Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 2,122,426 | IS150 (–) +3 bp | 46.2% | coding (198‑200/216 nt) | ECB_02013 ← | conserved hypothetical protein; putative exported protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2122426 = | 47 (0.520) | 48 (0.470) | 32/48 | NT | 47.2% | coding (200/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein |
? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 2122428 | 46 (0.540) | 32 (0.320) | 21/46 | NT | 37.7% | coding (198/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein |
? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 193 total aligned reads displayed.
GTACCGTTGAAAGCCCCTACTGGTGACACCCTAAATATCCCTTACACGGGCTTATTTTTTTATGCATAA > REL606/2122394‑2122462 | gtcccGTTGAAAGCCCCTACTGGTGACACCCTaaa < 1:9832030/32‑1 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaaaa < 1:8538996‑M1/3‑1 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaaaa < 1:16426135‑M1/3‑1 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaaaa < 1:8175373‑M1/3‑1 (MQ=255) atACAGTTGAAAGCCCCTACTGGTGACGCCCTaaa < 1:4401612/34‑1 (MQ=37) tttcatcgtccaacaaaatgggtgcagtacaAAat > 1:184065‑M1/32‑35 (MQ=255) tcccgtTGAAAGCCCCTACTGGTGACACCCTAAAt < 1:19995641‑M1/33‑2 (MQ=255) tACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt < 1:17312213‑M1/35‑2 (MQ=255) tACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt > 1:18472899‑M1/1‑34 (MQ=255) tACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt > 1:13277831‑M1/1‑34 (MQ=255) tACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt < 1:8103723‑M1/35‑2 (MQ=255) tACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt > 1:7500808‑M1/1‑34 (MQ=255) aCCGTTGAAAGCCCCTACTGGTGACACCCTAAata > 1:5328589/1‑35 (MQ=255) aCCGTTGAAAGCCCCTACTGGTGACACCCTAAata > 1:5446587/1‑35 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaAAatat > 1:5725202‑M1/30‑35 (MQ=255) cctttGAAAGCCCCTACTGGTGACACCCTAAatat < 1:15711197/32‑1 (MQ=255) cGTTGAAAGCCCCTACTGGTGACACCCTAAATATc < 1:1877298/35‑1 (MQ=255) gTTGAAAGCCCCTACTGGTGACACCCTAAAtgtac > 1:15149091‑M1/1‑30 (MQ=255) gTTGAAAGCCCCTACTGGTGACACCCTAAATATcc < 1:15831539/35‑1 (MQ=255) gTTGAAAGCCCCTACTGGTGACACCATAAAtgtac < 1:18277533‑M1/35‑6 (MQ=255) ttGAAAGCCCCTACTGGTGACACCCTAAAtgtact > 1:20558175‑M1/1‑29 (MQ=255) tcgtccaacaaaatgggtgcagtacaAAATATccc < 1:2047616‑M1/9‑1 (MQ=255) tcgtccaacaaaatgggtgcagtacaAAATATccc > 1:3099599‑M1/27‑35 (MQ=255) cgtccaacaaaatgggtgcagtacaAAATATCCCt > 1:4595473‑M1/26‑35 (MQ=255) cgtccaaaaaaatgggtgcagtacaAAATATCCCt > 1:18353084‑M1/26‑35 (MQ=255) gtccaacaaaatgggtgcagtacaAAATATCCCtt > 1:3620244‑M1/25‑35 (MQ=255) gAAAGCCCCTACTGGTGACACCCTAAATATCCCtt < 1:16482819/35‑1 (MQ=255) gAAAGCCCCTACTGGTGACACCCTAAATATCCCtt > 1:10748749/1‑35 (MQ=255) aaGCCCCTACTGGTGACACCCTAAATATCCCTTac < 1:2324629/35‑1 (MQ=255) aaGCCCCGACTGGTGACTCCCTAAATATCCCTTac < 1:11259095/35‑1 (MQ=255) caacaaaatgggtgcagtacaAAATATCCCTTaca > 1:5645837‑M1/22‑35 (MQ=255) aGCCCCTACTGGTGACACCCTAAATATCCCTTaca > 1:10063833/1‑35 (MQ=255) aGCCCCTACTGGTGACACCCTAAATATCCCTTaca > 1:13258128/1‑35 (MQ=255) aGCCCCTACTGGTGACACCCTAAATATCCCTTaca < 1:15016791/35‑1 (MQ=255) gCCCCTACTGGTGACACCCTAAATATCCCTTacac < 1:2516732/35‑1 (MQ=255) gCCCCTACTGGTGACACCCTAAATATCCCTTacac < 1:14401906/35‑1 (MQ=255) aacaaaatgggtgcagtacaAAATATCCCTTacac > 1:13903239‑M1/21‑35 (MQ=255) ccccTACTGGTGACACCCTAAATATCCCTTACACg < 1:11394386/35‑1 (MQ=255) acaaaatgggtgcagtacaAAATATCCCTTACACg < 1:5231344‑M1/16‑1 (MQ=255) acaaaatgggtgcagtacaAAATATCCCTTACACg > 1:5387713‑M1/20‑35 (MQ=255) acaaaatgggtgcagtacaAAATACCCCTTACACg > 1:9599123‑M1/20‑35 (MQ=255) ccTACTGGTGACACCCTAAAtgtactgaccccaaa < 1:4694058‑M1/35‑16 (MQ=255) ccTACTGGTGACACCCTAAATATCCCTTACACggg > 1:15803092/1‑35 (MQ=255) actACTGGTGACACCCTAAAtgtactgaccccaaa < 1:17889360‑M1/34‑16 (MQ=255) aaaatgggtgcagtacaAAATATCCCTTACACggg > 1:6991668‑M1/18‑35 (MQ=255) cTACTGGTGACACCCTAAATATCCCTTACACGGGc < 1:19645282/35‑1 (MQ=255) cTACTGGTGACACCCTAAATATCCCTTACACCGGc > 1:88257/1‑35 (MQ=255) aaatgggtgcagtacaAAATATCCCTTACACGGGc > 1:15638050‑M1/17‑35 (MQ=255) tACTGGTGACACCCTAAATATCCCTTACACGGGCt < 1:771243/35‑1 (MQ=255) aatgggtgcagtacaAAATATCCCTTACACGGGCt < 1:12166102‑M1/20‑1 (MQ=255) aatgggtgcagtacaAAATATCCCTTACACGGGCt > 1:5495212‑M1/16‑35 (MQ=255) atgggtgcagtacaAAATATCCCTTACACGGGCtt < 1:3301895‑M1/21‑1 (MQ=255) aCTGGTGACGCCCTAAATATCCCTTACACGGGCtt < 1:2431146/35‑1 (MQ=255) aCTGGTGACACCCTAAAtgtactgaccccaaaaag > 1:6713694‑M1/1‑17 (MQ=255) tgggtgcagtacaAAATATCCCTTACACGGGCTTa > 1:8599023‑M1/14‑35 (MQ=255) tgggtgcagtacaAAATATCCCTTACACGGGCTTa > 1:3757594‑M1/14‑35 (MQ=255) tgggtgcagtacaAAATATCCCTTACACGGGCTTa > 1:13003551‑M1/14‑35 (MQ=255) tgggtgcagtacaAAATATCCCTTACACGGGCTTa > 1:20238126‑M1/14‑35 (MQ=255) cTGGTGACACCCTAAATATCCCTTACACGGGCTTa > 1:9817432/1‑35 (MQ=255) tGGTGACACCCTAAAtgtactgaccccaaaaagtt > 1:17765434‑M1/1‑15 (MQ=255) tGGTGACACCCTAAATATCCCTTACACGGGCTTAt > 1:8397892/1‑35 (MQ=255) gggtgcagtacaAAATATCCCTTACACGGGCTTAt < 1:9238744‑M1/23‑1 (MQ=255) gggtgcagtacaAAATATCCCTTACACGGGCTTAt < 1:7800319‑M1/23‑1 (MQ=255) ggtgcagtacaAAATATCCCTTACACGGGCTTAtt < 1:14204875‑M1/24‑1 (MQ=255) ggTGACACCCTAAAtgtactgaccccaaaaagttg < 1:12556894‑M1/35‑22 (MQ=255) ggTGACACCCTAAATATCCCTTACACGGGCTTAtt > 1:1712562/1‑35 (MQ=255) gtgcagtacaAAATATCCCTTACACGGGCTTAttt < 1:15274977‑M1/25‑1 (MQ=255) gTGACACCCTAAAtgtactgaccccaaaaagttgg < 1:389708‑M1/35‑23 (MQ=255) gTGACACCCTAAATATCCCTTACACGGTCTTAttt > 1:15582730/1‑35 (MQ=255) gTGACACCCTAAATATCCCTTACACGGGCTTAttt < 1:18575590/35‑1 (MQ=255) gTGACACCCTAAATATCCCTTACACGGGCTTAttt < 1:11007340/35‑1 (MQ=255) tgcagtacaAAATATCCCTTACACGGGCTTAtttt > 1:12128975‑M1/10‑35 (MQ=255) tgcagtacaAAATATCCCTTACACGGGCTTAtttt < 1:15873634‑M1/26‑1 (MQ=255) tGACACCCTAAAtgtactgaccccaaaaagttgga > 1:13594725‑M1/1‑12 (MQ=255) tGACACCCTAAAtgtactgaccccaaaaagttgga > 1:8710390‑M1/1‑12 (MQ=255) gcagtacaAAATATCCCTTACACGGGCTTAttttt > 1:10121850‑M1/9‑35 (MQ=255) gcagtacaAAATATCCCTTACACGGGCTTAttttt < 1:13431634‑M1/27‑1 (MQ=255) gcagtacaAAATATCCCTTACACGGGCTTAttttt < 1:19115386‑M1/27‑1 (MQ=255) gACACCCTAAAtgtactgaccccaaaaagttggac > 1:10864864‑M1/1‑11 (MQ=255) gACACCCTAAATATCCCTTACACGGGCTTAttttt < 1:19575699/35‑1 (MQ=255) cagtacaAAATATCCCTTACACGGGCTTAtttttt < 1:256627‑M1/28‑1 (MQ=255) acacCCTAAATATCCCTTACACGGGCTTAtttttt > 1:20598909/1‑35 (MQ=255) cacCCTAAAtgtactgaccccaaaaagttggacag < 1:16988363‑M1/35‑27 (MQ=255) cacCCTAAATATCCCTTACACGGGCTTAttttttt > 1:9455197/1‑35 (MQ=255) gtacaAAATATCCCTTACACGGGCTTATTTTTTTa < 1:19782025‑M1/30‑1 (MQ=255) tacaAAATATCCCTTACACGGGCTTATTTTTTTAt < 1:7331156‑M1/31‑1 (MQ=255) cccTAAAtgtacttaccccaaaaagttggacagtt > 1:6307404‑M1/1‑7 (MQ=255) ccTAAAtgtactgaccccaaaaagttggacagtta > 1:15802065‑M1/1‑6 (MQ=255) ccTAAATATCCCTTACACGGGCTTATTTTTTTATg < 1:294090/35‑1 (MQ=255) acaAAATATCCCTTACACGGGCTTATTTTTTTATg < 1:2530114‑M1/32‑1 (MQ=255) caAAATATCCCTTACACGGGCTTATTTTTTTATGc < 1:19370217‑M1/33‑1 (MQ=255) cTAAAtgtactgaccccaaaaagttggacagttaa < 1:3135134‑M1/35‑31 (MQ=255) tAAATATCCCTTACACGGGCTTATTTTTTTATGCa < 1:16647539/35‑1 (MQ=255) aaatgtactgaccccaaaaagttggacagttaaac > 1:9052099‑M1/1‑3 (MQ=255) aaatgtactgaccccaaaaagttggacagttaaac < 1:1194522‑M1/35‑33 (MQ=255) aaaTATCCCTTACACGGGCTTATTTTTTTATGCAt > 1:11774335/1‑35 (MQ=255) aaaTATCCCTTACACGGGCTTATTTTTTTATGCAt < 1:5908023/35‑1 (MQ=255) aatgtactgaccccaaaaagttggacagttaaaca > 1:15384473‑M1/1‑2 (MQ=255) aaTATCCCTTACACGGGCTTATTTTTTTATGCATa > 1:12676686/1‑35 (MQ=255) atatCACTTACACGGGCTTATTTTTTTATGCATaa < 1:7101560/35‑1 (MQ=255) | GTACCGTTGAAAGCCCCTACTGGTGACACCCTAAATATCCCTTACACGGGCTTATTTTTTTATGCATAA > REL606/2122394‑2122462 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |