New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 3676501106 (1.030)13 (0.130) 7/46 NT 12.1% coding (1242/1278 nt) yiaN predicted transporter
?REL606 = 3822225 91 (0.890)coding (203/1323 nt) glvG predicted 6‑phospho‑beta‑glucosidase

Only 100 of 170 total aligned reads displayed.

ATCAACGTCGCTGAACGCTACTTCAGGATCGGTGGTGTAACTAAACGCAATGTCCGGCGCTTTTTCTTT  >  REL606/3822191‑3822259
                                  |                                  
aTCAACGTCGCTGAACGCTACTTCAGGATCggtgg                                    >  1:17807117/1‑35 (MQ=255)
aTCAACGTCGCTGAACGCTACTTCAGGATCggtgg                                    <  1:5521639/35‑1 (MQ=255)
 tCAACGTCGCTGAACGCTACTTCAGGATCggtggt                                   <  1:17862706/35‑1 (MQ=255)
 tCAACGTCGCTGAACGCTACTTCAGGATCggtggt                                   <  1:12818589/35‑1 (MQ=255)
 tCAACGTCGCTGAACGCTACTTCAGGATCGGTGGg                                   <  1:8113231‑M2/35‑2 (MQ=255)
 tCAACGTCGCTGAACGCTACTTCAGGATCGGTGGg                                   <  1:5862645‑M2/35‑2 (MQ=255)
  cAACGTCGCTGAACGCTACTTCAGGATCGgtggtg                                  <  1:5758440/35‑1 (MQ=255)
  cAACGTCGCTGAACGCTACTTCAGGATCGGTGGgg                                  <  1:14979524‑M2/35‑3 (MQ=255)
   aaCGTCGCTGAACGCTACTTCAGGATCGGTGgtgt                                 <  1:8772072/35‑1 (MQ=255)
   aaCGTCGCTGAACGCTACTTCAGGATCGGTGgtgt                                 <  1:12310758/35‑1 (MQ=255)
   aaCGTCGCTGAACGCTACTTCAGGATCGGTGGggg                                 <  1:2135200‑M2/35‑4 (MQ=255)
   aaCGTCGCTGAACGCTACTTCAGGATCGGTGGggg                                 <  1:6362945‑M2/35‑4 (MQ=255)
   aaCGTCGCTGAACGCTACTTCAGGATCGGTGGggg                                 <  1:13042206‑M2/35‑4 (MQ=255)
    aCGTCGCTGAACGCTACTTCAGGATCGGTGGgggg                                <  1:1986901‑M2/35‑5 (MQ=255)
    aCGTCGCTGAACGCTACTTCAGGATCGGTGGgggg                                <  1:13357283‑M2/35‑5 (MQ=255)
    aCGTCGCTGAACGCTACTTCAGGATCGGTGGgggg                                <  1:9421718‑M2/35‑5 (MQ=255)
    aCGTCGCTGAACGCTACTTCAGGATCGGTGGTGTa                                <  1:5646565/35‑1 (MQ=255)
    aCGTCGCTGAACGCTACTTCAGGATCGGTGGTGTa                                <  1:10044257/35‑1 (MQ=255)
     cGTCGCTGAACGCTACTTCAGGATCGGTGGggggg                               <  1:4474945‑M2/35‑6 (MQ=255)
     cGTCGCTGAACGCTACTTCAGGATCGGTGGggggg                               <  1:8193897‑M2/35‑6 (MQ=255)
     cGTCGCTGAACGCTACTTCAGGATCGGTGGTGTaa                               <  1:4597704/35‑1 (MQ=255)
      gTCGCTGAACGCTACTTCAGGATCGTTGGTGTAAc                              >  1:14412119/1‑35 (MQ=255)
      gTCGCTGAACGCTACTTCAGGATCGGTGGTGTAAc                              <  1:17207869/35‑1 (MQ=255)
       tCGCTGAACGCTACTTCAGGATCGGTGGggggagt                             <  1:19719489‑M2/35‑8 (MQ=255)
       tCGCTGAACGCTACTTCAGGATCGGTGGggggaat                             <  1:2129155‑M2/35‑8 (MQ=255)
       tCGCTGAACGCTACTTCAGGATCGGTGGTGTAACt                             <  1:17880920/35‑1 (MQ=255)
       tCGCTGAACGCTACTTCAGGATCGGTGGTGTAACt                             <  1:860636/35‑1 (MQ=255)
        cGCTGAACGCTACTTCAGGATCGGTGGTGTAACTa                            <  1:18537949/35‑1 (MQ=255)
        cGCTGAACGCTACTTCAGGATCGGTGGTGTAACTa                            <  1:6750333/35‑1 (MQ=255)
        cGCTGAACGCTACTTCAGGATCGGTGGTGTAACTa                            <  1:17453770/35‑1 (MQ=255)
        cGCCGAACGCTACTTCAGGATCGGTGGTGTAACTa                            <  1:100576/35‑1 (MQ=255)
         gCTGAACGCTACTTCAGGATCTGTGGTGTAACTaa                           >  1:236462/1‑35 (MQ=255)
         gCTGAACGCTACTTCAGGATCGGTGGTGTAACTaa                           <  1:8076368/35‑1 (MQ=255)
         gCTGAACGCTACTTCAGGATCGGTGGTGTAACTaa                           <  1:8057868/35‑1 (MQ=255)
          cTGAACGCTACTTCAGGATCGGTGGggggaataaa                          <  1:1075665‑M2/35‑11 (MQ=255)
          cTGAACGCTACTTCAGGATCGGTGGggggaataaa                          <  1:1998616‑M2/35‑11 (MQ=255)
          cTGAACGCTACTTCAGGATCGGTGGTGTAACTaaa                          <  1:3001659/35‑1 (MQ=255)
          cTGAACGCTACTTCAGGATCGGTGGTGTAACTaaa                          <  1:13482175/35‑1 (MQ=255)
          cTGAACGCTACTTCAGGATCGGTGGTGTAACTaaa                          <  1:11998518/35‑1 (MQ=255)
          cTGAACGCTACTTCAGGATCGGTGGTGTAACTaaa                          <  1:9603034/35‑1 (MQ=255)
           tGAACGCTACTTCAGGATCGGTGGggggaataaaa                         <  1:7835771‑M2/35‑12 (MQ=255)
           tGAACGCTACTTCAGGATCGGTGGTGTAACTAAAc                         <  1:14706741/35‑1 (MQ=255)
           tGAACGCTACTTCAGGATCGGTGGTGTAACTAAAc                         <  1:11452854/35‑1 (MQ=255)
              aCGCTACTTCAGGATCGGTGGggggactaaaaaca                      <  1:19036717‑M2/35‑15 (MQ=255)
              aCGCTACTTCAGGATCGGTGGggggaataaaaaca                      <  1:4635597‑M2/35‑15 (MQ=255)
              aCGCTACTTCAGGATCGGTGGggggaataaaaaca                      <  1:3339658‑M2/35‑15 (MQ=255)
              aCGCTACTTCAGGATCGGTGGTGTAACTAAACGCa                      <  1:19289153/35‑1 (MQ=255)
              aCGCTACTTCAGGATCGGTGGTGTAACTAAACGCa                      <  1:2827755/35‑1 (MQ=255)
              aCGCTACTTCAGGATCGGTGGTGTAACTAAACGCa                      <  1:18728687/35‑1 (MQ=255)
              aCGCTACTTCAGGATCGGTGGTGTAACTAAACGCa                      <  1:8149163/35‑1 (MQ=255)
               cGCTACTTCAGGATCGGTGGggggaataaaaacaa                     <  1:20530198‑M2/35‑16 (MQ=255)
               cGCTACTTCAGGATCGGTGGTGTAACTAAACGCaa                     <  1:2931542/35‑1 (MQ=255)
               cGCTACTTCAGGATCGGTGGTGTAACTAAACGCaa                     <  1:6967866/35‑1 (MQ=255)
               cGCTACTTCAGGATCGGTGGTGTAACTAAACGCaa                     <  1:3398780/35‑1 (MQ=255)
               cGCTACTTCAGGATCGGTGGTGTAACTAAACGCaa                     <  1:2479176/35‑1 (MQ=255)
               cGCTACTTCAGGATCGGTGGTGTAACTAAACGCaa                     <  1:4046842/35‑1 (MQ=255)
               cGCTACTTCAGGATCGGTGGTGTAACTAAACGCaa                     <  1:10479870/35‑1 (MQ=255)
                gCTACTTCAGGATCGGTGGggggaataaaaacaaa                    <  1:6595206‑M2/35‑17 (MQ=255)
                gCTACTTCAGGATCGGTGGTGTAACTAAACGCAAt                    <  1:125276/35‑1 (MQ=255)
                gCTACTTCAGGATCGGTGGTGTAACTAAACGCAAt                    <  1:6764748/35‑1 (MQ=255)
                gCTACTTCAGGATCGGTGGTGTAACTAAACGCAAt                    <  1:6227521/35‑1 (MQ=255)
                gCTACTTCAGGATCGGTGGTGTAACTAAACGCAAt                    <  1:9849494/35‑1 (MQ=255)
                gCTACTTCAGGATCGGTGGTGTAACTAAACGCAAt                    <  1:18333652/35‑1 (MQ=255)
                 cTACTTCAGGATCGGTGGTGTAACTAAACGCAATg                   <  1:6484620/35‑1 (MQ=255)
                 cTACTTCAGGATCGGTGGTGTAACTAAACGCAATg                   <  1:4558843/35‑1 (MQ=255)
                   aCTTCAGGATCGGTGGTGTAACTAAACGCAATGTc                 <  1:7602384/35‑1 (MQ=255)
                   aCTTCAGGATCGGTGGTGTAACTAAACGCAATGTc                 <  1:19277733/35‑1 (MQ=255)
                    cTTCAGGATCGGTGGTGTAACTAAACGCAATGTcc                <  1:16448553/35‑1 (MQ=255)
                    cTTCAGGATCGGTGGTGTAACTAAACGCAATGTcc                <  1:16775072/35‑1 (MQ=255)
                    cTTCAGGATCGGTGGTGTAACTAAACGCAATGTcc                <  1:5118369/35‑1 (MQ=255)
                    cTTCAGGATCGGTGGTGTAACTAAACGCAATGTcc                <  1:3095232/35‑1 (MQ=255)
                    cTTCAGGATCGGTGGTGTAACTAAACGCAATGTcc                <  1:3175797/35‑1 (MQ=255)
                     ttCAGGATCGGTGGTGTAACTAAACGCAATGTCCg               <  1:10308180/35‑1 (MQ=255)
                     ttCAGGATCGGTGGTGTAACTAAACGCAATGTCCg               <  1:16616309/35‑1 (MQ=255)
                     ttCAGGATCGGTGGTGTAACTAAACGCAATGTCCg               <  1:6030152/35‑1 (MQ=255)
                      tCAGGATCGGTGGTGTAACTAAACGCAATGTCCgg              <  1:17927903/35‑1 (MQ=255)
                       cAGTATCGGTGGTGTAACTAAACGCAATGTCCGgc             <  1:1192582/35‑1 (MQ=255)
                       cAGGATCGGTGGTGTAACTAAACGCAATGTCCGgc             <  1:16754424/35‑1 (MQ=255)
                       cAGGATCGGTGGTGTAACTAAACGCAATGTCCGgc             <  1:12037421/35‑1 (MQ=255)
                       cAGGATCGGTGGTGTAACTAAACGCAATGTCCGgc             <  1:6557935/35‑1 (MQ=255)
                          gATCGGTGGTGTAACTAAACGCAATGTCCGGCGCt          <  1:16085217/35‑1 (MQ=255)
                           aTCGGTGGTGTAACTAAACGCAATGTCCGGCGCtt         <  1:6645837/35‑1 (MQ=255)
                           aTCGGTGGTGTAACTAAACGCAATGTCCGGCGCtt         <  1:1704964/35‑1 (MQ=255)
                           aTCGGTGGTGTAACTAAACGCAATGTCCGGCGCtt         <  1:1530307/35‑1 (MQ=255)
                            tCGGTGGTGTAACTAAACGCAATGTCCGGCGCttt        <  1:535068/35‑1 (MQ=255)
                             cGGTGGTGTAACTAAACGCAATGTCCGGCGCtttt       <  1:9332842/35‑1 (MQ=255)
                             cGGTGGTGTAACTAAACGCAATGTCCGGCGCtttt       <  1:8671458/35‑1 (MQ=255)
                              ggtggtGTAACTAAACGCAATGTCCGGCGCttttt      >  1:16395597/1‑35 (MQ=255)
                              ggtggtGTAACTAAACGCAATGTCCGGCGCttttt      >  1:13779689/1‑35 (MQ=255)
                              ggtggtGTAACTAAACGCAATGTCCGGCGCttttt      <  1:3995649/35‑1 (MQ=255)
                              ggtggtGTAACTAAACGCAATGTCCGGCGCttttt      <  1:11097315/35‑1 (MQ=255)
                              ggtggtGTAACTAAACGCAATGTCCGGCGCttttt      >  1:10873565/1‑35 (MQ=255)
                              ggtgggGTAACTAAACGCAATGTCCGGCGCttttt      >  1:15003872/1‑35 (MQ=255)
                               gtggtgTAACTAAACGCAATGTCCGGCGCTTTTTc     >  1:5119541/1‑35 (MQ=255)
                               gtggtgTAACTAAACGCAATGTCCGGCGCTTTTTc     <  1:16669638/35‑1 (MQ=255)
                                tggtgTAACTAAACGCAATGTCCGGCGCTTTTTCt    <  1:19845424/35‑1 (MQ=255)
                                tggtgTAACTAAACGCAATGTCCGGCGCTTTTTCt    <  1:15469243/35‑1 (MQ=255)
                                tggtgTAACTAAACGCAATGTCCGGCGCTTTTTCt    <  1:3638177/35‑1 (MQ=255)
                                 ggtgTAACTAAACGCAATGTCCGGCGCTTTTTCtt   <  1:2644239/35‑1 (MQ=255)
                                 ggtgTAACTAAACGCAATGTCCGGCGCTTTTTCtt   <  1:15581844/35‑1 (MQ=255)
                                  |                                  
ATCAACGTCGCTGAACGCTACTTCAGGATCGGTGGTGTAACTAAACGCAATGTCCGGCGCTTTTTCTTT  >  REL606/3822191‑3822259

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.