Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 2,122,426 | IS150 (–) +3 bp | 46.2% | coding (198‑200/216 nt) | ECB_02013 ← | conserved hypothetical protein; putative exported protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2122426 = | 47 (0.520) | 48 (0.470) | 32/48 | NT | 47.2% | coding (200/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein |
? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 2122428 | 46 (0.540) | 32 (0.320) | 21/46 | NT | 37.7% | coding (198/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein |
? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 234 total aligned reads displayed.
TTGTACCGTTGAAAGCCCCTACTGGTGACACCCTAAATATCCCTTACACGGGCTTATTTTTTTATGCAT > REL606/2122392‑2122460 | ttGTACCGTTGAAAGCCCCTACTGTTGACACCCTa > 1:2606255/1‑35 (MQ=255) ttGTACCGTTGAAAGCCCCTACTGGTGACACCCTa < 1:13194976/35‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcggtacaa > 1:12573756‑M1/35‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa > 1:16159723‑M1/35‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa > 1:18488119‑M1/35‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa < 1:2430416‑M1/1‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa < 1:12863753‑M1/1‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa > 1:12499555‑M1/35‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa > 1:5362827‑M1/35‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa > 1:6329413‑M1/35‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa > 1:8577451‑M1/35‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa < 1:8847715‑M1/1‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa > 1:8987886‑M1/35‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa < 1:9081863‑M1/1‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa > 1:9554216‑M1/35‑35 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaa < 1:10034006‑M1/1‑1 (MQ=255) tGTCCCGTTGAAAGCCCCTACTGGTGACACCCTaa < 1:11865867/35‑1 (MQ=255) tGTACCGTTGAAAGCCCCTACTGGTGACACCCTaa > 1:17436085/1‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaaa > 1:5853634‑M1/34‑35 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaaa < 1:11499761‑M1/2‑1 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaaa < 1:18702934‑M1/2‑1 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaaa < 1:18255585‑M1/2‑1 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaaa < 1:16623817‑M1/2‑1 (MQ=255) gtcccGTTGAAAGCCCCTACTGGTGACACCCTaaa < 1:9832030/32‑1 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaaaa < 1:2540407‑M1/3‑1 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaaaa < 1:8538996‑M1/3‑1 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaaaa < 1:8175373‑M1/3‑1 (MQ=255) atACAGTTGAAAGCCCCTACTGGTGACGCCCTaaa < 1:4401612/34‑1 (MQ=37) tttcatcgtccaacaaaatgggtgcagtacaagtg < 1:11956294‑M1/4‑4 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaagtg < 1:20444139‑M1/4‑4 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaAAat > 1:184065‑M1/32‑35 (MQ=255) tcccgtTGAAAGCCCCTACTGGTGACACCCTAAAt < 1:19995641‑M1/33‑2 (MQ=255) tACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt > 1:7500808‑M1/1‑34 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaAAatat > 1:8071808‑M1/30‑35 (MQ=255) catcgtccaacaaaatgggtgcagtacaAAATATc < 1:10396351‑M1/7‑1 (MQ=255) gTTGAAAGCCCCTACTGGTGACACCATAAAtgtac < 1:18277533‑M1/35‑6 (MQ=255) ttGAAAGCCCCTACTGGTGACACCCTAAATATccc > 1:13324567/1‑35 (MQ=255) tcgtccaacaaaatgggtgcagtacaAAATATccc > 1:3099599‑M1/27‑35 (MQ=255) cgtccaacaaaatgggtgcagtacaAAATATCCCt > 1:4595473‑M1/26‑35 (MQ=255) cgtccaaaaaaatgggtgcagtacaAAATATCCCt > 1:18353084‑M1/26‑35 (MQ=255) gtccaacaaaatgggtgcagtacaAAATATCCCtt > 1:3620244‑M1/25‑35 (MQ=255) tccaacaaaatgggtgcagtacaAAATATCCCTTa < 1:11343143‑M1/12‑1 (MQ=255) aaGCCCCTACTGGTGACACCCTAAATATCCCTTac < 1:2324629/35‑1 (MQ=255) caacaaaatgggtgcagtacaAAATATCCCTTaca > 1:5645837‑M1/22‑35 (MQ=255) aGCCCCTACTGGTGACACCCTAAAtgtactgaccc < 1:19221172‑M1/35‑12 (MQ=255) aGCCCCTACTGGTGACACCCTAAATATCCCTTaca < 1:15362943/35‑1 (MQ=255) aGCCCCTACTGGTGACACCCTAAATATCCCTTaca < 1:15016791/35‑1 (MQ=255) aGCCCCTACTGGTGACACCCTAAATATCCCTTaca < 1:2526921/35‑1 (MQ=255) gCCCCTACTGGTGACACCCTAAATATCCCTTacac < 1:14401906/35‑1 (MQ=255) aacaaaatgggtgcagtacaAAATATCCCTTacac > 1:13903239‑M1/21‑35 (MQ=255) ccccTACTGGTGACACCCTAAATATCCCTTACACg < 1:18214813/35‑1 (MQ=255) acaaaatgggtgcagtacaAAATATCCCTTACACg < 1:6613535‑M1/16‑1 (MQ=255) acaaaatgggtgcagtacaAAATATCCCTTACACg < 1:5231344‑M1/16‑1 (MQ=255) acaaaatgggtgcagtacaAAATATCCCTTACACg > 1:5387713‑M1/20‑35 (MQ=255) caaaatgggtgcagtacaAAATATCCCTTACACgg > 1:20556830‑M1/19‑35 (MQ=255) ccTACTGGTGACACCCTAAAtgtactgaccccaaa < 1:4694058‑M1/35‑16 (MQ=255) ccTACTGGTGACACCCTAAAtgtactgaccccaaa < 1:19378091‑M1/35‑16 (MQ=255) ccTACTGGTGACACCCTAAATATCCCTTACACggg > 1:15803092/1‑35 (MQ=255) aaaatgggtgcagtacaAAATATCCCTTACACggg < 1:5485625‑M1/18‑1 (MQ=255) aaaatgggtgcagtacaAAATATCCCTTACACggg > 1:6991668‑M1/18‑35 (MQ=255) cTACTGGTGACACCCTAAAtgtactgaccctaaaa > 1:15794769‑M1/1‑19 (MQ=255) cTACTGGTGACACCCTAAATATCCCTTACACGGGc < 1:19645282/35‑1 (MQ=255) tACTGGTGACACCCTAAATATCCCTTACACGGGCt < 1:771243/35‑1 (MQ=255) tACTGGTGACACCCTAAATATCCCTTACACGGGCt > 1:16481260/1‑35 (MQ=255) atgggtgcagtacaAAATATCCCTTACACGGGCtt > 1:8665799‑M1/15‑35 (MQ=255) atgggtgcagtacaAAATATCCCTTACACGGGCtt < 1:3301895‑M1/21‑1 (MQ=255) tgggtgcagtacaAAATATCCCTTACACGGGCTTa > 1:20238126‑M1/14‑35 (MQ=255) cTGGTGACACCCTAAAtgtactgaccccaaaaagt > 1:11143083‑M1/1‑16 (MQ=255) cTGGTGACACCCTAAATATCCCTTACACGGGCTTa > 1:16887828/1‑35 (MQ=255) cTGGTGACACCCTAAATATCCCTTACACGGGCTTa > 1:9817432/1‑35 (MQ=255) tGGTGACACCCTAAAtgtactgaccccaaaaagtt > 1:17765434‑M1/1‑15 (MQ=255) tGGTGACACCCTAAATATCCCTTACACGGGCTTAt > 1:8397892/1‑35 (MQ=255) gggtgcagtacaAAATATCCCTTACACGGGCTTAt < 1:9238744‑M1/23‑1 (MQ=255) ggTGACACCCTAAATATCCCTTACACGGGCTTAtt < 1:7221391/35‑1 (MQ=255) gtgcagtacaAAATATCCCTTACACGGGCTTAttt < 1:3732648‑M1/25‑1 (MQ=255) gtgcagtacaAAATATCCCTTACACGGGCTTAttt > 1:131535‑M1/11‑35 (MQ=255) gTGACACCCTAAATATCCCTTACACGGTCTTAttt > 1:15582730/1‑35 (MQ=255) gTGACACCCTAAATATCCCTTACACGGGCTTAttt < 1:18575590/35‑1 (MQ=255) gTGACACCCTAAATATCCCTTACACGGGCTTAttt < 1:11007340/35‑1 (MQ=255) tgcagtacaAAATATCCCTTACACGGGCTTAtttt > 1:12128975‑M1/10‑35 (MQ=255) tgcagtacaAAATATCCCTTACACGGGCTTAtttt < 1:15873634‑M1/26‑1 (MQ=255) tGACACCCTAAAtgtactgaccccaaaaagttgga > 1:8710390‑M1/1‑12 (MQ=255) gcagtacaAAATATCCCTTACACGGGCTTAttttt > 1:10121850‑M1/9‑35 (MQ=255) gACACCCTAAAtgtactgaccccaaaaagttggac > 1:10864864‑M1/1‑11 (MQ=255) acacCCTAAATATCCCTTACACGGGCTTAtttttt < 1:6137358/35‑1 (MQ=255) acacCCTAAATATCCCTTACACGGGCTTAtttttt > 1:20598909/1‑35 (MQ=255) cacCCTAAAtgtactgaccccaaaaagttggacag < 1:14295870‑M1/35‑27 (MQ=255) cacCCTAAAtgtactgaccccaaaaagttggacag < 1:16988363‑M1/35‑27 (MQ=255) cacCCTAAATATCCCTTACACGGGCTTAttttttt > 1:9455197/1‑35 (MQ=255) agtacaAAATATCCCTTACACGGGCTTAttttttt < 1:3841350‑M1/29‑1 (MQ=255) gtacaAAATATCCCTTACACGGGCTTATTTTTTTa < 1:12191812‑M1/30‑1 (MQ=255) gtacaAAATATCCCTTACACGGGCTTATTTTTTTa < 1:19782025‑M1/30‑1 (MQ=255) acCCTAAATATCCCTTACACGGGCTTATTTTTTTa < 1:15669005/35‑1 (MQ=255) ccTAAAtgtactgaccccaaaaagttggacagtta > 1:6963453‑M1/1‑6 (MQ=255) ccTAAATATCCCTTACACGGGCTTATTTTTTTATg > 1:13450414/1‑35 (MQ=255) cTAAAtgtactgaccccaaaaagttggacagttaa < 1:3135134‑M1/35‑31 (MQ=255) aAAATATCCCTTACACGGGCTTATTTTTTTATGCa > 1:17146471‑M1/2‑35 (MQ=255) aaaTATCCCTTACACGGGCTTATTTTTTTATGCAt < 1:15237132/35‑1 (MQ=255) aaaTATCCCTTACACGGGCTTATTTTTTTATGCAt < 1:18909100/35‑1 (MQ=255) aaaTATCCCTTACACGGGCTTATTTTTTTATGCAt > 1:11774335/1‑35 (MQ=255) | TTGTACCGTTGAAAGCCCCTACTGGTGACACCCTAAATATCCCTTACACGGGCTTATTTTTTTATGCAT > REL606/2122392‑2122460 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |