New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 220422468 (0.660)16 (0.200) 4/38 NT 14.9% coding (1109/1251 nt) yeiJ predicted nucleoside transporter
?REL606 2724133 = 129 (1.590)coding (227/774 nt) srlR DNA‑bindng transcriptional repressor

GGTGTGGCGCAACCGCAGAAAACGCCCCCACCACCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2204186‑2204224
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG  >  REL606/2724133‑2724166
                                                                         
GGTGTGGCGCAACCGCAGAAAACGCCCCCACCACC                                        >  1:6901935/1‑35
GGTGTGGCGCAACCGCAGAAAACGCCCCCACCACC                                        >  1:2155768/1‑35
 GTGTGGCGCAACCGCAGAAAACGCCCCCACCACCA                                       >  1:7004777/1‑35
  TGTGGCGCAACCGCAGAAAACGCCCCCACCACCAC                                      >  1:5890068/1‑35
   GTGGCGCAACCGCAGAAAACGCCCCCACCACCACC                                     >  1:7017178/1‑35
   GTGGCGCAACCGCAGAAAACGCCCCCACCACCACC                                     >  1:5227076/1‑35
    TGGCGCAACCGCAGAAAACGCCCCCACCACCACCC                                    >  1:3440910/1‑35
                       aCCCCCACCACCACCCACAAGAAAGAGCTGATTGC                 <  1:14498591/34‑1
                        CCCCCATCACCACCCACAAGAAAGAGCTGATTGCA                <  1:17548681/35‑1
                        CCCCCACCACCACCCACAAGAAAGAGCTGATTGCA                <  1:2331614/35‑1
                        CCCCCACCACCACCCACAAGAAAGAGCTGATTGCA                <  1:11728803/35‑1
                         cctCACCACCACCCACAAGAAAGAGCTGATTGCAG               <  1:14357180/32‑1
                         CCCCAACACCACCCACAAGAAAGAGCTGATTGCAG               <  1:9642691/35‑1
                          ctCACCACCACCCACAAGAAAGAGCTGATTGCAGA              <  1:13369916/33‑1
                          CCCATCACCACCCACAAGAAAGAGCTGATTGCAGA              <  1:3447136/35‑1
                          CCCACCACCACCCACAAGAAAGAGCTGATTGCAGA              <  1:13584371/35‑1
                          CCCACCACCACCCACAAGAAAGAGCTGATTGCAGA              <  1:3695243/35‑1
                           tCACCACCACCCACAAGAAAGGGCTGATTGCAGAA             <  1:18460529/34‑1
                           tCACCACCACCCACAAGAAAGAGCTGATTGCAGAA             <  1:11993047/34‑1
                           tCACCACCACCCACAAGAAAGAGCTGATTGCAGAA             <  1:1740997/34‑1
                           CCACCACCACCCACAAGAAAGAGCTGATTGCAGAA             <  1:12108993/35‑1
                           CCACCACCACCCACAAGAAAGAGCTGATTGCAGAA             <  1:6544750/35‑1
                           CCACCACCACCCACAAGAAAGAGCTGATTGCAGAA             <  1:1120109/35‑1
                            catCACCACCCACAAGAAAGAGCTGATTGCAGAAG            <  1:10436221/32‑1
                            catCACCACCCACAAGAAAGAGCTGATTGCAGAAG            <  1:8542538/32‑1
                             acaACCACCCACAAGAAAGAGCTGATTGCAGAAGC           <  1:3756991/32‑1
                             aaCACCACCCACAAGAAAGAGCTGATTGCAGAAGC           <  1:11242965/33‑1
                             ACCACCACCCACAAGAAAGAGCTGATTGCAGAAGC           <  1:16371269/35‑1
                             ACCACCACCCACAAGAAAGAGCTGATTGCAGAAGC           <  1:11538749/35‑1
                             ACCACCACCCACAAGAAAGAGCTGATTGCAGAAGC           <  1:5664325/35‑1
                             ACCACCACCCACAAGAAAGAGCTGATTGCAGAAGC           <  1:4316565/35‑1
                              tCACCACCCACAAGAAAGAGCTGATTGCAGAAGCT          <  1:10118614/34‑1
                              cccCCACCCACAAGAAAGAGCTGATTGCAGAAGCT          <  1:15432459/32‑1
                              aCACCACCCACAAGAAAGAGCTGATTGCAGAAGCT          <  1:19724864/34‑1
                              aCACCACCCACAAGAAAGAGCTGATTGCAGAAGCT          <  1:1620751/34‑1
                              CCACCGCCCACAAGAAAGAGCTGATTGCAGAAGCT          <  1:16485849/35‑1
                              CCACCACCCACAAGAAAGAGCTGATTGCAGAAGCT          <  1:4913352/35‑1
                              CCACCACCCACAAGAAAGAGCTGATTGCAGAAGCT          <  1:12977909/35‑1
                               ccCCACCCACAAGAAAGAGCTGATTGCAGAAGCTG         <  1:7554545/33‑1
                               CACCACCCACAAGAAAGAGCTGATTGCAGAAGCTG         <  1:5060007/35‑1
                               CACCACCCACAAGAAAGAGCTGATTGCAGAAGCTG         <  1:12295169/35‑1
                               CACCACCCACAAGAAAGAGCTGATTGCAGAAGCTG         <  1:6664720/35‑1
                               CACCACCCACAAGAAAGAGCTGATTGCAGAAGCTG         <  1:7390228/35‑1
                               CACCACCCACAAGAAAGAGCTGATTGAAGAAGCTG         <  1:17951218/35‑1
                                cCCAACCACAAGAAAGAGCTGATTGCAGAAGCTGC        <  1:3407889/34‑1
                                ACCGCCCACAAGAAAGAGCTGATTGCAGAAGCTGC        <  1:3608933/35‑1
                                ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC        <  1:1148497/35‑1
                                ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC        <  1:7156724/35‑1
                                ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC        <  1:18071998/35‑1
                                ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC        <  1:17400263/35‑1
                                ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC        <  1:9317735/35‑1
                                ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC        <  1:8769321/35‑1
                                ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC        <  1:2378930/35‑1
                                ACCACCCACAAGAAAGAGCTGATTGCAGAAGCTGC        <  1:3594885/35‑1
                                ACCACCCACAAGAAAGAGCTGATTGCAGAAGATGC        <  1:16804091/35‑1
                                 cccCCCACAAGAAAGAGCTGATTGCAGAAGCTGCC       <  1:6362212/32‑1
                                 CCACCCACAAGAAAGAGCTGATTGCAGAAGCTGCC       <  1:15895606/35‑1
                                 CCACCCACAAGAAAGAGCTGATTGCAGAAGCTGCC       <  1:10603636/35‑1
                                 CCACCCACAAGAAAGAGCTGATTGCAGAAGCTGCC       <  1:8252350/35‑1
                                  ccCCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG      <  1:11721494/33‑1
                                  CACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG      >  1:18482504/1‑35
                                  CACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG      >  1:1322899/1‑35
                                  CACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG      >  1:16153222/1‑35
                                  CACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG      >  1:4678642/1‑35
                                   ACCCACAAGAAAGAGCTGATTGCAGAATCTGCCGT     >  1:4581886/1‑35
                                   ACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGT     >  1:4965903/1‑35
                                   ACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGT     >  1:7148299/1‑35
                                   ACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGT     >  1:18415485/1‑35
                                    CCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTT    >  1:761688/1‑35
                                    CCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTT    >  1:9844502/1‑35
                                     CCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTA   >  1:9917473/1‑35
                                     CCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTA   >  1:6633581/1‑35
                                     CCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTA   >  1:2264338/1‑35
                                     CCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTA   >  1:19168125/1‑35
                                     CCACAAGAAAGAGCTGATTGCAGAAGCTGCAGTTA   <  1:19820487/35‑1
                                      CACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG  >  1:6205350/1‑35
                                      CACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG  >  1:3776169/1‑35
                                      CACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG  >  1:14827286/1‑35
                                      CACAAGAAAGAGCTGATTGCAGAAGCTGCAGTTAG  <  1:20231013/35‑1
                                      CACAAGAAAGAGCTGATTGCAGAAGCTGCAGTTAG  <  1:11090239/35‑1
                                                                         
GGTGTGGCGCAACCGCAGAAAACGCCCCCACCACCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2204186‑2204224
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG  >  REL606/2724133‑2724166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.