New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 180751 = | 70 (0.680) | 8 (0.080) | 5/46 | NT | 13.4% | coding (554/801 nt) | yadT | vitamin B12‑transporter protein BtuF |
? | REL606 | 3966540 = | 36 (0.370) | intergenic (‑56/‑97) | ECB_03694/ECB_03695 | conserved hypothetical protein/Magnesium and cobalt transport protein corA |
TTAAGCTCAATATCAATTCGAGAACAAATGCTAGGGTAAAAAAATTTTAAAAAAGAAGTACACTTCA > REL606/3966506‑3966572 | ttAAGCTCAATATCAATTCGAGAACAAATGCTAgg > 1:3163084/1‑35 (MQ=255) ttAAGCTCAATATCAATTCGAGAACAAATGCTAgg > 1:13425670/1‑35 (MQ=255) ctattcaaaaccaggtactcgaagtttgtggcggg > 1:625100‑M2/35‑35 (MQ=255) cgattcaaaaccaggtactcgaagtttgtggcggg > 1:1610962‑M2/35‑35 (MQ=255) cgattcaaaaccaggtactcgaagtttgtggcggg > 1:8127048‑M2/35‑35 (MQ=255) cgattcaaaaccaggtactcgaagtttgtggcggg > 1:14235025‑M2/35‑35 (MQ=255) cgattcaaaaccaggtactcgaagtttgtggcggg > 1:12801506‑M2/35‑35 (MQ=255) cgattcaaaaccaggtactcgaagtttgtggcggg > 1:12748157‑M2/35‑35 (MQ=255) cgattcaaaaccaggtactcgaagtttgtggcggg > 1:10042545‑M2/35‑35 (MQ=255) tAAGCTCAATATCAATTCGAGAACAAATGCTAggg < 1:3350878/35‑1 (MQ=255) tAAGCTCAATATCAATTCGAGAACAAATGCTAggg > 1:9213594/1‑35 (MQ=255) gattcaaaaccaggtactcgaagtttgtggcgggg > 1:7753169‑M2/34‑35 (MQ=255) gattcaaaaccaggtactcgaagtttgtggcgggg > 1:935268‑M2/34‑35 (MQ=255) gattcaaaaccaggtactcgaagtttgtggcgggg > 1:15895298‑M2/34‑35 (MQ=255) attcaaaaccatgtactcgaagtttgtggcggggg > 1:14300648‑M2/33‑34 (MQ=255) aaGCTCAATATCAATTCTAGAACAAATGCTAGGGt > 1:15809761/1‑35 (MQ=255) aaGCTCAATATCAATTCGAGAACAAATGCTAGGGt > 1:13731697/1‑35 (MQ=255) aaGCTCAATATCAATTCGAGAACAAATGCTAGGGt > 1:20366137/1‑35 (MQ=255) aaGCTCAATATCAATTCGAGAACAAATGCTAGGGt > 1:3226146/1‑35 (MQ=255) aaGCTCAATATCAATTCGAGAACAAATGCTAGGGt < 1:12479653/35‑1 (MQ=255) aaGCTCAATATCAATTCGAGAACAAATGCTAGGGt < 1:12106194/35‑1 (MQ=255) ttcaaaaccaggtactcgaagtttgtggcggggga > 1:4015929‑M2/32‑33 (MQ=255) aGCTCAATATCAATTCGAGAACAAATGCTAGGGTa > 1:19266818/1‑35 (MQ=255) aGCTCAATATCAATTCGAGAACAAATGCTAGGGTa < 1:12827075/35‑1 (MQ=255) aGCTCAATATCAATTCGAGAACAAATGCTAGGGTa > 1:16978888/1‑35 (MQ=255) tcaaaaccaggtactcgaagtttgtggcggGGAaa > 1:15257790‑M2/31‑35 (MQ=255) tcaaaaccaggtactcgaagtttgtggcggGGAaa > 1:5556191‑M2/31‑35 (MQ=255) tcaaaaccaggtactcgaagtttgtggcggGGAaa > 1:12288653‑M2/31‑35 (MQ=255) gCTCAATATCAATTCGAGAACAAATGCTAGGGTaa > 1:5910054/1‑35 (MQ=255) gCTCAATATCAATTCGAGAACAAATGCTAGGGTaa < 1:4809826/35‑1 (MQ=255) gCTCAATATCAATTCGAGAACAAATGCTAGGGTaa > 1:7152372/1‑35 (MQ=255) gCTCAATATCAATTCGAGAACAAATGCTAGGGTaa < 1:7615231/35‑1 (MQ=255) gCTCAATATCAATTCGAGAACAAATGCTAGGGTaa > 1:18196090/1‑35 (MQ=255) caaaaccaggtactcgaagtttgtggcggGGGaaa > 1:15545006‑M2/30‑35 (MQ=255) caaaaccaggtactcgaagtttgtggcggGGGaaa > 1:13617395‑M2/30‑35 (MQ=255) aaaaccaggtactcgaagtttgtggcggGGGaaaa > 1:13554901‑M2/29‑35 (MQ=255) cAATATCAATTCGAGAACAAATGCTAGGGTaaaaa > 1:3095775/1‑35 (MQ=255) cAATATCAATTCGAGAACAAATGCTAGGGTaaaaa < 1:1010554/35‑1 (MQ=255) cAATATCAATTCGAGAACAAATGCTAGGGTaaaaa > 1:7185305/1‑35 (MQ=255) cAATATCAATTCGAGAACAAATGCTAGGGTaaaaa > 1:3468897/1‑35 (MQ=255) cAATATCAATTCGAGAACAAATGCTAGGGTaaaaa < 1:14705699/35‑1 (MQ=255) aaccaggtactcgaagtttgtggcggGGGaaaaaa > 1:3230551‑M2/27‑35 (MQ=255) aaccaggtactcgaagtttgtggcggGGGaaaaaa > 1:17666541‑M2/27‑35 (MQ=255) accaggtactcgaagtttgtggcggGGgaaaaaac > 1:13777568‑M2/26‑34 (MQ=255) tatCAATTCGAGAACAAATGCTAGGGTAAAAAAAt > 1:17924276/1‑35 (MQ=255) atCAATTCGAGAACAAATGCTAGGGTAAAAAAAtt > 1:9072049/1‑35 (MQ=255) tCAATTCGAGAACAAATGCTAGGGTAAAAAAAttt < 1:5413452/35‑1 (MQ=255) aaTTCGAGAACAAATGCTAGGGTAAAAAAATTTTa < 1:14440523/35‑1 (MQ=255) aaTTCGAGAACAAATGCTAGGGTAAAAAAATTTTa > 1:5549352/1‑35 (MQ=255) tactcgaagtttgtggcggGGGAAAAAAATTTTaa > 1:8470961‑M2/20‑35 (MQ=255) ttCGAGAACAAATGCTAGGGTAAAAAAATTTTaaa < 1:4753988/35‑1 (MQ=255) actcgaagtttgtggcggGGGAAAAAAATTTTaaa > 1:9701890‑M2/19‑35 (MQ=255) tCGAGAACAAATGCTAGGGTAAAAAAATTTTaaaa > 1:20614284/1‑35 (MQ=255) cGAGAACAAATGCTAGGGTAAAAAAATTTTaaaaa > 1:20188145/1‑35 (MQ=255) cGAGAACAAATGCTAGGGTAAAAAAATTTTaaaaa < 1:8448636/35‑1 (MQ=255) gagaACAAATGCTAGGGTAAAAAAATTTTaaaaaa > 1:8083545/1‑35 (MQ=255) gagaACAAATGCTAGGGTAAAAAAATTTTaaaaaa < 1:12928513/35‑1 (MQ=255) gagaACAAATGCTAGGGTAAAAAAATTTTaaaaaa > 1:4220690/1‑35 (MQ=255) gagaACAAATGCTAGGGTAAAAAAATTTTaaaaaa > 1:4533397/1‑35 (MQ=255) agaACAAATGCTAGGGTAAAAAAATTTTAAAAaag < 1:17624756/35‑1 (MQ=255) gaACAAATGCTAGGGTAAAAAAATTTTAAAAaaga > 1:12575806/1‑35 (MQ=255) aaCAAATGCTAGGGTAAAAAAATTTTAAAAaagaa > 1:7599844/1‑35 (MQ=255) aaCAAATGCTAGGGTAAAAAAATTTTAAAAaagaa > 1:19615919/1‑35 (MQ=255) aaCAAATGCTAGGGTAAAAAAATTTTAAAAaagaa > 1:1535954/1‑35 (MQ=255) aCAAATGCTAGGGTAAAAAAATTTTAAAAaagaag > 1:20081891/1‑35 (MQ=255) aCAAATGCTAGGGTAAAAAAATTTTAAAAaagaag > 1:14402625/1‑35 (MQ=255) cAAATGCTAGTGTAAAAAAATTTTAAAAAAGAAGt > 1:9018111/1‑35 (MQ=255) cAAATGCTAGGGTAAAAAAATTTTAAAAAAGAAGt > 1:4959230/1‑35 (MQ=255) cAAATGCTAGGGTAAAAAAATTTTAAAAAAGAAGt < 1:18842457/35‑1 (MQ=255) aaaTGCTAGGGTAAAAAAATTTTAAAAAAGAAGTa > 1:9810040/1‑35 (MQ=255) aaaTGCTAGGGTAAAAAAATTTTAAAAAAGAAGTa > 1:9179414/1‑35 (MQ=255) aaaTGCTAGGGTAAAAAAATTTTAAAAAAGAAGTa < 1:16432858/35‑1 (MQ=255) aaaTGCTAGGGTAAAAAAATTTTAAAAAAGAAGTa < 1:19902394/35‑1 (MQ=255) aaTGCTAGGGTAAAAAAATTTTAAAAAAGAAGTac > 1:19211580/1‑35 (MQ=255) aTGCTAGGGTAAAAAAATTTTAAAAAAGAAGTaca < 1:6047046/35‑1 (MQ=255) aTGCTAGGGTAAAAAAATTTTAAAAAAGAAGTaca > 1:10536293/1‑35 (MQ=255) aTGCTAGGGTAAAAAAATTTTAAAAAAGAAGTaca < 1:3374373/35‑1 (MQ=255) tGCTAGGGTAAAAAAATTTTAAAAAAGAAGTacac > 1:18170414/1‑35 (MQ=255) tGCTAGGGTAAAAAAATTTTAAAAAAGAAGTacac < 1:13299423/35‑1 (MQ=255) cTAGGGTAAAAAAATTTTAAAAAAGAAGTACACtt < 1:18274462/35‑1 (MQ=255) cTAGGGTAAAAAAATTTTAAAAAAGAAGTACACtt < 1:14337570/35‑1 (MQ=255) cTAGGGTAAAAAAATTTTAAAAAAGAAGTACACtt < 1:13659349/35‑1 (MQ=255) tAGGGTAAAAAAATTTTAAAAAAGAAGTACACTTc > 1:3942389/1‑35 (MQ=255) tAGGGTAAAAAAATTTTAAAAAAGAAGTACACTTc < 1:9243879/35‑1 (MQ=255) tAGGGTAAAAAAATTTTAAAAAAGAAGTACACTTc < 1:5532189/35‑1 (MQ=255) tAGGGTAAAAAAATTTTAAAAAAGAAGTACACTTc < 1:8908985/35‑1 (MQ=255) tAGGGTAAAAAAATTTTAAAAAAGAAGTACACTTc < 1:18454403/35‑1 (MQ=255) aGGGTAAAAAAATTTTAAAAAAGAAGTACACTTca < 1:13748002/35‑1 (MQ=255) aGGGTAAAAAAATTTTAAAAAAGAAGTACACTTca < 1:14500996/35‑1 (MQ=255) | TTAAGCTCAATATCAATTCGAGAACAAATGCTAGGGTAAAAAAATTTTAAAAAAGAAGTACACTTCA > REL606/3966506‑3966572 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |