New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 929308 = | 57 (0.550) | 8 (0.120) | 3/32 | NT | 13.8% | coding (1214/1653 nt) | hcp | hydroxylamine reductase |
? | REL606 | = 3040633 | 62 (0.910) | coding (654/810 nt) | pppA | bifunctional prepilin leader peptidase/ methylase |
Only 100 of 124 total aligned reads displayed.
GGTGAAGTAGTGGCGCTCGCCGCGTGCGCCGTCACAGCCACCAAGCAGGAAGATATGACGCAGTTTTTC > REL606/929274‑929342 | ggTGAAGTAGTGGCGCTCGCCGCGTGCGCCGTcac > 1:5029517/1‑35 (MQ=255) ggTGAAGTAGTGGCGCTCGCCGCGTGCGCCGTcac > 1:3290347/1‑35 (MQ=255) ggTGAAGTAGTGGCGCTCGCCGCGTGCGCCGTcac < 1:2668365/35‑1 (MQ=255) ggTGAAGTAGTGGCGCTCGCCGCGTGCGCCGTcac > 1:17456838/1‑35 (MQ=255) gTGAAGTAGTGGCGCTCGCCGCGTGCGCCGTcaca < 1:14672457/35‑1 (MQ=255) gTGAAGTAGTGGCGCTCGCCGCGTGCGCCGTcaca < 1:15619564/35‑1 (MQ=255) gTGAAGTAGTGGCGCTCGCCGCGTGCGCCGTcaca < 1:6115469/35‑1 (MQ=255) gTGAAGTAGTGGCGCTCGCCGCGTGCGCCGTcaca < 1:20524463/35‑1 (MQ=255) gTGAAGTAGTGGCGCTCGCCGCGTGCGCCGTcaca > 1:12872574/1‑35 (MQ=255) gTGAAGTAGTGGCGCTCGCCGCGTGCGCAGTcaca < 1:1463744/35‑1 (MQ=255) tGAAGTAGTGGCGCTCGCCGCGTGCGCCGTCACAg < 1:1778788/35‑1 (MQ=255) tGAAGTAGTGGCGCTCGCCGCGTGCGCCGTCACAg < 1:2376666/35‑1 (MQ=255) tGAAGTAGTGGCGCTCGCCGCGTGCGCCGTCACAg < 1:18144481/35‑1 (MQ=255) gAAGTAGTGGCGCTCGCCGCGTGCGCCGTCACAGc < 1:7748632/35‑1 (MQ=255) gAAGTAGTGGCGCTCGCCGCGTGCGCCGTCACAGc < 1:20046958/35‑1 (MQ=255) aaGTAGTTGCGCTCGCCGCGTGCGCCGTCACAGcc > 1:2987534/1‑35 (MQ=255) aaGTAGTGGCGCTCGCCGCGTGCGCCGTCACAGcc > 1:18019497/1‑35 (MQ=255) aaGTAGTGGCGCTCGCCGCGTGCGCCGTCACAGcc > 1:14413915/1‑35 (MQ=255) agtagtGGCGCTCGCCGCGTGCGCCGTCACAGcca > 1:14795309/1‑35 (MQ=255) ttagtGCCGCTCGCCGCGTGCGCCGTCACAGccac > 1:9049536/2‑35 (MQ=255) agtGGCGCTCGCCGCGTGCGCCGTCACAGccacca > 1:9669211/1‑35 (MQ=255) agtGGCGCTCGCCGCGTGCGCCGTCACAGccacca > 1:12405324/1‑35 (MQ=255) tGGCGCTCGCCGCGTGCGCCGTCACAGCCACCAAg > 1:10328111/1‑35 (MQ=255) ggCGCTCGCCGCGTGCGCCGTCACAGCCACCAAGc > 1:12995074/1‑35 (MQ=255) ggCGCTCGCCGCGTGCGCCGTCACAGCCACCAAGc > 1:14057786/1‑35 (MQ=255) ggCGCTCGCCGCGTGCGCCGTCACAGCCACCAAGc > 1:8413915/1‑35 (MQ=255) gcgcTCGCCGCGTGCGCCGTCACAGCCACCAAGCa > 1:1956966/1‑35 (MQ=255) cgcTCGCCGCGTGCGCCGTCACAGCCACCAAGCAg > 1:12939049/1‑35 (MQ=255) cgcACGCCGCGTGCGCCGTCACAGCCACTAAGCAg > 1:8807465/1‑35 (MQ=37) gcTCGCCGCGTGCGCCGTCACAGCCACCAAGCAgg > 1:14825319/1‑35 (MQ=255) gcTCGCCGCGTGCGCCGTCACAGCCACCAAGCAgg > 1:10445983/1‑35 (MQ=255) gcTCGCCGCGTGCGCCGTCACAGCCACCAAGCAgg > 1:4722398/1‑35 (MQ=255) gcTCGCCGCGTGCGCCGTCACAGCCACCAAGCAgg > 1:5734798/1‑35 (MQ=255) gcTCGCCGCGTGCGCCGTCACAGCCACCAAGCAgg > 1:6861871/1‑35 (MQ=255) gcTCGCCGCGTGCGCCGTCACAGCCACCAAGCAgg > 1:7706907/1‑35 (MQ=255) gcTCGCCGCGTGCGCCGTCACAGCCACCAAGCAgg > 1:13445059/1‑35 (MQ=255) cTCGCCGCGTGCGCCGTCACAGCCACCAAGCAGGa > 1:492524/1‑35 (MQ=255) tCGCCGCGTGCGCCGTCACAGCCACCAAGCAGGaa > 1:19255895/1‑35 (MQ=255) cgccgcGTGCGCCGTCACAGCCACCAAGCAGGAAg > 1:18731816/1‑35 (MQ=255) cgccgcGTGCGCCGTCACAGCCACCAAGCAGGAAg > 1:19995351/1‑35 (MQ=255) gccgcGTGCGCCGTCACAGCCACCAAGCAGGAAGa > 1:712608/1‑35 (MQ=255) ccgcGTGCGCCGTCACAGCCACCAAGCAGGAAGat > 1:5426889/1‑35 (MQ=255) cgcgTGCGCCGTCACATCCACCAAGCAGGAAGata > 1:15440153/1‑35 (MQ=255) gcgTGCGCCGTCACAGCCACCAAGCAGGAAGatat > 1:2995119/1‑35 (MQ=255) gcgTGCGCCGTCACAGCCACCAAGCAGGAAGatat > 1:16152997/1‑35 (MQ=255) gcgTGCGCCGTCACAGCCACCAAGCAGGAAGatat > 1:20318896/1‑35 (MQ=255) gcgcgcCGCCCCAGCCACCAAGCAGGAAGATATGa < 1:2258735/33‑1 (MQ=25) gTGCGCCGTCACAGCCACCAAGTAGGAAGATATGa > 1:7317317/1‑35 (MQ=255) gTGCGCCGTCACAGCCACCAAGCAGGAAGATATGa > 1:8312176/1‑35 (MQ=255) gTGCGCCGTCACAGCCACCAAGCAGGAAGATATGa > 1:7225454/1‑35 (MQ=255) gTGCGCCGTCACAGCCACCAAGCAGGAAGATATGa > 1:9727533/1‑35 (MQ=255) tGCGCCGTCACAGCCACCAAGCAGGAAGATATGAc > 1:6539138/1‑35 (MQ=255) tGCGCCGTCACAGCCACCAAGCAGGAAGATATGAc > 1:13611324/1‑35 (MQ=255) tGCGCCGTCACAGCCACCAAGCAGGAAGATATGAc > 1:5071319/1‑35 (MQ=255) tGCGCCGTCACAGCCACCAAGCAGGAAGATATGAc > 1:4546621/1‑35 (MQ=255) gcgcCGTCACAGCCACCAAGCAGGAAGATATGACg > 1:9119875/1‑35 (MQ=255) gcgcCGTCACAGCCACCAAGCAGGAAGATATGACg > 1:12566939/1‑35 (MQ=255) gcgcCGTCACAGCCACCAAGCAGGAAGATATGACg > 1:7526256/1‑35 (MQ=255) gccccccccCAGCCACCAAGCAGGAAGATATGACg > 1:18405914‑M1/10‑35 (MQ=255) cgcCGTCACAGCCACCAAGCAGGAAGATATGACGc > 1:13251310/1‑35 (MQ=255) ccccccccCAGCCACCAAGCAGGAAGATATGACGc > 1:10088027‑M1/9‑35 (MQ=255) ccccccccCAGCCACCAAGCAGGAAGATATGACGc > 1:1236225‑M1/9‑35 (MQ=255) gcCGTCACAGCCACCAAGCAGGAAGATATGACGCa > 1:148580/1‑35 (MQ=255) gcCGCCCCAGCCACCAAGCAGGAAGATATGACGCa < 1:13644336/35‑1 (MQ=37) cccccccCAGCCACCAAGCAGGAAGATATGACGCa > 1:12064066‑M1/8‑35 (MQ=255) cccccccCAGCCACCAAGCAGGAAGATATGACGCa > 1:12978814‑M1/8‑35 (MQ=255) cccccccCAGCCACCAAGCAGGAAGATATGACGCa > 1:18643903‑M1/8‑35 (MQ=255) ccGTCACAGCCACCAAGCAGGAAGATATGACGCAg > 1:3430089/1‑35 (MQ=255) ccGTCACAGCCACCAAGCAGGAAGATATGACGCAg > 1:14568790/1‑35 (MQ=255) ctcccCAGCCACCAAGCAGGAAGATATGACGCAGt > 1:7910823‑M1/6‑35 (MQ=255) cctCACAGCCACCAAGCAGGAAGATATGACGCAGt < 1:161951/33‑1 (MQ=255) cccccCAGCCACCAAGCAGGAAGATATGACGCAGt > 1:2863724‑M1/6‑35 (MQ=255) cGTCACAGCCACCAAGCAGGAAGATATGACGCAGt > 1:12836765/1‑35 (MQ=255) cGTCACAGCCACCAAGCAGGAAGATATGACGCAGt > 1:5126965/1‑35 (MQ=255) cGTCACAGCCACCAAGCAGGAAGATATGACGCAGt > 1:5772337/1‑35 (MQ=255) gTCACAGCCACCAAGCAGGAAGATATGACGCAGtt > 1:7732512/1‑35 (MQ=255) gTCACAGCCACCAAGCAGGAAGATATGACGCAGtt > 1:8501259/1‑35 (MQ=255) ccccCAGCCACCAAGCAGGAAGATATGACGCAGtt > 1:10921807‑M1/5‑35 (MQ=255) ccccCAGCCACCAAGCAGGAAGATATGACGCAGtt > 1:13805929‑M1/5‑35 (MQ=255) tCACAGCCACCAAGCAGGAAGATATGACGCAGttt > 1:16385864/1‑35 (MQ=255) tCACAGCCACCAAGCAGGAAGATATGACGCAGttt > 1:15565086/1‑35 (MQ=255) tCACAGCCACCAAGCAGGAAGATATGACGCAGttt > 1:37427/1‑35 (MQ=255) cccCAGCCACCAAGCAGGAAGATATGACGCAGttt > 1:13517933‑M1/4‑35 (MQ=255) acacaGCCACCAAGCAGGAAGATATGACGCAGttt < 1:2401779/34‑1 (MQ=255) ccCAGCCACCAAGCAGGAAGATATGACGCAGtttt > 1:6610857‑M1/3‑35 (MQ=255) ccCAGCCACCAAGCAGGAAGATATGACGCAGtttt > 1:17370305‑M1/3‑35 (MQ=255) ccCAGCCACCAAGCAGGAAGATATGACGCAGtttt > 1:16795657‑M1/3‑35 (MQ=255) cacaGCCACCAAGCAGGAAGATATGACGCAGtttt > 1:1829580/1‑35 (MQ=255) cacaGCCACCAAGCAGGAAGATATGACGCAGtttt > 1:16480131/1‑35 (MQ=255) cCAGCCACCAAGCAGGAAGATATGACGCAGttttt > 1:1005664‑M1/2‑35 (MQ=255) acaGCCACCAAGCAGGAAGATATGACGCAGttttt > 1:11293858/1‑35 (MQ=255) acaGCCACCAAGCAGGAAGATATGACGCAGttttt > 1:3357767/1‑35 (MQ=255) acaGCCACCAAGCAGGAAGATATGACGCAGttttt > 1:9195381/1‑35 (MQ=255) acaGCCACCAAGCAGGAAGATATGACGCAGttttt > 1:9452096/1‑35 (MQ=255) CAGCCACCAAGCAGGAAGATATGACGCAGTTTTTc > 1:13162233‑M1/1‑35 (MQ=255) CAGCCACCAAGCAGGAAGATATGACGCAGTTTTTc < 1:17668492‑M1/35‑1 (MQ=255) CAGCCACCAAGCAGGAAGATATGACGCAGTTTTTc > 1:2985392‑M1/1‑35 (MQ=255) CAGCCACCAAGCAGGAAGATATGACGCAGTTTTTc < 1:16079966‑M1/35‑1 (MQ=255) CAGCCACCAAGCAGGAAGATATGACGCAGTTTTTc < 1:9423549‑M1/35‑1 (MQ=255) CAGCCACCAAGCAGGAAGATATGACGCAGTTTTTc < 1:4516807‑M1/35‑1 (MQ=255) | GGTGAAGTAGTGGCGCTCGCCGCGTGCGCCGTCACAGCCACCAAGCAGGAAGATATGACGCAGTTTTTC > REL606/929274‑929342 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |