New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3069621 | 69 (0.670) | 12 (0.140) | 4/40 | NT | 17.1% | coding (838/1500 nt) | pitB | phosphate transporter |
? | REL606 | = 3625456 | 59 (0.690) | pseudogene (7/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
GGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3069584‑3069621 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagGGGGGGCGGGGA < REL606/3625456‑3625445 GGCAATGGAGGTTCCATCGCAATCAACTTCTGCGG < 1:503564/35‑1 GGCAATGGAGGTTCCATCGCAATCAACTTCTGCGG < 1:4362987/35‑1 GGCAATGGAGGTTCCATCGCAATCAACTTCTGCGG < 1:18994230/35‑1 GGCAATGGAGGGTCCATCGCAATCAACTTCTGCGG > 1:12396742/1‑35 GCAATGGAGGTTCCATCGCAATCAACTTCTGCGGC < 1:12823128/35‑1 GCAATGGAGGTTCCATCGCAATCAACTTCTGCGGC < 1:12933558/35‑1 GCAATGGAGGTTCCATCGCAATCAACTTCTGCGGC < 1:2589447/35‑1 CAATGGAGGTTCCATCGCAATCAACTTCTGCGGCA < 1:9481640/35‑1 CAATGGAGGTTCCATCGCAATCAACTTCTGCGGCA < 1:9221277/35‑1 CAATGGAGGTTCCATCGCAATCAACTTCTGCGGCA < 1:13622338/35‑1 CAATGGAGGTTCAATCGCAATCAACTTCTGCGGCA < 1:2824881/35‑1 CAATGGAGGGTCCATCGCAATCAACTTCTGCGGCA > 1:16206571/1‑35 AATGGAGGTTCCATCGCAATCAACTTCTGCGGCAG < 1:6549745/35‑1 ATGGAGGGTCCATCGCAATCAACTTCTGCGGCAGG > 1:10781162/1‑35 ATGGAGGGTCCATCGCAATCAACTTCTGCGGCAGG > 1:14411894/1‑35 ATGGAGGGTCCATCGCAATCAACTTCTGCGGCAGG > 1:14130098/1‑35 TGGAGGTTCCATCGCAATCAACTTCTGCGGCAGGG > 1:16496884/1‑35 GGAGGTTCCATCGCAATCAACTTCTGCGGCAGGGG > 1:955876/1‑35 GGAGGTTCCATCGCAATCAACTTCTGCGGCAGGGG > 1:10983670/1‑35 GGAGGTTCCATCGCAATCAACTTCTGCGGCAGGGG > 1:12878756/1‑35 GAGGTTCCATCGCAATCAACTTCTGCGGCAGGGGG > 1:16779454/1‑35 GAGGTTCCATCGCAATCAACTTCTGCGGCAGGGGG > 1:1693778/1‑35 AGGTTCCATCGCAATCAACTTCTGCGGCAGGGtag > 1:7797552/1‑32 AGGTTCCATCGCAATCAACTTCTGCGGCAGGGGGG > 1:16595993/1‑35 AGGTTCCATCGCAATCAACTTCTGCGGCAGGGGGG > 1:15604591/1‑35 AGGTTCCATCGCAATCAACTTCTGCGGCAGGGCGG > 1:3020323/1‑35 GGTTCCATCGCAATCAACTTCTGCGGCAGGGGGGG > 1:4958347/1‑35 TTCCATCGCAATCAACTTCTGCGGCAGGGGGGGgg > 1:5351892/1‑33 TTCCATCGCAATCAACTTCTGCGGCAGGGGGGGgg > 1:13405240/1‑33 TTCCATCGCAATCAACTTCTGCGGCAGGGGGGGgg > 1:3666096/1‑33 TTCCATCGCAATCAACTTCTGCGGCAGGGGGGGgg > 1:16029725/1‑33 TCCATCGCAATCAACTTCTGCGGCAGGGGGGGGGG > 1:7292365/1‑35 CCATCGCAATCAACTTCTGCGGCAGGGGGGGGGGG > 1:2631909/1‑35 CATCGCAATCAACTTCTGCGGCAGGGGGGGGGGGG > 1:6320725/1‑35 CATCGCAATCAACTTCTGCGGCAGGGGGGGGGGGG > 1:16499908/1‑35 ATCGCAATCAACTTCTGCGGCAGGGGGGGGGGGGt > 1:8525978/1‑34 ATCGCAATCAACTTCTGCGGCAGGGGGGGGGGGGg > 1:13660785/1‑34 ATCGCAATCAACTTCTGCGGCAGGGGGGGGGGGGg > 1:6697121/1‑34 GGCAATGGAGGTTCCATCGCAATCAACTTCTGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3069584‑3069621 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagGGGGGGCGGGGA < REL606/3625456‑3625445 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |