New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 326209 = | 90 (0.880) | 5 (0.050) | 3/46 | NT | 7.2% | coding (854/1887 nt) | prpE | predicted propionyl‑CoA synthetase with ATPase domain |
? | REL606 | 3368427 = | 42 (0.430) | coding (508/990 nt) | rpoA | DNA‑directed RNA polymerase subunit alpha |
Only 100 of 175 total aligned reads displayed.
GGCGGTGTGTTCTTTTGTGCTTCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTCTACGCGCCG > REL606/326175‑326243 | ggcggTGTGTTCTTTTGTGCTTCGGATATCGGCTg < 1:2665115/35‑1 (MQ=255) ggcggTGTGTTCTTTTGTGCTTCGGATATCGGCTg < 1:19251401/35‑1 (MQ=255) attcattcggaagaagatgagcgcccaatcggccg < 1:16775112‑M1/1‑1 (MQ=255) attcattcggaagaagatgagcgcccaatcggccg < 1:19133240‑M1/1‑1 (MQ=255) gcggTGTGTTCTTTTGTGCTTCGGATATCGGCTgg < 1:13391132/35‑1 (MQ=255) tcattcggaagaagatgagcgcccaatcggccggg < 1:18780528‑M1/3‑1 (MQ=255) gacctgctgtaatctgaccccgttcagCGGGTggg < 1:8882106‑M1/8‑1 (MQ=255) gacctgctgtaatctgaccccgttcagCGGCTggg < 1:4978393‑M1/8‑1 (MQ=255) gacctgctgtaatctgaccccgttcagCGGCTggg < 1:7143198‑M1/8‑1 (MQ=255) cggTGTGTTCTTTTGTGCTTCGGATATCGGCTggg > 1:11587789/1‑35 (MQ=255) ggTGTGTTCTTTTGTGCTTCGGATATCGGCTgggg > 1:10215012/1‑34 (MQ=255) ggTGTGTTCTTTTGTGCTTCGGATATCGGCTgggg > 1:15866701/1‑34 (MQ=255) ggTGTGTTCTTTTGTGCTTCGGATATCGGCTGggt < 1:15590060/35‑1 (MQ=255) cattcggaagaagatgagcgcccaatcggccGggt < 1:1381351‑M1/4‑1 (MQ=255) accttctgtaatctgaccccgttcagCGGCTGggt < 1:6894330‑M1/9‑1 (MQ=255) gtgtgtTCTTTTGTGCTTCGGATATCGGCTGggtg < 1:6399422/35‑1 (MQ=255) gtgtgtTCTTTTGTGCTTCGGATATCGGCTGggtg < 1:13057429/35‑1 (MQ=255) cctgctgtaatctgaccccgttcagCGGctgggcg < 1:16580461‑M1/10‑3 (MQ=255) cctgctgtaatctgaccccgttcagCGGCTGggtg < 1:12151299‑M1/10‑1 (MQ=255) cctgctgtaatctgaccccgttcagCGGCTGggtg < 1:8290480‑M1/10‑1 (MQ=255) cctgctgtaacctgaccccgttcagCGGCTGggtg < 1:13912201‑M1/10‑1 (MQ=255) attcggaagaagatgagcgcccaatcggccGggtg < 1:12059086‑M1/5‑1 (MQ=255) tgtgtTCTTTTGTGCTTCGGATATCGGCTGggtgg < 1:18557962/35‑1 (MQ=255) tgtgtTCTTTTGTGCTTCGGATATCGGCTGggggg > 1:5871000/1‑35 (MQ=255) tgtgtTCTTTTGTGCTTCGGATATCGGCTGggggg > 1:5056107/1‑35 (MQ=255) tgtgtTCTTTTGTGCTTCGGATATCGGCTGggggg > 1:146021/1‑35 (MQ=255) ctgctgtaatctgaccccgttcagCGGCTGggtgg < 1:16241669‑M1/11‑1 (MQ=255) ctgctgtaatctgaccccgttcagCGGCTGggtgg < 1:10113398‑M1/11‑1 (MQ=255) tgctgtaatctgaccccgttcagCGGCTGggtggt < 1:5690320‑M1/12‑1 (MQ=255) tcggaagaagatgagcgcccaatcggccgggtggg < 1:15902812‑M1/7‑2 (MQ=255) gtgtTCTTTTGTGCTTCGGATATCGGCTGggtggt < 1:14694155/35‑1 (MQ=255) gtgtTCTTTTGTGCTTCGGATATCGGCTGggtggt < 1:6612041/35‑1 (MQ=255) gtgtTCTTTTGTGCTTCGGATATCGGCTGggtggt < 1:10076864/35‑1 (MQ=255) tgtTCTTTTGTGCTTCGGATATCGGCTGggggggg > 1:672411/1‑33 (MQ=38) tgtTCTTTTGTGCTTCGGATATCGGCTGggggggg > 1:4525998/1‑33 (MQ=38) tgtTC‑TTTGTGCTTCGGATATCGGCTGGGtggtgg < 1:16687501/35‑1 (MQ=38) gctgtaatctgaccccgttcagCGGCTGGggggtg < 1:13349467‑M1/13‑1 (MQ=255) gtTCTTTTGTGCTTCGGATATCGGCTGGGtggtgg < 1:10475789/35‑1 (MQ=255) gtTCTTTTGTGCTTCGGATATCGGCTGGGtggtgg < 1:7285575/35‑1 (MQ=255) gtTCTTTTGTGCTTCGGATATCGGCTGGGgggggg > 1:12462708/1‑35 (MQ=38) gtTCTTTTGTGCTTCGGATATCGGCTGGGgggggg > 1:3005147/1‑35 (MQ=38) gtTCTTTTGTGCTTCGGATATCGGCTGGGgggggg > 1:5532959/1‑35 (MQ=38) gtTCTTTTGTGCTTCGGATATCGGCTGGGgggggg > 1:17694161/1‑35 (MQ=38) gtTCTTTTGTGCTTCGGATATCGGCTGGGgggggg > 1:18457324/1‑35 (MQ=38) ctgtaatctgaccccgttcagCGGctgggtggcgg < 1:10739194‑M1/14‑4 (MQ=255) ttCTTTTGTGCTTCGGATATCGGCTGGGGGGGggg > 1:12724014/1‑35 (MQ=38) ttCTTTTGTGCTTCGGATATCGGCTGGGGGGGggg > 1:10875157/1‑35 (MQ=38) tgtaatctgaccccgttcagCGGCTGGgtggtggt < 1:16142710‑M1/15‑2 (MQ=255) gaagaagatgagcgcccaatcggccGGGTGGTggg < 1:8429175‑M1/10‑1 (MQ=255) tCTTTTGTGCTTCGGATATCGGCTGGGTGGTgggg < 1:3245887/35‑1 (MQ=255) tCTTTTGTGCTTCGGATATCGGCTGGGGGGGgggg > 1:11063988/1‑35 (MQ=255) gtaatctgaccccgttcagCGGCTGGGTGCtgggc < 1:14783956‑M1/16‑2 (MQ=255) aagaagatgagcgcccaatcggccGGGTGGggggc < 1:330604‑M1/11‑2 (MQ=255) aagaagatgagcgcccaatcggccGGGTGGTgggg < 1:5816918‑M1/11‑1 (MQ=255) taatctgaccccgttcagCGGCTgggtggtggcgg < 1:13330638‑M1/17‑4 (MQ=255) taatctgaccccgttcagCGGCTGGGTGgtgggag < 1:11989631‑M1/17‑3 (MQ=255) cTTTTGTGCTTCGGATATCGGCTGGGGGGGggggg > 1:20516132/1‑34 (MQ=255) ttttGTGCTTCGGATATCGGCTGGGTGGTGGGGCa < 1:12569186/35‑1 (MQ=255) ttttGTGCTTCGGATATCGGCTGGGGGGGgggggg > 1:6302782/1‑33 (MQ=255) aatctgaccccgttcagCGGCTGGGTggtgggcgg < 1:15150431‑M1/18‑4 (MQ=255) tttGTGCTTCGGATATCGGCTGGGTGGTGGGGCAt < 1:15404998/35‑1 (MQ=255) tttGTGCTTCGGATATCGGCTGGGGGGTggggggc > 1:795100/1‑32 (MQ=37) tttGTGCTTCGGATATCGGCTGGGGGGGggggggg > 1:9666895/1‑32 (MQ=255) tttGTGCTTCGGATATCGGCTGGGGGGGggggggg > 1:2333948/1‑32 (MQ=255) tttGTGCTTCGGATATCGGCTGGGGGGGggggggg > 1:12895886/1‑32 (MQ=255) atctgaccccgttcagCGGCTGGGTggtggggggg < 1:19657853‑M1/19‑4 (MQ=255) ttGTGCTTCGGATATCGGCTGGGTGGTGGGGCAtt < 1:13202998/35‑1 (MQ=255) ttGTGCTTCGGATATCGGCTGGGTGGTGGGGCAtt < 1:14380708/35‑1 (MQ=255) tgtgCTTCGGATATCGGCTGGGGGGGGGGGGAtgc > 1:7871873/1‑33 (MQ=255) gtgCTTCGGATATCGGCTGGGTGGTGGGGCATTCg < 1:20293835/35‑1 (MQ=255) gtgCTTCGGATATCGGCTGGGTGGTGGGGCATTCg < 1:17877911/35‑1 (MQ=255) gtgCTTCGGATATCGGCTGGGTGGTGGGGCATTCg < 1:14398574/35‑1 (MQ=255) tgattCGGATATCGGCTGGGTGGTGGGGCATTCGt < 1:14746787/32‑1 (MQ=255) tgCTTCGGATATCGGCTGGGTGGTGGGGCATTCGt < 1:11996043/35‑1 (MQ=255) gCTTCGGATATCGGCTGGGTGGTGGGGCATTCGta < 1:15407410/35‑1 (MQ=255) gCTTCGGATATCGGCTGGGTGGTGGGGCATTCGta < 1:2930238/35‑1 (MQ=255) cTTCGGATATCGGCTGGGTGGTGGGGCATTCGtat < 1:11333607/35‑1 (MQ=255) cTTCGGATATCGGCTGGGTGGTGGGGCATTCGtat < 1:16394061/35‑1 (MQ=255) cTTCGGATATCGGCTGGGGGGGGGGGGGTTTGtat > 1:8906319/1‑35 (MQ=255) ttCGGATATCGGCTGGGTGGTGGGGCATTCGtata < 1:10714239/35‑1 (MQ=255) ttCGGATATCGGCTGGGTGGTGGGGCATTCGtata < 1:17877642/35‑1 (MQ=255) cGGATATCGGCTGGGGGGGGGGGGGCTCGTCTATc > 1:15086419/1‑35 (MQ=255) ggATATCGGCTGGGTGGTGGGGCATTCGTATATCg < 1:9376865/35‑1 (MQ=255) ggATATCGGCTGGGTGGTGGGGCATTCGTATATCg < 1:11509330/35‑1 (MQ=255) gATATCGGCTGGGTGGTGGGGCATTCGTATATCGt < 1:11477961/35‑1 (MQ=255) gATATCGGCTGGGTGGTGGGGCATTCGTATATCGt < 1:2737391/35‑1 (MQ=255) gATATCGGCTGGGTGGTGGGGCATTCGTATATCGt < 1:16897110/35‑1 (MQ=255) atatCGGCTGGGTGGTGGGGCATTCGTATATCGTc < 1:3963300/35‑1 (MQ=255) atatCGGCTGGGTGGGGGGGCATTCGTATATCGTc < 1:19583684/35‑1 (MQ=255) atCGGCTGGGTGGTGGGGCATTCGTATATCGTCTa < 1:20123649/35‑1 (MQ=255) tCGGCTGGGTGGTGGGGCATTCGTATATCGTCTAc < 1:6989931/35‑1 (MQ=255) tCGGCTGGGTGGTGGGGCATTCGTATATCGTCTAc < 1:3683847/35‑1 (MQ=255) GGCTGGGTGGTGGGGCATTCGTATATCGTCTAcgc < 1:17070290‑M1/35‑1 (MQ=255) GCTGGGTGGTGGGGCATTCGTATATCGTCTAcgcg > 1:15857100‑M1/1‑35 (MQ=255) GCGGGGTGGTGGGGCATTCGTATATCGTCTAcgcg > 1:3357747‑M1/1‑35 (MQ=255) CTGGGTGGTGGGGCATTCGTATATCGTCTACgcgc > 1:19750103‑M1/1‑35 (MQ=255) TGGGTGGTTGGGCATTCGTATATCGTCTACGcgcc < 1:4962766‑M1/35‑1 (MQ=255) GGGTGGTGGGGCATTCGTATATCGTCTACGcgccg > 1:12857163‑M1/1‑35 (MQ=255) GGGTGGTGGGGCATTCGTATATCGTCTACGcgccg > 1:8042215‑M1/1‑35 (MQ=255) GGGTGGTGGGGCATTCGTATATCGTCTACGcgccg < 1:172398‑M1/35‑1 (MQ=255) | GGCGGTGTGTTCTTTTGTGCTTCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTCTACGCGCCG > REL606/326175‑326243 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |