New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 4154898 | 72 (0.700) | 7 (0.080) | 5/42 | NT | 8.7% | intergenic (‑261/‑101) | coaA/thrU | pantothenate kinase/tRNA‑Thr |
? | REL606 | 4351442 = | 84 (0.930) | intergenic (+50/‑88) | groEL/yjeI | chaperonin GroEL/hypothetical protein |
Only 100 of 205 total aligned reads displayed.
CAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAG > REL606/4351408‑4351475 | gaaaaagtgttctaatctgccctccgttcggctgg > 1:10742968‑M2/35‑35 (MQ=255) gaaaaagtgtgctaatctgccctccgttcggctgg > 1:9550333‑M2/35‑35 (MQ=255) gaaaaagtgtgctaatctgccctccgttcggctgg > 1:953809‑M2/35‑35 (MQ=255) gaaaaagtgtgctaatctgccctccgttcggctgg > 1:7929560‑M2/35‑35 (MQ=255) gaaaaagtgtgctaatctgccctccgttcggctgg > 1:2699231‑M2/35‑35 (MQ=255) gaaaaagtgtgctaatctgccctccgttcggctgg > 1:14160537‑M2/35‑35 (MQ=255) ctctttgccgtcatccagcagctttttacggctgg > 1:11037933‑M2/35‑35 (MQ=255) cAGAAATAAACAAACCCCCGGGCAGAAATGTCTgg > 1:10146897/1‑35 (MQ=255) cAGAAATAAACAAACCCCCGGGCAGAAATGTCTgg < 1:17765252/35‑1 (MQ=255) aaaaagtgtgctaatctgctctccgttcggctggg > 1:19953655‑M2/34‑35 (MQ=255) aaaaagtgtgctaatctgccctccgttcggctggg > 1:15625991‑M2/34‑35 (MQ=255) aaaaagtgtgctaatctgccctccgttcggctggg > 1:2394914‑M2/34‑35 (MQ=255) aGAAATAAACAAACCCCCGGGCAGAAATGTCTggg < 1:4100302/35‑1 (MQ=255) gAAATAAACAAACCCCCGGGCAGAAATGTCTgggg < 1:17288389/35‑1 (MQ=255) ctttgccgtcatccagcagctttttacggctgggg > 1:626954‑M2/33‑35 (MQ=255) ctggcggcggaagggcatatttttggtggctgggg > 1:14204639‑M2/33‑35 (MQ=255) aaaagtgtgctaatctgccctccgttcggctgggt > 1:3881867‑M2/33‑34 (MQ=255) aaaagtgtgctaatctgccctccgttcggctgggt > 1:12114168‑M2/33‑34 (MQ=255) aaaagtgtgctaatctgccctccgttcggctgggg > 1:314237‑M2/33‑35 (MQ=255) aaaagtgtgctaatctgccctccgttcggctgggg > 1:18848101‑M2/33‑35 (MQ=255) aaagtgtgctaatctgccctccgttcggctggggt > 1:6831891‑M2/32‑34 (MQ=255) aaagtgtgctaatctgccctccgttcggctggggg > 1:6602774‑M2/32‑35 (MQ=255) aaaTAAACAAACCCCCGGGCAGAAATGTCTtgggg > 1:14592627/1‑35 (MQ=255) aaaTAAACAAACCCCCGGGCAGAAATGTCTggggg < 1:12055651/35‑1 (MQ=255) aaaTAAACAAACCCCCGGGCAGAAATGTCTggggg < 1:8934843/35‑1 (MQ=255) ggcggcggaagggcatatttttggtggctgggggg > 1:12195956‑M2/31‑34 (MQ=255) ggcggcggaagggcatatttttggtggctgggggg > 1:16711175‑M2/31‑34 (MQ=255) aagtgtgctaatctgccctccgttcggctggggtt > 1:5410414‑M2/31‑33 (MQ=255) aagtgtgctaatctgccctccgttcggctgGGTGt > 1:15280077‑M2/31‑35 (MQ=255) aagtgtgctaatctgccctccgttcggctgGGGGt > 1:19241495‑M2/31‑35 (MQ=255) tgccgtcatccagcagctttttacggctgGGGGtt > 1:1305428‑M2/30‑35 (MQ=255) tgccgtcatccagcagctttttacggctgGGGGtt > 1:34769‑M2/30‑35 (MQ=255) agtgtgctaatctgccctccgttcggctgGGGTtt > 1:10071096‑M2/30‑35 (MQ=255) tAAACAAACCCCCGGGCAGAAATGTCTGGGGGttt > 1:18586768/1‑35 (MQ=255) tAAACAAACCCCCGGGCAGAAATGTCTGGGGGttt < 1:12016518/35‑1 (MQ=255) tAAACAAACCCCCGGGCAGAAATGTCTGGGGGttt > 1:17209390/1‑35 (MQ=255) gtgtgctaatctgccctccgttcggctgGGTGttt > 1:4646702‑M2/29‑35 (MQ=255) cggcggaagggcatatttttggtggctgGGGGgtt > 1:19443172‑M2/29‑35 (MQ=255) cggcggaagggcatatttttggtggctgGGGGgtt > 1:19740305‑M2/29‑35 (MQ=255) cggcggaagggcatatttttggtggctgGGGGgtt > 1:13421852‑M2/29‑35 (MQ=255) ggcggaagggcatatttttggtggctgGGGGgttt > 1:14316633‑M2/28‑35 (MQ=255) ggcggaagggcatatttttggtggctgGGGGgttt > 1:9153661‑M2/28‑35 (MQ=255) ccgtcatccagcagctttttacggctgGGGGtttt > 1:405141‑M2/28‑35 (MQ=255) ccgtcatccagcagctttttacggctgGGGGtttt > 1:16047544‑M2/28‑35 (MQ=255) aaacaaacCCCCGGGCAGAAATGTCTGGGGGtttt < 1:1384920/35‑1 (MQ=255) gcggaagggcatatttttggtggctgGGGGgtttt > 1:14240486‑M2/27‑35 (MQ=255) cgtcatccagcagctttttacggctgGGGgtttta > 1:755307‑M2/27‑34 (MQ=255) tgctaatctgccctccgttcggctgGGTGTTTTTc > 1:5779491‑M2/26‑35 (MQ=255) tgctaatctgccctccgttcggctgGGGGTTTTTc > 1:7328418‑M2/26‑35 (MQ=255) cggaagggcatatttttggtggctgGGGggttttt > 1:1766910‑M2/26‑34 (MQ=255) acaaacCCCCGGGCAGAAATGTCTGGGGGTTTTTc > 1:12759200/1‑35 (MQ=255) caaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCt < 1:12453575/35‑1 (MQ=255) caaacCCCCGGGCAGAAATGTCTGGGGGGTTTTCt > 1:16401561/1‑35 (MQ=255) aaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCtt < 1:749950/35‑1 (MQ=255) aagggcatatttttggtggctgGGGGTTTTTTttt > 1:2435610‑M2/23‑35 (MQ=255) agggcatatttttggtggctgGGGGTTTTTTtttt > 1:764069‑M2/22‑35 (MQ=255) acCCCCGGGCAGAAATGTCTGGGGGTTTTTCtttt < 1:433980/35‑1 (MQ=255) acCCCCGGGCAGAAATGTCTGGGGGTTTTTCtttt > 1:19581405/1‑35 (MQ=255) acCCCCGGGCAGAAATGTCTGGGGGTTTTTCtttt < 1:8537197/35‑1 (MQ=255) acCCCAGGGCAGAAATGTCTGGGGGTTTTTCtttt < 1:16258250/35‑1 (MQ=255) aatctgccctccgttcggctgGGTGTTTTTCtttt > 1:2005270‑M2/22‑35 (MQ=255) ccagcagctttttacggctgGGGGTTTTTTTTTTg > 1:3740673‑M2/21‑35 (MQ=255) cacccGGGCAGAAATGTCTGGGGGTTTTTCTTTTg < 1:11883228/33‑1 (MQ=255) cccGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGt < 1:1231017/35‑1 (MQ=255) ccGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTc > 1:4976111/1‑35 (MQ=255) ccGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTc < 1:12700336/35‑1 (MQ=255) cGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCa < 1:2772267/35‑1 (MQ=255) cGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCa > 1:8780407/1‑35 (MQ=255) cGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCa < 1:5546740/35‑1 (MQ=255) cGGGCAGAAATATCTGGGGGTTTTTCTTTTGGTCa > 1:6764/1‑35 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt > 1:7083796/1‑35 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt < 1:18095106/35‑1 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt > 1:14740/1‑35 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt < 1:5190495/35‑1 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt < 1:563567/35‑1 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt < 1:19400077/35‑1 (MQ=255) ggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATc < 1:1746997/35‑1 (MQ=255) ggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATc < 1:10430879/35‑1 (MQ=255) ggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATc < 1:11600093/35‑1 (MQ=255) ggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATc < 1:14835781/35‑1 (MQ=255) gCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCt > 1:10326475/1‑35 (MQ=255) gCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCt < 1:16886654/35‑1 (MQ=255) cAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCtt < 1:8299487/35‑1 (MQ=255) aGAAATGTCTGGGGGTTTTTCTTTTGGTCATCttt < 1:5863679/35‑1 (MQ=255) aGAAATGTCTGGGGGTTTTTCTTTTGGTCATCttt > 1:13095439/1‑35 (MQ=255) gAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTc > 1:11832227/1‑35 (MQ=255) gAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTc < 1:14001347/35‑1 (MQ=255) gAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTc > 1:3250585/1‑35 (MQ=255) aaaTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCt < 1:3771860/35‑1 (MQ=255) aaTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTa < 1:705313/35‑1 (MQ=255) aaTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTa < 1:6022165/35‑1 (MQ=255) aaTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTa < 1:4295335/35‑1 (MQ=255) aaTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTa < 1:19120706/35‑1 (MQ=255) aTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAg > 1:997888/1‑35 (MQ=255) tGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGt < 1:19516872/35‑1 (MQ=255) gTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGta > 1:9626487/1‑35 (MQ=255) tCTGTGGGTTTTTCTTTTGGTCATCTTTCTAGtat > 1:15710423/1‑35 (MQ=255) tCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGtat < 1:3678768/35‑1 (MQ=255) tgGGGGTTTTTCTTTTGGTCATCTTTCTAGTATaa > 1:18490513‑M2/3‑35 (MQ=255) tgGGGGTTTTTCTTTTGGTCATCTTTCTAGTATaa > 1:17970720‑M2/3‑35 (MQ=255) | CAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAG > REL606/4351408‑4351475 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |