New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2169426 = | 52 (0.510) | 13 (0.160) | 6/38 | NT | 13.2% | coding (329/1158 nt) | yehY | predicted transporter subunit: membrane component of ABC superfamily |
? | REL606 | = 2730083 | 130 (1.600) | coding (2203/2253 nt) | hypF | carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases |
Only 100 of 141 total aligned reads displayed.
CAGCAATGCCAGCGCCGCAGCCAGCCAGAAACCACTGCCGAGGCTGGTACGCGCCAGCGCACTGCCATT > REL606/2169392‑2169460 | cccccgctaaccaacgcgccgcagcaataaccccc > 1:970966‑M1/35‑35 (MQ=255) cccccgctaaccaacgcgccgcagcaataaccccc > 1:10030078‑M1/35‑35 (MQ=255) cacccgctaaccaacgcgccgcagcaataaccccc < 1:436702‑M1/1‑1 (MQ=255) cacccgctaaccaacgcgccgcagcaataaccccc > 1:1178477‑M1/35‑35 (MQ=255) cAGCAATGCCAGCGCCGCAGCCAGCCAGAAACCAc > 1:10047440/1‑35 (MQ=255) acccgctaaccaacgcgccgcagcaataaccccCt < 1:7994208‑M1/2‑1 (MQ=255) acccgctaaccaacgcgccgcagcaataaccccCt > 1:1751562‑M1/34‑35 (MQ=255) acccgctaaccaacgcgccgcagcaataaccccCt < 1:20580416‑M1/2‑1 (MQ=255) acccgctaaccaacgcgccgcagcaataaccccCt > 1:19484764‑M1/34‑35 (MQ=255) acccgctaaccaacgcgccgcagcaataaacccCt > 1:1637456‑M1/34‑35 (MQ=255) acaaaTCCCGGCGCCGCAGCCAGCCAGAAACCACt < 1:4777330/32‑1 (MQ=21) aGCAATGCCATCGCCGCAGCCAGCCAGAAACCACt > 1:20107818/1‑35 (MQ=255) aGCAATGCCAGCGCCGCAGCCAGCCAGAAACCACt > 1:11573060/1‑35 (MQ=255) aGCAATGCCAGCGCCGCAGCCAGCCAGAAACCACt > 1:2160186/1‑35 (MQ=255) gCAATGCCAGCGCCGCAGCCAGCCAGAAACCACTg > 1:13448773/1‑35 (MQ=255) cccgctaaccaacgcgccgcagcaataaccccCTg > 1:13875931‑M1/33‑35 (MQ=255) cccgctaaccaacgcgccgcagcaataaccccCTg > 1:12286047‑M1/33‑35 (MQ=255) cccgctaaccaacgcgccgcagcaataaccccCTg > 1:4658110‑M1/33‑35 (MQ=255) cccgctaaccaacgcgccgaagcaataaccccCTg > 1:19162950‑M1/33‑35 (MQ=255) ncgctaaccaacgcgccgcagcaataaccccCTGc < 1:3614775‑M1/4‑1 (MQ=255) ccgctacccaacgcgccgcagcaataaccccCTGc > 1:1958201‑M1/32‑35 (MQ=255) ccgctaaccaacgcgccgcagcaataacccccagc < 1:20357440‑M1/4‑4 (MQ=255) ccgctaaccaacgcgccgcagcaataaccccCTGc < 1:5018383‑M1/4‑1 (MQ=255) ccgctaaccaacgcgccgcagcaataaccccCTGc < 1:6185667‑M1/4‑1 (MQ=255) ccgctaaccaacgcgccgcagcaataaccccCTGc < 1:4242470‑M1/4‑1 (MQ=255) ccgctaaccaacgcgccgcagcaataaccccCTGc < 1:17638924‑M1/4‑1 (MQ=255) ccgctaaccaacgcgccgcagcaataaccccCTGc > 1:11547188‑M1/32‑35 (MQ=255) ccgctaaccaacgcgccgcagcaataaccccCTGc > 1:12753027‑M1/32‑35 (MQ=255) cAATGCCGGCGCCGCAGCCAGCCAGAAACCACTGc < 1:19771476/35‑1 (MQ=255) cAATGCCAGCGCCGCAGCCAGCCAGAAACCACTGc > 1:16184742/1‑35 (MQ=255) cAATCCCAGCCCCGCAGCCAGCCAGAAACCACTGc < 1:3492421/35‑1 (MQ=25) cgctaaccaacgcgccgcagcaataaccccCTGcc < 1:15615628‑M1/5‑1 (MQ=255) cgctaaccaacgcgccgcagcaataaccccCTGcc < 1:1603213‑M1/5‑1 (MQ=255) cgctaaccaacgcgccgcagcaataaccccCTGcc < 1:20274533‑M1/5‑1 (MQ=255) cgctaaccaacgcgccgcagcaataaccccCTGcc < 1:10681289‑M1/5‑1 (MQ=255) cgctaaccaacgcgccgcagcaataaccccCTGcc < 1:7759532‑M1/5‑1 (MQ=255) cgctaaccaacgcgccgcagcaataaccccCTGcc < 1:2955831‑M1/5‑1 (MQ=255) aaTGCCAGCGCCGCAGCCAGCCAGAAACCACTGcc > 1:15588648/1‑35 (MQ=255) aaTGCCAGCGCCGCAGCCAGCCAGAAACCACTGcc > 1:6722362/1‑35 (MQ=255) aaTGCCAGCGCCGCAGCCAGCCAGAAACCACTGcc > 1:9237308/1‑35 (MQ=255) aaTGCCAGCGCCGCAGCCAGCCAGAAACCACTGcc > 1:5729581/1‑35 (MQ=255) aTGCCAGCGCCGCAGCCAGCCAGAAACCACTGCCg > 1:13585547/1‑35 (MQ=255) tGCCAGCGCCGCAGCCAGCCAGAAACCACTGCCGa > 1:11600025/1‑35 (MQ=255) ccAGCGCCGCAGCCAGCCCGAAACCACTGCCGAgg > 1:7887918/1‑35 (MQ=255) cAGCGCCGCAGCCAGCCAGAAACCACTGCCGAGGc > 1:5063363/1‑35 (MQ=255) cAGCGCCGCAGCCAGCCAGAAACCACTGCCGAGGc > 1:505318/1‑35 (MQ=255) aGCGCCGCAGCCAGCCAGAAACCACTGCCGAGGCt > 1:641707/1‑35 (MQ=255) aGCGCCGCAGCCAGCCAGAAACCACTGCCGAGGCt > 1:16116464/1‑35 (MQ=255) cgccgcAGCCAGCCAGAAACCACTGCCGAGGCTgg > 1:9681068/1‑35 (MQ=255) gccgcAGCCAGCCAGAAACCACTGCCGAGGCTGGt > 1:918086/1‑35 (MQ=255) gccgcAGCCAGCCAGAAACCACTGCCGAGGCTGGt > 1:2860614/1‑35 (MQ=255) ccgcAGCCAGCCAGAAACCACTCCCGAGGCTGGTa > 1:8504721/1‑35 (MQ=255) gcAGCCAGCCAGAAACCACTGCCGAGGCTGGTAcg > 1:18739713/1‑35 (MQ=255) cagccagcCAGAAACCACTGCCGAGGCTGGTAcgc > 1:18084526/1‑35 (MQ=255) cagccagcCAGAAACCACTGCCGAGGCTGGGAcgc > 1:10847172/1‑35 (MQ=255) cgccacccaGAACCCCCTGCCGAGGCTGGTAcgcg < 1:7484059/34‑1 (MQ=25) agccagccAGAAACCACTGCCGAGGCTGGTAcgcg > 1:14619408/1‑35 (MQ=255) agccagccAGAAACCACTGCCGAGGCTGGTAcgcg > 1:18924270/1‑35 (MQ=255) gccagccaGAAACCACTGCCGAGGCTGGTACgcgc > 1:11908954/1‑35 (MQ=255) cccacccagAACCCCCTGCCGAGGCTGGTACgcgc < 1:7442685/34‑1 (MQ=25) cccacccaaAACCCCCTGCCGAGGCTGGTACgcgc < 1:12262246/34‑1 (MQ=19) cagccagAAACCACTGCCGAGGCTGGTACGCGCCa > 1:7126302/1‑35 (MQ=255) cagccagAAACCACTGCCGAGGCTGGTACGCGCCa > 1:17678558/1‑35 (MQ=255) cagccaaAACCCCCTGCCGAGGCTGGTACGCGCCa < 1:7875395/35‑1 (MQ=25) cagcaagaaccccCTGCCGAGGCTGGTACGCGCCa > 1:15013945‑M1/14‑35 (MQ=255) gaccaaAACCCCCTGCCGAGGCTGGTACGCGCCAg < 1:18353102/33‑1 (MQ=25) ccccaaAAACCCCTGCCGAGGCTGGTACGCGCCAg < 1:18066306/33‑1 (MQ=25) agccagAAACCACTGCCGAGGCTGGTACGCGcccg > 1:13229542/1‑33 (MQ=255) agccaaAACCCCCTGCCGAGGCTGGTACGCGCCAg < 1:6980997/35‑1 (MQ=25) agcaaaaaccccCTGCCGAGGCTGGTACGCGCCAg > 1:774022‑M1/13‑35 (MQ=255) gccagAAACCACTGCCGAGGCTGGTACGCGCCAgc > 1:4704269/1‑35 (MQ=255) gcaaaaaccccCTGCCGAGGCTGGTACGCGCCAgc > 1:9621149‑M1/12‑35 (MQ=255) cccaaAACCCCCTGCCGAGGCTGGTACGCGCCTgc < 1:9525140/34‑1 (MQ=19) ccaaAACCCCCTGCCGAGGCTGGTACGCGCCAgcg < 1:5947203/35‑1 (MQ=25) caaaaaccccCTGCCGAGGCTGGTACGCGCCAgcg > 1:4718825‑M1/11‑35 (MQ=255) cagAAACCACTGCCGAGGCTGGTACGCGCCAgcgc > 1:478433/1‑35 (MQ=255) cagAAACCACTGCCGAGGCTGGTACCCGCCAgcgc > 1:3731800/1‑35 (MQ=255) cagAAACCACTGCCGAGGCTGGGACGCGCCAgcgc > 1:16291906/1‑35 (MQ=255) cagAAACCACTGCCGAGGCTGGGACGCGCCAgcgc > 1:1429828/1‑35 (MQ=255) aaaaaccccCTGCCGAGGCTGGTACGCGCCAgcgc > 1:10311820‑M1/10‑35 (MQ=255) aaaaccccCTGCCGAGGCTGGTACGCGCCAGCGCa > 1:12289531‑M1/9‑35 (MQ=255) gAACCCACTGCCGAGGCTGGTACGCGCCAGCGCAc < 1:19013429/35‑1 (MQ=255) gAAACCACTGCCGAGGCTGGTACGCGCCAGCGCAc > 1:14046209/1‑35 (MQ=255) aacccccCTGCCGAGGCTGGTACGCGCCAGCGCAc > 1:7681731‑M1/8‑35 (MQ=255) aaaccccCTGCCGAGGCTGGTACGCGCCAGCGCAc > 1:13510748‑M1/8‑35 (MQ=255) aaaccccCTGCCGAGGCTGGTACGCGCCAGCGCAc > 1:3115019‑M1/8‑35 (MQ=255) aaaccccCTGCCGAGGCTGGTACGCGCCAGCGCAc > 1:13530348‑M1/8‑35 (MQ=255) aaccccCTGCCGAGGCTGGTACGCGCCAGCGCACt > 1:17745148‑M1/7‑35 (MQ=255) cccccCTGCCGAGGCTGGTACGCGCCAGCGCACTg > 1:8567580‑M1/6‑35 (MQ=255) accccCTGCCGAGGCTGGTACGCGCCAGCGCACTg > 1:370236‑M1/6‑35 (MQ=255) aaCCCCTGCCGAGGCTGGTACGCGCCAGCGAACTg < 1:12472948/35‑1 (MQ=37) aaCCACTGCCGAGGCTGGGACGCGCCAGCGCACTg > 1:9286977/1‑35 (MQ=255) aaCCACTGCCGAGGCTGGGACGCGCCAGCGCACTg > 1:16907070/1‑35 (MQ=255) ccACTGCCGAGGCTGGTACGCGCCAGCGCACTGcc > 1:12879964/1‑35 (MQ=255) ccACTGCCGAGGCTGGTACGCGCCAGCGCACTGcc > 1:2820600/1‑35 (MQ=255) ccACTGCCGAGCCTGGTACGCGCCAGCGCACTGcc > 1:8971594/1‑35 (MQ=255) ccACTGCCGAGCCTGGTACGCGCCAGCGCACTGcc > 1:14686416/1‑35 (MQ=255) cACTGCCGAGGCTGGTACGCGCCAGCGCACTGCCa > 1:390997/1‑35 (MQ=255) cACTGCCGAGGCTGGGACGCGCCAGCGCACTGCCa > 1:8454504/1‑35 (MQ=255) CTGCCGAGGCTGGTACGCGCCAGCGCACTGCCAtt < 1:12966831‑M1/35‑1 (MQ=255) | CAGCAATGCCAGCGCCGCAGCCAGCCAGAAACCACTGCCGAGGCTGGTACGCGCCAGCGCACTGCCATT > REL606/2169392‑2169460 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |