New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2981401 | 48 (0.470) | 13 (0.170) | 5/36 | NT | 15.6% | coding (553/705 nt) | yggS | predicted enzyme |
? | REL606 | 3882315 = | 105 (1.360) | coding (103/816 nt) | atpB | F0F1 ATP synthase subunit A |
Only 100 of 412 total aligned reads displayed.
ATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTACG > REL606/3882281‑3882348 | gtcaagtacatcgtaacggaaggtggtGTGGCTgg > 1:1226066‑M2/28‑35 (MQ=255) gtcaagtacatcgtaacggaaggtggtGGGGCTgg > 1:10602717‑M2/28‑35 (MQ=255) gtaaggcagtttgaagttgcacgccaaatggctgg > 1:9618957‑M2/35‑35 (MQ=255) gtaaggcagtttgaagttgcacgccaaatggctgg > 1:18351706‑M2/35‑35 (MQ=255) gctttctatgctgccgaacgccccagcatggctgg > 1:13255920‑M2/35‑35 (MQ=255) gatcatcggtatgatcggctttggcctggggctgg > 1:10957634‑M2/35‑35 (MQ=255) gaatgcgcgtttgcgcgcgatgaatcttcggctgg > 1:4590025‑M2/35‑35 (MQ=255) aTGTAGTCAATATTGATTTTCCAGAAGGTGGCTgg > 1:20502316/1‑35 (MQ=37) tactggccggtgctgctgggcgcggggtggctggg > 1:10257085‑M2/34‑35 (MQ=255) tactggccggtgctgctgggcgcggggtggctggg > 1:5829660‑M2/34‑35 (MQ=255) cgcactcagctcaaaagcctcggtttgtggttggg > 1:8377829‑M2/34‑35 (MQ=255) cgcactcagctcaaaagcctcggtttgtggttggg > 1:19684919‑M2/34‑35 (MQ=255) cctgctcctgcatggactccggtaactggctgggg > 1:5647560‑M2/33‑35 (MQ=255) caagtacatcgtaacggaaggtggtGTGGCtgggc > 1:9159203‑M2/26‑34 (MQ=255) aaggcagtttgaagttgcacgccaaatggctgggg > 1:3045813‑M2/33‑35 (MQ=255) tctttatttagcctggccctgatgctggctggggg > 1:2926373‑M2/32‑35 (MQ=255) gAGTCAATATTGATTGTCCAGAAGGTGGCTggggg > 1:7007562/1‑35 (MQ=255) cactcagctcaaaagcctcggtttgtggttggggg > 1:20263003‑M2/32‑35 (MQ=255) tggccggtgctgctgggcgcggagtggctgggggg > 1:2498400‑M2/31‑35 (MQ=255) tggccggtgctgctgggcgcggagtggctgggggg > 1:14259775‑M2/31‑35 (MQ=255) actcagctcaaaagcctcggtttgtggttgggggt > 1:17746025‑M2/31‑34 (MQ=255) actcagctcaaaagcctcggtttgtggttgggggt > 1:9540653‑M2/31‑34 (MQ=255) acgcggcgtttctccggtatcggtggggggtgggg > 1:4975451‑M2/30‑35 (MQ=255) aGTCAATATTGATTGTCCAGAAGGTGGCTgggggg > 1:9408588/1‑35 (MQ=255) aGTCAATATTGATTGTCCAGAAGGTGGCTgggggg < 1:6054748/35‑1 (MQ=255) aGTCAATATTGATTGTCCAGAAGGTGGCTgggggg > 1:20128186/1‑35 (MQ=255) tttatttagcctggccctgatgctggctggggggg > 1:8719839‑M2/30‑34 (MQ=255) gcagtttgaagttgcacgccaaatggctggggggg > 1:8013564‑M2/30‑34 (MQ=255) ctatgctgccgaacgccccagcatggctgGGGGGt > 1:1728966‑M2/30‑35 (MQ=255) cgcggcgtttctccggtatcggtgggggggggggg > 1:19308993‑M2/29‑34 (MQ=255) cgcggcgtttctccggtatcggtgggggGGGGGGt > 1:15205155‑M2/29‑35 (MQ=255) ttatttagcctggccctgatgctggctgggggggg > 1:11191453‑M2/29‑33 (MQ=255) tatgctgccgaacgccccagcatggctgGGGGTtt > 1:18111616‑M2/29‑35 (MQ=255) gcgtttgcgcgtgatgaatcttcggctgGGGGGtt > 1:19934631‑M2/29‑35 (MQ=255) gcggcgtttctccggtatcggtgggggGGGGGGtt > 1:5344783‑M2/28‑35 (MQ=255) gcggcgtttctccggtatcggtgggggGGGGGGtt > 1:18890271‑M2/28‑35 (MQ=255) gccggtgctgctgggcgcggagtggctgGGGGTtt > 1:11936483‑M2/29‑35 (MQ=255) tatttagcctggccctgatgctggctggggggggg > 1:1002430‑M2/28‑32 (MQ=255) ggtatgatcggctttggcctgtggctgGGGGTttt > 1:13775473‑M2/28‑35 (MQ=255) cggcgtttctccggtatcggtgggggGGGGGGttt > 1:16810126‑M2/27‑35 (MQ=255) ccggtgctgctgggcgcggagtggctgGGGGGttt > 1:16493296‑M2/28‑35 (MQ=255) cagctcaaaagcctcggtttgtggttgGGGGGttt > 1:17624010‑M2/28‑35 (MQ=255) cAATATTGATTGTCCAGAAGGTGGCTGGGGGGttt > 1:16192227/1‑35 (MQ=255) cAATATTGATTGTCCAGAAGGTGGCTGGGGGGttt < 1:4240004/35‑1 (MQ=255) atgctgccgaacgccccagcatggctgGGGGTttt > 1:11357587‑M2/28‑35 (MQ=255) tgctgccgaacgccccagcatggctgGGGGgtttc > 1:15954982‑M2/27‑34 (MQ=255) gtatgatcggctttggcctgtggctgGGGGGtttt > 1:6758062‑M2/27‑35 (MQ=255) gtatgatcggctttggcctgtggctgGGGGGtttt > 1:10356438‑M2/27‑35 (MQ=255) cctgcatggactccggtaactggctgGGGggttgt > 1:8148853‑M2/27‑33 (MQ=255) atttagcctggccctgatgctggctgGGGCgtttg > 1:6262844‑M2/27‑34 (MQ=255) aaTATTGATTGTCCAGAAGGTGGCTGGGGGGtttt > 1:1271748/1‑35 (MQ=255) tttgaagttgcacgccaaatggctgGGGGggtttt > 1:2631182‑M2/26‑34 (MQ=255) tatgatcggctttggcctgtggctgGGGGgttttt > 1:14595613‑M2/26‑34 (MQ=255) ctgcatggactccggtaactggctgGGGGGTTGtg > 1:19055405‑M2/26‑35 (MQ=255) atcgtaacggaaggtggtGTGGCTGGGGGtttttc > 1:15450486‑M2/19‑34 (MQ=255) atcgtaacggaaggtggtGTGGCTGGGGGgttttt > 1:11621332‑M2/19‑34 (MQ=255) atatTGATTGTCCAGAAGGTGGCTGGGGGGttttt > 1:2785224/1‑34 (MQ=255) atatTGATTGTCCAGAAGGTGGCTGGGGGGTTTtg > 1:8997180/1‑35 (MQ=255) ttgcgcgcgatgaatcttcggctgGGGggtttttt > 1:15486358‑M2/25‑33 (MQ=255) ttgcgcgcgatgaatcttcggctgGGGGGTTTtgt > 1:10147043‑M2/25‑35 (MQ=255) tcgtaacggaaggtggtGTGGCTGGGgggtttcct > 1:14786191‑M2/18‑32 (MQ=255) tgatcggctttggcctgtggctgGGgggttttttt > 1:19733766‑M2/24‑32 (MQ=255) tgaagttgcacgccaaatggctgGGGGGGTTtgtg > 1:3808703‑M2/24‑35 (MQ=255) cgtaacggaaggtggtGTGGCTGGGgggttttctc > 1:1875325‑M2/17‑32 (MQ=255) cgtaacggaaggtggtGTGGCTGGGGGGTTTtctg > 1:3559942‑M2/17‑35 (MQ=255) attgattgTCCAGAAGGTGGCTGGGGGGTTTtttg > 1:6384691/1‑35 (MQ=255) attgattgTCCAGAAGGTGGCTGGGGGGTTTtgtg < 1:8537398/35‑1 (MQ=255) attgattgTCCAGAAGGTGGCTGGGGGGTTTtgtg > 1:14734834/1‑35 (MQ=255) attgattgTCCAGAAGGGGGCTGGGGGGTTTtgtg > 1:5866281/1‑35 (MQ=255) tttctccggtatcggtgggggGGGGGGTTTTGTgg > 1:3069534‑M2/22‑35 (MQ=255) ttgattgTCCAGAAGGTGGCTGGGGGGTTTTGTgg < 1:10862982/35‑1 (MQ=255) gtaacggaaggtggtGTGGCTGGGGGGTTTTCTgg > 1:12876851‑M2/16‑35 (MQ=255) caaaagcctcggtttgtggttgGGGGGTTttttgt > 1:6605611‑M2/23‑34 (MQ=255) caaaagcctcggtttgtggttgGGGGGTTTTCTgg > 1:14892967‑M2/23‑35 (MQ=255) tgattgTCCAGAAGGTGGCTGGGGGGTTTTGTGGa > 1:3739294/1‑35 (MQ=255) gattgTCCAGAAGGTGGCTGGGGGGTTTTGTGGAt > 1:5064562/1‑35 (MQ=255) gattgTCCAGAAGGTGGCTGGGGGGTTTTGTGGAt > 1:14999282/1‑35 (MQ=255) attgTCCAGAAGGTGGCTGGGGGGTTTTGTGGATc < 1:5142531/35‑1 (MQ=255) attgTCCAGAAGGTGGCTGGGGGGTTTTGTGGATc < 1:1912301/35‑1 (MQ=255) attgTCCAGAAGGTGGCTGGGGGGTTTTGTGGATc > 1:4695872/1‑35 (MQ=255) gTCCAGAAGGTGGCTGGGGGGTTTTGTGGATccac > 1:11520548/1‑35 (MQ=255) gTCCAGAAGGTGGCTGGGGGGTTTTGTGGATccac > 1:9329000/1‑35 (MQ=255) tCCAGAAGGTGGCTGGGGGGTTTTGTGGATccacc < 1:2215528/35‑1 (MQ=255) tCCAGAAGGTGGCTGGGGGGTTTTGTGGATccacc > 1:15874337/1‑35 (MQ=255) ccAGAAGGTGGCTGGGGGGTTTTGTGGATccacca > 1:15653859/1‑35 (MQ=255) cAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAg > 1:10914243/1‑35 (MQ=255) aGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGc > 1:4032998/1‑35 (MQ=255) aGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGc < 1:7722681/35‑1 (MQ=255) gAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCg > 1:8268116/1‑35 (MQ=255) gAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCg > 1:18240105/1‑35 (MQ=255) aaGGTGGCTTGGGGGTTTTGTGGATCCACCAGCgg > 1:1173011/1‑34 (MQ=255) aGGTGGCTGGGGGGTTTTGTGGATCCACCAGCgag > 1:3259754/1‑35 (MQ=255) aGGTGGCTGGGGGGTTTTGTGGATCCACCAGCgag < 1:17483092/35‑1 (MQ=255) aGGTGGCTGGGGGGTTTTGTGGATCCACCAGAgag > 1:15085730/1‑35 (MQ=255) ggTGGCTGGGGGGTTTTTTGGATCCACCAGCgaga > 1:7146958/1‑35 (MQ=255) ggctgGGGGGTTTTGTGGATCCACCAGCGAGAATg < 1:17195532‑M2/30‑1 (MQ=255) ctgGGGGGTTTTGTGGATCCATCAGCGAGAATGTa > 1:13145248‑M2/4‑35 (MQ=255) ctgGGGGGTTTTGTGGATCCACCAGCGAGAATGTa < 1:18519260‑M2/32‑1 (MQ=255) gGGGGGTTTTGTGGATCCACCAGCGAGAATGTACg > 1:7589795‑M2/2‑35 (MQ=255) gGGGGGTTTTGTGGATCCACCAGCGAGAATGTACg < 1:546117‑M2/34‑1 (MQ=255) | ATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTACG > REL606/3882281‑3882348 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |