New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 4187069 | 83 (0.810) | 13 (0.170) | 5/36 | NT | 15.8% | coding (49/1590 nt) | purH | bifunctionalphosphoribosylaminoimidazolecarboxam ide formyltransferase/IMP cyclohydrolase |
? | REL606 | = 4402608 | 76 (0.990) | intergenic (+67/+62) | sgaE/yjfY | L‑ribulose 5‑phosphate 4‑epimerase/hypothetical protein |
Only 100 of 189 total aligned reads displayed.
ATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAGCCCCCTGAGAAGGGGGCAAAGCAAACTATG > REL606/4402575‑4402642 | aTAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAa < 1:9854235‑M2/35‑2 (MQ=255) aTAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAa > 1:10444375‑M2/1‑34 (MQ=255) tAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAaa < 1:1384223‑M2/35‑3 (MQ=255) tAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAaa < 1:18424991‑M2/35‑3 (MQ=255) tAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAaa < 1:15890470‑M2/35‑3 (MQ=255) aaCTGGTCTAATTCCGCAGCCGTTTTTCAAAAaaa < 1:14907281‑M2/35‑4 (MQ=255) aaCTGGTCTAATTCCGCAGCCGTTTTTCAAAAaaa < 1:14352927‑M2/35‑4 (MQ=255) aCTGGTCTAATTCCGCAGCCGTTTTTCAAAAaaag < 1:14662376‑M2/35‑5 (MQ=255) cTGGTCTAATTCCGCAGCCGTTTTTCAAAAaaagc < 1:7614877‑M2/35‑6 (MQ=255) cTGGTCTAATTCCGCAGCCGTTTTTCAAAAaaagc < 1:5822437‑M2/35‑6 (MQ=255) cTGGTCTAATTCCGCAGCCGTTTTTCAAAAaaagc < 1:19076849‑M2/35‑6 (MQ=255) tgttCTAATCCCCCAGCCGTTTTTCAAAAAAAGcc < 1:17679112/32‑1 (MQ=25) tGGTCTAATTCCGCAGCCGTTTTTCAAAAaaagcc < 1:1924920‑M2/35‑7 (MQ=255) ggTCTAATTCCGCAGCCGTTTTTCAAAAAAAGccc > 1:17769494/1‑35 (MQ=255) ggTCTAATTCCGCAGCCGTTTTTCAAAAAAAGccc > 1:4867013/1‑35 (MQ=255) ggTCTAATCCCGCAGCCGTTTTTCAAAAAAAGccc < 1:2820633/35‑1 (MQ=255) ttCTAATCCCCCAGCCGTTTTTCAAAAAAAGcccc < 1:4773708/34‑1 (MQ=37) gTCTAATTCCGCAGCCGTTTTTCAAAAAAAGcccc > 1:8637892/1‑35 (MQ=255) tCTACTCCCGCAGCCGTTTTTCAAAAAAAGccccc < 1:498115/35‑1 (MQ=37) tCTAATTCCGCAGCCGTTTTTCAAAAAAAGccccc > 1:3832170/1‑35 (MQ=255) tCTAATTCCGCAGCCGTTTTTCAAAAAAAGccccc < 1:4162854/35‑1 (MQ=255) tCTAATTCCGCAGCCGTTTTTCAAAAAAAGccccc > 1:4354188/1‑35 (MQ=255) tCTAATTCCGCAGCCGTTTTTCAAAAAAAGccccc > 1:12253143/1‑35 (MQ=255) tCTAATTCCGCAGCCGTTTTTCAAAAAAAGccccc > 1:615567/1‑35 (MQ=255) tCTAATTCCGCAGCCGTTTTTCAAAAAAAGccccc > 1:6696688/1‑35 (MQ=255) tCTAATCCCGCAGCCGTTTTTCAAAAAAAGccccc < 1:10008638/35‑1 (MQ=255) cTAATTCCCCAGCCGTTTTTCAAAAAAAGCCCCCt < 1:6415707/35‑1 (MQ=255) tAATTCCGCAGCCGTTTTTCAAAAAAAGCCCCCTg < 1:20079792/35‑1 (MQ=255) tAATTCCGCAGCCGTTTTTCAAAAAAAGCCCCCTg < 1:20549140/35‑1 (MQ=255) tAATTCCGCAGCCGTTTTTCAAAAAAAGCCCCCTg < 1:9914983/35‑1 (MQ=255) tAATTCCGCAGCCGTTTTTCAAAAAAAGCCCCCTg > 1:16386822/1‑35 (MQ=255) tAATTCCGCAGCCGTTTTTCAAAAAAAGCCCCCTg > 1:11962330/1‑35 (MQ=255) tAATCCCGCAGCCGTTTTTCAAAAAAAGCCCCCTg < 1:11377132/35‑1 (MQ=255) tAATCCCGCAGCCGTTTTTCAAAAAAAGCCCCCTg < 1:14097084/35‑1 (MQ=255) tAATCCCGCAGCCGTTTTTCAAAAAAAGCCCCCTg < 1:14486305/35‑1 (MQ=255) ttCCGCAGCCGTTTTTCAAAAAAAGCCCCCTgaga > 1:17632872/1‑35 (MQ=255) ttCCGCAGCCGTTTTTCAAAAAAAGCCCCCTgaga > 1:18601265/1‑35 (MQ=255) tcccGCAGCCGTTTTTCAAAAAAAGCCCCCTgaga < 1:16108480/33‑1 (MQ=255) tCCGCAGCCGTTTTTCAAAAAAAGCCCCCTGAGaa > 1:10367614/1‑35 (MQ=255) ccGCAGCCGTTTTTCAAAAAAAGCCCCCTGAGAAg < 1:3705627/35‑1 (MQ=255) cGCAGCCGTTTTTCAAAAAAAGCCCCCTGAGAAgg < 1:2100307/35‑1 (MQ=255) gCAGCCGTTTTTCAAAAAAAGCCCCCTGAGAAggg > 1:19718711/1‑35 (MQ=255) gCAGCCGTTTTTCAAAAAAAGCCCCCTGAGAAggg > 1:1094459/1‑35 (MQ=255) gCAGCCGTTTTTC‑‑AAAAAGCCCCCTGAGAAggggg < 1:11419772/35‑1 (MQ=25) cAGCCGTTTTTCAAAAAAAGCCCCCTGAGAAgggg < 1:9455283/35‑1 (MQ=255) cAGCCGTTTTTCAAAAAAAGCCCCCTGAGAAgggg > 1:18902813/1‑35 (MQ=255) aGCCGTTTTTCAAAAAAAGCCCCCTGAGAAggggg > 1:18813385/1‑35 (MQ=255) tgagtttTTCAAAAaaagccggtatcgtcgaattc > 1:17985605‑M2/4‑14 (MQ=255) gCCGTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgc > 1:2470126/1‑35 (MQ=255) gCCGTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgc > 1:2180228/1‑35 (MQ=255) cggttTTTCAAAAaaagccggtatcgtcgaattcg > 1:17311248‑M2/3‑13 (MQ=255) ccGTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgca < 1:11480998/35‑1 (MQ=255) ccGTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgca > 1:5465172/1‑35 (MQ=255) ccGTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgca > 1:7684405/1‑35 (MQ=255) cGTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgcaa < 1:8049092/35‑1 (MQ=255) ttttttcTAAAaaagccggtatcgtcgaattcgcc > 1:19478113‑M2/2‑11 (MQ=255) ttttttcGAAAaaagccggtatcgtcgaattcgcc > 1:10131480‑M2/2‑11 (MQ=255) gTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgcaaa > 1:10804595/1‑35 (MQ=255) gTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgcaaa < 1:17446754/35‑1 (MQ=255) gTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgcaaa < 1:15522758/35‑1 (MQ=255) gTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgcaaa > 1:267133/1‑35 (MQ=255) gTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgcaaa > 1:11414628/1‑35 (MQ=255) gTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgcaaa < 1:9674504/35‑1 (MQ=255) gTTTTTCAAAAAAAGCCCCCTGAGAAGGGGgcaaa > 1:12662177/1‑35 (MQ=255) tttttCAAAAaaagccggtatcgtcgaattcgccc > 1:5182341‑M2/1‑10 (MQ=255) tttttCAAAAAAAGCCCCCTGAGAAGGGGgcaaag < 1:5739570/35‑1 (MQ=255) tttttCAAAAAAAGCCCCCTGAGAAGGGGgcaaag > 1:15178720/1‑35 (MQ=255) tttttCAAAAAAAGCCCCCTGAGAAGGGGgcaaag > 1:18880100/1‑35 (MQ=255) tttttCAAAAAAAGCCCCCTGAGAAGGGGgcaaag < 1:15935435/35‑1 (MQ=255) tttttCAAAAAAAGCCCCCTGAGAAGGGGgaaaag < 1:10509976/35‑1 (MQ=255) ttttCAAAAaaagccggtatcgtcgaattcgccca > 1:16634873‑M2/1‑9 (MQ=255) ttttCAAAAAAAGCCCCCTGAGAAGGGGgcaaagc < 1:7226702/35‑1 (MQ=255) ttttCAAAAAAAGCCCCCTGAGAAGGGGgcaaagc > 1:6253078/1‑35 (MQ=255) ttttCAAAAAAAGCCCCCTGAGAAGGGGgcaaagc < 1:15682003/35‑1 (MQ=255) gtttcTAAAaaagccggtatcgtcgaattcgccca > 1:13407386‑M2/2‑9 (MQ=255) tttCAAAAaaagccggtatcgtcgaattcgcccag > 1:12905056‑M2/1‑8 (MQ=255) tttCAAAAAAAGCCCCCTGAGAAGGGGgcaaagca > 1:8409843/1‑35 (MQ=255) tttCAAAAAAAGCCCCCTAAGAAGGGGgcaaagca < 1:596336/35‑1 (MQ=255) ttCTAAAaaagccggtatcgtcgaattcgcccagg > 1:6114756‑M2/1‑7 (MQ=255) ttCAAAAaaagccggtatcgtcgaattcgcccagg > 1:7917367‑M2/1‑7 (MQ=255) ttCAAAAAAAGCCCCCTGAGAAGGGGgcaaagcaa < 1:20460141/35‑1 (MQ=255) tgtaaaaaagccggtatcgtcgaattcgcccaggc > 1:7788883‑M2/4‑6 (MQ=255) tCAAAAAAAGCCCCCTGAGAAGGGGgcaaagcaaa < 1:20358497/35‑1 (MQ=255) tCAAAAAAAGCCCCCTGAGAAGGGGgcaaagcaaa < 1:19775248/35‑1 (MQ=255) cAAAAAAAGCCCCCTGAGAAGGGGGCAAAGCAAAc < 1:334428/35‑1 (MQ=255) cAAAAAAAGCCCCCTGAGAAGGGGGCAAAGCAAAc < 1:8352484/35‑1 (MQ=255) aaaaaaaaGCCCCCTGAGAAGGGGGCAAAGCAAAc < 1:16803081/34‑1 (MQ=255) aaaaaaaGCCCCCTGAGAAGGGGGCAAAGCAAACt > 1:8681570/1‑35 (MQ=255) aaaaaaaGCCCCCTGAGAAGGGGGCAAAGCAAACt < 1:15458187/35‑1 (MQ=255) aaaaaaaGCCCCCTGAGAAGGGGGCAAAGCAAACt < 1:13243266/35‑1 (MQ=255) aaaaaaaGCCCCCTGAGAAGGGGGCAAAGCAAACt > 1:13758521/1‑35 (MQ=255) aaaaaaaGCCCCCTGAGAAGGGGGCAAAGCAAACt > 1:3577921/1‑35 (MQ=255) aaaaaaaGCCCCCTGAGAAGGGGGCAAAGCAAACt > 1:13710942/1‑35 (MQ=255) aaaaaaGCCCCCTGAGAAGGGTGCAAAGCAAACTa > 1:6314123/1‑35 (MQ=255) aaaaaaGCCCCCTGAGAAGGGGGCAAAGCAAACTa > 1:6860891/1‑35 (MQ=255) aaaaaGCCCCCTGAGAAGGGGGCAAAGCAAACTAt < 1:1108621/35‑1 (MQ=255) aaaagccggtatcgtcgaattcgcccaggcacttt > 1:6076953‑M2/1‑1 (MQ=255) aaaaGCCCCCTGAGAAGGGGGCAAAGCAAACTATg < 1:19005865/35‑1 (MQ=255) aaaaGCCCCCTGAGAAGGGGGCAAAGCAAACTATg < 1:3923509/35‑1 (MQ=255) aaaaGCCCCCTGAGAAGGGGGCAAAGCAAACTATg < 1:3433752/35‑1 (MQ=255) | ATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAGCCCCCTGAGAAGGGGGCAAAGCAAACTATG > REL606/4402575‑4402642 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |