New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 280732 | 59 (0.570) | 9 (0.120) | 3/36 | NT | 14.3% | coding (170/636 nt) | yagZ | hypothetical protein |
? | REL606 | 3006460 = | 64 (0.830) | coding (470/819 nt) | yafZ | conserved protein |
Only 100 of 164 total aligned reads displayed.
GAGAAAGTTATTGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGACCGGATTGAGGAAAAGCGTGATGCC > REL606/3006426‑3006494 | tctaaaGTTATTGAAGGGGCTTACGAGGTGGTggg < 1:18581998/32‑1 (MQ=255) gagaAAGTTATTGAAGGGGCTTACGAGGTGGTggg < 1:20465090/35‑1 (MQ=255) gagaAAGTTATTGAAGGGGCTTACGAGGTGGTggg < 1:5155531/35‑1 (MQ=255) gagaAAGTTATTGAAGGGGCTTACGAGGTGGGggg > 1:17131004/1‑35 (MQ=255) gagaAAGTTATTGAAGGGGCTTACGAGGTGGGggg > 1:10979141/1‑35 (MQ=255) ctaccgagtggcgtcacaaccagcttactggtggg > 1:8935544‑M2/35‑35 (MQ=255) ctaccgagtggcgtcacaaccagcttactggtggg > 1:17894568‑M2/35‑35 (MQ=255) agaAAGTTATTGAAGGGGCTTACGAGGTGGGgggg > 1:3004777/1‑35 (MQ=255) agaAAGTTATTGAAGGGGCTTACGAGGAGGGgggg > 1:14576890/1‑35 (MQ=255) accgagtggcgtcacaaccagcttactggtggggg > 1:15057575‑M2/33‑35 (MQ=255) aaaGTTATTGAAGGGGCTTACGAGGTGGGgggggg > 1:2906190/1‑34 (MQ=255) aaaGTTATTGAAGGGGCTTACGAGGTGGGGGGGGt > 1:19171659/1‑35 (MQ=255) cgagtggcgtcacaaccagcttactggtggggggt > 1:19407746‑M2/31‑33 (MQ=255) atttcctgcgcggtcagcgtcAGGTGGTGGGGGtt < 1:482906‑M1/14‑1 (MQ=255) aaGTTATTGAAGGGGCTTACGAGGTGGTggggggt > 1:11353693/1‑33 (MQ=255) aaGTTATTGAAGGGGCTTACGAGGTGGTggggggt > 1:12716284/1‑33 (MQ=255) aaGTTATTGAAGGGGCTTACGAGGTGGTGGGGGtt < 1:5845881/35‑1 (MQ=255) aaGTTATTGAAGGGGCTTACGAGGTGGTGGGGGtt < 1:8478777/35‑1 (MQ=255) tttccggcgcggtcagcgtcAGGTGGTGGGGGttt < 1:2578947‑M1/15‑1 (MQ=255) gagtggcgtcacaaccagcttactggtggGGGgtt > 1:9528882‑M2/30‑35 (MQ=255) gagtggcgtcacaaccagcttactggtggGGGctt > 1:12730413‑M2/30‑35 (MQ=255) gagtggcgtcacaaccagcttactggtggGGGctt > 1:2549850‑M2/30‑35 (MQ=255) aGTTATTGAAGGGGCTTACGAGGTGGTGGGGGttt < 1:2074754/35‑1 (MQ=255) aGTTATTGAAGGGGCTTACGAGGTGGGGGGGGgtt > 1:9453410/1‑35 (MQ=255) gTTATTGAAGGGGCTTACGAGGTGGTGGGGGtttt < 1:6563745/35‑1 (MQ=255) gTTATTGAAGGGGCTTACGAGGTGGTGGGGGtttt < 1:10132769/35‑1 (MQ=255) agtggcgtcacaaccagcttactggtggGGGgttt > 1:20023494‑M2/29‑35 (MQ=255) ttATTGAAGGGGCTTACGAGGTGGGGGGGGgtttt > 1:3933300/1‑35 (MQ=255) gtggcgtcacaaccagcttactggtggGGGttttt > 1:8247623‑M2/28‑35 (MQ=255) gtggcgtcacaaccagcttactggtggGGGctttt > 1:4717955‑M2/28‑35 (MQ=255) tATTGAAGGGGCTTACGAGGTGGTGGGGGTTTTTg < 1:10168495/35‑1 (MQ=255) aTTGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGa < 1:5208633/35‑1 (MQ=255) aTTGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGa < 1:16839129/35‑1 (MQ=255) aTTGAAGGGGCTTACGAGGTGGGGGGGGgtttttg > 1:4327508/1‑33 (MQ=255) aTTGAAGGGGCTTACGAGGTGGGGGGGGGTTTTgt > 1:5346896/1‑34 (MQ=255) ttGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGAc < 1:14601626/35‑1 (MQ=255) ttGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGAc < 1:20293911/35‑1 (MQ=255) ttGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGAc < 1:8698085/35‑1 (MQ=255) ttGAAGGGGCTTACGAGGTGGGGGGGGGTTTTGAc > 1:16455984/1‑35 (MQ=255) tGAAGTGGCTTACGAGGTGGGGGGGGGTTTTTAcc > 1:14012028/1‑35 (MQ=255) tGAAGGGGCTTACGAGGTGGGGGGGGGTTTTTAcc > 1:391589/1‑35 (MQ=255) gAAGGGGCTTACGAGGTGGTGGGGGTTTTTGACCg < 1:8656133/35‑1 (MQ=255) gAAGGGGCTTACGAGGTGGTGGGGGGTTTTGACCg > 1:11267157/1‑35 (MQ=255) aaGGGGCTTACGAGGTGGTGGGGGTTTTTGACCgg < 1:11472497/35‑1 (MQ=255) ggggCTTACGAGGTGGTGGGGGTTTTTGACCGGAt < 1:16408881/35‑1 (MQ=255) gggCTTACGAGGTGGTGGGGGTTTTTGACCGGAtt < 1:3673350/35‑1 (MQ=255) gggCTTACGAGGTGGTGGGGGTTTTTGACCGGAtt < 1:10297603/35‑1 (MQ=255) gggCTTACGAGGTGGTGGGGGTTTTTGACCGGAtt < 1:2779189/35‑1 (MQ=255) ggCTTACGAGGTGGTGGGGGTTTTTGACCGGATTg < 1:857933/35‑1 (MQ=255) gCTTACTAGGTGGTGGGGGTTTTTGACCGGATTGa > 1:2307052/1‑35 (MQ=255) gCTTACGAGGTGGTGGGGGTTTTTGACCGGATTGa < 1:1356722/35‑1 (MQ=255) gCTTACGAGGTGGTGGGGGGTTTTGACCGGATTGa > 1:8576373/1‑35 (MQ=255) cTTACGAGGTGGTGGGGGTTTTTGACCGGATTGAg < 1:9475039/35‑1 (MQ=255) cTTACGAGGTGGTGGGGGTTTTTGACCGGATTGAg > 1:1771377/1‑35 (MQ=255) cTTACGAGGTGGTGGGGGTTTTTGACCGGATTGAg < 1:12005466/35‑1 (MQ=255) ttACTAGGTGGTGGGGGTTTTTGACCGGATTGAgg < 1:18963000/35‑1 (MQ=255) tACGAGGTGGTGGGGGGTTTTGACCGGATTGAGGa > 1:19157166/1‑35 (MQ=255) aCGAGGTGGTGGGGGTTTTTGACCGGATTGAGGaa < 1:18312222/35‑1 (MQ=255) cGAGGTGGTGGGGGTTTTTGACCGGATTGAGGaaa < 1:7887050/35‑1 (MQ=255) cGAGGTGGTGGGGGTTTTTGACCGGATTGAGGaaa < 1:10471241/35‑1 (MQ=255) gAGGTGGTGGGGGTTTTTGACCGGATTGAGGaaaa < 1:3369155/35‑1 (MQ=255) gAGGTGGTGGGGGTTTTTGACCGGATCGAGGaaaa < 1:4266494/35‑1 (MQ=255) AGGTGGTGGGGGTTTTTGACCGGATTGAGGAAAAg < 1:12425915‑M1/35‑1 (MQ=255) AGGTGGTGGGGGTTTTTGACCGGATTGAGGAAAAg > 1:10874635‑M1/1‑35 (MQ=255) AGGTGGTGGGGGTTTTTGACCGGATTGAGGAAAAg > 1:13360686‑M1/1‑35 (MQ=255) AGGTGGTGGGGGTTTTTGACCGGATTGAGGAAAAg < 1:10350784‑M1/35‑1 (MQ=255) AGGTGGTGGGGGTTTTTGACCGGATTGAGGAAAAg > 1:15198347‑M1/1‑35 (MQ=255) AGGTGGTGGGGGTTTTTGACCGGATTGAGGAAAAg > 1:4480962‑M1/1‑35 (MQ=255) AGGTGGTGGGGGTTGTTGACCGGATTGAGGAAAAg > 1:17330895‑M1/1‑35 (MQ=255) AGGTGGGGGGGGTTTTTGACCGGATTGAGGAAAAg < 1:19477543‑M1/35‑1 (MQ=255) GGTGGTGGGGGTTTTTGACCGGATTGAGGAAAAGc > 1:4133989‑M1/1‑35 (MQ=255) GGTGGTGGGGGTTTTTGACCGGATTGAGGAAAAGc > 1:12916049‑M1/1‑35 (MQ=255) GGTGGTGGGGGTTTTTGACCGGATTGAGGAAAAGc > 1:18387520‑M1/1‑35 (MQ=255) gtggtgTGGGTTTTTGACCGGATTGAGGAAAAGCg > 1:13780085/1‑35 (MQ=255) gtggtgGGGGTTTTTGACCGGATTGAGGAAAAGCg < 1:14240698/35‑1 (MQ=255) gtggtgGGGGTTTTTGACCGGATTGAGGAAAAGCg < 1:15232432/35‑1 (MQ=255) tggtggGGGTTTTTGACCGGATTGAGGAAAAGCGt > 1:8160195‑M2/7‑35 (MQ=255) tggtggGGGTTTTTGACCGGATTGAGGAAAAGCGt < 1:7710718‑M2/29‑1 (MQ=255) tggtggGGGTTTTTGACCGGATTGAGGAAAAGCGt < 1:13446065‑M2/29‑1 (MQ=255) tggtggGGGTTTTTGACCGGATTGAGGAAAAGCGt < 1:4614025‑M2/29‑1 (MQ=255) ggtggGGGTTTTTGACCTGATTGAGGAAAAGCGTg > 1:14868717‑M2/6‑35 (MQ=255) ggtggGGGTTTTTGACCGGATTGAGGAAAAGCGTg < 1:10863333‑M2/30‑1 (MQ=255) ggtggGGGTTTTTGACCGGATTGAGGAAAAGCGTg > 1:7484719‑M2/6‑35 (MQ=255) gtggGGGTTTTTGACCGGATTGAGGAAAAGCGTGa > 1:6527427‑M2/5‑35 (MQ=255) gtggGGGTTTTTGACCGGATTGAGGAAAAGCGTGa < 1:19851596‑M2/31‑1 (MQ=255) tgtgggTTTTTGACCGGATTGAGGAAAAGCGTGAt > 1:6945057/4‑35 (MQ=255) tggGGGTTTTTGACCGGATTGAGGAAAAGCGTGAt < 1:8460306‑M2/32‑1 (MQ=255) tggGGGTTTTTGACCGGATTGAGGAAAAGCGTGAt < 1:8403665‑M2/32‑1 (MQ=255) ggGGGTTTTTGACCGGATTGAGGAAAAGCGTGATg > 1:12141444‑M2/3‑35 (MQ=255) ggGGGTTTTTGACCGGATTGAGGAAAAGCGTGATg > 1:17116813‑M2/3‑35 (MQ=255) ggGGGTTTTTGACCGGATTGAGGAAAAGCGTGATg > 1:16758939‑M2/3‑35 (MQ=255) ggGGGTTTTTGACCGGATTGAGGAAAAGCGTGATg > 1:15796366‑M2/3‑35 (MQ=255) ggGGGTTTTTGACCGGATTGAGGAAAAGCGTGATg < 1:543694‑M2/33‑1 (MQ=255) gGGGTTTTTGACCGGATTGAGGAAAAGCGTGATGc > 1:19519135‑M2/2‑35 (MQ=255) gGGGTTTTTGACCGGATTGAGGAAAAGCGTGATGc > 1:9373336‑M2/2‑35 (MQ=255) gGGGTTTTTGACCGGATTGAGGAAAAGCGTGATGc < 1:14413294‑M2/34‑1 (MQ=255) gGGGTTTTTGACCGGATTGAGGAAAACCGTGATGc > 1:14910801‑M2/2‑35 (MQ=255) gggTTTTTGACCGGATTGAGGAAAAGCGTGATGcc < 1:3240830/35‑1 (MQ=255) gggTTTTTGACCGGATTGAGGAAAAGCGTGATGcc < 1:16346977/35‑1 (MQ=255) gggCTTTTGACCGGATTGAGGAAAAGCGTGATGcc > 1:12386603/1‑35 (MQ=255) | GAGAAAGTTATTGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGACCGGATTGAGGAAAAGCGTGATGCC > REL606/3006426‑3006494 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |