New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2768160 | 116 (1.130) | 20 (0.210) | 7/44 | NT | 16.8% | coding (39/324 nt) | ygbE | conserved inner membrane protein |
? | REL606 | 4085858 = | 92 (0.980) | intergenic (+56/‑93) | cpxP/fieF | periplasmic protein combats stress/ferrous iron efflux protein F |
AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2768125‑2768160 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGGGGTTTTTTTTATC > REL606/4085858‑4085872 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT > 1:561656/1‑35 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT > 1:591266/1‑35 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT > 1:17596281/1‑35 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT < 1:4227331/35‑1 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT > 1:7455304/1‑35 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT > 1:14166280/1‑35 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT < 1:12349022/35‑1 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT < 1:12348078/35‑1 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT < 1:11889562/35‑1 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT > 1:11887325/1‑35 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT > 1:19537431/1‑35 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT < 1:188537/35‑1 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT < 1:10360936/35‑1 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCT > 1:9940882/1‑35 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG < 1:9495788/35‑1 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG < 1:12616696/35‑1 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG < 1:9239086/35‑1 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG > 1:385614/1‑35 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG > 1:3627922/1‑35 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG > 1:7732381/1‑35 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG > 1:10340681/1‑35 GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG > 1:18725541/1‑35 TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG > 1:4962658/1‑35 TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG > 1:17308888/1‑35 TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG > 1:1719083/1‑35 TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG > 1:16085740/1‑35 TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG > 1:6790379/1‑35 TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG > 1:13809819/1‑35 TGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGG > 1:10252098/1‑35 GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGt > 1:18631209/1‑34 GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG > 1:3618251/1‑35 GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG > 1:18614003/1‑35 GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG > 1:4685313/1‑35 GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG > 1:680566/1‑35 GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG > 1:8750485/1‑35 GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG > 1:1187472/1‑35 GACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGG > 1:10470734/1‑35 ACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGGG > 1:9621143/1‑35 ACCATGTGGTTTCTTCATCCTCAGTAAGGCTGGGG > 1:10110961/1‑35 CCATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGG > 1:2238830/1‑35 CCATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGG > 1:10698812/1‑35 CCATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGG > 1:15013449/1‑35 CATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGT > 1:12770353/1‑35 CATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGT > 1:8384492/1‑35 CATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGT > 1:17208812/1‑35 CATGTCGTTTCTTCATCCTCAGTAAGGCTGGGGGT > 1:9937418/1‑35 ATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGttg > 1:7815673/1‑32 ATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGTa > 1:4366898/1‑34 ATGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGTT > 1:19756615/1‑35 TGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGTgt > 1:3800232/1‑33 TGTGGTTTCTTCATCCTCAGTAAGGCTGGGGGTTT > 1:15621443/1‑35 GTGGTTTCTTCATCCTCAGTAAGGCTGGGGGTTTT > 1:3931316/1‑35 TGGTTTCTTCATCCTCAGTAAGGCTGGGGTTTTTT > 1:15433196/1‑35 TGGTTTCTTCATCCTCAGTAAGGCTGGGGGTTTTT > 1:11784946/1‑35 TGGTTTCTTCATCCTCAGTAAGGCTGGGGGTTTTT > 1:19651193/1‑35 TGGTTTCTTCATCCTCAGTAAGGCTGGGGGTTTTT > 1:19951901/1‑35 GGTTTCTTCATCCTCAGTAAGGCTGGGGTTTTTTT > 1:17889156/1‑35 GGTTTCTTCATCCTCAGTAAGGCTGGGGTTTTTTT > 1:9421558/1‑35 GGTTTCTTCATCCTCAGTAAGGCTGGGGGTTTTTT > 1:16438728/1‑35 GGTTTCTTCATCCTCAGTAAGGCTGGGGGTCTTTT > 1:19291062/1‑35 GTTTCTTCATCCTCAGTAAGGCTGGGGTTTTTTTT > 1:19281010/1‑35 GTTTCTTCATCCTCAGTAAGGCTGGGGGTTTTTTT > 1:15192530/1‑35 GTTTCTTCATCCTCAGTAAGGCTGGGGGTTTTTTT > 1:7969943/1‑35 GTTTCTTCATCCTCAGTAAGGCTGGGGGTCTTTTT > 1:17830888/1‑35 TTTCTTCATCCTCAGTAAGGCTGGGGGTTTTTTTT > 1:6105733/1‑35 TTCTTCATCCTCAGTAAGGCTGGGGGTTTTTTTTt > 1:6902834/1‑34 TTCTTCATCCTCAGTAAGGCTGGGGGTTTTTTTTt > 1:13402392/1‑34 TTCTTCATCCTCAGTAAGGCTGGGGGTATTTTTTt > 1:4182515/1‑34 CTTCATCCTCAGTAAGGCTGGGGGTTTTTTTTttt > 1:4603767/1‑32 AGTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2768125‑2768160 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGGGGTTTTTTTTATC > REL606/4085858‑4085872 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |