New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1332936 = | 97 (0.940) | 12 (0.150) | 5/38 | NT | 15.3% | coding (710/975 nt) | cysB | DNA‑binding transcriptional dual regulator, O‑acetyl‑L‑serine‑binding |
? | REL606 | = 2871320 | 56 (0.690) | coding (101/1032 nt) | galR | DNA‑binding transcriptional repressor |
Only 100 of 178 total aligned reads displayed.
GATGCTGACGTCATTAAAACTTACGTCCGGTTAGGGCTGGGGGTAGGGGTCATTGCCAGCATGGCGGTG > REL606/1332902‑1332970 | gATGCTGACGTCATTAAAACTTACGTCCGGTTAgg > 1:16092672/1‑35 (MQ=255) gATGCTGACGTCATTAAAACTTACGTCCGGTTAgg > 1:5247026/1‑35 (MQ=255) gATGCTGACGTCATTAAAACTTACGTCCGGTTAgg < 1:5674263/35‑1 (MQ=255) ataattcacctaaagccagtgaagcttcccggctg < 1:14392096‑M1/1‑1 (MQ=255) ataattcacctaaagccagtgaagcttcccggctg > 1:12315878‑M1/35‑35 (MQ=255) taattcacctaaagccagtgaagcttccctgctgg < 1:9341445‑M1/2‑1 (MQ=255) aTGCTGACGTCATTAAAACTTACGTCCGGTTAggg > 1:1967042/1‑35 (MQ=255) aTGCTGACGTCATTAAAACTTACGTCCGGTTAggg > 1:11540109/1‑35 (MQ=255) tGCTGACGTCATTAAAACTTACGTCCGGCTAGGGc < 1:7593720/35‑1 (MQ=255) aattcacctaaagccagtgaagcttcccggctggc < 1:3531552‑M1/3‑1 (MQ=255) aattcacctaaagccagtgaagcttcccggctggc < 1:5615524‑M1/3‑1 (MQ=255) attcacctaaagccagtgaagcttcccggctggct > 1:19074617‑M1/32‑35 (MQ=255) attcacctaaagccagtgaagcttcccggctggct > 1:19404827‑M1/32‑35 (MQ=255) attcacctaaagccagtgaagcttcccggctggct < 1:18758958‑M1/4‑1 (MQ=255) ttcacctaaagccagtgaagcttcccggcttgctg < 1:5957547‑M1/5‑1 (MQ=255) ttcacctaaagccagtgaagcttcccggctggctg < 1:17686168‑M1/5‑1 (MQ=255) tcacctaaagccattgaagcttcccggctggctgg < 1:2008120‑M1/6‑1 (MQ=255) tGACGTCATTAAAACTTACGTCCGGTTAGGGCTgg < 1:20403649/35‑1 (MQ=255) tGACGTCATTAAAACTTACGTCCGGTTAGGGCTgg < 1:3689766/35‑1 (MQ=255) taCGTCATTAAAACTTACGTCCGGTTAGGGCTggg > 1:15612452/2‑35 (MQ=255) gACGTCATTAAAACTTACGTCCGGTTAGGGCTggg < 1:1027446/35‑1 (MQ=255) gACGTCATTAAAACTTACGTCCGGTTAGGGCTggg > 1:18663052/1‑35 (MQ=255) gACGTCATTAAAACTTACGTCCGGTTAGGGCTggg < 1:17391270/35‑1 (MQ=255) gACGTCATTAAAACTTACGTCCGGTTAGGGCTggg > 1:5130504/1‑35 (MQ=255) gACGTCATTAAAACTTACGTCCGGTTAGGGCTggg < 1:15057825/35‑1 (MQ=255) gACGTCATTAAAACTTACGTCCGGTTAGGGCTggg < 1:9357143/35‑1 (MQ=255) aCGTCATTAAAACTTACGTCCGGTTAGGGCTgggg < 1:1068059/35‑1 (MQ=255) aCGTCATTAAAACTTACGTCCGGTTAGGGCTgggg < 1:13609902/35‑1 (MQ=255) aCGTCATTAAAACTTACGTCCGGTTAGGGCTgggg < 1:3359641/35‑1 (MQ=255) cctaaagccagtgaagcttcccggctGGCTggggg < 1:11569582‑M1/9‑1 (MQ=255) cGTCATTAAAACTTACGTCCGGTTAGGGCTggggg > 1:1465170/1‑35 (MQ=255) cGTCATTAAAACTTACGTCCGGTTAGGGCTggggg < 1:5996015/35‑1 (MQ=255) gTCATTAAAACTTACGTCCGGTTAGGGCTGGGGGt > 1:10956779/1‑35 (MQ=255) gTCATTAAAACTTACGTCCGGTTAGGGCTGGGGGt > 1:17184590/1‑35 (MQ=255) ctaaagccagtgaagcttcccggctGGCtgggggg < 1:15244839‑M1/10‑2 (MQ=255) ctaaagccagtgaagcttcccggctGGCtggggga < 1:20190005‑M1/10‑2 (MQ=255) taaagccagtgaagcttcccggctGGCTGGGGGTa < 1:20320243‑M1/11‑1 (MQ=255) taaagccagtgaagcttcccggctGGCTGGGGGTa < 1:10503289‑M1/11‑1 (MQ=255) tCATTAAAACTTACGTCCGGTTAGGGCTGGGGGTa > 1:16650861/1‑35 (MQ=255) tCATTAAAACTTACGTCCGGTTAGGGCTGGGGGTa > 1:3030054/1‑35 (MQ=255) cATTAAAACTTACGTCCGGTTAGGGCTTGGGGTAg > 1:19994947/1‑35 (MQ=255) cATTAAAACTTACGTCCGGTTAGGGCTGGGGGTAg > 1:2854425/1‑35 (MQ=255) cATTAAAACTTACGTCCGGTTAGGGCTGGGGGTAg < 1:10137929/35‑1 (MQ=255) aaagccagtgaagcttcccggctGGCTGGGCGTAg < 1:152075‑M1/12‑1 (MQ=255) aagccagtgaagcttcccggctGGCTGGGGGTagt < 1:1416064‑M1/13‑2 (MQ=255) aagccagtgaagcttcccggctGGCTGGGGGTagt < 1:8654104‑M1/13‑2 (MQ=255) aagccagtgaagcttcccggctGGCTGGGGGGAgg < 1:13074805‑M1/13‑1 (MQ=255) aTTAAAACTTACGTCCTGTTAGGGCTGGGGGTAgg > 1:2399943/1‑35 (MQ=255) aTTAAAACTTACGTCCTGTTAGGGCTGGGGGTAgg > 1:9714330/1‑35 (MQ=255) aTTAAAACTTACGTCCGGTTAGGGCTGGGGGTAgg < 1:11344020/35‑1 (MQ=255) aTTAAAACTTACGTCCGGTTAGGGCTGGGGGTAgg > 1:8265184/1‑35 (MQ=255) aTTAAAACTTACGTCCGGTTAGGGCTGGGGGTAgg < 1:4980999/35‑1 (MQ=255) ttAAAACTTACGTCCGGTTAGGGCTGGGGGTAggg > 1:10023211/1‑35 (MQ=255) ttAAAACTTACGTCCGGTTAGGGCTGGGGGTAggg > 1:16758360/1‑35 (MQ=255) agccagtgaagcttcccggctGGCTGGGGGTAggg < 1:9313639‑M1/14‑1 (MQ=255) agccagtgaagcttcccggctGGCTGGGGGTAggg < 1:1480182‑M1/14‑1 (MQ=255) tAAAACTTACGTCCGGTTAGGGCTGGGGGTAgggg > 1:9543942/1‑35 (MQ=255) tAAAACTTACGTCCGGTTAGGGCTGGGGGTAgggg < 1:8273775/35‑1 (MQ=255) tAAAACTTACGTCCGGTTAGGGCTGGGGGTAgggg > 1:4855188/1‑35 (MQ=255) tAAAACTTACGTCCGGTTAGGGCTGGGGGTAgggg < 1:4553757/35‑1 (MQ=255) aaaaCTTACGTCCGGTTAGGGCTGGGGGTAGGGGt < 1:19554402/35‑1 (MQ=255) aaaaCTTACGTCCGGTTAGGGCTGGGGGTAGGGGt < 1:12641988/35‑1 (MQ=255) aaaCTTACGTCCGGTTAGGGCTGGGGGTAGGGGTc > 1:1881379/1‑35 (MQ=255) aaCTTACGTCCGGTTAGGGCTGGGGGTAGGGGTCa > 1:9353742/1‑35 (MQ=255) aCTTACGTCCGGTTAGGGCTGGGGGTAGGGGTCAt < 1:11281867/35‑1 (MQ=255) aCTTACGTCCGGTTAGGGCTGGGGGTAGGGGTCAt < 1:5325217/35‑1 (MQ=255) cTTACGTCCGGTTAGGGCTGGGGGTAGGGGTCAtt < 1:18205970/35‑1 (MQ=255) cTTACGTCCGGTTAGGGCTGGGGGTAGGGGTCAtt > 1:1781681/1‑35 (MQ=255) cTTACGTCCGGTTAGGGCTGGGGGTAGGGGTCAtt < 1:11194352/35‑1 (MQ=255) cTTACGTCCGGTTAGGGCTGGGGGGAGGGGTCAtt > 1:17346986/1‑35 (MQ=255) cTTACGTCCGGTTAGGGCTGGGCGGAGGGGGCAtt > 1:5897375/1‑35 (MQ=25) ttACGTCCGGTTAGTGCTGGGGGTAGGGGTCATTg > 1:10862315/1‑35 (MQ=255) tACGTCCGGTTAGGGCTGGGGGTAGGGGTCATTGc < 1:7000106/35‑1 (MQ=255) aCGTCCGGTTAGGGCTGGGGGTAGGGGTCATTGcc > 1:18927786/1‑35 (MQ=255) cGTCCGGTTAGGGCTGGGGGTAGGGGTCATTGCCa > 1:7893127/1‑35 (MQ=255) cGTCCGGTTAGGGCTGGGGGTAGGGGTCATTGCCa < 1:3117267/35‑1 (MQ=255) cGTCCGGTTAGGGATGGGGGTAGGGGTCATTGCCa < 1:13466632/35‑1 (MQ=255) gTCCGGTTAGGGCTGGGGGTAGGGGTCATTGCCAg > 1:17972294/1‑35 (MQ=255) tCCGGTTAGGGCTGGGGGTAGGGGTCATTGCCAGc < 1:8961208/35‑1 (MQ=255) tCCGGTTAGGGCTGGGGGTAGGGGTCATTGCCAGc > 1:468607/1‑35 (MQ=255) tCCGGTTAGGGCTGGGGGTAGGGGTCATTGCCAGc < 1:1205969/35‑1 (MQ=255) nngnTNNGGGCTGGGGGTAGGGGTCATTGCCAGCa < 1:2423871/33‑1 (MQ=38) ccGGTTAGGGCTGGGGGTAGGGGTCATTGCCAGCa < 1:10691967/35‑1 (MQ=255) ccGGTTAGGGCTGGGGGTAGGGGTCATTGCCAGCa < 1:7450996/35‑1 (MQ=255) cGGTTAGGGCTGGGGGTAGGGGTCATTGCCAGCAt > 1:16258656/1‑35 (MQ=255) cGGTTAGGGCTGGGGGTAGGGGTCATTGCCAGCAt > 1:6857470/1‑35 (MQ=255) cGGTTAGGGCTGGGGGTAGGGGTCATTGCCAGCAt < 1:5439111/35‑1 (MQ=255) cGGTTAGGGATGGGGGTAGGGGTCATTGCAAGCAt < 1:11508388/35‑1 (MQ=38) ggTTAGGGCTGGGGGTAGGGGTCATTGCCAGCATg > 1:17247166/1‑35 (MQ=255) gTTAGGGCTGGGGGTAGGGGTCATTGCCAGCATgg > 1:2902516/1‑35 (MQ=255) ttAGGGCTGGGGGTAGGGGTCATTGCCAGCATGGc > 1:5954240/1‑35 (MQ=255) tAGGGCTGGGGGTAGGGGTCATTGCCAGCATGGCg < 1:13343106/35‑1 (MQ=255) tAGGGCTGGGGGTAGGGGTCATTGCAAGCATGGCg < 1:8056033/35‑1 (MQ=255) tAGGGCTCGGGGTAGGGGTCATTGCCAGCATGGCg > 1:19845897/1‑35 (MQ=255) aGGGCTGGGGGTAGGGGTCATTGCCAGCATGGCgg > 1:12793965/1‑35 (MQ=255) aGGGCTGGGGGTAGGGGTCATTGCCAGCATGGCgg > 1:10718655/1‑35 (MQ=255) GGCTGGGGGTAGGGGTCATTGCCAGCATGgcgggg < 1:14003197‑M1/35‑3 (MQ=255) GGCTGGGGGTAGGGGTCATTGCCAGCATGgcgggg < 1:12923166‑M1/35‑3 (MQ=255) GGCTGGGGGTAGGGGTCATTGCCAGCATGGCGGTg > 1:14878969‑M1/1‑35 (MQ=255) GGCTGGGGGTAGGGGTCATTGCCAGCATGGCGGTg > 1:16590535‑M1/1‑35 (MQ=255) | GATGCTGACGTCATTAAAACTTACGTCCGGTTAGGGCTGGGGGTAGGGGTCATTGCCAGCATGGCGGTG > REL606/1332902‑1332970 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |