New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2966042 = | 52 (0.510) | 5 (0.060) | 3/36 | NT | 9.1% | coding (1345/1992 nt) | tktA | transketolase 1, thiamin‑binding |
? | REL606 | 3780481 = | 61 (0.790) | coding (513/1359 nt) | ECB_03520 | conserved hypothetical protein |
ATGTTCGTGGAATACGCACGTAACGCCGTACGTATGGCTG‑‑‑‑‑‑‑‑ < REL606/2966081‑2966042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgGGCGGGTG > REL606/3780481‑3780488 ATGTTCGTGGAATACGCACGTAACGCCGTACGTAT > 1:19907610/1‑35 ATGTTCGTGGAATACGCACGTAACGCCGTACGTAT > 1:6852265/1‑35 ATGTTCGTGGAATACGCACGTAACGCCGTACGTAT > 1:19763910/1‑35 ATGTTCGTGGAATACGCACGTAACGCCGTACGTAT < 1:7301196/35‑1 ATGTTCGTGGAATACGAACGTAACGCCGTACGTAT < 1:19896304/35‑1 TGTTCGTGGAATACGCACGTAACGCCGTACGTCTG > 1:6249314/1‑35 TGTTCGTGGAATACGCACGTAACGCCGTACGTATG < 1:408207/35‑1 TGTTCGTGGAATACGCACGTAACGCCGTACGTATG > 1:425503/1‑35 TGTTCGTGGAATACGCACGTAACGCCGTACGTATG < 1:3242349/35‑1 TGTTCGTGGAATACGCACGTAACGCCGTACGTATG < 1:12616366/35‑1 TGTTCGTGGAATACGCACGTAACGCCGTACGTATG < 1:12139645/35‑1 TGTTCGTGGAATACGCACGTAACGCCGTACGTATG < 1:1115577/35‑1 TGTTCGTGGAATACGCACGTAACGCCGTACGTATG > 1:18372197/1‑35 TGTTCGTGGAATACGCACGTAACGCCGTACGTATG < 1:10606707/35‑1 GTTCGTGGAATACGCACGTAACGCCGTACGTATGG > 1:19505476/1‑35 GTTCGTGGAATACGCACGTAACGCCGTACGTATGG > 1:19195993/1‑35 GTTCGTGGAATACGCACGTAACGCCGTACGTATGG > 1:18492670/1‑35 GTTCGTGGAATACGCACGTAACGCCGTACGTATGG < 1:428577/35‑1 GTTCGTGGAATACGCACGTAACGCCGTACGTATGG > 1:5558254/1‑35 GTTCGTGGAATACGCACGTAACGCCGTACGTATGG > 1:1402760/1‑35 GTTCGTGGAATACGCACGTAACGCCGTACGTATGG < 1:8013778/35‑1 GTTCGTGGAATACGCACGTAACGCCGTACGTATGG > 1:10923056/1‑35 TTCGTGGAATACGCACGTAACGCCGTACGTATGGC > 1:20101600/1‑35 TTCGTGGAATACGCACGTAACGCCGTACGTATGGC < 1:8039084/35‑1 TTCGTGGAATACGCACGTAACGCCGTACGTATGGC < 1:8368471/35‑1 TTCGTGGAATACGCACGTAACGCCGTACGTATGGC > 1:9066311/1‑35 TTCGTGGAATACGCACGTAACGCCGTACGTATGGC < 1:14590324/35‑1 TCGTGGAATACGCACGTAACGCCGTACTTATGGCT > 1:8614774/1‑35 TCGTGGAATACGCACGTAACGCCGTACGTATGGCT < 1:10796115/35‑1 TCGTGGAATACGCACGTAACGCCGTACGTATGGCT > 1:11923494/1‑35 TCGTGGAATACGCACGTAACGCCGTACGTATGGCT > 1:12281573/1‑35 TCGTGGAATACGCACGTAACGCCGTACGTATGGCT < 1:6537307/35‑1 TCGTGGAATACGCACGTAACGCCGTACGTATGGCT < 1:2437809/35‑1 TCGTGGAATACGCACGTAACGCCGTACGTATGGCT < 1:16611350/35‑1 CGTGGAATACGCACGTAATGCCGTACGTATGGCTG > 1:5108752/1‑35 CGTGGAATACGCACGTAACGCCGTACGTATGGCTG > 1:10560517/1‑35 CGTGGAATACGCACGTAACGCCGTACGTATGGCTG > 1:341619/1‑35 CGTGGAATACGCACGTAACGCCGTACGTATGGCTG > 1:18348798/1‑35 CGTGGAATACGCACGTAACGCCGTACGTATGGCTG < 1:19745111/35‑1 CGTGGAATACGCACGTAACGCCGTACGTATGGCTG > 1:17515025/1‑35 CGTGGAATACGCACGTAACGCCGTACGTATGGCTG > 1:2863671/1‑35 CGTGGAATACGCACGTAACGCCGTACGTATGGCTG < 1:16919270/35‑1 GTGGAATACGCACGTAACGCCGTACGTATGGCTGG > 1:7099526/1‑35 GTGGAATACGCACGTAACGCCGTACGTATGGCTGG > 1:6757410/1‑35 GTGGAATACGCACGTAACGCCGTACGTATGGCTGG > 1:13892638/1‑35 TGGAATACGCACGTAACGCCGTACGTATGGCTGtg > 1:1676022/1‑33 TGGAATACGCACGTAACGCCGTACGTATGGCTGGG > 1:17471403/1‑35 GGAATACGCACGTAACGCCGTACGTATGGCTGGGg > 1:435021/1‑34 GGAATACGCACGTAACGCCGTACGTATGGCTGGGg > 1:13202272/1‑34 GGAATACGCACGTAACGCCGTACGTATGGCTGGGg > 1:3906031/1‑34 GGAATACGCACGTAACGCCGTACGTATGGCTGGGg > 1:17720632/1‑34 GGAATACGCACGTAACGCCGTACGTATGGCTGGGC > 1:2392042/1‑35 GAATACGCACGTAACGCCGTACGTATGGCTGGGgg > 1:7525857/1‑33 AATACGCACGTAACGCCGTACGTATGGCTGGGCtg > 1:14382618/1‑33 ATACGCACGTAACGCCGTACGTATGGCTGGGGGGG > 1:17395078/1‑35 ATACGCACGTAACGCCGTACGTATGGCTGGGGGGG > 1:13720576/1‑35 ATACGCACGTAACGCCGTACGTATGGCTGGGGGGG > 1:15946502/1‑35 TACGCACGTAACGCCGTACGTATGGCTGGGCGGGT > 1:5911866/1‑35 ACGCACGTAACGCCGTACGTATGGCTGGGCGGGTG > 1:375243/1‑35 ATGTTCGTGGAATACGCACGTAACGCCGTACGTATGGCTG‑‑‑‑‑‑‑‑ < REL606/2966081‑2966042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgGGCGGGTG > REL606/3780481‑3780488 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |