Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | REL606 | 4,431,394 | Δ2 bp | 100% | coding (3526‑3527/3780 nt) | ytfN → | hypothetical protein |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 4,431,394 | 0 | G→. | 100.0% | 383.7 | 99 | coding (3526/3780 nt) | ytfN | hypothetical protein |
Reads supporting (aligned to +/- strand): new base (54/45): ref base (0/0): total (54/45) | ||||||||||
* | REL606 | 4,431,395 | 0 | G→. | 100.0% | 383.7 | 99 | coding (3527/3780 nt) | ytfN | hypothetical protein |
Reads supporting (aligned to +/- strand): new base (54/45): ref base (0/0): total (54/45) |
CTGATTGGTCTGGGGGTTGCGCAAAGTGGCCAGATTGTGGGTAAAATCGGCGAGA > REL606/4431367‑4431421 || cTGATTGGTCTTGGGGTTGCGCAAAGT‑‑CCAGATtg > 1:5315684/1‑35 (MQ=21) cTGATTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATtg < 1:8728084/35‑1 (MQ=25) cTGATTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATtg < 1:5178392/35‑1 (MQ=25) tGATTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATtgt > 1:19666791/1‑35 (MQ=25) tGATTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATtgt > 1:19928011/1‑35 (MQ=25) tGATTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATtgt < 1:11357159/35‑1 (MQ=25) tGATTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATtgt < 1:599654/35‑1 (MQ=25) tGATTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATtgt > 1:6503701/1‑35 (MQ=25) tGATTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATtgt < 1:10092799/35‑1 (MQ=25) gATTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATtgtg > 1:11204192/1‑35 (MQ=25) gATTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATtgtg < 1:6980538/35‑1 (MQ=25) gATTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATtgtg < 1:7710269/35‑1 (MQ=25) aTTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTgg > 1:2639539/1‑35 (MQ=37) aTTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTgg < 1:2072873/35‑1 (MQ=37) aTTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTgg < 1:9955963/35‑1 (MQ=37) aTTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTgg > 1:14448608/1‑35 (MQ=37) aTTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTgg > 1:13998276/1‑35 (MQ=37) aTTGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTgg < 1:13138957/35‑1 (MQ=37) ttGGTCTGGGGGTTGCTCAAAGT‑‑CCAGATTGTggg > 1:15623787/1‑35 (MQ=21) ttGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTggg > 1:13981340/1‑35 (MQ=37) ttGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTggg > 1:14550241/1‑35 (MQ=37) ttGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTggg > 1:5733482/1‑35 (MQ=37) ttGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTggg < 1:35828/35‑1 (MQ=37) ttGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTggg > 1:19505774/1‑35 (MQ=37) tGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGt < 1:10146783/35‑1 (MQ=37) tGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGt < 1:6815252/35‑1 (MQ=37) tGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGt < 1:1953877/35‑1 (MQ=37) tGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGt > 1:19263893/1‑35 (MQ=37) tGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGt < 1:19208374/35‑1 (MQ=37) tGGTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGt > 1:1594129/1‑35 (MQ=37) ggTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTa > 1:13970729/1‑35 (MQ=37) ggTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTa < 1:603152/35‑1 (MQ=37) ggTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTa > 1:12977825/1‑35 (MQ=37) ggTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTa < 1:20483425/35‑1 (MQ=37) ggTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTa > 1:19905686/1‑35 (MQ=37) ggTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTa > 1:19087673/1‑35 (MQ=37) ggTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTa > 1:18809400/1‑35 (MQ=37) ggTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTa > 1:16017564/1‑35 (MQ=37) gTCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaa < 1:18412317/35‑1 (MQ=37) tCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaa > 1:11299637/1‑35 (MQ=37) tCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaa < 1:371669/35‑1 (MQ=37) tCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaa > 1:2694289/1‑35 (MQ=37) tCTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaa > 1:19856924/1‑35 (MQ=37) cTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTgaaa < 1:11762137/35‑1 (MQ=21) cTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaaa < 1:9307467/35‑1 (MQ=37) cTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaaa > 1:9224584/1‑35 (MQ=37) cTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaaa < 1:9123804/35‑1 (MQ=37) cTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaaa > 1:10498960/1‑35 (MQ=37) cTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaaa > 1:4530498/1‑35 (MQ=37) cTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaaa > 1:4492831/1‑35 (MQ=37) cTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaaa > 1:401730/1‑35 (MQ=37) cTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaaa > 1:3887755/1‑35 (MQ=37) cTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaaa > 1:16692060/1‑35 (MQ=37) cTGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTaaaa > 1:17518954/1‑35 (MQ=37) tGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAAt < 1:16270069/35‑1 (MQ=37) tGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAAt < 1:7559834/35‑1 (MQ=37) tGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAAt < 1:19836055/35‑1 (MQ=37) tGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAAt < 1:839436/35‑1 (MQ=37) tGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAAt < 1:20535127/35‑1 (MQ=37) tGGGGGTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAAt < 1:16684367/35‑1 (MQ=37) gggggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATc < 1:16426046/35‑1 (MQ=37) gggggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATc > 1:4512057/1‑35 (MQ=37) ggggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATct > 1:2391197/1‑34 (MQ=25) ggggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCg < 1:19827342/35‑1 (MQ=37) ggggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCg < 1:10426929/35‑1 (MQ=37) ggggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCg < 1:549571/35‑1 (MQ=37) ggggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCg < 1:9350767/35‑1 (MQ=37) ggggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCg < 1:15805189/35‑1 (MQ=37) gggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCgg > 1:12401207/1‑35 (MQ=37) gggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCgg < 1:8107559/35‑1 (MQ=37) gggTTGCGCAAAGT‑‑CCAGATTGCGGGCAAAATCgg > 1:5823539/1‑35 (MQ=12) ggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGc > 1:1895946/1‑35 (MQ=37) ggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGc > 1:4438029/1‑35 (MQ=37) ggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGc > 1:8493895/1‑35 (MQ=37) ggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGc > 1:19912437/1‑35 (MQ=37) ggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGc < 1:11159771/35‑1 (MQ=37) ggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGc < 1:18119721/35‑1 (MQ=37) ggTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGc > 1:10546081/1‑35 (MQ=37) gTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCg > 1:1904746/1‑35 (MQ=37) gTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCg > 1:896110/1‑35 (MQ=37) gTTGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCg > 1:413839/1‑35 (MQ=37) gTTGCGCAAAGT‑‑CCAGATTGTAGGTAAAATCGGCg < 1:1827203/35‑1 (MQ=25) ttGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCga < 1:13787425/35‑1 (MQ=25) ttGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCga < 1:19790238/35‑1 (MQ=25) ttGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCga > 1:18834879/1‑35 (MQ=25) ttGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCga > 1:14849930/1‑35 (MQ=25) ttGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCga > 1:15934479/1‑35 (MQ=25) tGCGCAAAGT‑‑CCATATTGTGGGTAAAATCGGCgag > 1:1496552/1‑35 (MQ=21) tGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCTGCgag > 1:935081/1‑35 (MQ=21) tGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCgag < 1:15803196/35‑1 (MQ=25) tGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCgag > 1:8291312/1‑35 (MQ=25) tGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCgag < 1:2581461/35‑1 (MQ=25) tGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCgag < 1:12981539/35‑1 (MQ=25) tGCGCAAAGT‑‑CCAGATTGTGGGTAAAATCGGCgag < 1:9153138/35‑1 (MQ=25) gcgcAAAGT‑‑CCAGATTGTGGGTAAAATCGGCgaga > 1:9315123/1‑35 (MQ=25) gcgcAAAGT‑‑CCAGATTGTGGGTAAAATCGGCgaga > 1:7917902/1‑35 (MQ=25) gcgcAAAGT‑‑CCAGATTGTGGGTAAAATCGGCgaga > 1:10447330/1‑35 (MQ=25) gcgcAAAGT‑‑CCAGATTGTGGGTAAAATCGGCgaga > 1:5952026/1‑35 (MQ=25) gcgcAAAGT‑‑CCAGATTGTGGGTAAAATCGGCgaga < 1:4297270/35‑1 (MQ=25) gcgcAAAGT‑‑CCAGATTGTGGGTAAAATCGGCgaga > 1:1590066/1‑35 (MQ=25) || CTGATTGGTCTGGGGGTTGCGCAAAGTGGCCAGATTGTGGGTAAAATCGGCGAGA > REL606/4431367‑4431421 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |