New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2671676 = | 67 (0.650) | 9 (0.120) | 3/36 | NT | 13.7% | coding (328/594 nt) | grpE | heat shock protein |
? | REL606 | 4487631 = | 63 (0.820) | coding (453/1119 nt) | yjhC | predicted oxidoreductase |
CCGGTGATTGATAGCCTGGATCGTGCGCTGGAAGTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2671715‑2671676 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAG > REL606/4487631‑4487664 CCGGTGATTGATAGCCTGGATCGTGCGCTGGAAGT < 1:5011810/35‑1 CCGGTGATTGATAGCCTGGATCGTGCGCTGGAAGT < 1:5360594/35‑1 CGGTGATTGATAGCCTGGATCGTGCGCTGGAAGTG > 1:9748743/1‑35 CGGTGATTGATAGCCTGGATCGTGCGCTGGAAGTG > 1:14397098/1‑35 GGTGATTGATAGCCTGGATCGTGCGCTGGAAGTGG < 1:16147248/35‑1 GGTGATTGATAGCCTGGATCGTGCGCTGGAAGTGG > 1:12429366/1‑35 GTGATTGATAGCCTGGATCGTGCGCTGGAAGTGGC < 1:2605182/35‑1 GTGATTGATAGCCTGGATCGTGCGCTGGAAGTGGC < 1:7091360/35‑1 TGATTGGTAGCCTGGATCGTGCGCTGGAAGTGGCT < 1:18168683/35‑1 TGATTGATAGCCTGGATCGTGCGCTGGAAGTGGCT < 1:2382873/35‑1 TGATTGATAGCCTGGATCGTGCGCTGGAAGTGGCT < 1:1535150/35‑1 TGATTGATAGCCTGGATCGTGCGCTGGAAGTGGCT < 1:15151276/35‑1 TGATTGATAGCCTGGATCGTGCGCTGGAAGTGGCT < 1:5831382/35‑1 TGATTGATAGCCTGGATCGTGCGCTGGAAGTGGCT < 1:10874045/35‑1 TGATTGATAGCCTGGATCGTGCGCTGGAAGTGGCT > 1:980350/1‑35 nnTTGNNAGCCTGGATCGTGCGCTGGAAGTGGCTG < 1:19714097/33‑1 GATTGATAGCCTGGATCGTGCGCTGGAAGTGGCTG > 1:15643978/1‑35 GATTGATAGCCTGGATCGTGCGCTGGAAGTGGCTG > 1:13942139/1‑35 GATTGATAGCCTGGATCGTGCGCTGGAAGTGGCTG < 1:7721059/35‑1 GATTGATAGCCTGGATCGTGCGCTGGAAGTGGCTG > 1:8443188/1‑35 GATTGATAGCCTGGATCGTGCGCTGGAAGTGGCTG < 1:9585492/35‑1 ATTGATAGCCTGGATCGTGCGCTGGAAGTTGCTGG > 1:4234472/1‑35 ATTGATAGCCTGGATCGTGCGCTGGAAGGGGCTGG > 1:10651731/1‑35 TTGATAGCCTGGATCGTGCGCTGGAAGTGGCTGGG > 1:15979654/1‑35 TTGATAGCCTGGATCGTGCGCTGGAAGGGGCTGGG > 1:6040154/1‑35 TGATAGCCTGGATCGTGCGCTGGAAGTGGCTGGGA > 1:12690684/1‑35 GATAGCCTGGATCGTGCGCTGGAAGTGGCTGGGga > 1:17651722/1‑33 GATAGCCTGGATCGTGCGCTGGAAGTGGCTGGAAA > 1:6839753/1‑35 TAGCCTGGATCGTGCGCTGGAAGTGGCTGGGAAAA > 1:291729/1‑35 AGCCTGGATCGTGCGCTGGAAGTGGCTGGGGAAAa > 1:3222987/1‑34 AGCCTGGATCGTGCGCTGGAAGTGGCTGGGGAAAa > 1:402973/1‑34 AGCCTGGATCGTGCGCTGGAAGTGGCTGGGAAAga > 1:6032038/1‑33 AGCCTGGATCGTGCGCTGGAAGTGGCTGGGAAAAC > 1:4655392/1‑35 GCCTGGATCGTGCGCTGGAAGTGGCTGGGAAAAgc > 1:4092945/1‑33 CCTGGATCGTGCGCTGGAAGTGGCTGGGAAAAatc > 1:5657704/1‑32 CCTGGATCGTGCGCTGGAAGTGGCTGGGAAAAaca > 1:7584250/1‑32 CCTGGATCGTGCGCTGGAAGTGGCTGGGAAAAGAA > 1:3129425/1‑35 GGATCGTGCGCTGGAAGTGGCTGGGAAAACAAAac > 1:4401152/1‑33 TGGCTGGGAAAACAAACAAGAGAGACTTTCCTGGA < 1:815512/35‑1 TGGCTGGGAAAACAAACAAGAGAGACTTTCCTGGA < 1:11680106/35‑1 TGGCTGGGAAAACAAACAAGAGAGACTTTCCTGGA > 1:18165997/1‑35 TGGCTGGGAAAACAAACAAGAGAGACTTTCCTGGA > 1:6843980/1‑35 TGGCTGGGAAAACAAACAAGAGAGACTTTCCTGGA < 1:25306/35‑1 GGCTGGGAAAACAAACAAGAGAGATTTTCCTGGAA > 1:14132382/1‑35 GGCTGGGAAAACAAACAAGAGAGACTTTCCTGGAA < 1:20089557/35‑1 GGCTGGGAAAACAAACAAGAGAGACTTTCCTGGAA > 1:8432220/1‑35 GGCTGGGAAAACAAACAAGAGAGACTTTCCTGGAA > 1:12096305/1‑35 GGCTGGGAAAACAAACAAGAGAGACTTTCCTGGAA > 1:5995362/1‑35 GGCTGGGAAAACAAACAAGAGAGACTTTCCTGGAA > 1:11639073/1‑35 GGCTGGGAAAACAAACAAGAGAGAATTTCCTGGAA < 1:16247391/35‑1 GCTGGGAAAACAAACAAGAGAGACTTTCCTGGAAA > 1:2486165/1‑35 GCTGGGAAAACAAACAAGAGAGACTTTCCTGGAAA > 1:380091/1‑35 CTGGGAAAACAAACAAGAGAGACTTTCCTGGAAAA > 1:2542724/1‑35 CTGGGAAAACAAACAAGAGAGACTTTCCTGGAAAA < 1:817492/35‑1 CTGGGAAAACAAACAAGAGAGACTTTCCTGGAAAA > 1:8097009/1‑35 TGGGAAAACAAACAAGAGAGACTTTCCTGGAAAAA < 1:9017312/35‑1 TGGGAAAACAAACAAGAGAGACTTTCCTGGAAAAA > 1:8286238/1‑35 TGGGAAAACAAACAAGAGAGACTTTCCTGGAAAAA < 1:12354146/35‑1 TGGGAAAACAAACAAGAGAGACTTTCCTGGAAAAA > 1:6813643/1‑35 TGGGAAAACAAACAAGAGAGACTTTCCTGGAAAAA > 1:18644183/1‑35 TGGGAAAACAAACAAGAGAGACTTTCCTGGAAAAA < 1:3755748/35‑1 TGGGAAAACAAACAAGAGAGACTTTCCTGGAAAAA < 1:3809230/35‑1 GGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAG < 1:19773576/35‑1 GGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAG > 1:5482224/1‑35 GGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAG < 1:9630076/35‑1 GGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAG > 1:9662718/1‑35 GGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAG > 1:18924994/1‑35 CCGGTGATTGATAGCCTGGATCGTGCGCTGGAAGTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2671715‑2671676 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAG > REL606/4487631‑4487664 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |