New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 212468 = | 63 (0.610) | 18 (0.200) | 5/42 | NT | 18.6% | intergenic (+46/‑53) | accA/ldcC | acetyl‑CoA carboxylase subunit alpha/lysine decarboxylase 2, constitutive |
? | REL606 | 235476 = | 117 (1.140) | intergenic (+3/+45) | yafE/mltD | predicted S‑adenosyl‑L‑methionine‑dependent methyltransferase/predicted membrane‑bound lytic murein transglycosylase D |
Only 100 of 132 total aligned reads displayed.
TCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGG > REL606/212434‑212502 | tCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTAt < 1:9826779/35‑1 (MQ=255) tCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTAt < 1:16671571/35‑1 (MQ=255) tCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTAt > 1:9299712/1‑35 (MQ=255) ttGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATc < 1:3737590/34‑1 (MQ=255) cTGAAAAATGGTCACTTCGGTGGCCCTTTTTTATc > 1:11222474/1‑35 (MQ=255) cTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATc < 1:749305/35‑1 (MQ=255) cTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATc < 1:12519956/35‑1 (MQ=255) cTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATc > 1:4764114/1‑35 (MQ=255) tGAAAAAGGGTCACTTCTGTGGCCCTTTTTTATCg > 1:9008700/1‑35 (MQ=255) tGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCg < 1:18928159/35‑1 (MQ=255) tGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCg < 1:3869478/35‑1 (MQ=255) gAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGc < 1:20098487/35‑1 (MQ=255) gAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGc > 1:3571417/1‑35 (MQ=255) gAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGc > 1:15434847/1‑35 (MQ=255) aaaaaGGGTCACTTCGGTGGCCCTTTTTTATCGcc > 1:706495/1‑35 (MQ=255) aaaaaGGGTCACTTCGGTGGCCCTTTTTTATCGcc > 1:19622616/1‑35 (MQ=255) aaaaaGGGTCACTTCGGTGGCCCTTTTTTATCGcc > 1:19991247/1‑35 (MQ=255) aaaaaGGGTCACTTCGGTGGCCCTTTTTTATCGcc > 1:2600808/1‑35 (MQ=255) aaaaaGGGTCACTTCGGTGGCCCTTTTTTATCGcc > 1:13255779/1‑35 (MQ=255) aaaaaGGGTCACTTCGGTGGCCCTTTTTTATCGcc > 1:11562994/1‑35 (MQ=255) aaaaGGGTCACTTCGGTTGCCCTTTTTTATCGCCa > 1:12792601/1‑35 (MQ=255) aaaaGGGTCACTTCGGTGGCCCTTTTTTATCGCCa > 1:15358601/1‑35 (MQ=255) aaaGGGTCACTTCGGTGGCCCTTTTTTATCGCCAc > 1:6474076/1‑35 (MQ=255) aaGGGTCACTTCTGTGGCCCTTTTTTATCGCCACg > 1:14259214/1‑35 (MQ=255) aaGGGTCACTTCGGTGGCCCTTTTTTATCGCCACg > 1:5062997/1‑35 (MQ=255) aaGGGTCACTTCGGTGGCCCTTTTTTATCGCCACg > 1:18917245/1‑35 (MQ=255) aaGGGTCACTTCGGTGGCCCTTTTTTATCGCCACg > 1:17730433/1‑35 (MQ=255) aaGGGTCACTTCGGTGGCCCTTTTTTATCGCCACg > 1:5994510/1‑35 (MQ=255) aaGGGTCACTTCGGTGGCCCTTTTTTATCGCCACg > 1:8887499/1‑35 (MQ=255) aaGGGTCACTTCGGTGGCCCTTTTTTATCGCCACg > 1:13415393/1‑35 (MQ=255) aGGGTCACTTCGGTGGCCCTTTTTTATCGCCACgg > 1:15247181/1‑35 (MQ=255) gggTCACTTCGGTGGCCCTTTTTTATCGCCACGGt > 1:12674829/1‑35 (MQ=255) gggTCACTTCGGTGGCCCTTTTTTATCGCCACGGt > 1:5175817/1‑35 (MQ=255) ggTCACTTCGGTGGCCCTTTTTTATCGCCACGGtt > 1:4263513/1‑35 (MQ=255) ggTCACTTCGGTGGCCCTTTTTTATCGCCACGGtt > 1:4598196/1‑35 (MQ=255) gTCACTTCGGTGGCCCTTTTTTATCGCCACGGttt > 1:19235623/1‑35 (MQ=255) gTCACTTCGGTGGCCCTTTTTTATCGCCACGGttt > 1:6014897/1‑35 (MQ=255) gTCACTTCGGTGGCCCTTTTTTATCGCCACGGttt > 1:15570923/1‑35 (MQ=255) tCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTg > 1:18270206/1‑35 (MQ=255) cACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGa > 1:13163242/1‑35 (MQ=255) cACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGa > 1:8914728/1‑35 (MQ=255) ttCGGTGGCTTTTTTTTTTCGCCACGGTTTGAGCa < 1:7907828/35‑1 (MQ=25) ttCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCa < 1:12903932/35‑1 (MQ=255) tggggTGGCTTTTTTTTTTCGCCACGGTTTGAGCa < 1:15759413/32‑1 (MQ=19) tgcggtgcctttttttttTCGCCACGGTTTGAGCa > 1:5983103‑M1/19‑35 (MQ=255) gggtggctttttttttTCGCCACGGTTTGAGCAgg > 1:7447684‑M1/17‑35 (MQ=255) cggtgcctttttttttTCGCCACGGTTTGAGCAgg > 1:6581035‑M1/17‑35 (MQ=255) gttgcctttttttttTCGCCACGGTTTGAGCAGGc > 1:11531287‑M1/16‑35 (MQ=255) ggTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGc > 1:1801005/1‑35 (MQ=255) ggTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGc > 1:16885551/1‑35 (MQ=255) ggTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGc > 1:457796/1‑35 (MQ=255) ggTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGc < 1:14400021/35‑1 (MQ=255) gTGGCCTTTTTTTATCGCCACGGTTTGAGCAGGCt < 1:10100786/35‑1 (MQ=255) gTGGCCCTTTTTTATCGCCACGGTTTTAGCAGGCt > 1:16078730/1‑35 (MQ=255) gTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCt > 1:15900616/1‑35 (MQ=255) gTGGCCCTTTTTTATCGCCAAGGTTTGAGCAGGCt < 1:18184331/35‑1 (MQ=255) tGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTa > 1:8670763/1‑35 (MQ=255) ggcctttttttttTCGCCACGGTTTGAGCAGGCTa > 1:9862902‑M1/14‑35 (MQ=255) gtctttttttttTCGCCACGGTTTGAGCAGGCTAt > 1:1441282‑M1/13‑35 (MQ=255) ggctttttttttTCGCCACGGTTTGAGCAGGCTAt > 1:19096698‑M1/13‑35 (MQ=255) gccccTTTTTTATCGCCACGGTTTGAGCAGGCTAt < 1:10319616/33‑1 (MQ=255) tctttttttttTCGCCACGGTTTGAGCAGGCTATg > 1:4182871‑M1/12‑35 (MQ=255) gcttttttttaTCGCCACGGTTTGAGCAGGCTATg > 1:2965927‑M1/12‑35 (MQ=255) gCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATg > 1:6337685/1‑35 (MQ=255) gCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATg > 1:18155662/1‑35 (MQ=255) ctttttttttTCGCCACGGTTTGAGCAGGCTATGa > 1:20437696‑M1/11‑35 (MQ=255) ctttttttttTCGCCACGGTTTGAGCAGGCTATGa > 1:6058309‑M1/11‑35 (MQ=255) cctttttttATCGCCAAGGTTTGAGCAGGCTATGa < 1:7752794/32‑1 (MQ=37) tttttttttTCGCCACGGTTTGAGCAGGCTATGAt > 1:1624761‑M1/10‑35 (MQ=255) tttttttttTCGCCACGGTTTGAGCAGGCTATGAt > 1:6242567‑M1/10‑35 (MQ=255) ttttttttATCGCCACGGTTTGAGCAGGCTATGAt < 1:14975924/33‑1 (MQ=255) cttttttttTCGCCACGGTTTGAGCAGGCTATGAt > 1:15146903‑M1/10‑35 (MQ=255) cttttttttTCGCCACGGTTTGAGCAGGCTATGAt > 1:17214101‑M1/10‑35 (MQ=255) ccTTTTTTATCGCCACGGTTTGAGCAGGCTATGAt > 1:8754550/1‑35 (MQ=255) ccTTTTTTATCGCCACGGTTTGAGCAGGCTATGAt > 1:9358355/1‑35 (MQ=255) cTTTTTTATCGCCACGGTTTGAGCAGGCTATGaat > 1:5231404/1‑33 (MQ=255) cTTTTTTATCGCCACGGTTTGAGCAGGCTATGAtt > 1:835640/1‑35 (MQ=255) ttttttATCGCCACGGTTTGAGCAGGCTATGAttt > 1:7073571/1‑34 (MQ=255) ttttttATCGCCACGGTTTGAGCAGGCTATGATTa > 1:17319341/1‑35 (MQ=255) ttttttATCGCCACGGTTTGAGCAGGCTATGATTa > 1:16750594/1‑35 (MQ=255) ttttttTCGCCACGGTTTGAGCAGGCTATGATTaa > 1:16424864‑M1/7‑35 (MQ=255) ttttATCGCCACGGTTTGAGCAGGCTATGATTaag > 1:12417327/1‑35 (MQ=255) ttttATCGCCACGGTTTGAGCAGGCTATGATTaag > 1:11437692/1‑35 (MQ=255) ttttATCGCCACGGTTTGAGCAGGCTATGATTaag > 1:17850969/1‑35 (MQ=255) ttttATCGCCACGGTTTGAGCAGGCTATGATTaag > 1:15675090/1‑35 (MQ=255) tttATCGCCACGGTTTGAGCAGGCTATGATTaagg > 1:7676023/1‑35 (MQ=255) tttTCGCCACGGTTTGAGCAGGCTATGATTaagga > 1:90852‑M1/4‑35 (MQ=255) tttTCGCCACGGTTTGAGCAGGCTATGATTaagga > 1:606791‑M1/4‑35 (MQ=255) ttATCGCCACTGTTTGAGCAGGCTATGATTaagta > 1:10108301/1‑33 (MQ=37) ttATCGCCACGGTTTGAGCAGGCTATTATTaaaga > 1:7731521/1‑35 (MQ=37) ttATCGCCACGGTTTGAGCAGGCTATGATTaagga > 1:18855171/1‑35 (MQ=255) ttTCGCCACGGTTTGAGCAGGCTATGATTaaggaa > 1:6411049‑M1/3‑35 (MQ=255) tATCGCCACGGTTTGAGCAGGCTATGATTaaggaa > 1:19581567/1‑35 (MQ=255) aTCGCCACGGTTTGAGCAGGCTATGATTtagggag > 1:7142516/1‑35 (MQ=37) aTCGCCACGGTTTGAGCAGGCTATGATTaaggaag > 1:4330012/1‑35 (MQ=255) aTCGCCACGGTTTGAGCAGGCTATGATTaaggaag > 1:16698395/1‑35 (MQ=255) aTCGCCACGGTTTGAGCAGGCTATGATTaaggaag > 1:16465951/1‑35 (MQ=255) aTCGCCACGGTTTGAGCAGGCTATGATTaaggaag > 1:9951668/1‑35 (MQ=255) aTCGCCACGGTTTGAGCAGGCTATGAATaaggaag > 1:13782167/1‑35 (MQ=255) tCGCCACGGTTTGAGCAGGCTATGATTaaggaagg < 1:19225330/35‑1 (MQ=255) | TCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGG > REL606/212434‑212502 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |