New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1006225 | 100 (0.970) | 9 (0.110) | 3/38 | NT | 13.2% | intergenic (‑149/+20) | asnS/pncB | asparaginyl‑tRNA synthetase/nicotinate phosphoribosyltransferase |
? | REL606 | = 4210740 | 39 (0.480) | intergenic (‑178/+75) | yjbD/lysC | hypothetical protein/aspartate kinase III |
AGCGAAAGATTTCGGAATTAAAGGTAAAAAAAGGGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1006187‑1006225 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagccTGTACTCTGTTAACCAGCGTCTTTATCGGAGAAT < REL606/4210740‑4210707 AGCGAAAGATTTCGGAATTAAAGGTAAAAAAAGGG > 1:2480086/1‑35 AGCGAAAGATTTCGGAATTAAAGGTAAAAAAAGGG < 1:19501684/35‑1 AGCGAAAGATTTCGGAATTAAAGGTAAAAAAAGGG < 1:4997820/35‑1 AGCGAAAGATTTCGGAATTAAAGGTAAAAAAAGGG < 1:10094472/35‑1 GCGAAAGATTTCGGAATTAAAGGTAAAAAAAGGGA < 1:12198565/35‑1 GCGAAAGATTTCGGAATTAAAGGTAAAAAAAGGGA > 1:8588803/1‑35 GCGAAAGATTTCGGAATTAAAGGTAAAAAAAGGGA > 1:6287570/1‑35 GCGAAAGATTTCGGAATTAAAGGTAAAAAAAGGGA > 1:3880256/1‑35 CGAAAGATTTCGGAATTAAAGGTAAAAAAAGGGAG < 1:3238953/35‑1 CGAAAGATTTCGGAATTAAAGGTAAAAAAAGGGAG < 1:3446064/35‑1 CGAAAGATTTCGGAATTAAAGGTAAAAAAAGGGAG > 1:4366773/1‑35 GAAAGATTTCGGAATTAAAGGTAAAAAAAGGGAGC < 1:14801063/35‑1 AAAGATTTCGGAATTAAAGGTAAAAAAAGGGAGCC < 1:7177916/35‑1 AAAGATTTCGGAATTAAAGGTAAAAAAAGGGAGCC > 1:14249185/1‑35 AAAGATTTCGGAATTAAAGGTAAAAAAAGGGAGCC > 1:14901738/1‑35 AAAGATTTCGGAATTAAAGGTAAAAAAAGGGAGCC < 1:15847205/35‑1 AAAGATTTCGGAATTAAAGGTAAAAAAAGGGAGCC > 1:10640103/1‑35 catAAAAAAGGGAGCCTGTACTCTGTTAACCAGCG < 1:19766722/32‑1 aatAAAAAAGGGAGCCTGTACTCTGTTAACCAGCG < 1:9298909/32‑1 aAAAATAAGGGAGCCTGTACTCTGTTAACCAGCGT < 1:6616218/34‑1 tAAAAAAGGGAGCCTGTACTCTGTTAACCAGCGTC < 1:3441115/34‑1 AAAAAAAGGGAGCCTGTACTCTGTTAACCAGCGTC < 1:8682196/35‑1 AAAAAAAGGGAGCCTGTACTCTGTTAACAAGCGTC < 1:18343254/35‑1 AAAAAAACGGAGCCTGTACTCTGTTAACCAGCGTC < 1:20259961/35‑1 AAAAAAGGGAGCCTGTACTCTGTTAACCAGCGTCT < 1:1577614/35‑1 AAAAAGGGAGCCTGTACTCTGTTAACCAGCGTCTT < 1:9575715/35‑1 AAAGGGAGCCTGTACTCTGTTAACAAGCGTCTTTA < 1:4691922/35‑1 AAACGGAGCCTGTACTCTGTTAACCAGCGTCTTTA < 1:8215575/35‑1 AAACGGAGCCTGTACTCTGTTAACCAGCGTCTTTA < 1:7975074/35‑1 AAGGGAGCCTGTACTCTGTTAACCAGCGTCTTTAT < 1:2476837/35‑1 AAGGGAGCCTGTACTCTGTTAACCAGCGTCTTTAT < 1:5909420/35‑1 acGGAGCCTGTACTCTGTTAACCAGCGTCTTTATC < 1:16570588/33‑1 AGGGAGCCTGTACTCTGTTAACCAGCGTCTTTATC < 1:3835310/35‑1 AGGGAGCCTGTACTCTGTTAACCAGCGTCTTTATC < 1:17729032/35‑1 GGGAGCCTGTACTCTGTTAACCAGCGTCTTTATCG < 1:16451582/35‑1 GGGAGCCTGTACTCTGTTAACCAGCGTCTTTATCG < 1:3895944/35‑1 GGAGCCTGTACTCTGTTAACCAGCGTCTTTATCGG < 1:3389132/35‑1 GGAGCCTGTACTCTGTTAACCAGCGTCTTTATCGG < 1:1810542/35‑1 GAGCCTGTACTCTGTTAACCAGCGTCTTTATCGGA > 1:1339657/1‑35 GAGCCTGTACTCTGTTAACCAGCGTCTTTATCGGA > 1:6121388/1‑35 GAGCCTGTACTCTGTTAACCAGCGTCTTTATCGGA < 1:20027064/35‑1 GAGCCTGTACTCTGTTAACCAGCGTCTTTATCGGA < 1:20105244/35‑1 AGCCTGTACTCTGTTAACCAGCGTCTTTATCGGAG > 1:4288182/1‑35 AGCCTGTACTCTGTTAACCAGCGTCTTTATCGGAG < 1:19346280/35‑1 AGCCTGTACTCTGTTAACCAGCGTCTTTATCGGAG < 1:19617444/35‑1 AGCCTGTACTCTGTTAACCAGCGTCTTTATCGGAG < 1:14378670/35‑1 GCCTGTACTCTGTTAACCAGCGTCTTTATCGGAGA > 1:12960637/1‑35 GCCTGTACTCTGTTAACCAGCGTCTTTATCGGAGA < 1:71416/35‑1 GCCTGTACTCTGTTAACCAGCGTCTTTATCGGAGA < 1:14335411/35‑1 GCCTGTACTCTGTTAACCAGCGTCTTTATCGGAGA > 1:6466349/1‑35 GCCTGTACTCTGTTAACCAGCGTCTTTATCGGAGA > 1:19429630/1‑35 CCTGTACTCTGTTAACCAGCGTCTTTATCGGAGAA < 1:9069847/35‑1 CCTGTACTCTGTTAACCAGCGTCTTTATCGGAGAA < 1:10273163/35‑1 CTGTACTCTGTTAACCAGCGTCTTTATCGGAGAAT < 1:6600453/35‑1 CTGTACTCTGTTAACCAGCGTCTTTATCGGAGAAT < 1:6807745/35‑1 CTGTACTCTGTTAACCAGCGTCTTTATCGGAGAAT < 1:1988898/35‑1 CTGTACTCTGTTAACCAGCGTCTTTATCGGAGAAT > 1:297255/1‑35 CTGTACTCTGTTAACCAGCGTCTTTATCGGAGAAT < 1:4870847/35‑1 CTGTACTCTGTTAACCAGCGTCTTTATCGGAGAAT > 1:12677261/1‑35 CTGTACTCTGTTAACCAGCGTCTTTATCGGAGAAT < 1:9037953/35‑1 CTGTACTCTGTTAACCAGCGTCTTTATCGGAGAAT < 1:11310259/35‑1 CTGTACTCTGTTAACCAGCGTCTTTATCGGAGAAT < 1:9535666/35‑1 AGCGAAAGATTTCGGAATTAAAGGTAAAAAAAGGGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1006187‑1006225 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagccTGTACTCTGTTAACCAGCGTCTTTATCGGAGAAT < REL606/4210740‑4210707 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |