New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 422594 = | 77 (0.750) | 21 (0.220) | 7/44 | NT | 23.0% | intergenic (‑281/+181) | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
? | REL606 | = 3721305 | 76 (0.740) | coding (669/1191 nt) | lldD | L‑lactate dehydrogenase, FMN‑linked |
Only 100 of 161 total aligned reads displayed.
GCAAACCGACCGGACTGGAAGATTACATCGGCTGGCTGGGGAATAACTTCGATCCGTCCATCTCATGGA > REL606/3721271‑3721339 | gCAAACCGGCCGGACTGGAAGATTACATCggctgg < 1:15994254/35‑1 (MQ=255) gCAAACCGACCGGACTGGAAGATTACATCggctgg < 1:7360754/35‑1 (MQ=255) cAAACCGACCGGACTGGAAGATTACATCggctggc < 1:14297767/35‑1 (MQ=255) aaaCCGACCGGACTGGAAGATTACATCggctggct < 1:9477678/35‑1 (MQ=255) aaaCCGACCGGACTGGAAGATTACATCGGCTGGgg < 1:7749575‑M2/35‑3 (MQ=255) aaaCCGACCGGACTGGAAGATTACATCGGCTGGgg < 1:7409213‑M2/35‑3 (MQ=255) aaaCCGACCGGACTGGAAGATTACATCGGCTGGgg < 1:6995359‑M2/35‑3 (MQ=255) acccgaccgGACTGGAAGATTACATCGgctggctg < 1:6015966/33‑1 (MQ=255) acccgaccgGACTGGAAGATTACATCGgctggctg < 1:10149640/33‑1 (MQ=255) acccgaccgGACTGGAAGATTACATCGgctggctg < 1:4501187/33‑1 (MQ=255) aaCCGACCGGACTGGAAGATTACATCGgctggctg < 1:13567915/35‑1 (MQ=255) accgaccgGACTGTAAGATTACATCGGCTGGgggg < 1:16229267‑M2/35‑5 (MQ=255) accgaccgGACTGGGAGATTACATCGGCTGGgggg < 1:19098206‑M2/35‑5 (MQ=255) accgaccgGACTGGAAGATTACATCGGctggctgg < 1:1844168/35‑1 (MQ=255) accgaccgGACTGGAAGATTACATCGGctggctgg < 1:7479740/35‑1 (MQ=255) ccgaccgGACTGGAAGATTACATCGGCTGGgtggg < 1:18972094‑M2/35‑6 (MQ=255) ccgaccgGACTGGAAGATTACATCGGCTGGCTggg < 1:530528/35‑1 (MQ=255) cgaccgGACTGGAAGATTACATCGGCTGGgggggg < 1:3488904‑M2/35‑7 (MQ=255) cgaccgGACTGGAAGATTACATCGGCTGGgggggg < 1:16872806‑M2/35‑7 (MQ=255) cgaccgGACTGGAAGATTACATCGGCTGGCTgggg < 1:9820710/35‑1 (MQ=255) gagcgGACTGGAAGATTACATCGGCTGGCTGGGGa < 1:15967358/32‑1 (MQ=255) gaccgGACTGGAAGATTACATCGGCTGGggggggg < 1:10077958‑M2/35‑8 (MQ=255) gaccgGACTGGAAGATTACATCGGCTGGggggggg < 1:1625819‑M2/35‑8 (MQ=255) gaccgGACTGGAAGATTACATCGGCTGGggggggg < 1:5169051‑M2/35‑8 (MQ=255) gaccgGACTGGAAGATTACATCGGCTGGggggggg < 1:13580606‑M2/35‑8 (MQ=255) gaccgGACTGGAAGATTACATCGGCTGGCTGGGGa < 1:10922841/35‑1 (MQ=255) accgGACTGGAAGATTACATCGGCTGGgggggggg < 1:4258475‑M2/35‑9 (MQ=255) accgGACTGGAAGATTACATCGGCTGGgggggggg < 1:4534102‑M2/35‑9 (MQ=255) ccgGACTGGAAGATTACATCGGCTGGggggggggg < 1:18230304‑M2/35‑10 (MQ=255) ccgGACTGGAAGATTACATCGGCTGGgcggggggg < 1:2384379‑M2/35‑10 (MQ=255) ccgGACTGGAAGATTACATCGGCTGGCTGGGGAAt < 1:5907035/35‑1 (MQ=255) cgGACTGGAAGATTACATCGGCTGGggggggggca < 1:5192345‑M2/35‑11 (MQ=255) ggACTGGAAGATTACATCGGCTGGgggggggggaa < 1:18478216‑M2/35‑12 (MQ=255) ggACTGGAAGATTACATCGGCTGGgggggggggaa < 1:11784737‑M2/35‑12 (MQ=255) gACTGGAAGATTACATCGGCTGGgtgggggggaaa < 1:12207830‑M2/35‑13 (MQ=255) gACTGGAAGATTACATCGGCTGGgggggggggaaa < 1:18016465‑M2/35‑13 (MQ=255) gACTGGAAGATTACATCGGCTGGCTGGGGAATAAc < 1:15527309/35‑1 (MQ=255) gACTGGAAGATTACATCGGCTGGCTGGGGAATAAc < 1:6410208/35‑1 (MQ=255) aCTGGAAGATTCCATCGGCTGGCTGGGGAATAACt < 1:2532215/35‑1 (MQ=255) aCTGGAAGATTACATCGGCTGGgggggggggaaaa < 1:4658852‑M2/35‑14 (MQ=255) aCTGGAAGATTACATCGGCTGGCTGGGGAATAACt < 1:1058163/35‑1 (MQ=255) cTGGAAGATTACATCGGCTGGCTGGGGAATAACtt < 1:13002724/35‑1 (MQ=255) cTGGAAGATTACATCGGCTGGCTGGGGAATAACtt < 1:4245119/35‑1 (MQ=255) atGGAAGATTACATCGGCTGGCTGGGGAATAACtt < 1:6544212/34‑1 (MQ=255) tctaaGATTACATCGGCTGGCTGGGGAATAACTTc < 1:9788295/32‑1 (MQ=255) tGGGAGATTACATCGGCTGGCTGGGGAATAACTTc < 1:3962295/35‑1 (MQ=255) ggAAGATTACATCGGCTGGGGGGGGGAGAAATTCg > 1:6908663/1‑35 (MQ=12) ggAAGATTACATCGGCTGGCTGGGGAATAACTTCg < 1:9948011/35‑1 (MQ=255) gAAGATTACATCGGCTGGCTGGGGAATAACTTCGa < 1:18498916/35‑1 (MQ=255) gAAGATTACATCGGCTGGCTGGGGAATAACTTCGa < 1:11669002/35‑1 (MQ=255) gAAGATTACATCGGCTGGCTGGGGAATAACTTCGa < 1:13135552/35‑1 (MQ=255) aaGATTCCATCGGCTGGCTGGGGAATAACTTCGAt < 1:10504162/35‑1 (MQ=255) aaGATTACATCGGCTGGCTGGGGAATAACTTCGAt < 1:12330152/35‑1 (MQ=255) aaGATTACATCGGCTGGCTGGGGAATAACTTCGAt < 1:9583183/35‑1 (MQ=255) aaGATTACATCGGCTGGCTGGGGAATAACTTCGAt < 1:6786914/35‑1 (MQ=255) aaGATTACATCGGCTGGCTGGGGAATAACTTCGAt < 1:14505124/35‑1 (MQ=255) aaGATTACATCGGCTGGCTGGGGAATAACTTCGAt < 1:8487149/35‑1 (MQ=255) aGATTACATCGGCTGGCTGGGGAATAACTTCGATc < 1:6327729/35‑1 (MQ=255) aGATTACATCGGCTGGCTGGGGAATAACTTCGATc < 1:8655354/35‑1 (MQ=255) aGATAACATCGGCTGGCTGGGGAATAACTTCGATc < 1:12988936/35‑1 (MQ=255) aTTACATCGGCTGGCTGGGGAATAACTTCGATCCg < 1:3655490/35‑1 (MQ=255) aTTACATCGGCTGGCTGGGGAATAACTTCGATCCg < 1:4937018/35‑1 (MQ=255) ttgcATCGGCTGGCTGGGGAATAACTTCGATCCGt < 1:12348010/32‑1 (MQ=255) ttccATCGGCTGGCTGGGGAATAACTTCGATCCGt < 1:9147572/32‑1 (MQ=255) ttccATCGGCTGGCTGGGGAATAACTTCGATCCGt < 1:14774911/32‑1 (MQ=255) ttACATCGGCTGGCTGGGGAATAACTTCGATCCGt < 1:14102785/35‑1 (MQ=255) ttACATCGGCTGGCTGGGGAATAACTTCGATCCGt < 1:16470918/35‑1 (MQ=255) tACATCGGCTGGCTGGGGAATAACTTCGATCCGTc < 1:504094/35‑1 (MQ=255) aCATCGGCTGGCTGGGGAATAACTTCGATCCGTcc < 1:2179778/35‑1 (MQ=255) aCATCGGCTGGCTGGGGAATAACTTCGATCCGTcc < 1:11946894/35‑1 (MQ=255) cATCGGCTGGCTGGGGAATAACTTCGATCCGTCCa < 1:3161809/35‑1 (MQ=255) aTCGGCTGGCTGGGGAATAACTTCGATCCGTCCAt < 1:15502034/35‑1 (MQ=255) aTCGGCTGGCTGGGGAATAACTTCGATACGTCCAt < 1:4002200/35‑1 (MQ=255) tCGGCTGGCTGGGGAATAACTTCGATCCGTCCAtc < 1:5861836/35‑1 (MQ=255) cGGCTGGCTGGGGAATAACTTCGATCCGTCCAtct < 1:11238845/35‑1 (MQ=255) cGGCTGGCTGGGGAATAACTTCGATCCGTCCAtct < 1:3929431/35‑1 (MQ=255) cGGCTGGCTGGGGAATAACTTCGATCCGTCCAtct < 1:2623677/35‑1 (MQ=255) ggctggctGGGGAATAACTTCGATCCGTCCAtctc < 1:13353849/35‑1 (MQ=255) ggctggctGGGGAATAACTTCGATCCGTCCAtctc > 1:9726988/1‑35 (MQ=255) gctggctgGGGAATAACTTCGATCCGTCCATCTCa < 1:7791715/35‑1 (MQ=255) gctggctgGGGAATAACTTCGATCCGTCCATCTCa < 1:13382669/35‑1 (MQ=255) ctggctggGGAATAACTTCGATCCGTCCAtctcct > 1:15151100/1‑33 (MQ=255) ctggctggGGAATAACTTCGATCCGTCCATCTCAt > 1:9613409/1‑35 (MQ=255) ctggctggGGAATAACTTCGATCCGTCCATCTCAt > 1:14577116/1‑35 (MQ=255) ctggctggGGAATAACTTCGATCCGTCCATCTCAt < 1:397328/35‑1 (MQ=255) ctggctggGGAATAACTTCGATCCGTCCATCTCAt < 1:2916183/35‑1 (MQ=255) ctggctggGGAATAACTTCGATCCGTCCATCTCAt < 1:17951714/35‑1 (MQ=255) ctggctggGGAATAACTTCGATCCGTCCATCTCAt > 1:18076842/1‑35 (MQ=255) ctggctggGGAATAACTTCGATCCGTCCATATCAt < 1:11093144/35‑1 (MQ=255) tggctggGGAATAACTTCGATCCGTCCATCTCATg > 1:12718793/1‑35 (MQ=255) tggctggGGAATAACTTCGATCCGTCCATCTCATg > 1:16045086/1‑35 (MQ=255) tggctggGGAATAACTTCGATCCGTCCATCTCATg > 1:12039814/1‑35 (MQ=255) tggctggGGAATAACTTCGATCCGTCCATCTCATg < 1:16569512/35‑1 (MQ=255) tggctggGGAATAACTTCGATCCGTCCATCTCATg > 1:17767410/1‑35 (MQ=255) tggctggGGAATAACTTCGATCCGTCCATCTCATg > 1:9223510/1‑35 (MQ=255) tggctggGGAATAACTTCGATCCGTCCATCTCATg < 1:18320798/35‑1 (MQ=255) ggctggGGAATAACTTCGATCCGTCCATCTCATgg > 1:19736504/1‑35 (MQ=255) ggctggGGAATAACTTCGATCCGTCCATCTCATgg > 1:2311630/1‑35 (MQ=255) gctggGGAATAACTTCGATCCGTCCATCTCATGGa > 1:6013838/1‑35 (MQ=255) gctggGGAATAACTTCGATCCGTCCATCTCATGGa < 1:17735917/35‑1 (MQ=255) | GCAAACCGACCGGACTGGAAGATTACATCGGCTGGCTGGGGAATAACTTCGATCCGTCCATCTCATGGA > REL606/3721271‑3721339 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |