New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2789283 | 65 (0.630) | 8 (0.080) | 4/46 | NT | 11.2% | coding (192/1278 nt) | yqcE | predicted transporter |
? | REL606 | 3161174 = | 67 (0.650) | coding (557/1071 nt) | ygjJ | hypothetical protein |
Only 100 of 143 total aligned reads displayed.
CAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAA > REL606/3161140‑3161208 | cAGAACTTAAGCGGCAACTTTCGTTATAGCGTCAc < 1:14708427/35‑1 (MQ=255) cAGAACTTAAGCGGCAACTTTCGTTATAGCGTCAc > 1:3492322/1‑35 (MQ=255) cAGAACTTAAGCGGCAACTTTCGTTATAGCGTCAc > 1:9836135/1‑35 (MQ=255) cAGAACTTAAGCGGCAACTTTCGTTATAGCGTCAc > 1:8327699/1‑35 (MQ=255) cAGAACTTAAGCGGCAACTTTCGTTATAGCGTCAc > 1:1362947/1‑35 (MQ=255) cAGAACTTAAGCGGCAACTTTCGTTATAGCGTCAc < 1:13031941/35‑1 (MQ=255) cAGAACTTAAGCGGCAACTTTCGTTATAGCGTCAc > 1:4791274/1‑35 (MQ=255) cAGAACTTAAGCGGCAACTTTCGTTATAGCGTCAc < 1:875880/35‑1 (MQ=255) aGAACTTAAGCGGCAACTTTCGTTATAGCGTCAcc > 1:10278872/1‑35 (MQ=255) aGAACTTAAGCGGCAACTTTCGTTATAGCGTCAcc > 1:17961708/1‑35 (MQ=255) aGAACTTAAGCGGCAACTTTCGTTATAGCGTCAcc > 1:4644384/1‑35 (MQ=255) aGAACTAAAGCGGCAACTTTCGTTATAGCGTCAcc < 1:4288266/35‑1 (MQ=255) gaccTTAAGCGGCAACTTTCGTTATAGCGTCACcg < 1:14074263/32‑1 (MQ=255) gAACTTAAGCGGCAACTTTCGTTATAGCGTCACcg > 1:846941/1‑35 (MQ=255) gAACTAAAGCGGCAACTTTCGTTATAGCGTCACcg < 1:7487364/35‑1 (MQ=255) aaCTTAAGCGGCAACTTTCGTTATAGCGTCACcgc > 1:9222911/1‑35 (MQ=255) aCTTAAGCGGCAACTTTCGTTATAGCGTCACcgcg > 1:14789593/1‑35 (MQ=255) aCTTAAGCGGCAACTTTCGTTATAGCGTCACcgcg > 1:4991161/1‑35 (MQ=255) aCTTAAGCGGCAACTTTCGTTATAGCGTCACcgcg > 1:12698980/1‑35 (MQ=255) aCTTAAGCGGCAACTTTCGTTATAGCGTCACcgcg > 1:17642791/1‑35 (MQ=255) aCTTAAGCGGCAACTTTCGTTATAGCGTCACcgcg > 1:18656929/1‑35 (MQ=255) cTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGa > 1:5836096/1‑35 (MQ=255) cTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGa > 1:9936979/1‑35 (MQ=255) ttAAGCGGCAACTTTCGTTATAGCGTCACCGCGAc > 1:17431488/1‑35 (MQ=255) tAAGCGGCAACTTTCGTTATAGCGTCACCGCGACt > 1:274217/1‑35 (MQ=255) tAAGCGGCAACTTTCGTTATAGCGTCACCGCGACt > 1:4552902/1‑35 (MQ=255) aGCGGCAACTTTCGTTATAGCGTCACCGCGACTcc > 1:12848877/1‑35 (MQ=255) gCGGCAACTTTCGTTATAGCGTCACCGCGACTCCt > 1:8204090/1‑35 (MQ=255) cGGCAACTTTCGTTATAGCGTCACCGCGACTCCta > 1:11495852/1‑34 (MQ=255) ggCAACTTTCGTTATAGCGTCACCGCGACTCCTGc > 1:2212858/1‑35 (MQ=255) ggCAACTTTCGTTATAGCGTCACCGCGACTCCTGc > 1:4288601/1‑35 (MQ=255) ggCAACTTTCGTTATAGCGTCACCGCGACTCCTGc > 1:16087242/1‑35 (MQ=255) gCAACTTTCGTTATAGCGTCACCGCGACTCCTGcc > 1:3084019/1‑35 (MQ=255) gCAACTTTCGTTATAGCGTCACCGCGACTCCTGcc > 1:14149047/1‑35 (MQ=255) gCAACTTTCGTTATAGCGTCACCGCGACTCCTGcc > 1:15075561/1‑35 (MQ=255) gCAACTTTCGTTATAGCGTCACCGCGACTCCTGcc > 1:12116446/1‑35 (MQ=255) cAACTTTCGTTATAGCGTCACCGCGACTCCTGCCg > 1:14205998/1‑35 (MQ=255) cAACTTTCGTTATAGCGTCACCGCGACTCCTGCCg > 1:18182872/1‑35 (MQ=255) aaCTTTCGTTATAGCGTCACCGCGACTCCTGCCgg > 1:7438603/1‑35 (MQ=255) aaCTTTCGTTATAGCGTCACCGCGACTCCTGCCgg > 1:11856228/1‑35 (MQ=255) aaCTTTCGTTATAGCGTCACCGCGACTCCTGCCgg > 1:15376546/1‑35 (MQ=255) aaCTTTCGTTATAGCGTCACCGCGACTCCTGCCgg > 1:1694479/1‑35 (MQ=255) aaCTTTCGTTATAGCGTCACCGCGACTCCTGCCgg > 1:15489496/1‑35 (MQ=255) cTTTCGTTATAGCGTCACCGCGACTCCTGCCGGAc > 1:520347/1‑35 (MQ=255) cTTTCGTTATAGCGTCACCGCGACTCCTGCCGGAc > 1:10096575/1‑35 (MQ=255) cTTTCGTTATAGCGTCACCGCGACTCCTGCCGGAc > 1:61512/1‑35 (MQ=255) tttCGTTATAGCGTCACCGCGACTCCTGCCGGAca > 1:4437621/1‑35 (MQ=255) ttctttatgccccccCCGCGACTCCTGCCGGAcat < 1:6737546‑M2/20‑1 (MQ=255) ttCGTTATAGCGTCACCGCGACTCCTGCCGGAcat > 1:9091923/1‑35 (MQ=255) tctttatgccccccCCGCGACTCCTGCCGGAcatc < 1:358603‑M2/21‑1 (MQ=255) gTTATAGCGTCACCGCGACTCCTGCCGGAcatcat > 1:19846228/1‑35 (MQ=255) gTTATAGCGTCACCGCGACTCCTGCCGGAcatcat > 1:18207209/1‑35 (MQ=255) ttatcccccccCCGCGACTCCTGCCGGACATCatg < 1:13670509‑M2/24‑1 (MQ=255) ttATAGCGTCACCGCTACTCCTGCCAGACATCatg > 1:4410409/1‑35 (MQ=37) ttATAGCGTCACCGCGACTCCTGCCGGACATCatg > 1:14595829/1‑35 (MQ=255) ttATAGCCCCCCCGCGACTCCTGCAGGACATCatg < 1:19888516/35‑1 (MQ=19) tataGCGTCACCGCGACTCCTGCCGGACATCatga > 1:8868210/1‑35 (MQ=255) tataGCGCCCCCGCGACTCCTGCCGGACATCatga < 1:4097175/35‑1 (MQ=37) cacccccccCCGCGACTCCTGCCGGACATCatgat < 1:20557883‑M2/26‑1 (MQ=255) ataccccccCCGCGACTCCTGCCGGACATCatgat < 1:4630988‑M2/26‑1 (MQ=255) ataGCGTCACCGCGACTCCTGCCGGACATCatgat > 1:7955977/1‑35 (MQ=255) ataGCGTCACCGCGACTCCTGCCGGACATCatgat > 1:8115398/1‑35 (MQ=255) ataGCGTCACCGCGACTCCTGCCGGACATCatgat > 1:9199903/1‑35 (MQ=255) aggccccccCCGCGACTCCTGCCGGACATCatgat < 1:11410107‑M2/26‑1 (MQ=255) tcgcccccCCGCGACTCCTGCCGGACATCatgatg < 1:1979009‑M2/27‑1 (MQ=255) taGCGTCACCGCGACTCCTGCCGGACATCatgatg > 1:14093698/1‑35 (MQ=255) taGCGTCACCGCGACTCCTGCCGGACATCatgatg > 1:17998111/1‑35 (MQ=255) taGCGTCACCGCGACTCCTGCCGGACATCatgatg > 1:15468306/1‑35 (MQ=255) ggccccccCCGCGACTCCTGCCGGACATCatgatg < 1:5549364‑M2/27‑1 (MQ=255) gaccccccCCGCGACTCCTGCCGGACATCatgatg < 1:615801‑M2/27‑1 (MQ=255) agccccccCCGCGACTCCTGCCGGACATCatgatg < 1:14343630‑M2/27‑1 (MQ=255) cccccccCCGCGACTCCTGCCGGACATCAtgatga < 1:14643040‑M2/28‑1 (MQ=255) aGCGTCACCGCGACTCCTGCCGGACATCAtgatga > 1:2389839/1‑35 (MQ=255) aGCGTCACCGCGACTCCTGCCGGACATCAtgatga > 1:5992381/1‑35 (MQ=255) gcccccCCGCGACTCCTGCCGGACATCATGATGaa < 1:11617578‑M2/29‑1 (MQ=255) gCGTCACCGCGACTCCTGCCGGACATCATGATGaa > 1:19372995/1‑35 (MQ=255) gCGTCACCGCGACTCCTGCCGGACATCATGATGaa > 1:185525/1‑35 (MQ=255) gCGTCACCGCGACTCCTGCCGGACATCATGATGaa > 1:6588900/1‑35 (MQ=255) cccccCCGCGACTCCTGCCGGACATCATGATGaaa < 1:13754472‑M2/30‑1 (MQ=255) cccccCCGCGACTACTGCCGGACATCATGATGaaa < 1:6008348‑M2/30‑1 (MQ=255) cGTCACCGCGACTCCTGCCGGACATCATGATGaaa > 1:4986632/1‑35 (MQ=255) cGTCACCGCGACTCCTGCCGGACATCATGATGaaa > 1:18203182/1‑35 (MQ=255) gcccCCGCGACTCCTGCCGGACATCATGATGAAAg < 1:5680410‑M2/31‑1 (MQ=255) gTCACCGCGACTCCTGCCGGACATCAtgatgagat > 1:10071448/1‑32 (MQ=255) gTCACCGCGACTCCTGCCGGACATCATGATGaagg > 1:14128068/1‑33 (MQ=255) tCACCGCGACTCCTGCCGGACATCATGATGaaagc > 1:2143478/1‑35 (MQ=255) ccCCGCGACTCCTGCCGGACATCATGATGAAAGCa < 1:17648253‑M2/33‑1 (MQ=255) cACCGCGACTCCTGCCGGACATCATGATGaaagca > 1:7931935/1‑35 (MQ=255) cACCGCGACTCCTGCCGGACATCATGATGaaagca > 1:17102591/1‑35 (MQ=255) cACCGCGACTCCTGCCGGACATCATGATGaaagca > 1:2800596/1‑35 (MQ=255) cACCGCGACTCCTGCCGGACATCATGATGaaagca > 1:1589281/1‑35 (MQ=255) cCCGCGACTCCTGCCGGACATCATGATGAAAGCaa < 1:769005‑M2/34‑1 (MQ=255) cCCGCGACTCCTGCCGGACATCATGATGAAAGCaa < 1:13135272‑M2/34‑1 (MQ=255) cCCGCGACTCCTGCCGGACATCATGATGAAAGCaa < 1:16792504‑M2/34‑1 (MQ=255) ccGCGACTCCTGCCGGACATCATGATGaaagcaaa < 1:4222685/35‑1 (MQ=255) ccGCGACTCCTGCCGGACATCATGATGaaagcaaa > 1:5360591/1‑35 (MQ=255) ccGCGACTCCTGCCGGACATCATGATGaaagcaaa > 1:13401436/1‑35 (MQ=255) ccGCGACTCCTGCCGGACATCATGATGaaagcaaa < 1:13336659/35‑1 (MQ=255) ccGCGACTCCTGCCGGACATCATGATGaaagcaaa < 1:19391787/35‑1 (MQ=255) ccGCGACTCCTGCCGGACATCATGATGaaagcaaa < 1:16464146/35‑1 (MQ=255) | CAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAA > REL606/3161140‑3161208 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |