Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 1,498,115 | 0 | T→G | 100.0% | 0.6 | 7 | V11G (GTG→GGG) | ECB_01413 | conserved hypothetical protein |
Rejected: E-value exceeds prediction threshold. | ||||||||||
Reads supporting (aligned to +/- strand): new base (6/0): ref base (1/0): total (7/0) |
ATGTCAACCGGATTACGTTTCACACTGGAAGTGGACGGCCTGCCGCCG > REL606/1498084‑1498131 | aTGTCAACCGGATTACGTTTCACACTGGAAGGggg > 1:13799259/1‑34 (MQ=0) aTGTCAACCGGATTACGTTTCACACTGGAAGGggg > 1:16023574/1‑34 (MQ=0) aTGTCAACCGGATTACGTTTCACACTGGAAGGggg > 1:16387228/1‑34 (MQ=0) tGTCAACCGGATTACGTTTCACACTGGAAGGgggc > 1:2327854/1‑33 (MQ=1) gTCAACCGGATTACTTTTCACACTGGAAGGgggtg > 1:8151539/1‑32 (MQ=1) gTCAACCGGATTACGTTTCACACTGGAAGGGGGCg > 1:14317819/1‑35 (MQ=1) cAACCGGATTACGTTTCACACTGGAAGTGGAGggg > 1:13343369/1‑34 (MQ=0) ggATTACGTTTCACACTGGAAGGGGGCGGGCCgcc > 1:12967647/1‑35 (MQ=0) ggATTACGTTTCACACTGGAAGGGGACGGGCCgcc > 1:11897301/1‑35 (MQ=1) tACGTTTCACACTGGAAGGGGACGGGCCgcccccc > 1:18325805/1‑34 (MQ=0) | ATGTCAACCGGATTACGTTTCACACTGGAAGTGGACGGCCTGCCGCCG > REL606/1498084‑1498131 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |