Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 546,191 | IS1 (+) +9 bp | 100% | coding (346‑354/384 nt) | ybcQ → | predicted antitermination protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 546191 = | 0 (0.000) | 77 (0.780) | 35/46 | NT | 100% | coding (346/384 nt) | ybcQ | predicted antitermination protein |
? | REL606 | 546932 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
* | ? | REL606 | = 546199 | 0 (0.000) | 125 (1.220) | 42/48 | NT | 100% | coding (354/384 nt) | ybcQ | predicted antitermination protein |
? | REL606 | = 547699 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region |
Only 100 of 151 total aligned reads displayed.
CTTCATACTCATAAGTAGTGGAGAAACCGAAACCGGTAATGACTCCAACTTATTGATAGTGTTTTA > REL606/546898‑546963 | cTTCATACTCATAAGTAGTGGAGaaaccgaaaccg < 1:19208413/35‑1 (MQ=255) ttCATACTCATAAGTAGTGGAGAAACCGAAACCgg < 1:3078746/35‑1 (MQ=255) ttCATACTCATAAGTAGTGGAGAAACCGAAACCgg > 1:1388580/1‑35 (MQ=255) tCATACTCATAAGTAGTGGAGAAACCGAAACCGGt > 1:20463837/1‑35 (MQ=255) tCATACTCATAAGTAGTGGAGAAACCGAAACCGGt > 1:15598755/1‑35 (MQ=255) tCATACTCATAAGTAGTGGAGAAACCGAAACCGGt < 1:16454488/35‑1 (MQ=255) tCATACTCATAAGTAGTGGAGAAACCGAAACCGGt > 1:8048689/1‑35 (MQ=255) tCATACTCATAAGTAGTGGAGAAACCGAAACCGGt > 1:17056822/1‑35 (MQ=255) cATACTCATAAGTAGTGGAGAAACCGAAACCGGTa < 1:13340779/35‑1 (MQ=255) cATACTCATAAGTAGTGGAGAAACCGAAACCGGTa < 1:6915495/35‑1 (MQ=255) aTACTCATAAGTAGTGGAGAAACCGAAACCGGTaa > 1:3660655/1‑35 (MQ=255) tACTCATAAGTAGTGGAGAAACCGAAACCGGTAAt < 1:19935868/35‑1 (MQ=255) tACTCATAAGTAGTGGAGAAACCGAAACCGGTAAt > 1:6077491/1‑35 (MQ=255) tACTCATAAGTAGTGGAGAAACCGAAACCGGTAAt > 1:5132146/1‑35 (MQ=255) tACCCAAAAGTAGTGGAGAAACCGAAACCGGTAAt < 1:13949783/35‑1 (MQ=37) aCTCATAAGTAGTGGAGAAACCGAAACCGGTAATg < 1:7647706/35‑1 (MQ=255) aCTCATAAGTAGTGGAGAAACCGAAACCGGTAATg > 1:11026360/1‑35 (MQ=255) aCTCATAAGTAGTGGAGAAACCGAAACCGGTAATg > 1:3581887/1‑35 (MQ=255) aCTCATAAGTAGTGGAGAAACCGAAACCGGTAATg > 1:18805126/1‑35 (MQ=255) aCTCATAAGTAGTGGAGAAACCGAAACCGGTAATg > 1:2423649/1‑35 (MQ=255) tCATAAGTAGTGGAGAAACCGAAACCGGTAATGAc > 1:17409862/1‑35 (MQ=255) tCATAAGTAGTGGAGAAACCGAAACCGGTAATGAc < 1:17924796/35‑1 (MQ=255) tCATAAGTAGTGGAGAAACCGAAACCGGTAATGAc < 1:10395596/35‑1 (MQ=255) cATAAGTAGTGTAGAAACCGAAACCGGTAATGACt > 1:7674306/1‑35 (MQ=255) cATAAGTAGTGGAGAAACCGAAACCGGTAATGACt > 1:17135871/1‑35 (MQ=255) cATAAGTAGTGGAGAAACCGAAACCGGTAATGACt > 1:15558508/1‑35 (MQ=255) cATAAGTAGTGGAGAAACCGAAACCGGTAATGACt < 1:6271606/35‑1 (MQ=255) cATAAGTAGTGGAGAAACCGAAACCGGTAATGACt > 1:6811689/1‑35 (MQ=255) aTAAGTAGTGGAGAAACCGAAACCGGTAATGACTc < 1:14064025/35‑1 (MQ=255) aTAAGTAGTGGAGAAACCGAAACCGGTAATGACTc > 1:17620337/1‑35 (MQ=255) tAAGTAGTGGAGAAACCGAAACCGGTAATGACTcc < 1:10228109/35‑1 (MQ=255) tAAGTAGTGGAGAAACCGAAACCGGTAATGACTcc < 1:14686834/35‑1 (MQ=255) tAAGTAGTGGAGAAACCGAAACCGGTAATGACTcc > 1:10363291/1‑35 (MQ=255) tAAGTAGTGGAGAAACCGAAACCGGTAATGACTcc < 1:16281010/35‑1 (MQ=255) tAAGTAGTGGAGAAACCGAAACCGGTAATGACTcc > 1:3625018/1‑35 (MQ=255) aaGTAGTGGAGAAACCGAAACCGGTAATGACTCCa > 1:5136745/1‑35 (MQ=255) aaGTAGTGGAGAAACCGAAACCGGTAATGACTCCa > 1:8132235/1‑35 (MQ=255) aaGTAGTGGAGAAACCGAAACCGGTAATGACTCCa > 1:16517130/1‑35 (MQ=255) agtagtGGAGAAACCGAAACCGGTAATGACTCCaa < 1:19622807/35‑1 (MQ=255) agtagtGGAGAAACCGAAACCGGTAATGACTCCaa < 1:16881078/35‑1 (MQ=255) gtaggGGAGAAACCGAAACCGGTAATGACTCCAAc < 1:976357/35‑1 (MQ=255) gtaggGGAGAAACCGAAACCGGTAATGACTCCAAc < 1:12994181/35‑1 (MQ=255) tagtGGAGAAACCGAAACCTGTAATGACTCCAACt > 1:8400473/1‑35 (MQ=255) tagtGGAGAAACCGAAACCGGTAATGACTCCAACt < 1:19952926/35‑1 (MQ=255) tagtGGAGAAACCGAAACCGGTAATGACTCCAACt > 1:20484429/1‑35 (MQ=255) tagtGGAGAAACCGAAACCGGTAATGACTCCAACt < 1:85633/35‑1 (MQ=255) tagtGGAGAAACCGAAACCGGTAATGACTCCAACt < 1:13439253/35‑1 (MQ=255) tagtGGAGAAACCGAAACCGGTAATGACTCCAACt < 1:10845955/35‑1 (MQ=255) tagtGGAGAAACCGAAACCGGTAATGACTCCAACt < 1:4302526/35‑1 (MQ=255) tagtGGAGAAACAGAAACCGGTAATGACTCCAACt < 1:2483252/35‑1 (MQ=255) agtGGAGAAACCGAAACCGGTAATGACTCCAACtt > 1:3528050/1‑35 (MQ=255) agtGGAGAAACCGAAACCGGTAATGACTCCAACtt < 1:10700606/35‑1 (MQ=255) agtGGAGAAACCGAAACCGGTAATGACTCCAACtt < 1:15216453/35‑1 (MQ=255) gtGGAGAAACCGAAACCGGTAATGACTCCAACTTa > 1:15411459/1‑35 (MQ=255) gtGGAGAAACCGAAACCGGTAATGACTCCAACTTa > 1:2154516/1‑35 (MQ=255) gtGGAGAAACCGAAACCGGTAATGACTCCAACTTa < 1:3867379/35‑1 (MQ=255) tGGAGAAACCGAAACCGGTAATGACTCCAACTTAt < 1:16061154/35‑1 (MQ=255) tGGAGAAACCGAAACCGGTAATGACTCCAACTTAt > 1:15319879/1‑35 (MQ=255) ggAGAAACCGAAACCGGTAATGACTCCAACTTAtt > 1:7106987/1‑35 (MQ=255) ggAGAAACCGAAACCGGTAATGACTCCAACTTAtt > 1:8837067/1‑35 (MQ=255) ggAGAAACCGAAACCGGTAATGACTCCAACTTAtt > 1:10167331/1‑35 (MQ=255) ggAGAAACCGAAACCGGTAATGACTCCAACTTAtt > 1:1160601/1‑35 (MQ=255) ggAGAAACCGAAACCGGTAATGACTCCAACTTAtt < 1:11608896/35‑1 (MQ=255) ggAGAAACCGAAACCGGTAATGACTCCAACTTAtt > 1:15952065/1‑35 (MQ=255) gagaAACCGAAACCGGTAATGACTCCAACTTATTg > 1:7308418/1‑35 (MQ=255) gagaAACCGAAACCGGTAATGACTCCAACTTATTg > 1:14368138/1‑35 (MQ=255) gagaAACCGAAACCGGTAATGACTCCAACTTATTg < 1:16229757/35‑1 (MQ=255) agaAACCGAAACCGGTAATGACTCCAACTTATTGa > 1:8403788/1‑35 (MQ=255) agaAACCGAAACCGGTAATGACTCCAACTTATTGa > 1:1186195/1‑35 (MQ=255) agaAACCGAAACCGGTAATGACTCCAACTTATTGa < 1:16903870/35‑1 (MQ=255) agaAACCGAAACCGGTAATGACTCCAACTTATTGa < 1:12777638/35‑1 (MQ=255) agaAACCGAAACCGGTAATGACTCCAACTTATTGa < 1:5536993/35‑1 (MQ=255) agaAACCGAAACCGGTAATGACTCCAACTTATTGa > 1:5866492/1‑35 (MQ=255) gaaaccgaaaccTGTAATGACTCCAACTTATTGAt > 1:16850372/1‑35 (MQ=255) aaaccgaaaccgGTAATGACTCCAACTTATTGATa > 1:18035627/1‑35 (MQ=255) aaaccgaaaccgGTAATGACTCCAACTTATTGATa > 1:7278149/1‑35 (MQ=255) aaaccgaaaccgGTAATGACTCCAACTTATTGATa > 1:7141568/1‑35 (MQ=255) aaaccgaaaccgGTAATGACTCCAACTTATTGATa < 1:5164714/35‑1 (MQ=255) aaccgaaaccgGTAATGACTCCAACTTATTGATAg > 1:13170113/1‑35 (MQ=255) aaccgaaaccgGTAATGACTCCAACTTATTGATAg > 1:19320979/1‑35 (MQ=255) aaccgaaaccgGTAATGACTCCAACTTATTGATAg < 1:15033653/35‑1 (MQ=255) accgaaaccgGTAATGACTCCAACTTATTGATAgt > 1:12144583/1‑35 (MQ=255) accgaaaccgGTAATGACTCCAACTTATTGATAgt > 1:19487813/1‑35 (MQ=255) ccgaaaccgGTAATGACTCCAACTTATTGATAgtg > 1:6203846/1‑35 (MQ=255) ccgaaaccgGTAATGACTCCAACTTATTGATAgtg < 1:2444030/35‑1 (MQ=255) cgaaaccgGTAATGACTCCAACTTATTGATAgtgt < 1:5972027/35‑1 (MQ=255) cgaaaccgGTAATGACTCCAACTTATTGATAgtgt > 1:17112911/1‑35 (MQ=255) cgaaaccgGTAATGACTCCAACTTATTGATAgcgt > 1:8796562/1‑35 (MQ=255) cgaaaccgGTAATGACTCCAAATTATTGATAgtgt < 1:10242962/35‑1 (MQ=255) gaaaccgGTAATGACTCCAACTTATTGATAGTGtt < 1:10175165/35‑1 (MQ=40) gaaaccgGTAATGACTCCAACTTATTGATAGTGtt < 1:2799318/35‑1 (MQ=40) gaaaccgGTAATGACTCCAACTTATTGATAGTGtt < 1:18946105/35‑1 (MQ=40) gaaaccgGTAATGACTCCAACTTATTGATAGTGtt < 1:8485148/35‑1 (MQ=40) aaaccgGTAATGACTCCAACTTATTGATAGTGttt < 1:19879364/35‑1 (MQ=38) aaaccgGTAATGACTCCAACTTATTGATAGTGttt < 1:5813792/35‑1 (MQ=38) aaccgGTAATGACTCCAACTTATTGATAGTGtttt < 1:19751573/35‑1 (MQ=35) accgGTAATGACTCCAACTTATTGATAGTGTTTTa > 1:12765254/1‑35 (MQ=32) accgGTAATGACTCCAACTTATTGATAGTGTTTTa < 1:13415412/35‑1 (MQ=32) accgGTAATGACTCCAACTTATTGATAGTGTTTTa > 1:18627561/1‑35 (MQ=32) accgGTAATGACTCCAACTTATTGATAGTGGTTTa > 1:11444538/1‑35 (MQ=12) | CTTCATACTCATAAGTAGTGGAGAAACCGAAACCGGTAATGACTCCAACTTATTGATAGTGTTTTA > REL606/546898‑546963 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |