New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2064681 = | 76 (0.740) | 9 (0.120) | 3/36 | NT | 12.3% | coding (596/1218 nt) | wcaC | predicted glycosyl transferase |
? | REL606 | 4179328 = | 71 (0.920) | coding (213/591 nt) | yjaG | hypothetical protein |
CTGGCGCTGGGCTGTCAGTTTATTTCCCCCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2064715‑2064681 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccaACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCC > REL606/4179328‑4179361 CTGGCGCTGGGCTGTCAGTTTATTTCCCCCAGCCA < 1:8726165/35‑1 CTGGCGCTGGGCTGTCAGTTTATTTCCCCCAGCCA > 1:13531743/1‑35 aaaATTTCCCCCAGCCAACTGGAGAAATTTGAAGA < 1:4553460/32‑1 aaATTTCCCCCAGCCAACTGGAGAAATTTGAAGAA < 1:5889363/33‑1 aaATTTCCCCCAGCCAACTGGAGAAATTTGAAGAA < 1:16480663/33‑1 aATTTCCCCCAGCCAACTGGAGAAATTTGAAGAAG < 1:9998060/34‑1 ATTTCCCCCAGCCAACTGGAGAAATTTGAAGAAGC < 1:4802304/35‑1 ATTTCCCCCAGCCAACTGGAGAAATTTGAAGAAGC < 1:19456797/35‑1 ttgCCCCCAGCCAACTGGAGAAATTTGAAGAAGCG < 1:15765436/32‑1 aTTCCGCCAGCCAACTGGAGAAATTTGAAGAAGCG < 1:20568271/34‑1 TTTCCCCCAGCCAACTGGAGAAATTTGAAGAAGCG < 1:6145948/35‑1 TTCCCCCAGCCAACTGGAGAAATTTGAAGAAGCGA < 1:4988885/35‑1 cCCCCCAGCCAACTGGAGAAATTTGAAGAAGCGAT < 1:5995870/34‑1 TCCCCCAGCCAACTGGAGAAATTTGAAGAAGCGAT < 1:5096676/35‑1 TCCCCCAGCCAACTGGAGAAATTTGAAGAAGCGAT < 1:1012273/35‑1 TCCCCCAGCCAACTGGAGAAATTTGAAGAAGCGAT < 1:11160266/35‑1 CCCCCAGCCAACTGGAGAAATTTGAAGAAGCGATT < 1:8125240/35‑1 CCCCCAGCCAACTGGAGAAATTTGAAGAAGCGATT < 1:4665525/35‑1 CCCCCAGCCAACTGGAGAAATTTGAAGAAGCGATT < 1:19633935/35‑1 CCCCCAGCCAACTGGAGAAATTTGAAGAAGCGATT < 1:17100819/35‑1 CCCCAGCCAACTGGAGAAATTTGAAGAAGCGATTC < 1:11858820/35‑1 CCCCAGCCAACTGGAGAAATTTGAAGAAGCGATTC < 1:20261244/35‑1 CCCCAGCCAACTGGAGAAATTTGAAGAAGCGATTC < 1:15332278/35‑1 gCCAGCCAACTGGAGAAATTTGAAGAAGCGATTCC < 1:15808008/34‑1 CCCAGCCAACTGGAGAAATTTGAAGAAGCGATTCC < 1:348107/35‑1 CCCAGCCAACTGGAGAAATTTGAAGAAGCGATTCC < 1:6417468/35‑1 CCAGCCAACTGGAGAAATTTGAAGAAGCGATTCCT < 1:2790721/35‑1 CAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTT < 1:13954966/35‑1 CAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTT > 1:19705683/1‑35 CAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTT < 1:19662071/35‑1 CAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTT > 1:16208999/1‑35 CAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTT < 1:3621379/35‑1 CAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTT > 1:1146000/1‑35 CAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTT < 1:18610441/35‑1 CAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTT > 1:12866114/1‑35 CAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTT < 1:18549264/35‑1 AGCCAACTGGAGAAATTTGAAGAAGCGATTCCTTC > 1:20496995/1‑35 AGCCAACTGGAGAAATTTGAAGAAGCGATTCCTTC < 1:20263342/35‑1 AGCCAACTGGAGAAATTTGAAGAAGCGATTCCTTC > 1:13825741/1‑35 AGCCAACTGGAGAAATTTGAAGAAGCGATTCCTTC > 1:13373814/1‑35 AGCCAACTGGAGAAATTTGAAGAAGCGATTCCTTC < 1:1314631/35‑1 AGCCAACTGGAGAAATTTGAAGAAGCGATTCCTTC > 1:8729399/1‑35 AGCCAACTGGAGAAATTTGAAGAAGCGATTCCTTC > 1:8866890/1‑35 GCCGACTGGAGAAATTTGAAGAAGCGATTCCTTCA < 1:14114589/35‑1 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA > 1:11788339/1‑35 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA < 1:6972763/35‑1 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA > 1:8525387/1‑35 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA < 1:10290308/35‑1 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA < 1:2694775/35‑1 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA > 1:11946604/1‑35 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA < 1:12912670/35‑1 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA < 1:15160944/35‑1 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA > 1:14270/1‑35 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA < 1:12810008/35‑1 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA < 1:15938525/35‑1 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA > 1:18483334/1‑35 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA < 1:12253835/35‑1 GCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCA < 1:17582593/35‑1 CCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAG < 1:8817181/35‑1 CCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAG > 1:7817306/1‑35 CCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAG > 1:7570409/1‑35 CCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAG < 1:16083963/35‑1 CCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAG < 1:1424855/35‑1 CCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAG > 1:20375443/1‑35 CCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAG > 1:17170987/1‑35 CCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAG < 1:2849556/35‑1 CAACTGGAGAAATTTGAAGAAGCGATTCCTTCAGC > 1:20046571/1‑35 CAACTGGAGAAATTTGAAGAAGCGATTCCTTCAGC > 1:20036637/1‑35 CAACTGGAGAAATTTGAAGAAGCGATTCCTTCAGC < 1:12098640/35‑1 CAACTGGAGAAATTTGAAGAAGCGATTCCTTCAGC < 1:4274464/35‑1 CAACTGGAGAAATTTGAAGAAGCGATTCCTTCAGC > 1:18460042/1‑35 CAACTGGAGAAATTTGAAGAAGCGATTCCTTCAGC > 1:1055468/1‑35 CAACTGGAGAAATTTGAAGAAGCGATTCCTTCAGC < 1:5301391/35‑1 AACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCC > 1:18919102/1‑35 AACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCC < 1:7791486/35‑1 AACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCC > 1:16079632/1‑35 AACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCC < 1:1606022/35‑1 AACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCC < 1:8685738/35‑1 AACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCC < 1:280647/35‑1 AACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCC > 1:10955647/1‑35 AACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCC > 1:11301926/1‑35 CTGGCGCTGGGCTGTCAGTTTATTTCCCCCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2064715‑2064681 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccaACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCC > REL606/4179328‑4179361 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |