New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3182813 = | 111 (1.080) | 7 (0.110) | 3/30 | NT | 10.7% | coding (97/405 nt) | yqjE | conserved inner membrane protein |
? | REL606 | 4217451 = | 48 (0.750) | coding (886/2097 nt) | yjbH | predicted porin |
Only 100 of 209 total aligned reads displayed.
TGTTTCCATCATGGTTGAAATGGTGGAAACACGTCTGCGGCTGGCGGTGGTTGAGCTGGAAGAGGAAAA > REL606/3182779‑3182847 | tGTTTCCATCATGGTTGAAATGGTGGAAACACGTc > 1:1633572/1‑35 (MQ=255) tGTTTCCATCATGGTTGAAATGGTGGAAACACGTc > 1:15378945/1‑35 (MQ=255) tGTTTCCATCATGGTTGAAATGGTGGAAACACGTc > 1:6743011/1‑35 (MQ=255) tGTTTCCATCATGGTTGAAATGGTGGAAACACGTc < 1:13355024/35‑1 (MQ=255) tGTTTCCATCATGGTTGAAATGGTGGAAACACGTc < 1:3262216/35‑1 (MQ=255) gattcgccaccaccgaatgctgcaaaatggcatcc < 1:16789438‑M1/1‑1 (MQ=255) gTTTCCATCATGGTTGAAATGGTGGAAACACGTCt > 1:10191286/1‑35 (MQ=255) gTTTCCATCATGGTTGAAATGGTGGAAACACGTCt > 1:9168934/1‑35 (MQ=255) gTTTCCATCATGGTTGAAATGGTGGAAACACGTCt > 1:647804/1‑35 (MQ=255) gTTTCCATCATGGTTGAAATGGTGGAAACACGTCt < 1:14484891/35‑1 (MQ=255) gTTTCCATCATGGTTGAAATGGTGGAAACACGCCt > 1:15933956/1‑35 (MQ=255) attcgccaccaccgaatgctgcaaaatggcatcCt < 1:19647158‑M1/2‑1 (MQ=255) attcgccaccaccgaatgctgcaaaatggcatcCt < 1:14281202‑M1/2‑1 (MQ=255) tttCCATCATGGTTGAAATGGTGTAAACACGTCTg > 1:14168477/1‑35 (MQ=255) tttCCATCATGGTTGAAATGGTGGAAACACGTCTg < 1:4181928/35‑1 (MQ=255) ttcgccaccaccgaatgctgcaaaatggcatcCTg < 1:13978718‑M1/3‑1 (MQ=255) ttCCATCATGGTTGAAATGGTGGAAACACGTCTGc < 1:18503775/35‑1 (MQ=255) ttCCATCATGGTTGAAATGGTGGAAACACGTCTGc > 1:19915363/1‑35 (MQ=255) ttCCATCATGGTTGAAATGGTGGAAACACGTCTGc > 1:20009606/1‑35 (MQ=255) tCCATCATGGTTGAAATGGTGGAAACACGTCTGCg < 1:12828943/35‑1 (MQ=255) cgcccccaccgaatgctgcaaaatggcatcCTGCg > 1:5110685‑M1/31‑35 (MQ=255) cgccaccaccgaatgctgcaaaatggcatcCTGCg < 1:1709604‑M1/5‑1 (MQ=255) cgccaccaccgaatgctgcaaaatggcatcCTGCg < 1:12689657‑M1/5‑1 (MQ=255) gcccccaccgaatgctgcaaaatggcatcCTGcgn > 1:11618529‑M1/30‑34 (MQ=255) gccaccacccaatgctgcaaaatggcatcCTGCgg < 1:5762364‑M1/6‑1 (MQ=255) ccATCATGGTTGAAATGGTGGAAACACGTCTGCgg < 1:12166354/35‑1 (MQ=255) catcatGGTTGAAATGGTGGAAACACGTCTGCGGc > 1:6393067/1‑35 (MQ=255) ccccaccgaatgctgcaaaatggcatcCTGCGGCt > 1:8984967‑M1/28‑35 (MQ=255) caccaccgaatgctgcaaaatggcatcCTGCGGCt < 1:14362088‑M1/8‑1 (MQ=255) atcatGGTTGAAATTGTGGAAACACGTCTGCGGCt > 1:16723667/1‑35 (MQ=255) atcatGGTTGAAATGGTGGAAACACGTCTGCGGCt < 1:17289479/35‑1 (MQ=255) atcatGGTTGAAATGGTGGAAACACGTCTGCGGCt > 1:4474398/1‑35 (MQ=255) atcatGGTTGAAATGGTGGAAACACGTCTGCGGCt < 1:11979051/35‑1 (MQ=255) atcatGGTTGAAATGGGGGAAACACGTCTGCGGCt > 1:16637370/1‑35 (MQ=255) tcatGGTTGAAATGGTGGAAACACGTCTGCGGCTg < 1:8196838/35‑1 (MQ=255) tcatGGTTGAAATGGTGGAAACACGTCTGCGGCTg < 1:10246206/35‑1 (MQ=255) accaccgaatgctgcaaaatggcatcCTGCGGCTg > 1:12974149‑M1/27‑35 (MQ=255) accaccgaatgctgcaaaatggcatcCTGCGGCTg > 1:3905925‑M1/27‑35 (MQ=255) ccaccgaatgctgcaaaatggcatcCTGCGGCTgg < 1:9519770‑M1/10‑1 (MQ=255) catGGTTGAAATGGTGGAAACACGTCTGCGGCTgg > 1:10679645/1‑35 (MQ=255) catGGTTGAAATGGTGGAAACACGTCTGCGGCTgg < 1:806663/35‑1 (MQ=255) caccgaatgctgcaaaatggcatcCTGCGGCtggg < 1:15624186‑M1/11‑2 (MQ=255) caccgaatgctgcaaaatggcatcCTGCGGCtggg < 1:14814415‑M1/11‑2 (MQ=255) atGGTTGAAATGGTGGAAACACGTCTGCGGCTGGc < 1:18345703/35‑1 (MQ=255) tGGTTGAAATGGTGGAAACACGTCTGCGGCTgggg > 1:1608255/1‑33 (MQ=255) tGGTTGAAATGGTGGAAACACGTCTGCGGCTGGCn < 1:7472731/35‑1 (MQ=255) tGGTTGAAATGGTGGAAACACGTCTGCGGCTGGCg < 1:7822332/35‑1 (MQ=255) tGGTTGAAATGGTGGAAACACGTCTGCGGCTGGCg < 1:8027679/35‑1 (MQ=255) tGGTTGAAATGGTGGAAACACGTCTGCGGCTGGCg > 1:1213443/1‑35 (MQ=255) accgaatgctgcaaaatggcatcCTGCGGctgggg < 1:16929797‑M1/12‑3 (MQ=255) ggTTGAAATGGTGGAAACACGTCTGCGGCTGGGgg > 1:12511468/1‑35 (MQ=255) ggTTGAAATGGTGGAAACACGTCTGCGGCTGGGgg > 1:2484925/1‑35 (MQ=255) ggTTGAAATGGTGGAAACACGTCTGCGGCTGGCgg > 1:1042873/1‑35 (MQ=255) gTTGAAATGGTGGAAACACGTCTGCGGCTGGGggg > 1:5221235/1‑34 (MQ=255) gTTGAAATGGTGGAAACACGTCTGCGGCTGGGggg > 1:13070697/1‑34 (MQ=255) gTTGAAATGGGGAAAACACGTCTGCGGCTGGCggt < 1:8679794/35‑1 (MQ=25) ttGAAATGGTGGAAACACGTCTGCGGCTGGGgggg > 1:5295589/1‑33 (MQ=37) ttGAAATGGTGGAAACACGTCTGCGGCTGGCggtg < 1:15305407/35‑1 (MQ=255) ttGAAATGGTGGAAACACGTCTGCGGCTGGCggtg < 1:3644736/35‑1 (MQ=255) ttGAAATGGTGGAAACACGTCTGCGGCTGGCggtg < 1:11826721/35‑1 (MQ=255) ttGAAAGGGTGGAAACAAGTCTGCGGCTGGCggtg < 1:11141258/35‑1 (MQ=38) gaatgctgcaaaatggcatcCTGCGGCTggcgcgg < 1:9484261‑M1/15‑4 (MQ=255) gaatgctgcaaaatggcatcCTGCGGCTGGGggtg < 1:17463502‑M1/15‑1 (MQ=255) aatgctgcaaaatggcatcCTGCGGCTGGGggtgg < 1:10915846‑M1/16‑1 (MQ=255) gAAATGGTGGAAACACGTCTGCGGCTGGCggtggt < 1:5214422/35‑1 (MQ=255) gAAATGGTGGAAACACGTCTGCGGCTGGCggtggt < 1:611165/35‑1 (MQ=255) aaaTGGTGGAAACACGTCTGCGGCTGGCGGTGGtt < 1:5011326/35‑1 (MQ=255) aaaTGGTGGAAACACGTCTGCGGCTGGCGGTGGtt < 1:4555407/35‑1 (MQ=255) aaaTGGTGGAAACACGTCTGCGGCTGGCGGTGGtt < 1:15809554/35‑1 (MQ=255) aaTGGTGGAAACACGTCTGCGGCTGGGgggggggg > 1:2731277/1‑32 (MQ=25) aaTGGTGGAAACACGTCTGCGGCTGGGgggggggg > 1:1775386/1‑32 (MQ=25) aTGGTGGAAACACGTCTGCGGCTGGCGGTGGTTGa < 1:3433083/35‑1 (MQ=255) tggtggAAACACGTCTGCGGCTGGCGGTGGTTGAg < 1:8892881/35‑1 (MQ=255) ggtggAAACACGTCTGCGGCTGGCGGTGGTTGAGc < 1:10803969/35‑1 (MQ=255) gtggAAACACGTCTGCGGCTGGCGGTGGTTGAGCt < 1:13060557/35‑1 (MQ=255) gtggAAACACGTCTGCGGCTGGCGGTGGTTGAGCt < 1:55213/35‑1 (MQ=255) tggAAACACGTCTGCGGCTGGTGGTGGTTGAGccg < 1:6049402/35‑3 (MQ=37) tggAAACACGTCTGCGGCTGGCGGTGGTTGAGCTg < 1:3288918/35‑1 (MQ=255) tggAAACACGTCTGCGGCTGGCGGTGGTTGAGCTg < 1:18938790/35‑1 (MQ=255) ggAAACACGTCTGCGGCTGGCGGTGGTTGAGCTgg < 1:10358486/35‑1 (MQ=255) ggAAACACGTCTGCGGCTGGCGGTGGTTGAGCTgg < 1:12819352/35‑1 (MQ=255) ggAAACACGTCTGCGGCTGGCGGTGGTTGAGCTgg < 1:19437495/35‑1 (MQ=255) ggAAACACGTCTACGGCTGGCGGTGGTTGAGCTgg < 1:2911755/35‑1 (MQ=255) gAAGCACGTCTGCGGCTGGCGGTGGTTGAGCTGGa < 1:20597229/35‑1 (MQ=255) aaaCACGTCTGCGGCTGGCGGTGGTTGAGCTGGaa < 1:616783/35‑1 (MQ=255) aaaCACGTCTGCGGCTGGCGGTGGTTGAGCTGGaa < 1:12249335/35‑1 (MQ=255) aaCACGTCTGCGGCTGGCGGTGGTTGAGCTGGAag < 1:1471514/35‑1 (MQ=255) aaCACGTCTGCGGCTGGCGGTGGTTGAGCTGGAag < 1:3160437/35‑1 (MQ=255) aaCACGTCTGCGGCTGGCGGTGGTTGAGCTGGAag < 1:13805336/35‑1 (MQ=255) acacGTCTGCGGCTGGCGGTGGTTGAGCTGGAaga < 1:15708254/35‑1 (MQ=255) cacGTCTGTGGCTGGCGGTGGTTGAGCTGGAagag < 1:11037309/35‑1 (MQ=255) cacGTCTGCGGCTGGCGGTGGTTGAGCTGGAagag < 1:15892090/35‑1 (MQ=255) cacGTCTGCGGCTGGCGGTGGTTGAGCTGGAagag < 1:8353761/35‑1 (MQ=255) cacGTCTGCGGCTGGCGGTGGTTGAGCTGGAagag < 1:6884367/35‑1 (MQ=255) acGTCTGCGGCTGGCGGTGGTTGAGCTGGAAGAgg < 1:7701097/35‑1 (MQ=255) tCTGCGGCTGGCGGTGGTTGAGCTGGAAGAGGaaa < 1:3341176/35‑1 (MQ=255) tCTGCGGCTGGCGGTGGTTGAGCTGGAAGAGGaaa < 1:16808848/35‑1 (MQ=255) tCTGCGGCTGGCGGTGGTTGAGCTGGAAGAGGaaa < 1:5383521/35‑1 (MQ=255) CTGCGGCTGGCGGTGGTTGAGCTGGAAGAGGaaaa > 1:7626004‑M1/1‑35 (MQ=255) CTGCGGCTGGCGGTGGTTGAGCTGGAAGAGGaaaa > 1:15521155‑M1/1‑35 (MQ=255) | TGTTTCCATCATGGTTGAAATGGTGGAAACACGTCTGCGGCTGGCGGTGGTTGAGCTGGAAGAGGAAAA > REL606/3182779‑3182847 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |