New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3625460 | 64 (0.620) | 22 (0.260) | 7/40 | NT | 30.7% | pseudogene (3/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
? | REL606 | = 3992020 | 46 (0.540) | coding (141/510 nt) | ECB_03720 | conserved hypothetical protein |
Only 100 of 156 total aligned reads displayed.
TGGTTGTTGTCCCCACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACGGCCATTCACCAATCCCCTACTT > REL606/3625426‑3625494 | tGGTTGTTGTCCCCACGCCTCCCCGCCCCCCC‑TGC < 1:15659230‑M1/35‑1 (MQ=255) ggTTGTTGTCCCCACGCCTCCCCGCCCCCCC‑TGCa > 1:20293186/1‑35 (MQ=255) ggTTGTTGTCCCCACGCCTCCCCGCCCCCCC‑TGCa > 1:8808409/1‑35 (MQ=255) ggTTGTTGTCCCCACGCCTCCCCGCCCCCCC‑TGCa < 1:12738087/35‑1 (MQ=255) ggTTGTTGTCCCCACGCCTCCCCGCCCCCCC‑TGCa > 1:5908933/1‑35 (MQ=255) ggTTGTTGTCCCCACGCCTCCCCGCCCCCCC‑TGCa > 1:15790644/1‑35 (MQ=255) ggTTGTTGTCCCCACGCCTCCCCGCCCCCCC‑TGCa < 1:4349846/35‑1 (MQ=255) gttgttGTCCCCACGCCTCCCCGCCCCCCC‑TGCaa > 1:6194396/1‑35 (MQ=255) ttgttgTCCCCACGCCTCCCCGCTCCCCC‑CGCAAt > 1:12672660/1‑35 (MQ=38) ttgttgTCCCCACGCCTCCCCGCCCCCCC‑TGCAAt > 1:13834855/1‑35 (MQ=255) ttgttgTCCCCACGCCTCCCCGCCCCCCC‑TGCAAt < 1:7833310/35‑1 (MQ=255) tgttgtCCCCACGCCTCCCCGCCCCCCCATGCAAt > 1:2316326/1‑35 (MQ=38) tgttgtCCCCACGCCTCCCCGCCCCCCC‑TGCAAT‑c > 1:14286812/1‑35 (MQ=255) tgttgtCCCCACGCCTCCCCGCCCCCCC‑TGCAAT‑c > 1:3993635/1‑35 (MQ=255) gttgtCCCCACGCCTCCCCGCCCCCCC‑TGCAAT‑cc < 1:16468131/35‑1 (MQ=255) tgtCCCCACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCa > 1:5542695/1‑35 (MQ=255) tgtCCCCACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCa > 1:13872927/1‑35 (MQ=255) gtCCCCACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAg > 1:13713402/1‑35 (MQ=255) ccccCCCCCCCCCCCCCCCCCC‑TGCCATACCCAgg < 1:9678019/35‑2 (MQ=2) ccccCCCCCCCCCCCCCCCCCC‑TGCCAG‑CCCAgcg < 1:4933935/35‑3 (MQ=0) cccGCGCCTCCCCCCCCCCGC‑CACAAT‑TCTAGTag < 1:4857769/35‑2 (MQ=12) cccACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTAc < 1:12943112/35‑1 (MQ=255) cccACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTAc < 1:17229695/35‑1 (MQ=255) cccACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTAc > 1:8116624/1‑35 (MQ=255) ccACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACg > 1:12998095/1‑35 (MQ=255) ccACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACg > 1:12582013/1‑35 (MQ=255) ccAAGCCTCCCCGCACCCCC‑TGCAAT‑CCCAGTACg < 1:14454292/35‑1 (MQ=255) cACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACgg > 1:5716044/1‑35 (MQ=255) cACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACgg < 1:17826711/35‑1 (MQ=255) cACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACgg < 1:19775017/35‑1 (MQ=255) cACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACgg > 1:7501651/1‑35 (MQ=255) aCGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACGGc > 1:1917258/1‑35 (MQ=255) cGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACGGcc > 1:6062101/1‑35 (MQ=255) cGCCTCCCCGCCCCCCC‑TGCAAT‑CCAAGTACGGcc < 1:15124836/35‑1 (MQ=255) gCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACGGCCa > 1:1164153/1‑35 (MQ=255) gCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACGGCCa > 1:8873445/1‑35 (MQ=255) gCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACGGCCa > 1:4659881/1‑35 (MQ=255) gCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACGGCCa > 1:14927046/1‑35 (MQ=255) gCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACGGCCa > 1:14099564/1‑35 (MQ=255) ccctCCCCCCCCCCCC‑TGCcattgaaacggatccc < 1:16997067‑M1/34‑17 (MQ=255) ccTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACGGCCAt > 1:19875507/1‑35 (MQ=255) ccTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACGGCCAt > 1:5393694/1‑35 (MQ=255) cTCCCCCCCCCCCC‑TGCcattgaaacggatcccgg < 1:1308403‑M1/35‑19 (MQ=255) tCCCCGCCCCCCC‑TGCAAT‑CCCAGTACGGCCATTc > 1:16922706/1‑35 (MQ=255) tCCCCCCCCCCCC‑TGCcattgaaacggatcccggt < 1:6995215‑M1/35‑20 (MQ=255) ccccccCCCCCCC‑TGCcattgaaacggatcccggt < 1:1995988‑M1/34‑20 (MQ=255) acccccCCCCCCC‑TGCcattgaaacggatcccggt < 1:6293306‑M1/34‑20 (MQ=255) tccccCCCCCCC‑TGCcattgaaacggatcccggtg < 1:11425242‑M1/34‑21 (MQ=255) ccccGCCCCCCC‑TGCAAT‑CCCAGTACGGCCATTCa > 1:5776475/1‑35 (MQ=255) ccccCCCCCCCC‑TGCcattgaaacggatcccggtg < 1:10625689‑M1/35‑21 (MQ=255) ccccCCCCCCCC‑TGCcattgaaacggatcccggtg < 1:7546485‑M1/35‑21 (MQ=255) cccGCCCCCCC‑TGCAAT‑CCCAGTACGGCCAATCAc > 1:2073138/1‑35 (MQ=255) ccGCCCCCCC‑TGCcattgaaacggatcccggtgca < 1:13469155‑M1/35‑23 (MQ=255) ccGCCCCCCC‑TGCAAT‑CCCAGTACGGCCATTCAcc < 1:3580360/35‑1 (MQ=255) ccccccccc‑tgCcattgaaacggatcccggtgcaa < 1:17371525‑M1/33‑24 (MQ=255) gCCCCCCC‑TGCAAT‑CCCAGTCCGGCCATTCACCaa < 1:10964256/35‑1 (MQ=255) gCCCCCCC‑TGCAAT‑CCCAGTACGGCCATTCACCaa > 1:7252871/1‑35 (MQ=255) gCCCCCCC‑TGCAAT‑CCCAGTACGGCCATTCACCaa > 1:9124841/1‑35 (MQ=255) gCCCCCCC‑TGCAAT‑CCCAGTACGGCCATTCACCaa > 1:9635260/1‑35 (MQ=255) gCCCCCCC‑TGCAAT‑CCCAGTACGGCCATTCAACaa > 1:5380808/1‑35 (MQ=255) cccccccc‑tGCcattgaaacggatcccggtgcaag < 1:7222412‑M1/34‑25 (MQ=255) ccccccc‑TGCcattgaaacggatcccggtgcaagt < 1:9414892‑M1/35‑26 (MQ=255) ccccccc‑TGCAAT‑CCCAGTACGGCTATTCACCAAt > 1:11134030/1‑35 (MQ=255) cccccc‑TGCcattgaaacggatcccggtgcaagtg < 1:376980‑M1/35‑27 (MQ=255) cccccc‑TGCcattgaaacggatcccggtgcaagtg < 1:15353296‑M1/35‑27 (MQ=255) cccccc‑TGCcattgaaacggatcccggtgcaagtg < 1:10130357‑M1/35‑27 (MQ=255) ccccc‑TGCAAT‑CCCAGTACGGCCATTCACCAATcc > 1:13455153/1‑35 (MQ=255) cccc‑TGCcattgaaacggatcccggtgcaagtgcc < 1:18666712‑M1/35‑29 (MQ=255) cccc‑TGCcattgaaacggatcccggtgcaagtgcc < 1:17840025‑M1/35‑29 (MQ=255) cccc‑TGCAAT‑CCCAGTCCGGCCATTCACCAATccc < 1:9953641/35‑1 (MQ=255) ccc‑TGCcattgaaacggatcccggtgcaagtgcct < 1:104660‑M1/35‑30 (MQ=255) cc‑TGCcattgaaacggatcccggtgcaagtgcctt < 1:10238596‑M1/35‑31 (MQ=255) cc‑TGCcattgaaacggatcccggtgcaagtgcctt < 1:908297‑M1/35‑31 (MQ=255) cc‑TGCcattgaaacggatcccggtgcaagtgcctt < 1:6349489‑M1/35‑31 (MQ=255) cc‑TGCcattgaaacggatcccggtgcaagtgcctt < 1:13474168‑M1/35‑31 (MQ=255) cc‑TGCcattgaaacggatcccggtgcaagtgcctt < 1:161849‑M1/35‑31 (MQ=255) cc‑TCCAAT‑CCCAGTCCGGCCATTCACCAATCCCCt < 1:3731525/35‑1 (MQ=25) c‑TGCcattgaaacggatcccggtgcaagtgccttc < 1:7052560‑M1/35‑32 (MQ=255) c‑TGCcattgaaacggatcccggtgcaagtgccttc > 1:17163340‑M1/1‑4 (MQ=255) c‑TGCAAT‑CCCAGTACGGCCATTCACCAATCCCCTa > 1:2734711/1‑35 (MQ=255) c‑TGCAAC‑CCCAGTCCGGCCATTCACCAATCCCCTa < 1:1235932/35‑1 (MQ=25) tccAAC‑CCCAGTCCGGCCATTCACCAATCCCCTAc < 1:5177115/33‑1 (MQ=25) tGCcattgaaacggatcccggtgcaagtgccttcc > 1:10116050‑M1/1‑3 (MQ=255) tGCcattgaaacggatcccggtgcaagtgccttcc > 1:951964‑M1/1‑3 (MQ=255) tGCcattgaaacggatcccggtgcaagtgccttcc > 1:13384080‑M1/1‑3 (MQ=255) tGCAAT‑CCCAGTCCGGCCATTCACCAATCACCTAc < 1:19388156/35‑1 (MQ=38) tGCAAT‑CCCAGTACGGCCATTCACCAATCCCCTAc > 1:8965589/1‑35 (MQ=255) gCcattgaaacggatcccggtgcaagtgccttccc < 1:16314315‑M1/35‑34 (MQ=255) gCcattgaaacggatcccggtgcaagtgccttccc > 1:16509266‑M1/1‑2 (MQ=255) gCcattgaaacggatcccggtgcaagtgccttccc < 1:8333603‑M1/35‑34 (MQ=255) gCcattgaaacggatcccggtgcaagtgccttccc < 1:10293208‑M1/35‑34 (MQ=255) gCcattgaaacggatcccggtgcaagtgccttccc > 1:5233909‑M1/1‑2 (MQ=255) gCAAT‑CCCAGTACGGCCATTCACCAATCCCCTACt < 1:7187885/35‑1 (MQ=255) gCAAT‑CCCAGTACGGCCATTCACCAATCCCCTACt < 1:11696704/35‑1 (MQ=255) cccattgaaacggatcccggtgcaagtgccttccc > 1:27020‑M1/2‑2 (MQ=255) ccattgaaacggatcccggtgcaagtgccttccct < 1:15521541‑M1/35‑35 (MQ=255) ccattgaaacggatcccggtgcaagtgccttccct < 1:18805687‑M1/35‑35 (MQ=255) ccattgaaacggatcccggtgcaagtgccttccct > 1:19098239‑M1/1‑1 (MQ=255) ccattgaaacggatcccggtgcaagtgccttccct < 1:2842419‑M1/35‑35 (MQ=255) cAAT‑CCCAGTACGGCCATTCACCAATCCCCTACtt > 1:7862733/1‑35 (MQ=255) | TGGTTGTTGTCCCCACGCCTCCCCGCCCCCCC‑TGCAAT‑CCCAGTACGGCCATTCACCAATCCCCTACTT > REL606/3625426‑3625494 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |