New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3944627 = | 101 (0.980) | 9 (0.120) | 3/34 | NT | 13.8% | intergenic (+16/‑131) | proM/aslB | tRNA‑Pro/predicted regulator of arylsulfatase activity |
? | REL606 | = 4275759 | 41 (0.560) | coding (189/690 nt) | yjcO | hypothetical protein |
Only 100 of 121 total aligned reads displayed.
GCGCCAGCAGCGCGCAGGCATCAGCATCACCGCTGTCG‑GCGGCTTTCTGTGCCCAATATTCGGCTTTGC > REL606/4275725‑4275793 | gcgcCAGCAGCGCGCAGGCATCAGCATCACCGCTg > 1:15833509/1‑35 (MQ=255) cgcCAGCAGCGCGCAGGCATCAGCATCACCGCTGt < 1:7913655‑M2/35‑2 (MQ=255) gcCAGCAGCGCGCAGGCATCAGCATCACCGCTGtc < 1:5503254‑M2/35‑3 (MQ=255) gcCAGCAGCGCGCAGGCATCAGCATCACCGCTGtc < 1:9203497‑M2/35‑3 (MQ=255) gcCAGCAGCGCGCAGGCATCAGCATCACCGCTGtc < 1:4822544‑M2/35‑3 (MQ=255) gcCAGCAGCGCGCAGGCATCAGCATCACCGCTGtc < 1:3742075‑M2/35‑3 (MQ=255) gcCAGCAGCGCGCAGGCATCAGCATCACCGCTGtc < 1:3578181‑M2/35‑3 (MQ=255) ccAGCAGCGCGCAGGCATCAGCATCACCGCTGtcg < 1:13094306‑M2/35‑4 (MQ=255) ccAGCAGCGCGCAGGCATCAGCATCACCGCTGtcg > 1:6007488‑M2/1‑32 (MQ=255) cagcagCGCGCAGGCATCAGCATCACCGCTGtcgg < 1:4977977‑M2/35‑5 (MQ=255) cagcagCGCGCAGGCATCAGCATCACCGCTGtcgg < 1:10150317‑M2/35‑5 (MQ=255) cagcagCGCGCAGGCATCAGCATCACCGCTGtcgg < 1:16654756‑M2/35‑5 (MQ=255) cagcagCGCGCAGGCATCAGCATCACAGCTGtcgg < 1:11470032‑M2/35‑5 (MQ=255) agcagcGCGCAGGCATCAGCATCACCGCTGtcggc > 1:13538694‑M2/1‑30 (MQ=255) agcagcGCGCAGGCATCAGCATCACCGCTGtcggc < 1:16218538‑M2/35‑6 (MQ=255) agcagcGCGCAGGCATCAGCATCACCGCTGtcggc < 1:19397260‑M2/35‑6 (MQ=255) agcagcGCGCAGGCATCAGCATCACCGCTGtcggc > 1:11367743‑M2/1‑30 (MQ=255) agcagcGCGCAGGCATCAGCATCACCGCTGtcggc > 1:2839373‑M2/1‑30 (MQ=255) gcagcGCGCATGCATCAGCATCACCGCTGtcggcg < 1:8316812‑M2/35‑7 (MQ=255) gcagcGCGCAGGCATCAGCATCACCGCTGtcggcg > 1:18368063‑M2/1‑29 (MQ=255) gcagcGCGCAGGCATCAGCATCACCGCTGtcggcg < 1:971162‑M2/35‑7 (MQ=255) cagcGCGCAGGCATCAGCATCACCGCTGtcggcgg < 1:18247608‑M2/35‑8 (MQ=255) cagcGCGCAGGCATCAGCATCACCGCTGtcggcgg < 1:2941059‑M2/35‑8 (MQ=255) cagcGCGCAGGCATCAGCATCACCGCTGtcggcgg > 1:10085108‑M2/1‑28 (MQ=255) agcGCGCAGGCATCAGCATCACCGCTGtcggcggg < 1:10252237‑M2/35‑9 (MQ=255) agcGCGCAGGCATCAGCATCACCGCTGTCg‑gcggc < 1:4561493/35‑1 (MQ=255) gcgcgcAGGCATCAGCATCACCGCTGtcggcgggc < 1:19750599‑M2/35‑10 (MQ=255) gcgcgcAGGCATCAGCATCACCGCTGTCG‑GTGGCt > 1:19425487/1‑35 (MQ=255) gcgcgcAGGCATCAGCATCACCGCTGTCG‑GCGGCt < 1:9116906/35‑1 (MQ=255) cgcgcAGGCATCAGCATCACCGCTGtcggcggggt < 1:613562‑M2/35‑11 (MQ=255) cgcgcAGGCATCAGCATCACCGCTGtcggcggggt < 1:19733139‑M2/35‑11 (MQ=255) cgcgcAGGCATCAGCATCACCGCTGTCG‑GCGGCtt < 1:9558538/35‑1 (MQ=255) cgcgcAGGCATCAGCATCACCGCTGTCG‑GCGGCtt < 1:15015779/35‑1 (MQ=255) gcgcAGGCATCAGCATCACCGCTGTCG‑GCGGCttt < 1:4460224/35‑1 (MQ=255) gcgcAGGCATCAGCATCACCGCTGTCG‑GCGGCttt < 1:4080983/35‑1 (MQ=255) gcgcAGGCATCAGCATCACCGCTGTCG‑GCGGCttt < 1:12446213/35‑1 (MQ=255) cgcAGGCATCAGCATCACCGCTGtcggcggggttc < 1:7552102‑M2/35‑13 (MQ=255) cgcAGGCATCAGCATCACCGCTGTCG‑GCGGCTTTc < 1:19871118/35‑1 (MQ=255) cgcAGGCATCAGCATCACCGCTGTCG‑GCGGCTTTc < 1:13586592/35‑1 (MQ=255) cgcAGGCATCAGCATCACCGCTGGCGCGCGGCtgg > 1:5535366/1‑33 (MQ=17) gcAGGCATCAGCATCACCGCTGtcggcgggttttt < 1:17758606‑M2/35‑14 (MQ=255) gcAGGCATCAGCATCACCGCTGtcggcggggtttt < 1:12238301‑M2/35‑14 (MQ=255) gcAGGCATCAGCATCACCGCTGtcggcggggtttt < 1:11225983‑M2/35‑14 (MQ=255) gcAGGCATCAGCATCACCGCTGtcggcggggtttt < 1:13050930‑M2/35‑14 (MQ=255) gcAGGCATCAGCATCACCGCTGtcggcggggttct < 1:19076445‑M2/35‑14 (MQ=255) gcAGGCATCAGCATCACCGCTGtcggcggggttct < 1:13309727‑M2/35‑14 (MQ=255) cAGGCATCAGCATCACCGCTGtcggcggggttttt < 1:7977200‑M2/35‑15 (MQ=255) cAGGCATCAGCATCACCGCTGTCG‑GCGGCTTTCtg < 1:3189897/35‑1 (MQ=255) cAGGCATCAGCATCACCGCTGTCG‑GCGGCTTTCtg < 1:7675445/35‑1 (MQ=255) gggCATCAGCATCACAGCTGTCG‑GCGGCTTTCtgt < 1:14042153/34‑1 (MQ=255) aGGCATCAGCATCACCGCTGtcggcggggtttttt < 1:12885840‑M2/35‑16 (MQ=255) aGGCATCAGCATCACCGCTGtcggcggggtttttt < 1:6409818‑M2/35‑16 (MQ=255) aGGCATCAGCATCACCGCTGtcggcggggttttgt < 1:13747123‑M2/35‑16 (MQ=255) aGGCATCAGCATCACCGCTGTCG‑GCGGGCTTCttg > 1:11988444/1‑33 (MQ=25) aGGCATCAGCATCACCGCTGTCG‑GCGGCTTTCtgt < 1:17486639/35‑1 (MQ=255) aGGCATCAGCATCACCGCTGTCG‑GCGGCTTTCtgt < 1:530337/35‑1 (MQ=255) gcatcagcatcaCCGCTGTCG‑GCGGCTTTCTGTGc < 1:12254904/35‑1 (MQ=255) ccatcagcatcaCCGCTGTCG‑GCGGCTTTCTGTGc < 1:19749082/34‑1 (MQ=255) catcggcatcaCCGCTGTCG‑GCGGCTTTCTGTGcc < 1:20112731/35‑1 (MQ=255) catcagcatcaCCGCTGtcggcggggtttttttgc < 1:11548488‑M2/35‑19 (MQ=255) catcagcatcaCCGCTGTCG‑GCGGCTTTCTGTGcc < 1:19779251/35‑1 (MQ=255) tcaccatcaCCGCTGTCG‑GCGGCTTTCTGTGCCCa < 1:18176771/35‑1 (MQ=255) cagcatcaCCGCTGTCG‑GCGGCTTTCTGTGCCCaa < 1:12126391/35‑1 (MQ=255) agcatcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAat < 1:1849758/35‑1 (MQ=255) agcatcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAat < 1:11978882/35‑1 (MQ=255) agcatcaCCGCTGTCG‑GCGGATTTCTGTGCCCAat < 1:2611759/35‑1 (MQ=255) accatcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAat < 1:20560355/33‑1 (MQ=255) gcatcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAata < 1:17171827/35‑1 (MQ=255) gcatcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAata < 1:11103706/35‑1 (MQ=255) gcatcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAata < 1:179900/35‑1 (MQ=255) cctcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAatat < 1:6268594/33‑1 (MQ=255) catcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAatat < 1:9799602/35‑1 (MQ=255) catcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAatat < 1:19984237/35‑1 (MQ=255) catcaCAGCTGTCG‑GCGGCTTTCTGTGCCCAatat < 1:15502332/35‑1 (MQ=255) atcaCCGCTGTCG‑GCGGGGTTTTTTGCCCCAAAtt > 1:14243621/1‑35 (MQ=2) atcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAATAtt < 1:5446861/35‑1 (MQ=255) atcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAATAtt < 1:18368962/35‑1 (MQ=255) atcaCCGCTGTCG‑GAGGCTTTCTGTGCCCAATAtt < 1:9087340/35‑1 (MQ=255) tccccGCTGTCG‑GCGGCTTTCTGTGCCCAATATTc < 1:574243/32‑1 (MQ=255) tcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAATATTc < 1:4689537/35‑1 (MQ=255) tcaCCGCTGTCG‑GCGGCTTTCTGTGCCCAATATTc < 1:10185902/35‑1 (MQ=255) tcaCCGCTGTCG‑GCGGCTTTCTGTGCACAATATTc < 1:19290155/35‑1 (MQ=255) caCCGCTGTCG‑GCGGCTTTCTGTGCCCAATATTCg < 1:11978717/35‑1 (MQ=255) aCCGCTGTCG‑GCGGCTTTCTGTGCCCAATATTCgg < 1:14793364/35‑1 (MQ=255) ccGCTGTCG‑GCGGCTTTCTGTGCCCAATATTCGGc < 1:12174057/35‑1 (MQ=255) ccGCTGTCG‑GCGGCTTTCTGTGCCCAATATTCGGc < 1:13956420/35‑1 (MQ=255) cagCTGTCG‑GCGGCTTTCTGTGCCCAATATTCGGc < 1:14641163/33‑1 (MQ=255) cGCTGTCG‑GCGGCTTTCTGTGCCCAATATTCGGCt < 1:18539826/35‑1 (MQ=255) cGCTGTCG‑GCGGCTTTCTGTGCCCAATATTCGGCt < 1:900998/35‑1 (MQ=255) cGCTGTCG‑GCGGCTTTCTGTGCCCAATATTAGGCt < 1:5052376/35‑1 (MQ=255) gCTTTCG‑GCGGCTTTCTGTGCCCAATATTCGGCtt < 1:19666840/35‑1 (MQ=255) gCTGTCG‑GCGGCTTTCTGTGCCCAATATTCGGCtt < 1:14579933/35‑1 (MQ=255) gCTGTCG‑GCGGCTTTCTGTGCCCAATATTCGGCtt < 1:11150320/35‑1 (MQ=255) gCTGTCG‑GCGGCTTTCTGTGCCCAATATTCGGCtt < 1:2629922/35‑1 (MQ=255) cTGTCG‑GCGGCTTTCTGTGCCCAATATTCGGCttt < 1:1814355/35‑1 (MQ=255) cTGTCG‑GCGGCTTTCTGTGCCCAATATTCGGCttt < 1:5542822/35‑1 (MQ=255) tGTCG‑GCGGCTTTCTGTGCCCAATATTCGGCTTTg < 1:771166/35‑1 (MQ=255) tGTCG‑GCGGCTTTCTGTGCCCAATATTCGGCTTTg < 1:8280644/35‑1 (MQ=255) tGTCG‑GCGGCTTTCTGTGCCCAATATTCGGCTTTg < 1:11702402/35‑1 (MQ=255) gTCG‑GCGGCTTTCTGTGCCCAATATTCGGCTTTGc < 1:10147977/35‑1 (MQ=255) | GCGCCAGCAGCGCGCAGGCATCAGCATCACCGCTGTCG‑GCGGCTTTCTGTGCCCAATATTCGGCTTTGC > REL606/4275725‑4275793 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |