New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3686160 | 56 (0.540) | 10 (0.160) | 3/30 | NT | 30.3% | coding (402/741 nt) | yiaT | hypothetical protein |
? | REL606 | 4048325 = | 11 (0.170) | coding (224/927 nt) | yihR | predicted aldose‑1‑epimerase |
Only 100 of 624 total aligned reads displayed.
TGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCTGTTATCCAGAACGTCCGCAGCCGCAGAGGCTT > REL606/3686126‑3686194 | tgtgGAATACCGATAGCTCCCCCACCCAGCCGTTG > 1:6026760‑M1/1‑35 (MQ=255) gtgGAATACCGATAGCTCCCCCACCCAGCCGTTGa > 1:11269094‑M1/1‑34 (MQ=255) cGATAGCTCCCCCACCCAGCCGTTGCTGTTATCCa > 1:4681629/1‑35 (MQ=255) cGATAGCCCCCCCCCCCAGCCGTTGCTGTTATCCa < 1:7359730/35‑1 (MQ=25) gATAGCTCCCCCACCCAGCCGTTGCTGTTATCCAg > 1:349134/1‑35 (MQ=255) gATAGCTCCCCCACCCAGCCGTTGCTGTTATCCAg > 1:8152067/1‑35 (MQ=255) cTCCCCCACCCAGCCGTTGCTGTTATCCAGAACGt > 1:6120009/1‑35 (MQ=255) tCCCCCCCCCAGCCGTTGCTGTTATCCAGAACGTc < 1:6766716/35‑1 (MQ=255) tCCCCCCCCCAGCCGTTGCTGTTATCCAGAACGTc < 1:12063569/35‑1 (MQ=255) tCCCCCCCCCAGCCGTTGCTGTTATCCAGAACGTc < 1:12197388/35‑1 (MQ=255) cccccccCCCAGCCGTTGtaggcctgataagacgc < 1:17995873‑M1/34‑18 (MQ=255) cccccCCCCAGCCGTTGtaggcctgataagacgcg < 1:4446339‑M1/35‑19 (MQ=255) cccccCCCCAGCCGTTGtaggcctgataagacgcg < 1:1655315‑M1/35‑19 (MQ=255) cccccCCCCAGCCGTTGCctgatgcgacgctgtgc > 1:581458‑M2/1‑18 (MQ=255) cccccCCCCAGCCGTTGCctgatgcgacgcgtaat > 1:1003579‑M2/1‑18 (MQ=255) ccccCCCCAGCCGTTGgcgatccggttcggccacg < 1:12422903‑M1/35‑20 (MQ=255) ccccCCCCAGCCGTTGgcgatccggttcggccacg < 1:4292959‑M1/35‑20 (MQ=255) ccccCCCCAGCCGTTGCctgatgcgacgcgtaatg > 1:311618‑M2/1‑17 (MQ=255) ccccACCCAGCCGTTGCTGTTATCCAGAACGTccg > 1:18183785/1‑35 (MQ=255) cccccccaGCCGTTGCctgatgcgacgctgtgcgt > 1:16414833‑M2/1‑16 (MQ=255) cccccccaGCCGTTGCctgatgcgacgcgtaatgc > 1:1520610‑M2/1‑16 (MQ=255) ccccccagccGTTGtaggcctgataagacgcgcaa < 1:830383‑M1/32‑22 (MQ=255) cccccagcCGTTGCctgatgcgacgctgtgcgtct > 1:7458274‑M2/3‑14 (MQ=255) cccccagcCGTTGCctgatgcgacgcgtaatgcgt > 1:15926536‑M2/3‑14 (MQ=255) cgccagcCGTTGCctgatgcgacgctgtgcgtctt > 1:17140220‑M2/3‑13 (MQ=255) ccccagCCGTTGgcgatccggttcggccacggaat < 1:15350068‑M1/34‑24 (MQ=255) ccccagCCGTTGgagatccggttcggccacggaat < 1:20506821‑M1/34‑24 (MQ=255) ccccagCCGTTGCctgatgcgacgcgtaatgcgtc > 1:3352112‑M2/2‑13 (MQ=255) ccccagCCGTTGCctgatgcgacgcgtaatgcgtc > 1:16024353‑M2/2‑13 (MQ=255) ccccagCCGTTGCctgatgcgacgcgtaatgcgtc > 1:11479432‑M2/2‑13 (MQ=255) ccccagCCGTTGCctgatgcgacgcgtaatgcgtc > 1:14208247‑M2/2‑13 (MQ=255) cccaGCCGTTGtaggcctgataagacgcgcaagcg < 1:9533212‑M1/35‑25 (MQ=255) cccaGCCGTTGCctgatgcgacgcgtaatgcgtct > 1:8022352‑M2/1‑12 (MQ=255) cccaGCCGTTGCctgatgcgacgcgtaatgcgtct > 1:16673115‑M2/1‑12 (MQ=255) cccaGCCGTTGCctgatgcgacgcgtaatgcgtct > 1:17827781‑M2/1‑12 (MQ=255) ccaGCCGTTGCctgatgcgacgctgtgcgtcttat > 1:2444031‑M2/1‑11 (MQ=255) caGCCGTTGgcgatccggttcggccacggaataag < 1:10503395‑M1/35‑27 (MQ=255) caGCCGTTGCctgatgcgacgcgtaatgcgtctta > 1:17395996‑M2/1‑10 (MQ=255) aGCCGTTGCctgatgcgacgctgtgcgtcttatca > 1:1343445‑M2/1‑9 (MQ=255) aGCCGTTGCctgatgcgacgcgtaatgcgtcttat < 1:5421568‑M2/35‑27 (MQ=255) aGCCGTTGCctgatgcgacgcgtaatgcgtcttat > 1:2950372‑M2/1‑9 (MQ=255) aGCCGTTGCctgatgcgacgcgtaatgcgtcttat > 1:6668951‑M2/1‑9 (MQ=255) gCCGTTGtaggcctgataagacgcgcaagcgtcgc < 1:4011322‑M1/35‑29 (MQ=255) gCCGTTGgcgatccggttcggccacggaataagca > 1:18049984‑M1/1‑7 (MQ=255) gCCGTTGgcgatccggttcggccacggaataagca > 1:13290266‑M1/1‑7 (MQ=255) gCCGTTGCctgatgcgacgcgtaatgcgtcttatc > 1:845169‑M2/1‑8 (MQ=255) ccGTTGtaggcctgataagacgcgcaagcgtcgca < 1:10344514‑M1/35‑30 (MQ=255) ccGTTGtaggcctgataagacgcgcaagcgtcgca < 1:18298466‑M1/35‑30 (MQ=255) ccGTTGgcgatccggttcggccacggaataagcac < 1:3788909‑M1/35‑30 (MQ=255) ccGTTGCctgatgcgacgctgtgcttcttatcagg < 1:5652416‑M2/35‑29 (MQ=255) ccGTTGCctgatgcgacgctgtgcgtcttatcagg > 1:13759564‑M2/1‑7 (MQ=255) ccGTTGCctgatgcgacgctgtgcgtcttatcagg > 1:4525432‑M2/1‑7 (MQ=255) ccGTTGCctgatgcgacgctgtgcgtcttatcagg < 1:15676274‑M2/35‑29 (MQ=255) ccGTTGCctgatgcgacgctgtgcgtcttatcagg > 1:11944117‑M2/1‑7 (MQ=255) ccGTTGCctgatgcgacgctgtgcgtcttatcagg > 1:2811677‑M2/1‑7 (MQ=255) ccGTTGCctgatgcgacgcgtaatgcgtcttatca < 1:643100‑M2/35‑29 (MQ=255) cGTTGgcgatccggttcggccacggaataagcact > 1:19943616‑M1/1‑5 (MQ=255) cGTTGCctgatgcgacgctgtgcgtcttatcaggc < 1:1300178‑M2/35‑30 (MQ=255) cGTTGCctgatgcgacgctgtgcgtcttatcaggc < 1:19054649‑M2/35‑30 (MQ=255) gTTGtaggcctgataagacgcgcaagcgtcgcatc < 1:13690001‑M1/35‑32 (MQ=255) gTTGCctgatgcgacgcgtaatgcgtcttatcagg < 1:14472761‑M2/35‑31 (MQ=255) gTTGCctgatgcgacgcgtaatgcgtcttatcagg > 1:11657467‑M2/1‑5 (MQ=255) ttGtaggcctgataagacgcgcaagcgtcgcatca > 1:17594202‑M1/1‑3 (MQ=255) ttGtaggcctgataagacgcgcaagcgtcgcatca < 1:9244698‑M1/35‑33 (MQ=255) ttGtaggcctgataagacgcgcaagcggcgcatca > 1:20089936‑M1/1‑3 (MQ=255) ttGgcgatccggttcggccacggaataagcacttt < 1:8665287‑M1/35‑33 (MQ=255) ttGgcgatccggttaggccacggaataagcacttt < 1:10268056‑M1/35‑33 (MQ=255) ttGCctgatgcgacgctgtgcgtcttatcaggcct > 1:20426807‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc < 1:19377031‑M2/35‑32 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc > 1:9384337‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc > 1:2629058‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc < 1:15568983‑M2/35‑32 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc > 1:2163620‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc > 1:14789082‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc > 1:14687228‑M2/1‑4 (MQ=255) tGtaggcctgataagacgcgcaagcgtcgcatcag < 1:10657531‑M1/35‑34 (MQ=255) tGtaggcctgataagacgcgcaagcgtcgcatcag < 1:7654976‑M1/35‑34 (MQ=255) tGtaggcctgataagacgcgcaagcgtcgcatcag < 1:6878837‑M1/35‑34 (MQ=255) tGtaggcctgataagacgcgcaagcgtcgcatcag > 1:10106480‑M1/1‑2 (MQ=255) tGtaggcctgataagacgcgcaagcgtcgcatcag > 1:2338853‑M1/1‑2 (MQ=255) tGtaggcctgataagacgcgcaagcgtcgcatcag > 1:19744593‑M1/1‑2 (MQ=255) tGtaggcctgataagacgcgcaagcgtcgcatcag > 1:16786285‑M1/1‑2 (MQ=255) tGtaggcctgataagacgcgcaagcgtcgcatcag < 1:16242097‑M1/35‑34 (MQ=255) tGtaggcctgataagacgcgcaagcgtcgcatcag < 1:14577822‑M1/35‑34 (MQ=255) tGgcgatccggttcggccacggaataagcacttta < 1:4866715‑M1/35‑34 (MQ=255) tGgcgatccggttcggccacggaataagcacttta > 1:966074‑M1/1‑2 (MQ=255) tGCctgatgcgacgcgtaatgcgtcttatcaggcc < 1:7284933‑M2/35‑33 (MQ=255) tGCctgatgcgacgcgtaatgcgtcttatcaggcc < 1:11833382‑M2/35‑33 (MQ=255) tGCctgatgcgacgcgtaatgcgtcttatcaggcc < 1:14932826‑M2/35‑33 (MQ=255) tGCctgatgcgacgcgtaatgcgtcttatcaggcc < 1:14018855‑M2/35‑33 (MQ=255) gtaggcctgataagacgcgcaagcgtcgcatcagg < 1:9854734‑M1/35‑35 (MQ=255) gtaggcctgataagacgcgcaagcgtcgcatcagg < 1:8894330‑M1/35‑35 (MQ=255) gtaggcctgataagacgcgcaagcgtcgcatcagg < 1:18909176‑M1/35‑35 (MQ=255) gtaggcctgataagacgcgcaagcgtcgcatcagg > 1:18735317‑M1/1‑1 (MQ=255) gtaggcctgataagacgcgcaagcgtcgcatcagg < 1:5010139‑M1/35‑35 (MQ=255) gtaggcctgataagacgcgcaagcgtcgcatcagg > 1:12615022‑M1/1‑1 (MQ=255) gCctgatgcgacgctgtgcgtcttatcaggcctac < 1:10893835‑M2/35‑34 (MQ=255) gCctgatgcgacgctgtgcgtcttatcaggcctac < 1:7076129‑M2/35‑34 (MQ=255) gCctgatgcgacgcgtaatgcgtcttatcaggcct < 1:16901007‑M2/35‑34 (MQ=255) gCctgatgcgacgcgtaatgcgtcttatcaggcct > 1:1922724‑M2/1‑2 (MQ=255) | TGTGGAATACCGATAGCTCCCCCACCCAGCCGTTGCTGTTATCCAGAACGTCCGCAGCCGCAGAGGCTT > REL606/3686126‑3686194 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |