCGCAt > 1:10260297‑M1/4‑35 (MQ=255) aaaCCGCCAGAAATCAGGGCAAAGATAATCCGCAt > 1:17117663/1‑35 (MQ=255) ccCCGCCAGAAATCAGGGCAAAGATAATCCGCAtt > 1:689295‑M1/3‑35 (MQ=255) ccCCGCCAGAAATCAGGGCAAAGATAATCCGCAtt > 1:5973977‑M1/3‑35 (MQ=255) ccCCGCCAGAAATCAGGGCAAAGATAATCCGCAtt > 1:17528658‑M1/3‑35 (MQ=255) acCCGCCAGAAATCAGGGCAAAGATAATCCGCAtt > 1:5863941‑M1/3‑35 (MQ=255) tCCGCCAGAAATCAGGGCAAAGATAATCCGCATTc > 1:9482652‑M1/2‑35 (MQ=255) cCCGCCAGAAATCAGGGCAAAGATAATCCGCATTc > 1:894536‑M1/2‑35 (MQ=255) aCCGCCAGAAATCAGGGCAAAGATAATCCGCATTc > 1:17175200/1‑35 (MQ=255) aCCGCCAGAAATCAGGGCAAAGATAATCCGCATTc > 1:14569001/1‑35 (MQ=255) aCCGCCAGAAATCAGGGCAAAGATAATCCGCATTc > 1:1421930/1‑35 (MQ=255) CCGCCAGAAATCAGGGCACAGATAATCCGCATTcc > 1:4094057‑M1/1‑35 (MQ=255) CCGCCAGAAATCAGGGCAAAGATAATCCGCATTcc > 1:19418547‑M1/1‑35 (MQ=255) CCGCCAGAAATCAGGGCAAAGATAATCCGCATTcc < 1:1795032‑M1/35‑1 (MQ=255) | GGAAAGGGTCAGACAGCTTGCACCCTGAATAAAACCGCCAGAAATCAGGGCAAAGATAATCCGCATTCC > REL606/293703‑293771 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |