New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1349559 = | 56 (0.540) | 6 (0.060) | 3/46 | NT | 8.3% | intergenic (‑151/+217) | fabI/ycjD | enoyl‑(acyl carrier protein) reductase/hypothetical protein |
? | REL606 | = 2307173 | 79 (0.800) | coding (767/1218 nt) | yfaW | predicted enolase |
AAAGCGCCCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1349571‑1349559 ‑‑‑‑‑‑‑‑‑‑‑‑cCGCCACAGCAGTATGAAAGTTATCGCGAACTGAA < REL606/2307173‑2307140 AAAGCGCCCCCCCCGCCACAGCAGTATGAAAGTTA < 1:8404970/35‑1 aggGCCCCCCCCGCCACAGCAGTATGAAAGTTATC < 1:8476097/32‑1 AGCGCCCCCCCCGCCACAGCAGTATGAAAGTTATC < 1:3508480/35‑1 ggtCCCCCCCCGCCACAGCAGTATGAAAGTTATCG < 1:17152807/32‑1 gaGCCCCCCCCGCCACAGCAGTATGAAAGTTATCG < 1:19680195/33‑1 GCCCCCCCCGCCACAGCAGTATGAAAGTTATCGCG < 1:11827569/35‑1 tCCCCCCCGCCACAGCAGTATGAAAGTTATCGCGA < 1:4298799/34‑1 CCCTCCCGCCACAGCAGTATGAAAGTTATCGCGAA < 1:7637761/35‑1 CCCCCCCGCCACAGCAGTATGAAAGTTATCGCGAA < 1:14931248/35‑1 CCCCCCCGCCACAGCAGTATGAAAGTTATCGCGAA < 1:11627311/35‑1 CCCCCGCCACAGCAGTATGAAAGTTATCGCGAACT < 1:15426573/35‑1 CCCCCGCCACAGCAGTATGAAAGTTATCGCGAACT < 1:13597784/35‑1 CCCCGCCACAGCAGTATGAAAGTTATCGCGAACTG < 1:17416080/35‑1 CCCCGCCACAGCAGTATGAAAGTTATCGCGAACTG < 1:13914300/35‑1 CCCGCCACAGCAGTATGAAAGTTATCGCGAACTGA < 1:3650089/35‑1 CCCGCCACAGCAGTATGAAAGTTATCGCGAACTGA < 1:7510409/35‑1 CCGCCACAGCAGTATGAAAGTTATCGCGAACTGAA > 1:19508312/1‑35 CCGCCACAGCAGTATGAAAGTTATCGCGAACTGAA > 1:19827536/1‑35 CCGCCACAGCAGTATGAAAGTTATCGCGAACTGAA > 1:7694183/1‑35 CCGCCACAGCAGTATGAAAGTTATCGCGAACTGAA > 1:7971881/1‑35 AAAGCGCCCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1349571‑1349559 ‑‑‑‑‑‑‑‑‑‑‑‑cCGCCACAGCAGTATGAAAGTTATCGCGAACTGAA < REL606/2307173‑2307140 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |