New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 61503553 (0.520)4 (0.050) 3/38 NT 7.4% coding (157/198 nt) ybdD hypothetical protein
?REL606 = 3625455 58 (0.710)pseudogene (8/738 nt) yhjQ b3534; cell division protein (chromosome partitioning ATPase)

Only 100 of 121 total aligned reads displayed.

GATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTG  >  REL606/615001‑615069
                                  |                                  
gATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGG                                    >  1:5756860‑M1/1‑35 (MQ=255)
gATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGG                                    <  1:1941949‑M1/35‑1 (MQ=255)
gATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGG                                    <  1:6590694‑M1/35‑1 (MQ=255)
 aTGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGg                                   >  1:12809703‑M1/1‑34 (MQ=255)
 aTGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGg                                   >  1:10182038‑M1/1‑34 (MQ=255)
 aTGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGg                                   >  1:2161037‑M1/1‑34 (MQ=255)
 aTGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGa                                   <  1:9046361/35‑1 (MQ=255)
  tGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGgg                                  >  1:16848837‑M1/1‑33 (MQ=255)
  tGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGgg                                  >  1:13629208‑M1/1‑33 (MQ=255)
  tGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGAc                                  <  1:12142073/35‑1 (MQ=255)
  tGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGAc                                  <  1:2317855/35‑1 (MQ=255)
   gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGggg                                 >  1:15546750‑M1/1‑32 (MQ=255)
   gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGggg                                 >  1:8186072‑M1/1‑32 (MQ=255)
   gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGggg                                 >  1:3838761‑M1/1‑32 (MQ=255)
   gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGgcg                                 >  1:19988520‑M1/1‑32 (MQ=255)
   gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGagg                                 >  1:13261229/1‑33 (MQ=255)
   gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGAcg                                 <  1:9502686/35‑1 (MQ=255)
    tccTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgc                                <  1:1220764/34‑1 (MQ=255)
    aCCTACGAAGAGTTTTTCCGTGAGCGGCNGGAcgn                                >  1:3119541/1‑35 (MQ=255)
    aCCTACGAAGAGTTTTTCCGTGAGCGGCAGGgggg                                >  1:2966051‑M1/1‑31 (MQ=255)
    aCCTACGAAGAGTTTTTCCGTGAGCGGCAGGgggg                                >  1:8050182‑M1/1‑31 (MQ=255)
    aCCTACGAAGAGTTTTTCCGTGAGCGGCAGGgggg                                >  1:12412810‑M1/1‑31 (MQ=255)
    aCCTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgc                                <  1:10328246/35‑1 (MQ=255)
    aCCTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgc                                <  1:17625121/35‑1 (MQ=255)
    aCCTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgc                                <  1:17459552/35‑1 (MQ=255)
     ccTACGAAGAGTTTTTCCGTGAGCGGCAGGggggg                               >  1:12728805‑M1/1‑30 (MQ=255)
     ccTACGAAGAGTTTTTCCGTGAGCGGCAGGggggg                               >  1:7116218‑M1/1‑30 (MQ=255)
     ccTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcg                               <  1:18330848/35‑1 (MQ=255)
     ccTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcg                               <  1:3754744/35‑1 (MQ=255)
      cTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcgc                              <  1:20208349/35‑1 (MQ=255)
      cTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcgc                              <  1:5880555/35‑1 (MQ=255)
      cTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcgc                              <  1:18858179/35‑1 (MQ=255)
       tACGAAGAGTTTTTCCGTGAGCGGCAGGggggggg                             >  1:10534309‑M1/1‑28 (MQ=255)
       tACGAAGAGTTTTTCCGTGAGCGGCAGGgggggcg                             >  1:13561984‑M1/1‑28 (MQ=255)
       tACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcgcg                             <  1:8992833/35‑1 (MQ=255)
       tACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcgcg                             <  1:17572990/35‑1 (MQ=255)
        aCGAAGAGTTTTTCCGTGAGCGGCAGGACgctcgc                            >  1:7220507/1‑35 (MQ=255)
         cGAAGAGTTTTTCCGTGAGCGGCAGGgggggcggg                           >  1:6788090‑M1/1‑26 (MQ=255)
         cGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCt                           <  1:14137010/35‑1 (MQ=255)
         cGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCt                           <  1:10027617/35‑1 (MQ=255)
          gAAGAGTTTTTCCGTGAGCGGCAGGgggggcgggg                          >  1:1813478‑M1/1‑25 (MQ=255)
          gAAGAGTTTTTCCGTGAGCGGCAGGgggggcgcgg                          >  1:2797304‑M1/1‑25 (MQ=255)
          gAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTa                          <  1:18575610/35‑1 (MQ=255)
          gAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTa                          <  1:17464111/35‑1 (MQ=255)
          gAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTa                          <  1:16723810/35‑1 (MQ=255)
          gAAGAGTTTTTCAGTGAGAGGCAGGACGCGCGCTa                          <  1:2789332/35‑1 (MQ=37)
           aaGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTAc                         <  1:18920140/35‑1 (MQ=255)
           aaGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTAc                         <  1:5772329/35‑1 (MQ=255)
             gagTTTTTCCGTGAGCGGCAGGACGCGCGCTACgg                       <  1:10642443/35‑1 (MQ=255)
             gagTTTTTCCGTGAGCGGCAGGACGCGCGCTACgg                       <  1:4226032/35‑1 (MQ=255)
              agTTTTTCCGTGAGCGGCAGGGCGCGGGCTACGGt                      >  1:7897522/1‑35 (MQ=37)
              agTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGt                      <  1:1888216/35‑1 (MQ=255)
                tttttCCGTGAGCGGCAGGACGCGCGCTACGGTgg                    <  1:19195454/35‑1 (MQ=255)
                tttttCCGTGAGCGGCAGGACGCGCGCTACGGTgg                    <  1:12126745/35‑1 (MQ=255)
                 ttttCCGTGAGCGGCAGGACGCGCGCTACGGTGGa                   <  1:10140484/35‑1 (MQ=255)
                 ttttCCGTGAGCGGCAGGACGCGCGCTACGGTGGa                   <  1:2062459/35‑1 (MQ=255)
                   ttCCGTGAGCGGCAGGACGCGCGCTACGGTGGaaa                 <  1:5806788/35‑1 (MQ=255)
                   ttCCGTGAGCGGCAGGACGCGCGCTACGGTGGaaa                 <  1:1544544/35‑1 (MQ=255)
                    tCCGTGAGCGGCAGGACGCGCGCTACGGTGGaaaa                <  1:5009467/35‑1 (MQ=255)
                     ccGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAg               <  1:15104493/35‑1 (MQ=255)
                       gTGAGCGGCAGGACGCGCGCTACGGTGGAAAAggc             <  1:4265748/35‑1 (MQ=255)
                        tGAGCGGCAGGACGCGCGCTACGGTGGAAAAggcg            <  1:5522080/35‑1 (MQ=255)
                        tGAGCGGCAGGACGCGCGCTACGGTGGAAAAggcg            <  1:746993/35‑1 (MQ=255)
                        tGAGCGGCAGGACGCGCGCTACGGTGGAAAAggcg            <  1:12517210/35‑1 (MQ=255)
                        tGAGCGGCAGGACGCGCGCTACGGTGGAAAAggcg            <  1:9640457/35‑1 (MQ=255)
                        gtaGCGGCAGGACGCGCGCTACGGTGGAAAAggcg            <  1:1354481/33‑1 (MQ=255)
                          aGCGGCAGGACGCGCGCTACGGTGGAAAAggcggc          <  1:9742102/35‑1 (MQ=255)
                          aGCGGCAGGACGCGCGCTACGGTGGAAAAggcggc          <  1:10007827/35‑1 (MQ=255)
                          aGCGGCAGGACGCGCGCTACGGTGGAAAAggcggc          <  1:11203555/35‑1 (MQ=255)
                          aGCGGCAGGACGCGCGCTACGGTGGAAAAggcggc          <  1:15460174/35‑1 (MQ=255)
                          aGCGGCAGGACGCGCGCTACGGTGGAAAAggcggc          <  1:20191619/35‑1 (MQ=255)
                           gCGGCAGGACGCGCGCTACGGTGGAAAAGgcggcg         <  1:8877736/35‑1 (MQ=255)
                            cGGCAGGACGCGCGCTACGGTGGAAAAGGCGgcgc        <  1:11309673/35‑1 (MQ=255)
                            cGGCAGGACGCGCGCTACGGTGGAAAAGGCGgcgc        <  1:12597694/35‑1 (MQ=255)
                            cGGCAGGACGCGCGCTACGGTGGAAAAGGCGgcgc        <  1:6518515/35‑1 (MQ=255)
                            cGGCAGGACGCGCGCTACGGTGGAAAAGGCGgcgc        <  1:13226663/35‑1 (MQ=255)
                            cGGCAGGACGCGCGCTACGGTGGAAAAGGCGgcgc        <  1:768689/35‑1 (MQ=255)
                             ggCAGGACGCGCGCTACGGTGGAAAAGGCGgcgcg       <  1:15047352/35‑1 (MQ=255)
                              gCAGGACGCGCGCTACGGTGGAAAAGGCTgcgcgc      >  1:20492059/1‑35 (MQ=255)
                              gCAGGACGCGCGCTACGGTGGAAAAGGCGgcgcgc      <  1:5232162/35‑1 (MQ=255)
                               cAGGACGCGCGCTACGGTGGAAAAGGCGgcgcggg     >  1:9135018/1‑33 (MQ=255)
                               cAGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcg     >  1:1231273/1‑35 (MQ=255)
                               cAGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcg     >  1:9202142/1‑35 (MQ=255)
                                aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc    >  1:12239119/1‑35 (MQ=255)
                                aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc    >  1:15124544/1‑35 (MQ=255)
                                aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc    >  1:7185629/1‑35 (MQ=255)
                                aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc    <  1:6746850/35‑1 (MQ=255)
                                aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc    <  1:6158996/35‑1 (MQ=255)
                                aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc    <  1:6089171/35‑1 (MQ=255)
                                aGGACGCGCGCTACGGTGGAAAAGGCGgcgcgcgc    >  1:4805971/1‑35 (MQ=255)
                                 ggACGCGCGCTACGGTGGAAAAGGCGGCGCGCgct   <  1:17324661/35‑1 (MQ=255)
                                 ggACGCGCGCTACGGTGGAAAAGGCGGCGCGCgct   >  1:562532/1‑35 (MQ=255)
                                 ggACGCGCGCTACGGTGGAAAAGGCGGCGCGCgct   <  1:10814301/35‑1 (MQ=255)
                                 ggACGCGCGCTACGGTGGAAAGGCGGCGCGCgctg  <  1:1951431/35‑1 (MQ=38)
                                  gACGCGCGCTACGGTGGAAAAGGCGgctcccgccc  >  1:15334308/1‑33 (MQ=37)
                                  gACGCGCGCTACGGTGGAAAAGGCGgcgcgcgcgg  >  1:2071062/1‑33 (MQ=255)
                                  gACGCGCGCTACGGTGGAAAAGGCGGCGCGCgctg  <  1:16122736/35‑1 (MQ=255)
                                  gACGCGCGCTACGGTGGAAAAGGCGGCGCGCgctg  >  1:3519439/1‑35 (MQ=255)
                                  gACGCGCGCTACGGTGGAAAAGGCGGCGCGCgctg  <  1:4957657/35‑1 (MQ=255)
                                  gACGCGCGCTACGGTGGAAAAGGCGGCGCGCgctg  >  1:9513910/1‑35 (MQ=255)
                                  |                                  
GATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTG  >  REL606/615001‑615069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.