New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 615035 | 53 (0.520) | 4 (0.050) | 3/38 | NT | 7.4% | coding (157/198 nt) | ybdD | hypothetical protein |
? | REL606 | = 3625455 | 58 (0.710) | pseudogene (8/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
Only 100 of 121 total aligned reads displayed.
GATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTG > REL606/615001‑615069 | gATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGG > 1:5756860‑M1/1‑35 (MQ=255) gATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGG < 1:1941949‑M1/35‑1 (MQ=255) gATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGG < 1:6590694‑M1/35‑1 (MQ=255) aTGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGg > 1:12809703‑M1/1‑34 (MQ=255) aTGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGg > 1:10182038‑M1/1‑34 (MQ=255) aTGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGg > 1:2161037‑M1/1‑34 (MQ=255) aTGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGa < 1:9046361/35‑1 (MQ=255) tGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGgg > 1:16848837‑M1/1‑33 (MQ=255) tGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGgg > 1:13629208‑M1/1‑33 (MQ=255) tGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGAc < 1:12142073/35‑1 (MQ=255) tGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGAc < 1:2317855/35‑1 (MQ=255) gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGggg > 1:15546750‑M1/1‑32 (MQ=255) gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGggg > 1:8186072‑M1/1‑32 (MQ=255) gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGggg > 1:3838761‑M1/1‑32 (MQ=255) gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGgcg > 1:19988520‑M1/1‑32 (MQ=255) gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGagg > 1:13261229/1‑33 (MQ=255) gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGAcg < 1:9502686/35‑1 (MQ=255) tccTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgc < 1:1220764/34‑1 (MQ=255) aCCTACGAAGAGTTTTTCCGTGAGCGGCNGGAcgn > 1:3119541/1‑35 (MQ=255) aCCTACGAAGAGTTTTTCCGTGAGCGGCAGGgggg > 1:2966051‑M1/1‑31 (MQ=255) aCCTACGAAGAGTTTTTCCGTGAGCGGCAGGgggg > 1:8050182‑M1/1‑31 (MQ=255) aCCTACGAAGAGTTTTTCCGTGAGCGGCAGGgggg > 1:12412810‑M1/1‑31 (MQ=255) aCCTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgc < 1:10328246/35‑1 (MQ=255) aCCTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgc < 1:17625121/35‑1 (MQ=255) aCCTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgc < 1:17459552/35‑1 (MQ=255) ccTACGAAGAGTTTTTCCGTGAGCGGCAGGggggg > 1:12728805‑M1/1‑30 (MQ=255) ccTACGAAGAGTTTTTCCGTGAGCGGCAGGggggg > 1:7116218‑M1/1‑30 (MQ=255) ccTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcg < 1:18330848/35‑1 (MQ=255) ccTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcg < 1:3754744/35‑1 (MQ=255) cTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcgc < 1:20208349/35‑1 (MQ=255) cTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcgc < 1:5880555/35‑1 (MQ=255) cTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcgc < 1:18858179/35‑1 (MQ=255) tACGAAGAGTTTTTCCGTGAGCGGCAGGggggggg > 1:10534309‑M1/1‑28 (MQ=255) tACGAAGAGTTTTTCCGTGAGCGGCAGGgggggcg > 1:13561984‑M1/1‑28 (MQ=255) tACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcgcg < 1:8992833/35‑1 (MQ=255) tACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcgcg < 1:17572990/35‑1 (MQ=255) aCGAAGAGTTTTTCCGTGAGCGGCAGGACgctcgc > 1:7220507/1‑35 (MQ=255) cGAAGAGTTTTTCCGTGAGCGGCAGGgggggcggg > 1:6788090‑M1/1‑26 (MQ=255) cGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCt < 1:14137010/35‑1 (MQ=255) cGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCt < 1:10027617/35‑1 (MQ=255) gAAGAGTTTTTCCGTGAGCGGCAGGgggggcgggg > 1:1813478‑M1/1‑25 (MQ=255) gAAGAGTTTTTCCGTGAGCGGCAGGgggggcgcgg > 1:2797304‑M1/1‑25 (MQ=255) gAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTa < 1:18575610/35‑1 (MQ=255) gAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTa < 1:17464111/35‑1 (MQ=255) gAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTa < 1:16723810/35‑1 (MQ=255) gAAGAGTTTTTCAGTGAGAGGCAGGACGCGCGCTa < 1:2789332/35‑1 (MQ=37) aaGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTAc < 1:18920140/35‑1 (MQ=255) aaGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTAc < 1:5772329/35‑1 (MQ=255) gagTTTTTCCGTGAGCGGCAGGACGCGCGCTACgg < 1:10642443/35‑1 (MQ=255) gagTTTTTCCGTGAGCGGCAGGACGCGCGCTACgg < 1:4226032/35‑1 (MQ=255) agTTTTTCCGTGAGCGGCAGGGCGCGGGCTACGGt > 1:7897522/1‑35 (MQ=37) agTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGt < 1:1888216/35‑1 (MQ=255) tttttCCGTGAGCGGCAGGACGCGCGCTACGGTgg < 1:19195454/35‑1 (MQ=255) tttttCCGTGAGCGGCAGGACGCGCGCTACGGTgg < 1:12126745/35‑1 (MQ=255) ttttCCGTGAGCGGCAGGACGCGCGCTACGGTGGa < 1:10140484/35‑1 (MQ=255) ttttCCGTGAGCGGCAGGACGCGCGCTACGGTGGa < 1:2062459/35‑1 (MQ=255) ttCCGTGAGCGGCAGGACGCGCGCTACGGTGGaaa < 1:5806788/35‑1 (MQ=255) ttCCGTGAGCGGCAGGACGCGCGCTACGGTGGaaa < 1:1544544/35‑1 (MQ=255) tCCGTGAGCGGCAGGACGCGCGCTACGGTGGaaaa < 1:5009467/35‑1 (MQ=255) ccGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAg < 1:15104493/35‑1 (MQ=255) gTGAGCGGCAGGACGCGCGCTACGGTGGAAAAggc < 1:4265748/35‑1 (MQ=255) tGAGCGGCAGGACGCGCGCTACGGTGGAAAAggcg < 1:5522080/35‑1 (MQ=255) tGAGCGGCAGGACGCGCGCTACGGTGGAAAAggcg < 1:746993/35‑1 (MQ=255) tGAGCGGCAGGACGCGCGCTACGGTGGAAAAggcg < 1:12517210/35‑1 (MQ=255) tGAGCGGCAGGACGCGCGCTACGGTGGAAAAggcg < 1:9640457/35‑1 (MQ=255) gtaGCGGCAGGACGCGCGCTACGGTGGAAAAggcg < 1:1354481/33‑1 (MQ=255) aGCGGCAGGACGCGCGCTACGGTGGAAAAggcggc < 1:9742102/35‑1 (MQ=255) aGCGGCAGGACGCGCGCTACGGTGGAAAAggcggc < 1:10007827/35‑1 (MQ=255) aGCGGCAGGACGCGCGCTACGGTGGAAAAggcggc < 1:11203555/35‑1 (MQ=255) aGCGGCAGGACGCGCGCTACGGTGGAAAAggcggc < 1:15460174/35‑1 (MQ=255) aGCGGCAGGACGCGCGCTACGGTGGAAAAggcggc < 1:20191619/35‑1 (MQ=255) gCGGCAGGACGCGCGCTACGGTGGAAAAGgcggcg < 1:8877736/35‑1 (MQ=255) cGGCAGGACGCGCGCTACGGTGGAAAAGGCGgcgc < 1:11309673/35‑1 (MQ=255) cGGCAGGACGCGCGCTACGGTGGAAAAGGCGgcgc < 1:12597694/35‑1 (MQ=255) cGGCAGGACGCGCGCTACGGTGGAAAAGGCGgcgc < 1:6518515/35‑1 (MQ=255) cGGCAGGACGCGCGCTACGGTGGAAAAGGCGgcgc < 1:13226663/35‑1 (MQ=255) cGGCAGGACGCGCGCTACGGTGGAAAAGGCGgcgc < 1:768689/35‑1 (MQ=255) ggCAGGACGCGCGCTACGGTGGAAAAGGCGgcgcg < 1:15047352/35‑1 (MQ=255) gCAGGACGCGCGCTACGGTGGAAAAGGCTgcgcgc > 1:20492059/1‑35 (MQ=255) gCAGGACGCGCGCTACGGTGGAAAAGGCGgcgcgc < 1:5232162/35‑1 (MQ=255) cAGGACGCGCGCTACGGTGGAAAAGGCGgcgcggg > 1:9135018/1‑33 (MQ=255) cAGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcg > 1:1231273/1‑35 (MQ=255) cAGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcg > 1:9202142/1‑35 (MQ=255) aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc > 1:12239119/1‑35 (MQ=255) aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc > 1:15124544/1‑35 (MQ=255) aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc > 1:7185629/1‑35 (MQ=255) aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc < 1:6746850/35‑1 (MQ=255) aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc < 1:6158996/35‑1 (MQ=255) aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc < 1:6089171/35‑1 (MQ=255) aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc > 1:4805971/1‑35 (MQ=255) ggACGCGCGCTACGGTGGAAAAGGCGGCGCGCgct < 1:17324661/35‑1 (MQ=255) ggACGCGCGCTACGGTGGAAAAGGCGGCGCGCgct > 1:562532/1‑35 (MQ=255) ggACGCGCGCTACGGTGGAAAAGGCGGCGCGCgct < 1:10814301/35‑1 (MQ=255) ggACGCGCGCTACGGTGG‑AAAGGCGGCGCGCgctg < 1:1951431/35‑1 (MQ=38) gACGCGCGCTACGGTGGAAAAGGCGgctcccgccc > 1:15334308/1‑33 (MQ=37) gACGCGCGCTACGGTGGAAAAGGCGgcgcgcgcgg > 1:2071062/1‑33 (MQ=255) gACGCGCGCTACGGTGGAAAAGGCGGCGCGCgctg < 1:16122736/35‑1 (MQ=255) gACGCGCGCTACGGTGGAAAAGGCGGCGCGCgctg > 1:3519439/1‑35 (MQ=255) gACGCGCGCTACGGTGGAAAAGGCGGCGCGCgctg < 1:4957657/35‑1 (MQ=255) gACGCGCGCTACGGTGGAAAAGGCGGCGCGCgctg > 1:9513910/1‑35 (MQ=255) | GATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTG > REL606/615001‑615069 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |