New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 640120 = | 107 (1.040) | 10 (0.100) | 3/46 | NT | 11.1% | intergenic (+38/+17) | cspE/ccrB | cold shock protein E/camphor resistance protein CrcB |
? | REL606 | 2388696 = | 58 (0.590) | coding (457/810 nt) | yfcA | conserved inner membrane protein |
AGACCAAAAAAAAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/640136‑640120 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGACGCAGCCACCGGCTATTAACGCGAAGGGTAA > REL606/2388696‑2388729 aaACCAAAAAAAAACCCCGACGCAGCCACCGGCTA < 1:4555264/33‑1 ccAAAAAAAACCCCGACGCAGCCACCGGCTATTAA < 1:17103188/33‑1 CAAAAAAAAACCCCGACGCAGCCACCGGCTATTAA < 1:5023736/35‑1 cAAAAAAAACCCCGACGCAGCCACCGGCTATTAAC < 1:11913648/34‑1 cAAAAAAACCCCGACGCAGCCACCGGCTATTAACG < 1:17174312/34‑1 AAAAAAAACCCCGACGCAGCCACCGGCTATTAACG < 1:7304020/35‑1 AAAAAAAACCCCGACGCAGCCACCGGCTATTAACG < 1:1520549/35‑1 AAAAAAAACCCCGACGCAGCCACCGGCTATTAACG < 1:10326732/35‑1 cAAAAAACCCCGACGCAGCCACCGGCTATTAACGC < 1:5457112/34‑1 AAAACCCCGACGCAGCCACCGGCTATTAACGCGAA < 1:17624291/35‑1 cCCCCGACGCAGCCACCGGCTATTAACGCGAAGGG < 1:12867182/34‑1 ACCCCGACGCAGCCACCGGCTATTAACGCGAAGGG < 1:17102213/35‑1 CCCCGACGCAGCCACCGGCTATTAACGCGAAGGGT < 1:18905268/35‑1 CCCCGACGCAGCCACCGGCTATTAACGCGAAGGGT < 1:10151763/35‑1 CCCGCCGCAGCCACCGGCTATTAACGCGAAGGGTA < 1:260464/35‑1 CCGACGCAGCCACCGGCTATTAACGCGAAGGGTAA < 1:14191187/35‑1 CCGACGCAGCCACCGGCTATTAACGCGAAGGGTAA < 1:18332797/35‑1 CCGACGCAGCCACCGGCTATTAACGCGAAGGGTAA < 1:12259354/35‑1 AGACCAAAAAAAAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/640136‑640120 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGACGCAGCCACCGGCTATTAACGCGAAGGGTAA > REL606/2388696‑2388729 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |