New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2454481 | 67 (0.650) | 14 (0.140) | 6/46 | NT | 15.1% | coding (158/342 nt) | ECB_02307 | conserved hypothetical protein |
? | REL606 | = 4471806 | 97 (0.940) | coding (1485/1503 nt) | yjgR | predicted ATPase |
Only 100 of 167 total aligned reads displayed.
ACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGAT > REL606/4471772‑4471840 | aCAAATCTCGCCTGACTTACCTTCTTCTccccccc > 1:8366467/1‑35 (MQ=255) aCAAATCTCGCCTGACTTACCTTCTTCTccccccc < 1:6105111/35‑1 (MQ=255) aCAAATCTCGCCTGACTTACCTTCTTCTccccccc < 1:16338688/35‑1 (MQ=255) aCAAATCTCGCCTGACTTACCTTCTTCTccccccc < 1:19410962/35‑1 (MQ=255) aaaTCTCGCCTGACTTACCTTTTTCTCCCCCCCAg > 1:1843865/1‑35 (MQ=255) aaaTCTCGCCTGACTTACCTTCTTCTCCCCCCCAg > 1:10918446/1‑35 (MQ=255) aaaTCTCGCCTGACTTACCTTCTTCTCCCCCCCAg < 1:12018360/35‑1 (MQ=255) tctcGCCTGACTTACCTTCTTCTCCCCCCCAGCaa > 1:6333679/1‑35 (MQ=255) tctcGCCTGACTTACCTTCTTCTCCCCCCCAGCaa > 1:4466649/1‑35 (MQ=255) tctcGCCTGACTTACCTTCTTCTCCCCCCCAGCaa < 1:4158216/35‑1 (MQ=255) tctcGCCTGACTTACCTTCTTCTCCCCCCCAGCaa > 1:11932012/1‑35 (MQ=255) ctcGCCTGACTTACCTTCTTCTCCCCCCCAGCaaa < 1:16704539/35‑1 (MQ=255) ctcGCCTGACTTACCTTCTTCTCCCCCCCAGCaaa > 1:12681028/1‑35 (MQ=255) tcGCCTGACTTACCTTCTTCTCCCCCCCAGCAAAc < 1:5931830/35‑1 (MQ=255) tcGCCTGACTTACCTTCTTCTCCCCCCCAGCAAAc < 1:5233587/35‑1 (MQ=255) tcGCCTGACTTACCTTCTTCTCCCCCCCAGCAAAc > 1:13244473/1‑35 (MQ=255) cGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACt < 1:3697944/35‑1 (MQ=255) cGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACt < 1:9604116/35‑1 (MQ=255) cGCCTGACTTACCTTCTTCTCCCCACCAGCAAACt < 1:12372514/35‑1 (MQ=255) cGCCTGACTTACCTTCTTCTCCCCACCAGCAAACt < 1:12881776/35‑1 (MQ=255) cGCCTGACTTACCTTCTTATCCCCCCCAGCAAACt < 1:1912474/35‑1 (MQ=255) gCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTc < 1:16103404/35‑1 (MQ=255) gCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTc > 1:17313004/1‑35 (MQ=255) gCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTc > 1:20009798/1‑35 (MQ=255) gCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTc < 1:3850108/35‑1 (MQ=255) cTGACTTACCTTCTTCTCCCCCCCAGCAAACTccc < 1:14672012/35‑1 (MQ=255) cTGACTTACCTTCTTCTCCCCCCCAGCAAACTccc > 1:1013532/1‑35 (MQ=255) tGACTTACCTTCTTCTCCCCCCCAGCAAACTcccc > 1:11582667/1‑35 (MQ=255) tGACTTACCTTCTTCTCCCCCCCAGCAAACTcccc > 1:6258441/1‑35 (MQ=255) tGACTTACCTTCTTCTCCCCCCCAGCAAACTcccc > 1:12053541/1‑35 (MQ=255) tGACTTACCTTCTTCTCCCCCCCAGCAAACTcccc > 1:12652352/1‑35 (MQ=255) tGACTTACCTTCTTCTCCCCCCCAGCAAACTcccc > 1:17559048/1‑35 (MQ=255) tGACTTACCTTCTTCTCCCCCCCAGCAAACTcccc < 1:14871942/35‑1 (MQ=255) gACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCa < 1:13788689/35‑1 (MQ=255) gACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCa < 1:11439303/35‑1 (MQ=255) aCTTACCTTCTTCTCCCCCCCAGCAAACTCCCCaa < 1:7410078/35‑1 (MQ=255) aCTTACCTTCTTCTCCCCCCCAGCAAACTCCCAaa < 1:12332855/35‑1 (MQ=255) cTTACCTTCTTCTCCCCCCCAGCAAACTCCCCGAc > 1:8261348/1‑35 (MQ=255) cTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAAc < 1:13866216/35‑1 (MQ=255) cTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAAc > 1:351711/1‑35 (MQ=255) cTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAAc > 1:7322050/1‑35 (MQ=255) ttACCTTCTTCTCCCCCCCAGCAAACTCCCCAACa < 1:831856/35‑1 (MQ=255) ttACCTTCTTCTCCCCCCCAGCAAACTCCCCAACa > 1:7581561/1‑35 (MQ=255) ttACCTTCTTCTCCCCCCCAGCAAACTCCCCAACa > 1:11256151/1‑35 (MQ=255) ttACCTTCTTCTCCCCCCCAGCAAACTCCCCAACa < 1:9222766/35‑1 (MQ=255) ttACCTTCTTCTCCCCCCCAGCAAACTCCCCAACa < 1:6781920/35‑1 (MQ=255) ttACCTTCTTCTCCCCCCCAGCAAACT‑CCCAACAt > 1:9538092/1‑35 (MQ=38) ntACCTTCTTCTCCCCCCCAGCAAACTCCCCAACa > 1:17080976/2‑35 (MQ=255) tACCTTCTTCTCCCCCCCAGCAAACTCCCCAACAt > 1:8582510/1‑35 (MQ=255) tACCTTCTTCTCCCCCCCAGCAAACTCCCCAACAt < 1:15400059/35‑1 (MQ=255) aCCTTCTTCTCCCCCCCAGCAAACTCCCCAACATc < 1:2184804/35‑1 (MQ=255) aCCTTCTTCTCCCCCCCAGCAAACTCCCCAACATc < 1:12322576/35‑1 (MQ=255) aCCATCTTCTCCCCCCCAGCAAACTCCCCAACATc > 1:13156575/1‑35 (MQ=255) ccTTCTTCTCCCCCCCAGCAAACTCCCCAACATcc > 1:3732551/1‑35 (MQ=255) ttttttctCCCCCCCcctgccgctagtgtctacaa > 1:4617533‑M2/2‑15 (MQ=255) cttcttCTCCCCCCCAGCAAACTCCCCAACATccc < 1:17604297/35‑1 (MQ=255) cttcttCTCCCCCCCAGCAAACTCCCCAACATccc > 1:20583845/1‑35 (MQ=255) cttcttCTCCCCCCCAGCAAACTCCCCAACATccc > 1:13082327/1‑35 (MQ=255) cttcttCTCCCCCCCAGCAAACTCCCCAACATccc < 1:16157192/35‑1 (MQ=255) cttcttCTCCCCCCCAGCAAACTCCCCAACATccc < 1:1042522/35‑1 (MQ=255) ttcttcTCCCCCCCAGCAAACTCCCCAACATCCcg < 1:18753577/35‑1 (MQ=255) tcttctCCCCCCCcctgccgctagtgtctacaatc > 1:2210310‑M2/1‑13 (MQ=255) cttctCCCCCCCAGCAAACTCCCCAACATCCcgct < 1:6765990/35‑2 (MQ=255) cttctCCCCCCCAGCAAACTCCCCAACATCCcgcg > 1:19167607/1‑35 (MQ=255) ttctCCCCCCCAGCAAACTCCCCAACATCCCGCGt < 1:558762/35‑1 (MQ=255) tctcCCCCCCcctgccgctagtgtctacaatctct > 1:7070088‑M2/1‑10 (MQ=255) tctcCCCCCCAGCAAACTCCCCAACATCCCGCGTa > 1:11955348/1‑35 (MQ=255) tctcCCCCCCAGCAAACTCCCCAACATCCCGCGTa > 1:2973238/1‑35 (MQ=255) cccccccccccctgccgctagtgtctacaatctct > 1:1797968‑M2/4‑10 (MQ=255) ctcCCCCCCAGCAAACTCCCCAACATCCCGCGTAc > 1:16995461/1‑35 (MQ=255) tcCCCCCCcctgccgctagtgtctacaatctcttt > 1:8733079‑M2/1‑8 (MQ=255) tcCCCCCCAGCAAACTCCCCAACATCCCGCGTACa < 1:1162275/35‑1 (MQ=255) tcCCCCCCAGCAAACTCCCCAACATCCCGCGTACa < 1:4821497/35‑1 (MQ=255) tcCCCCCCAGCAAACTCCCCAACATCCCGCGTACa < 1:18247753/35‑1 (MQ=255) cctccccccctgccgctagtgtctacaatctcttt > 1:15451741‑M2/4‑8 (MQ=255) cccccccccctgccgctagtgtctacaatctcttt > 1:406835‑M2/2‑8 (MQ=255) cccccccccctgccgctagtgtctacaatctcttt > 1:17463084‑M2/2‑8 (MQ=255) cccccccAGCAAACTCCCCAACATCCCGCGTACaa > 1:2477678/1‑35 (MQ=255) cccccccctgccgctagtgtctacaatctctttaa > 1:4349664‑M2/1‑6 (MQ=255) ccccccAGCAAACTCCCCAACATCCCGCGTACAAt < 1:1423965/35‑1 (MQ=255) ccccccAGCAAACTCCCCAACATCCCGCGTACAAt < 1:7274678/35‑1 (MQ=255) ccccccctgccgctagtgtctacaatctctttaat > 1:20032867‑M2/1‑5 (MQ=255) ccccccctgccgctagtgtctacaatctctttaat > 1:18500721‑M2/1‑5 (MQ=255) ccccccctgccgctagtgtctacaatctctttaat > 1:3149231‑M2/1‑5 (MQ=255) cccccAGCAAACTCCCCAACATCCCGCGTACAATc > 1:10674131/1‑35 (MQ=255) cccccAGCAAACTCCCCAACATCCCGCGTACAATc > 1:5851018/1‑35 (MQ=255) cccccAGCAAACTCCCCAACATCCCGCGTACAATc < 1:4735095/35‑1 (MQ=255) cccccAGCAAACTCCCCAACATCCCGCGTACAATc < 1:10163078/35‑1 (MQ=255) cccccAGCAAACTCCCCAACATCCCGCGTACAATc > 1:16323938/1‑35 (MQ=255) cccccctgccgctagtgtctacaatctctttaatt > 1:6482195‑M2/1‑4 (MQ=255) ccccAGCAAACTCCCCAACATCCCGCGTACAATCt > 1:15600277/1‑35 (MQ=255) ccccctgccgctagtgtctacaatctctttaattt > 1:16034747‑M2/1‑3 (MQ=255) ccccctgccgctagtgtctacaatctctttaattt > 1:13578383‑M2/1‑3 (MQ=255) ccccctgccgctagtgtctacaatctctttaattt > 1:18043660‑M2/1‑3 (MQ=255) cccAGCAAACTCCCCAACATCCCGCGTACAATCTg < 1:7781239/35‑1 (MQ=255) cccAGCAAACTCCCCAACATCCCGCGTACAATCTg < 1:11779209/35‑1 (MQ=255) cccctcccgctagtgtctacaatctctttaatttg > 1:4519857‑M2/1‑2 (MQ=255) ccctgccgctagtgtctacaatctctttaatttgt > 1:4599232‑M2/1‑1 (MQ=255) ccctgccgctagtgtctacaatctctttaatttgt > 1:14720496‑M2/1‑1 (MQ=255) cAGCAAACTCCCCAACATCCCGCGTACAATCTGAt > 1:4264018/1‑35 (MQ=255) | ACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGAT > REL606/4471772‑4471840 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |