New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3331631 = | 78 (0.760) | 5 (0.070) | 4/34 | NT | 9.4% | coding (257/975 nt) | yhdH | predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding |
? | REL606 | = 4600665 | 41 (0.560) | coding (36/606 nt) | osmY | periplasmic protein |
ACAAGACTGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGCCGTCGCGACCG > REL606/4600639‑4600699 | aCAAGACTGAAGATTTCGAAAACTCTGCTGGCTGt < 1:1167776/35‑1 (MQ=255) aCAAGACTGAAGATTTCGAAAACTCTGCTGGCTGt < 1:5789434/35‑1 (MQ=255) aCAAGACTGAAGATTTCGAAAACTCTGCTGGCTGt < 1:20384607/35‑1 (MQ=255) aCAAGACTGAAGATTTCGAAAACTATGCTGGCTGt < 1:1682113/35‑1 (MQ=255) cAAGACTGAAGATTTCGAAAACTCTGCTGGCTGTa < 1:4894642/35‑1 (MQ=255) cAAGACTGAAGATTTCGAAAACTCTGCTGGCTGTa < 1:8354685/35‑1 (MQ=255) aaGACTGAAGATTTCGAAAACTCTGCTGGCTGTaa < 1:18675059/35‑1 (MQ=255) aaGACTGAAGATTTCGAAAACTCTGCTGGCTGTaa < 1:3274262/35‑1 (MQ=255) aGACTGAAGATTTCGAAAACTCTGCTGGCTGTAAt < 1:10949660/35‑1 (MQ=255) aGACTGAAGATTTCGAAAACTCTGCTGGCTGTAAt < 1:11793142/35‑1 (MQ=255) aGACTGAAGATTTCGAAAACTCTGCTGGCTGTAAt < 1:17238066/35‑1 (MQ=255) aGACTGAAGATTTCGAAAACTCTGCTGGCTGTAAt < 1:6753967/35‑1 (MQ=255) gACTGAAGATTTCGAAAACTCTGCTGGCTGTAATg < 1:3480192/35‑1 (MQ=255) aCTGAAGATTTCGAAAACTCTGctggctggggtgg < 1:13832297‑M2/35‑14 (MQ=255) aCTGAAGATTTCGAAAACTCTGCTGGCTGGGATGt > 1:1443682/1‑35 (MQ=37) aCTGAAGATTTCGAAAACTATGCTGGCTGTAATGt < 1:17494155/35‑1 (MQ=255) cTGAAGATTTCGAAAACTCTGctggctggggggtt < 1:2823997‑M2/35‑15 (MQ=255) tGAAGATTTCGAAAACTCTGctggctggggggttg < 1:7458817‑M2/35‑16 (MQ=255) tGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTg < 1:1919865/35‑1 (MQ=255) tGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTg < 1:18369297/35‑1 (MQ=255) tGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTg < 1:17888321/35‑1 (MQ=255) tGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTg < 1:19975264/35‑1 (MQ=255) tGAAGATTTCGAAAACTCTGCTGGCTGGGATGttt > 1:15751625/1‑34 (MQ=37) gAAGATTTCGAAAACTCTGctggctggggtgttgt < 1:2733801‑M2/35‑17 (MQ=255) gAAGATTTCGAAAACTCTGctggctggggggttgg < 1:7307249‑M2/35‑17 (MQ=255) gAAGATTTCGAAAACTCTGCTGGCTGTAATGTTGa < 1:16949354/35‑1 (MQ=255) gAAGATTTCGAAAACTCTGCTGGCTGTAATGTTGa < 1:12378360/35‑1 (MQ=255) ctaGATTTCGAAAACTCTGCTGGCTGTAATGTTGa < 1:12134497/33‑1 (MQ=255) aaGATTTCGAAAACTCTGctggctggggcgtcggt < 1:2358331‑M2/35‑18 (MQ=255) aaGATTTCGAAAACTCTGCTGGCTGTAATGTTGAc < 1:1254858/35‑1 (MQ=255) aGATTTCGAAAACTCTGCTGGCTGTAATGTTGAcc < 1:12101567/35‑1 (MQ=255) aGATTTCGAAAACTCTGCTGGCTGTAATGTTGAcc < 1:17971988/35‑1 (MQ=255) aGATTTCGAAAACTCTGCTGGCTGTAATGTTGAcc < 1:752322/35‑1 (MQ=255) aGATTTCGAAAACTCTGCTGGCTGTAATGTTGAcc < 1:2285970/35‑1 (MQ=255) aGATTTCGAAAACTCTGCTGGCTGTAATGTTGAcc < 1:720384/35‑1 (MQ=255) gATTTCGAAAACTCTGCTGGTTGTAATGTTGACct > 1:2470786/1‑35 (MQ=255) gATTTCGAAAACTCTGCTGGCTGTAATGTTGACct < 1:16788042/35‑1 (MQ=255) gATTTCGAAAACTCTGCTGGCTGTAATGTTGACct < 1:715326/35‑1 (MQ=255) aTTTCGAAAACTCTGCTGGCTGTAATGTTGACctc < 1:842854/35‑1 (MQ=255) aTTTCGAAAACTCTGCTGGCTGGGGTGTTGACctc > 1:14019886/1‑35 (MQ=25) aTTTCGAAAACTCTGCTGGCTGGGGTGTTGACctc > 1:2629064/1‑35 (MQ=25) tttCGGAAACTCTGCTGGCTGTAATGTTGACctct < 1:17545415/35‑1 (MQ=255) tttCGAAAACTCTGCTGGCTGTAATGTTGACctct < 1:12992563/35‑1 (MQ=255) tttCGAAAACTCTGCTGGCTGTAATGTTGACctct < 1:8729315/35‑1 (MQ=255) tttCGAAAACTCTGCTGGCTGTAATGTTGACctct < 1:10473981/35‑1 (MQ=255) tCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGc < 1:4315575/35‑1 (MQ=255) tCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGc < 1:11504782/35‑1 (MQ=255) tCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGc < 1:19153715/35‑1 (MQ=255) tCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGc < 1:17828693/35‑1 (MQ=255) tCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGc < 1:144406/35‑1 (MQ=255) cGAAAACTCTGCTGGCTGTAATGTTGACCTCTGcc < 1:3521614/35‑1 (MQ=255) cGAAAACTCTGCTGGCTGTAATGTTGACCTCTGcc < 1:7887023/35‑1 (MQ=255) cGAAAACTCTGCTGGCTGTAATGTTGACCTCTGcc < 1:15761251/35‑1 (MQ=255) gAAAACTCTGCTGGCTGTAATGTTGACCTCTGCCg < 1:19356847/35‑1 (MQ=255) gAAAACTCTGCTGGCTGTAATGTTGACCTCTGCCg < 1:14120680/35‑1 (MQ=255) gAAAACTCTGCTGGCTGTAATGTTGACCTCTGCCg < 1:16526555/35‑1 (MQ=255) aaaaCTCTGCTGGCTGTAATGTTGACCTCTGCCGt < 1:9393165/35‑1 (MQ=255) aaaaCTCTGCTGGCTGTAATGTTGACCTCTGCCGt < 1:2850310/35‑1 (MQ=255) aaaCTCTGCTGGCTGTAATGTTGACCTCTGCCGTc < 1:13961630/35‑1 (MQ=255) aaaCTCTGCTGGCTGTAATGTTGACCTCTGCCGTc < 1:10994496/35‑1 (MQ=255) ctctGCTGGCTGTAATGTTGACCTCTGCCGTcgcg < 1:3016613/35‑1 (MQ=255) tctGCTGGCTGTAATGTTGACCTCTGCCGTCGCGa < 1:7619254/35‑1 (MQ=255) tctGCTGGCTGTAATGTTGACCTCTGCCGTCGCGa < 1:3736776/35‑1 (MQ=255) tgctgGCTGTAATGTTGACCTCTGCCGTCGCGAcc < 1:15001823/35‑1 (MQ=255) tgctgGCTGTAATGTTGACCTCTGCCGTCGCGAcc < 1:12319419/35‑1 (MQ=255) tgctgGCTGTAATGTTGACCTCTGCCGTCGCGAcc < 1:8846103/35‑1 (MQ=255) tgctgGCTGTAATGTTGACCTCTGCCGTCGCGAcc < 1:9363099/35‑1 (MQ=255) gctggctgTAATGTTGACCTCTGCCGTCGCGACCg < 1:14826351/35‑1 (MQ=255) gctggctgTAATGTTGACCTCTGCCGTCGCGACCg < 1:18829323/35‑1 (MQ=255) gctggctgTAATGTTGACCTCTGCCGTCGCGACCg < 1:8704476/35‑1 (MQ=255) | ACAAGACTGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGCCGTCGCGACCG > REL606/4600639‑4600699 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |