New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3820609 = | 84 (0.820) | 7 (0.100) | 3/34 | NT | 12.1% | coding (425/924 nt) | yidL | predicted DNA‑binding transcriptional regulator |
? | REL606 | = 4248913 | 42 (0.580) | coding (568/714 nt) | aphA | acid phosphatase/phosphotransferase, class B, non‑specific |
Only 100 of 154 total aligned reads displayed.
GATATTCCCGTTGGTCAGCAAAGCGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACTGAAGTT > REL606/3820575‑3820643 | gATATTCCCGTTGGTCAGCAAAGCGTTATTTATaa > 1:16388406/1‑35 (MQ=255) gATATTCCCGTTGGTCAGCAAAGCGTTATTTATaa < 1:16028562/35‑1 (MQ=255) caatggctgcaggataaaaatatccgaatttttta > 1:10258965‑M1/35‑35 (MQ=255) atatTCTCGTTGGTCAGCAAAGCGTTATTTATAAt > 1:613868/1‑35 (MQ=255) atatTCCCGTTGGTCAGCAAAGCGTTATTTATAAt < 1:8013350/35‑1 (MQ=255) atatTCCCGTTGGTCAGCAAAGCGTTATTTATAAt < 1:11322215/35‑1 (MQ=255) atatTCCCGTTGGTCAGCAAAGCGTTATTTATAAt > 1:20609167/1‑35 (MQ=255) atatTCCCGTTGGTCAGCAAAGCGTTATTTATAAt < 1:8443632/35‑1 (MQ=255) aatggctgcaggataaaaatatccgaattttttAt > 1:7770036‑M1/34‑35 (MQ=255) attgctgcaggataaaaatatccgaattttttATg < 1:16605262‑M1/3‑1 (MQ=255) atggctgcaggataaaaatatccgaattttttATg > 1:1594552‑M1/33‑35 (MQ=255) atggctgcaggataaaaatatccgaattttttATg > 1:3752440‑M1/33‑35 (MQ=255) tggctgcaggataaaaatatccgaattttttATgg < 1:10018677‑M1/4‑1 (MQ=255) tggctgcaggataaaaatatccgaattttttATgg < 1:18581216‑M1/4‑1 (MQ=255) tggctgcaggataaaaatatccgaattttttATgg < 1:9399895‑M1/4‑1 (MQ=255) atTCCCGTTGGTCAGCAAAGCGTTATTTATAATgg < 1:959807/35‑1 (MQ=255) atTCCCGTTGGTCAGCAAAGCGTTATTTATAATgg > 1:10823029/1‑35 (MQ=255) atTCCCGTTGGTCAGCAAAGCGTTATTTATAATgg < 1:5869721/35‑1 (MQ=255) atTCCCGTTGGTCAGCAAAGCGTTATTTATAATgg > 1:5656221/1‑35 (MQ=255) ggctgcaggataaaaatatccgaattttttATGGc > 1:1973674‑M1/31‑35 (MQ=255) ggctgcaggataaaaatatccgaattttttATGGc > 1:15086578‑M1/31‑35 (MQ=255) tCCCGTTGGTCAGCAAAGCGTTATTTATAATGGCg < 1:12137887/35‑1 (MQ=255) tCCCGTTGGTCAGCAAAGCGTTATTTATAATGGCg > 1:19284055/1‑35 (MQ=255) gctgcaggataaaaatatccgaattttttATGGCg > 1:14941281‑M1/30‑35 (MQ=255) gctgcaggataaaaatatccgaattttttATGGCg > 1:3972729‑M1/30‑35 (MQ=255) ctgcaggataaaaatatccgaattttttATGGCGa < 1:7842982‑M1/7‑1 (MQ=255) ctgcaggataaaaatatccgaattttttATGGCGa > 1:17078098‑M1/29‑35 (MQ=255) ctgcaggataaaaatatccgaattttttATGGCGa < 1:17392060‑M1/7‑1 (MQ=255) cccGTTGGTCAGCAAAGCGTTATTTATAATGGCGa > 1:19633937/1‑35 (MQ=255) tgcaggataaaaatatccgaattttttATGGCgac < 1:9471682‑M1/8‑2 (MQ=255) tgcaggataaaaatatccgaattttttATGGCGaa < 1:19507092‑M1/8‑1 (MQ=255) tgcaggataaaaatatccgaattttttATGGCGaa < 1:14047611‑M1/8‑1 (MQ=255) ccGTTGGTCAGCAAAGCGTTATTTATAATGGCGaa > 1:6445416/1‑35 (MQ=255) ccGTTGGTCAGCAAAGCGTTATTTATAATGGCGaa < 1:7932042/35‑1 (MQ=255) cGTTGGTCAGCAAAGCGTTATTTATAATGGCGaaa > 1:7697343/1‑35 (MQ=255) cGTTGGTCAGCAAAGCGTTATTTATAATGGCGaaa < 1:467025/35‑1 (MQ=255) gTTGGTCAGCAAAGCGTTATTTATAATGGCGAAAt < 1:5056420/35‑1 (MQ=255) gTTGGTCAGCAAAGCGTTATTTATAATGGCGAAAt < 1:17116127/35‑1 (MQ=255) gTTGGTCAGCAAAGCGTTATTTATAATGGCGAAAt < 1:8890668/35‑1 (MQ=255) caggataaaaatatccgaattttttATGGCGAAAt < 1:838534‑M1/10‑1 (MQ=255) tGGTCAGCAAAGCGTTATTTATAATGGCGAAAttt < 1:1817587/35‑1 (MQ=255) tGGTCAGCAAAGCGTTATTTATAATGGCGAAAttt > 1:15542330/1‑35 (MQ=255) tGGTCAGCAAAGCGTTATTTATAATGGCGAAAttt > 1:5801984/1‑35 (MQ=255) ggTCAGCAAAGCGTTATTTATAATGGCGAAATTta > 1:16710490/1‑35 (MQ=255) gTCAGCAAAGCGTTATTTATAATGGCGAAATTtat < 1:4894977/35‑1 (MQ=255) gTCAGCAAAGCGTTATTTATAATGGCGAAATTtat < 1:11536275/35‑1 (MQ=255) gTCAGCAAAGCGTTATTTATAATGGCGAAATTtat < 1:9350590/35‑1 (MQ=255) gTCAGCAAAGCGTTATTTATAATGGCGAAATTtat < 1:8665292/35‑1 (MQ=255) ataaaaatatccgaattttttATGGCGAAAAttaa < 1:14252996‑M1/14‑2 (MQ=255) taaaaatatccgaattttttATGGCGAAAATtata < 1:7664345‑M1/15‑1 (MQ=255) cAGCAAAGCGTTATTTATAATGGCGAAATTTATaa < 1:20031900/35‑1 (MQ=255) cAGCAAAGCGTTATTTATAATGGCGAAATTTATaa > 1:3823556/1‑35 (MQ=255) cAGCAAAGCGTTATTTATAATGGCGAAATTTATaa > 1:2852009/1‑35 (MQ=255) aaaatatccgaattttttATGGCGAAAATTATAAt < 1:5475791‑M1/17‑1 (MQ=255) aaaatatccgaattttttATGGCGAAAATTATAAt < 1:13713380‑M1/17‑1 (MQ=255) aGCAAAGCGTTATTTATAATGGCGAAATTTATAAt < 1:151249/35‑1 (MQ=255) aGCAAAGCGTTATTTATAATGGCGAAATTTATAAt > 1:20331013/1‑35 (MQ=255) aGCAAAGCGTTATTTATAATGGCGAAATTTATAAt < 1:19873996/35‑1 (MQ=255) gCAAAGCGTTATTTATAATGGCGAAATTTATAATc > 1:2511518/1‑35 (MQ=255) gCAAAGCGTTATTTATAATGGCGAAATTTATAATc < 1:14719458/35‑1 (MQ=255) gCAAAGCGTTATTTATAATGGCGAAATTTATAATc > 1:2329366/1‑35 (MQ=255) gCAAAGCGTTATTTATAATGGCGAAATTTATAATc < 1:7235384/35‑1 (MQ=255) aaatatccgaattttttATGGCGAAACTTATAatt < 1:15657991‑M1/18‑2 (MQ=255) aaatatccgaattttttATGGCGAAAATTATAatt < 1:14121080‑M1/18‑2 (MQ=255) cAAAGCGTTATTTATAATGGCGAAATTTATAATCa < 1:16130016/35‑1 (MQ=255) aaaGCGTTATTTATAATGGCGAAATTTATAATCAg > 1:6675019/1‑35 (MQ=255) aaaGCGTTATTTATAATGGCGAAATTTATAATCAg < 1:12351924/35‑1 (MQ=255) aaaGCGTTATTTATAATGGCGAAATTTATAATCAg < 1:20328667/35‑1 (MQ=255) aaGCGTTATTTATAATGGCGAAATTTATAATCAgg > 1:19004272/1‑35 (MQ=255) aaGCGTTATTTATAATGGCGAAATTTATAATCAgg < 1:8731700/35‑1 (MQ=255) aGCGTTATTTATAATGGCGAAATTTATAATCAGGa > 1:10407508/1‑35 (MQ=255) gCGTTATTTATAATGGCGAAATTTATAATCAGGaa > 1:4062836/1‑35 (MQ=255) gCGTTATTTATAATGGCGAAATTTATAATCAGGaa < 1:8526220/35‑1 (MQ=255) cGTTATTTATAATGGCGAAATTTATAATCAGGAAc < 1:4374795/35‑1 (MQ=255) cGTTATTTATAATGGCGAAATTTATAATCAGGAAc < 1:19290665/35‑1 (MQ=255) gTTATTTATAATGGCGAAATTTATAATCAGGAACt > 1:17977231/1‑35 (MQ=255) gTTATTTATAATGGCGAAATTTATAATCAGGAACt < 1:17314142/35‑1 (MQ=255) gTTATTTATAATGGCGAAATTTATAATCAGGAACt > 1:13421105/1‑35 (MQ=255) gTTATTTATAATGGCGAAATTTATAATCAGGAACt > 1:12491084/1‑35 (MQ=255) gTTATTTATAATGGCGAAATTTATAATCAGGAACt > 1:457933/1‑35 (MQ=255) tatttatAATGGCGAAATTTATAATCAGGAACTCa > 1:11032138/1‑35 (MQ=255) tatttatAATGGCGAAATTTATAATCAGGAACTCa < 1:18728868/35‑1 (MQ=255) atttatAATGGCGAAATTTATAATCAGGAACTCAc > 1:8771891/1‑35 (MQ=255) atttatAATGGCGAAATTTATAATCAGGAACTCAc > 1:10609444/1‑35 (MQ=255) atttatAATGGCGAAATTTATAATCAGGAACTCAc > 1:18408626/1‑35 (MQ=255) tttatAATGGCGAAATTTATAATCAGGAACTCACt < 1:7139817/35‑1 (MQ=255) tttatAATGGCGAAATTTATAATCAGGAACTCACt > 1:19411230/1‑35 (MQ=255) ttatAATGGCGAAATTTATAATCAGGAACTCACTg < 1:6986947/35‑1 (MQ=255) tataATGGCGAAATTTATAATCAGGAACTCACTGa < 1:5877320/35‑1 (MQ=255) tataATGGCGAAATTTATAATCAGGAACTCACTGa > 1:12281887/1‑35 (MQ=255) tataATGGCGAAATTTATAATCAGGAACTAACTGa < 1:5560070/35‑1 (MQ=255) ataATGGCGAAATTTATAATCAGGAACTCACTGaa < 1:13655516/35‑1 (MQ=255) taATGGCGAAATTTATAATCAGGAACTCACTGAAg > 1:3028629/1‑35 (MQ=255) taATGGCGAAATTTATAATCAGGAACTCACTGAAg > 1:9620698/1‑35 (MQ=255) aaTGGCGAAATTTATAATCAGGAACTCACTGAAGt < 1:14351501/35‑1 (MQ=255) aaTGGCGAAATTTATAATCAGGAACTCACTGAAGt > 1:20508929/1‑35 (MQ=255) aaTGGCGAAATTTATAATCAGGAACTCACTGAAGt > 1:5273230/1‑35 (MQ=255) ATGGCGAAATTTATAATCAGGAACTCACTGAAGtt > 1:7343612‑M1/1‑35 (MQ=255) ATGGCGAAATTTATAATCAGGAACTCACTGAAGtt > 1:1507088‑M1/1‑35 (MQ=255) ATGGCGAAATTTATAATCAGGAACTCACTGAAGtt > 1:5561779‑M1/1‑35 (MQ=255) | GATATTCCCGTTGGTCAGCAAAGCGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACTGAAGTT > REL606/3820575‑3820643 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |