New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1337070 =141 (1.370)6 (0.070) 5/42 NT 7.6% coding (463/591 nt) ribA GTP cyclohydrolase II protein
?REL606 4326307 = 22 (0.240)coding (1153/1341 nt) dcuB C4‑dicarboxylate antiporter

AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/1337106‑1337070
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagCCGGTGCTGAAGCCACGATGTATGCCGGATCAAC  >  REL606/4326307‑4326340
                                                                       
AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAA                                      >  1:3445463/1‑35
AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAA                                      <  1:5168830/35‑1
AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAA                                      >  1:15845067/1‑35
AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAA                                      >  1:13699265/1‑35
AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAA                                      >  1:15527553/1‑35
 ATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAA                                     >  1:19031775/1‑35
 ATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAA                                     >  1:9108452/1‑35
 ATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAA                                     >  1:13208978/1‑35
 ATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAA                                     >  1:13226339/1‑35
  TGAAGTCCGCTTGTTAACCAATAACCCGAAAAAAG                                    <  1:9353470/35‑1
                     AATAACCCGAAAAAAGCCGGTGCTGAAGCCACGAT                 <  1:6660830/35‑1
                       TAACCCGAAAAAAGCCGGTGCTGAAGCCACGATGT               <  1:8250746/35‑1
                        AACCCGAAAAAAGCCGGTGCTGAAGCCACGATGTA              <  1:6725320/35‑1
                        AACCCAAAAAAAGCCGGTGCTGAAGCCACGATGTA              <  1:5301302/35‑1
                         ACCCGGAAAAAGCCGGTGCTGAAGCCACGATGTAT             <  1:243713/35‑1
                          CCCAAAAAAAGCCGGTGCTGAAGCCACGATGTATG            <  1:5013937/35‑1
                            gGAAAAAAGCCGGTGCTGAAGCCACGATGTATGCC          <  1:17599155/34‑1
                            cggAAAAAGCCGGTGCTGAAGCCACGATGTATGCC          <  1:201886/32‑1
                             GAACAAAGCCGGTGCTGAAGCCACGATGTATGCCG         <  1:10959388/35‑1
                                AAAAGCCGGTGCTGAAGCCACGATGTATGCCGGAT      <  1:10875584/35‑1
                                 AAAGCCGGTGCTGAAGCCACGATGTATGCCGGATC     <  1:19267876/35‑1
                                 AAAGCCGGTGCTAAAGCCACGATGTATGCCGGATC     <  1:15816083/35‑1
                                 AAAGCCGGGGCTGAAGCCACGATGTATGCCGGATC     <  1:2847948/35‑1
                                  AAGCCGGTGCTGAAGCCACGATGTATGCCGGATCA    <  1:18429888/35‑1
                                  AAGCCGGTGCTGAAGCCACGATGTATGCCGGATCA    >  1:6927484/1‑35
                                  AAGCCGGTGCTGAAGCCACGATGTATGCCGGATCA    <  1:11851125/35‑1
                                  AAGCCGGTGCTGAAGCCACGATGTATGCCGGATCA    <  1:9770302/35‑1
                                   AGCCGGTGCTGAAGCCACGATGTATGCCGGATCAA   >  1:17001189/1‑35
                                   AGCCGGTGCTGAAGCCACGATGTATGCCGGATCAA   <  1:7066477/35‑1
                                    GCCGGTGCTGAAGCCACGATGTATGCCGGATCAAC  <  1:13039844/35‑1
                                    GCCGGTGCTGAAGCCACGATGTATGCCGGATCAAC  >  1:9273656/1‑35
                                    GCCGGTGCTGAAGCCACGATGTATGCCGGATCAAC  <  1:979453/35‑1
                                    GCCGGTGCTGAAGCCACGATGTATGCCGGATCAAC  >  1:997233/1‑35
                                    GCCGGTGCTAAAGCCACGATGTATGCCGGATCAAC  <  1:12811425/35‑1
                                                                       
AATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/1337106‑1337070
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagCCGGTGCTGAAGCCACGATGTATGCCGGATCAAC  >  REL606/4326307‑4326340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.