New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 223959 = | 46 (0.450) | 15 (0.180) | 4/38 | NT | 24.3% | coding (503/654 nt) | metI | DL‑methionine transporter subunit |
? | REL606 | 1306336 = | 57 (0.700) | intergenic (‑97/+274) | cls/kch | cardiolipin synthetase/voltage‑gated potassium channel |
Only 100 of 329 total aligned reads displayed.
ATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGCGGGGGTATAATGACCATTCTGTTATTGCATA > REL606/1306302‑1306370 | tggtcggttattccgcgatgggtggtgcagtcggg > 1:16298736‑M2/35‑35 (MQ=255) tcgataattttgccaaccacgattttcGCGTcggg < 1:14462357‑M1/8‑1 (MQ=255) atctcgacaaagcccgtctggtggtcagcgtcggg > 1:14936413‑M2/35‑35 (MQ=255) atctcgacaaagcccgtctggtggtcagcgtcggg > 1:2843446‑M2/35‑35 (MQ=255) acagcccctggataaacttgctctcCAGCGTcggg < 1:12965351‑M1/10‑1 (MQ=255) tAAAAACGCGGGAAAAGCACTGGTCAGCGTcgggg < 1:11648226/35‑1 (MQ=255) ggtcggttattccgcgatgggtggtgcagtcgggg > 1:2218998‑M2/34‑35 (MQ=255) ggtcggttattccgcgatgggtggtgcagtcgggg > 1:3290402‑M2/34‑35 (MQ=255) ggtcggttattccgcgatgggtggtgcagtcgggg > 1:16871473‑M2/34‑35 (MQ=255) ggtcggttattccgcgatgggtggtgcagtcgggg > 1:3396135‑M2/34‑35 (MQ=255) gaataccggtatgacgctgctttccagcgtcgggg > 1:18318876‑M2/34‑35 (MQ=255) cgataattttgccaaccacgattttcGCGTcgggg < 1:5132009‑M1/9‑1 (MQ=255) cgataattttgccaaccacgattttcGCGTcgggg < 1:12332230‑M1/9‑1 (MQ=255) cagcccctggataaacttgctctcCAGCGTcgggg < 1:5915495‑M1/11‑1 (MQ=255) cagcccctggacaaacttgctctcCAGCGTcgggg < 1:16618140‑M1/11‑1 (MQ=255) aaacgtattcagcatcaggattttgagcggcgggg > 1:9142912‑M2/34‑35 (MQ=255) tacaccaaatgcaccagcctttTCAGCGTcggggg < 1:7541054‑M1/13‑1 (MQ=255) gataattttgccaaccacgattttcGCGTcggggg < 1:11945611‑M1/10‑1 (MQ=255) gataattttgccaaccacgattttcGCGTcggggg < 1:18967234‑M1/10‑1 (MQ=255) gataattttgccaaccacgattttcGCGTcggggg < 1:9460870‑M1/10‑1 (MQ=255) ctcgacaaagcccgtctggtggtcagcgtcggggg > 1:19061176‑M2/33‑35 (MQ=255) agcccctggataaacttgctctcCAGCGTcggggg < 1:10780355‑M1/12‑1 (MQ=255) agcccctggataaacttgctctcCAGCGTcggggg < 1:5623750‑M1/12‑1 (MQ=255) aataccggtatgacgcttctttccagcgtcggggg > 1:19743269‑M2/33‑35 (MQ=255) aacgtattcagcatcaggattttgagcggcggggg > 1:18008319‑M2/33‑35 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggg > 1:9571039/1‑35 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggg > 1:14483045/1‑35 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggg < 1:8365631/35‑1 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggg > 1:3685548/1‑35 (MQ=255) tcgacaaagcccgtctggtggtcagcgtcgggggg > 1:4613301‑M2/32‑34 (MQ=255) gcccctggataaacttgctctcCAGCGtcgggggg < 1:20092454‑M1/13‑2 (MQ=255) gcccctggataaacttgctctcCAGCGtcgggggg < 1:7062122‑M1/13‑2 (MQ=255) ataccggtatgacgctgctttccagcgtcgggggg > 1:1856063‑M2/32‑34 (MQ=255) acaccaaatgcaccagcctttTCAGCGtcgggggg < 1:15680245‑M1/14‑2 (MQ=255) aacggtttaatatcgcgcataaatgcgtcgggggg > 1:14816966‑M2/32‑34 (MQ=255) taattttgccaaccacgattttcGCgtcggggggg < 1:16692973‑M1/12‑3 (MQ=255) cgtattcagcatcaggattttgagcggcggggcac > 1:4482473‑M2/31‑32 (MQ=255) cggttattccgcgatgggtggtgcagtcgggggcc > 1:1350007‑M2/31‑34 (MQ=255) cgacaaagcccgtctggtggtcagcgtcggggggg > 1:17496806‑M2/31‑33 (MQ=255) gtattcagcatcaggattttgagcggcgggggggg > 1:13033854‑M2/30‑35 (MQ=255) gacaaagcccgtctggtggtcagcgtcgggggggg > 1:2563311‑M2/30‑35 (MQ=255) cggtttaatatcgcgcataaatgcgtcgggggggg > 1:12070471‑M2/30‑35 (MQ=255) cggtttaatatcgcgcataaatgcgtcggggggcg > 1:1592207‑M2/30‑32 (MQ=255) aattttgccaaccacgattttcGcgtcgggggggg < 1:18781573‑M1/13‑4 (MQ=255) aaCGCGGGAAAAGCACTGGTCAGCGTcgggggcgg < 1:15475852/35‑1 (MQ=255) aaCGCGGGAAAAGCACTGGTCAGCGTcgggggcgg > 1:5020385/1‑35 (MQ=255) ggtttaatatcgcgcataaatgcgtcggggggggg > 1:14125139‑M2/29‑35 (MQ=255) ggtttaatatcgcgcataaatgcgtcggggggggg > 1:5156231‑M2/29‑35 (MQ=255) ggtttaatatcgcgcataaatgcgtcgggggcggg > 1:5368361‑M2/29‑35 (MQ=255) cctggataaacttgctctcCAGCGTcggggggggg < 1:623907‑M1/16‑1 (MQ=255) ttttgccaaccacgattttcGCGTcgggggggggg < 1:6363326‑M1/15‑1 (MQ=255) ttttgccaaccacgattttcGCGTcgggggggggg < 1:14713936‑M1/15‑1 (MQ=255) ttttgccaaccacgattttcGCGTcgggggggggg < 1:19819937‑M1/15‑1 (MQ=255) ttttgccaaccacgattttcGCGTcgggggggggg < 1:11338889‑M1/15‑1 (MQ=255) ttattccgcgatgggtggtgcagtcgggggcgggg > 1:1155530‑M2/28‑35 (MQ=255) cggtatgacgctgctttccagcgtcgggggggggg > 1:3996491‑M2/28‑35 (MQ=255) cgcgGGAAAAGCACTGGTCAGCGTcgggggcgggg < 1:19347200/35‑1 (MQ=255) cgcgGGAAAAGCACTGGTCAGAGTcgggggcgggg < 1:3516590/35‑1 (MQ=255) caaatgcaccagcctttTCAGCGTcgggggggggg < 1:12209947‑M1/18‑1 (MQ=255) caaatgcaccagcctttTCAGCGTcgggggggggg < 1:2719700‑M1/18‑1 (MQ=255) caaagcccgtctggtggtcagcgtcgggggggggg > 1:12668824‑M2/28‑35 (MQ=255) tttgccaaccacgattttcGCGTcggggggggggg < 1:2107096‑M1/16‑1 (MQ=255) tttaatatcgcgcataaatgcgtcggggggggggg > 1:4924808‑M2/27‑35 (MQ=255) tattccgcgatgggtggtgcagtcgggggcggggg > 1:10431294‑M2/27‑35 (MQ=255) ggtatgacgctgctttccagcgtcggggggggggg > 1:10827774‑M2/27‑35 (MQ=255) aaagcccgtctggtggtcagcgtcggggggggggg > 1:10577838‑M2/27‑35 (MQ=255) tcagcatcaggattttgagcggcgggggcggggga > 1:8871800‑M2/26‑34 (MQ=255) attccgcgatgggtggtgcagtcgggggcgggggg > 1:8983872‑M2/26‑34 (MQ=255) aagcccgtctggtggtcagcgtcgggggggggggg > 1:3084660‑M2/26‑34 (MQ=255) gggAAAAGCACTGGTCAGCGTCGGGGGCGGGGGta < 1:3197120/35‑1 (MQ=255) ggAAAAGCACTGGTCAGCGTCGGGGGCGGGGGgat > 1:8100089/1‑35 (MQ=255) gAAAAGCACTGGTCAGCGTCGGGGGCGGGGGtata < 1:2007744/35‑1 (MQ=255) gAAAAGCACTGGTCAGCGTCGGGGGCGGGGGgata > 1:8201132/1‑35 (MQ=255) aaaaGCACTGGTCAGCGTCGGGGGCGGGGGGATaa > 1:7918355/1‑35 (MQ=255) aaaGCACTGGTCAGCGTCGGGGGCGGGGGTATAAt > 1:6665616/1‑35 (MQ=255) aaaGCACTGGTCAGCGACGGGGGCGGGGGGAGAAt > 1:19182598/1‑35 (MQ=25) aaGCACTGGTCAGCGTCGGGGGCGGGGGTATAATg < 1:8559725/35‑1 (MQ=255) aGCACTGGTCAGCGTCGGGGGCGGGGGTATAATGa < 1:6617072/35‑1 (MQ=255) cACTGGTCAGCGTCGGGGGCGGGGGTATAATGAcc < 1:10975586/35‑1 (MQ=255) cACTGGTCAGCGTCGGGGGCGGGGGGATAATGAcc > 1:7234179/1‑35 (MQ=255) aCTGGTCAGCGTCGGGGGCGGGGGTATAATGACCa < 1:17393285/35‑1 (MQ=255) cTGGTCAGCGTCGGGGGCGGGGGTATAATGACCAt < 1:15799598/35‑1 (MQ=255) cTGGTCAGCGTCGGGGGCGGGGGTATAATGAACAt < 1:1026223/35‑1 (MQ=255) cTGGTCAGCGTCGGGGGCGGGGGTATAATGAACAt < 1:15074814/35‑1 (MQ=255) ggtcagcgtcggGGGCGGGGGGATAATGACCATTc > 1:4715203‑M2/13‑35 (MQ=255) gtcagcgtcggGGGCGGGGGGATAATGACCATTCt > 1:5443308‑M2/12‑35 (MQ=255) tcagcgtcggGGGCGGGGGTATAATGACCATTCTg < 1:10005403‑M2/25‑1 (MQ=255) tcagcgtcggGGGCGGGGGGATAATGACCATTCTg > 1:6913907‑M2/11‑35 (MQ=255) agcgtcggGGGCGGGGGTATAATGACCATTCTGtt < 1:780094‑M2/27‑1 (MQ=255) agcgtcggGGGCGGGGGTATAATGACCATTCTGtt < 1:20426773‑M2/27‑1 (MQ=255) cgtcggGGGCGGGGGTATAATGACCATTCTGTTAt > 1:13661356‑M2/7‑35 (MQ=255) gtcggGGGCGGGGGTATAATGACAATTCTGTTAtt < 1:2386677‑M2/30‑1 (MQ=255) tcggGGGCGTGGGTATAATGACCATTCTGTTATTg > 1:9292607‑M2/5‑35 (MQ=255) tcggGGGCGGGGGTATAATGACCATTCTGTTATTg < 1:6028338‑M2/31‑1 (MQ=255) cggGGGCGGGGGTATAATGACCATTCTGTTATTGc < 1:12757251‑M2/32‑1 (MQ=255) cggGGGCGGGGGTATAATGACCATTCTGTTATTGc < 1:1778674‑M2/32‑1 (MQ=255) ggGGGCGGGGGTATAATGACCATTCTGTTATTGCa < 1:2275497‑M2/33‑1 (MQ=255) gGGGCTGGGGTATAATGACCATTCTGTTATTGCAt > 1:17250216‑M2/2‑35 (MQ=255) gGGGCGGGGGTATAATGACCATTCTGTTATTGCAt > 1:6451332‑M2/2‑35 (MQ=255) gggcgggggTATAATGACCATTCTGTTATTGCATa > 1:8745797/1‑35 (MQ=255) | ATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGCGGGGGTATAATGACCATTCTGTTATTGCATA > REL606/1306302‑1306370 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |