New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1306329 = | 80 (0.780) | 14 (0.190) | 4/34 | NT | 22.1% | intergenic (‑90/+281) | cls/kch | cardiolipin synthetase/voltage‑gated potassium channel |
? | REL606 | = 3839377 | 42 (0.580) | coding (1104/2415 nt) | gyrB | DNA gyrase subunit B |
Only 100 of 298 total aligned reads displayed.
CTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGCGGGGGTATAATGACCATTCT > REL606/1306295‑1306359 | tgcagcatcgataattttgccaaccacgattttcg > 1:16261348‑M1/35‑35 (MQ=255) ggcagcatcgataattttgccaaccacgattttcg < 1:16852067‑M1/1‑1 (MQ=255) ggcagcatcgataattttgccaaccacgattttcg > 1:662487‑M1/35‑35 (MQ=255) cgcacatcatacaccaaatgcaccagcctttTCAg > 1:14150806‑M1/32‑35 (MQ=255) cTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAg < 1:15308929/35‑1 (MQ=255) tGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGc < 1:13327805/35‑1 (MQ=255) tGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGc < 1:19762784/35‑1 (MQ=255) tGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGc < 1:3862686/35‑1 (MQ=255) gcagcatcgataattttgccaaccacgattttcgc < 1:20056396‑M1/2‑1 (MQ=255) gcagcatcgataattttgccaaccacgattttcgc < 1:3213306‑M1/2‑1 (MQ=255) gcagcatcgataattttgccaaccacgattttcgc < 1:11478283‑M1/2‑1 (MQ=255) gcagcatcgataattttgccaaccacgattttcgc < 1:5616079‑M1/2‑1 (MQ=255) gcagcatcgataattttgccaaccacgattttcgc < 1:6143029‑M1/2‑1 (MQ=255) gcaccatcgataattttgccaaccacgattttcgc > 1:19572273‑M1/34‑35 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc > 1:2902803‑M1/31‑35 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc > 1:11029556‑M1/31‑35 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc < 1:14908225‑M1/5‑1 (MQ=255) gcacatcatacaccaaatgcaccagcctttTCAGc > 1:13161140‑M1/31‑35 (MQ=255) caaagaacagcccctggataaacttgctctcCAGc < 1:12894880‑M1/4‑1 (MQ=255) ggCAAATAAAAACGCGGGAAAAGCACTGGTCAGCg < 1:13556982/35‑1 (MQ=255) ggCAAATAAAAACGCGGGAAAAGCACTGGTCAGCg > 1:17275964/1‑35 (MQ=255) cagcatggataattttgccaaccacgattttcgcg > 1:6330722‑M1/33‑35 (MQ=255) cagcatcgataattttgccaaccacgattttcgcg > 1:10159023‑M1/33‑35 (MQ=255) cagcatcgataattttgccaaccacgattttcgcg > 1:9343872‑M1/33‑35 (MQ=255) cacatcatacaccaaatgcaccagcctttTCAGCg > 1:12383721‑M1/30‑35 (MQ=255) cacatcatacaccaaatgcaccagcctttTCAGCg < 1:16540506‑M1/6‑1 (MQ=255) aaagcacagcccctggataaacttgctctcCAGCg < 1:5788795‑M1/5‑1 (MQ=255) gCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGt < 1:20129171/35‑1 (MQ=255) agcatcgataattttgcgaaccacgattttcGCGt > 1:19927966‑M1/32‑35 (MQ=255) agcatcgataattttgccaaccacgattttcGCGt < 1:2551552‑M1/4‑1 (MQ=255) acatcatactccaaatgcaccagcctttTCAGCGt < 1:15609913‑M1/7‑1 (MQ=255) acatcatacaccaaatgcaccagcctttTCAGCGt < 1:18275543‑M1/7‑1 (MQ=255) acatcatacaccaaatgcaccagcctttTCAGCGt < 1:10092681‑M1/7‑1 (MQ=255) cAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTc < 1:2653047/35‑1 (MQ=255) agaacagcccctggataaacttgctctcCAGCGTc < 1:4581970‑M1/7‑1 (MQ=255) agaacagcccctggataaacttgctctcCAGCGTc < 1:3054985‑M1/7‑1 (MQ=255) agaacagcccctggataaacttgctctcCAGCGTc < 1:7032122‑M1/7‑1 (MQ=255) gaacagcccctggataaacttgctctcCAGCGTcg < 1:2046542‑M1/8‑1 (MQ=255) atcatacaccaaatgcaccagcctttTCAGCGTcg < 1:15361005‑M1/9‑1 (MQ=255) atcatacaccaaatgcaccagcctttTCAGCGTcg > 1:6378456‑M1/27‑35 (MQ=255) aaaTAAAAACGCGGGAAAAGCACTGGTCAGCGTcg < 1:11226190/35‑1 (MQ=255) aaaTAAAAACGCGGGAAAAGCACTGGTCAGCGTcg < 1:5271978/35‑1 (MQ=255) tcatacaccaaatgcaccagcctttTCAGCgtctg < 1:13382392‑M1/10‑3 (MQ=255) tcatacaccaaatgcaccagcctttTCAGCGTcgg < 1:16423013‑M1/10‑1 (MQ=255) aacagcccctggataaacttgctctcCAGCGTcgg < 1:750125‑M1/9‑1 (MQ=255) aacagcccctggataaacttgctctcCAGCGTcgg < 1:4270302‑M1/9‑1 (MQ=255) aaTAAAAACGCGGGAAAAGCACTGGTCAGCGTcgg < 1:10634780/35‑1 (MQ=255) aaTAAAAACGCGGGAAAAGCACTGGTCAGCGTcgg < 1:19485758/35‑1 (MQ=255) tcgataattttgccaaccacgattttcGcgtctgg < 1:11600657‑M1/8‑4 (MQ=255) aTAAAAACGCGGGAAAAGCACTGGTCAGCGTcggg > 1:12035878/1‑35 (MQ=255) aTAAAAACGCGGGAAAAGCACTGGTCAGCGTcggg > 1:10718072/1‑35 (MQ=255) aTAAAAACGCGGGAAAAGCACTGGTCAGCGTcggg > 1:15910464/1‑35 (MQ=255) cgataattttgccaaccacgattttcGCGTcgggg < 1:5132009‑M1/9‑1 (MQ=255) cagcccctggataaacttgctctcCAGCGTcgggg < 1:1820504‑M1/11‑1 (MQ=255) agccccttgataaacttgctctcCAGCGTcggggg < 1:10288919‑M1/12‑1 (MQ=255) agcccctggataaacctgctctcCAGCGTcggggg < 1:6770817‑M1/12‑1 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggt > 1:2269612/1‑34 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggg > 1:3685548/1‑35 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggg < 1:8365631/35‑1 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggg > 1:9571039/1‑35 (MQ=255) aaaaaCGCGGGAAAAGCACTGGTCAGCGTcggggg > 1:14483045/1‑35 (MQ=255) gcccctggataaacttgctctcCAGCGtcgggggg < 1:20092454‑M1/13‑2 (MQ=255) gcccctggataaacttgctctcCAGCGtcgggggg < 1:7062122‑M1/13‑2 (MQ=255) ataattttgccaaccacgattttcGCGtcgggggg < 1:16377498‑M1/11‑2 (MQ=255) ataattttgccaaccacgattttcGCGtcgggggg < 1:8568513‑M1/11‑2 (MQ=255) ataattttgccaaccacgattttcGCGtcgggggg < 1:18671535‑M1/11‑2 (MQ=255) cccctggataaacttgctctcCAGCgtcggggggg < 1:17674231‑M1/14‑3 (MQ=255) ccctggataaacttgctctcCAGcgtcgggggggg < 1:6541698‑M1/15‑4 (MQ=255) accaaatgcaccagcctttTCAGcgtcgggggggg < 1:17395240‑M1/16‑4 (MQ=255) aattttgccaaccacgattttcGcgtcgggggggg < 1:18781573‑M1/13‑4 (MQ=255) aaCGCGGGAAAAGCACTGGTCAGCGTcgggggcgg > 1:5020385/1‑35 (MQ=255) ccaaatgcaccagcctttTCAGCGTcggggggggg < 1:20593097‑M1/17‑1 (MQ=255) ccaaatgcaccagcctttTCAGCGTcggggggggg < 1:17894124‑M1/17‑1 (MQ=255) attttgccaaccacgattttcGCGTcggggggggg < 1:10434952‑M1/14‑1 (MQ=255) attttgccaaccacgattttcGCGTcggggggggg < 1:4952202‑M1/14‑1 (MQ=255) aCGCGGGAAAAGCACTGGTCAGCGTcgggggcggg < 1:7654821/35‑1 (MQ=255) aCGCGGGAAAAGCACTGGTCAGCGTcgggggcggg < 1:5425988/35‑1 (MQ=255) aCGCGGGAAAAGCACTGGTCAGCGTcgggggcggg < 1:19245348/35‑1 (MQ=255) ttttgccaaccacgattttcGCGtcgggggggggt < 1:2148225‑M1/15‑2 (MQ=255) ttttgccaaccacgattttcGCGTcgggggggggg < 1:14713936‑M1/15‑1 (MQ=255) ttttgccaaccacgattttcGCGTcgggggggggg < 1:19819937‑M1/15‑1 (MQ=255) ctggataaacttgctctcCAGCGTcgggggggggg < 1:10799009‑M1/17‑1 (MQ=255) cgcgGGAAAAGCACTGGTCAGCGTcgggggcgggg < 1:14448949/35‑1 (MQ=255) cgcgGGAAAAGCACTGGTCAGAGTcgggggcgggg < 1:3516590/35‑1 (MQ=255) caaatgcaccagcctttTCAGCGTcgggggggggg < 1:8994798‑M1/18‑1 (MQ=255) tttgccaaccacgattttcGCGtcggggggggggt < 1:19099097‑M1/16‑2 (MQ=255) tttgccaaccacgattttcGCGTcggggggggggg < 1:4094026‑M1/16‑1 (MQ=255) tttgccaaccacgattttcGCGTcggggggggggg < 1:7278522‑M1/16‑1 (MQ=255) aaatgcaccagcctttTCAGCGTcggggggggggg < 1:6445589‑M1/19‑1 (MQ=255) cgGGAAAAGCACTGGTCAGCGTcgggggcgggggg > 1:11529836/1‑34 (MQ=255) aatgcaccagcctttTCAGCGtcgggggtgggggg < 1:13009705‑M1/20‑2 (MQ=255) ggAAAAGCACTGGTCAGCGTCGGGGGCGGGGGgat > 1:8100089/1‑35 (MQ=255) gAAAAGCACTGGTCAGCGTCGGGGGCGGGGGtata < 1:19177848/35‑1 (MQ=255) gAAAAGCACTGGTCAGCGTCGGGGGCGGGGGgata > 1:8201132/1‑35 (MQ=255) aaaaGCACTGGTCAGCGTCGGGGGCGGGGGTATaa < 1:16690718/35‑1 (MQ=255) aaaaGCACTGGTCAGCGTCGGGGGCGGGGGGATaa > 1:7918355/1‑35 (MQ=255) aaaGCACTGGTCAGCGTCGGGGGCGGGGGGATAAt > 1:9166935/1‑35 (MQ=255) gCACTGGTCAGCGTCGGGGGCGGGGGTATAATGAc < 1:12684086/35‑1 (MQ=255) cTGGTCAGCGTCGGGGGCGGGGGTATAATGACCAt > 1:11714167/1‑35 (MQ=255) gTCAGCGTCGGGGGCGGGGGTATAATGAACAtttt > 1:15755710/1‑33 (MQ=38) | CTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGCGGGGGTATAATGACCATTCT > REL606/1306295‑1306359 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |