New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1076256 | 103 (1.000) | 12 (0.160) | 3/36 | NT | 15.1% | coding (711/2547 nt) | torA | trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit |
? | REL606 | 3800450 = | 58 (0.750) | intergenic (+10/+31) | ECB_03545/yicM | hypothetical protein/predicted transporter |
Only 100 of 238 total aligned reads displayed.
TGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAAGCGAACTGGTGGTGCCCGGATCACGATGTTTATG > REL606/1076222‑1076290 | tgCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA > 1:5942342‑M1/1‑35 (MQ=255) tgCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA > 1:16329841‑M1/1‑35 (MQ=255) tgCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA > 1:9607246‑M1/1‑35 (MQ=255) tgCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA > 1:2789748‑M1/1‑35 (MQ=255) atctgTGGGGCTCCGATTTGCTGAAAAACCAGCAA < 1:11246882‑M1/33‑1 (MQ=255) gCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAAg > 1:12678568/1‑35 (MQ=255) cTGTGGGGCTCCGATTTGCTGAAAAACCAGCAAGc < 1:3752508/35‑1 (MQ=255) tgtgGGGCTCCGATTTGCTGAAAAACCAGCAAGCg > 1:9717155/1‑35 (MQ=255) gtgGGGCTCCGATTTGCTGAAAAACCAGCAAGCGa < 1:4095649/35‑1 (MQ=255) gtgGGGCTCCGATTTGCTGAAAAACCAGCAAGCGa < 1:7756575/35‑1 (MQ=255) ggggCTCCGATTTGCTGAAAAACCAGCAAGCGAAc > 1:15924319/1‑35 (MQ=255) gggCTCCGATTTGCTGAAAAACCAGCAAGCGAACt < 1:14341806/35‑1 (MQ=255) gggCTCCGATTTGCTGAAAAACCAGCAAGCGAACt > 1:13310389/1‑35 (MQ=255) gggCTCCGATTTGCTGAAAAACCAGCAAGCGAACt < 1:8608339/35‑1 (MQ=255) ggCTCCGATTTGCTGAAAAACCAGCAAGCGAACtg < 1:4734822/35‑1 (MQ=255) ggCTCCGATTTGCTGAAAAACCAGCAAGCGAACtg > 1:15622526/1‑35 (MQ=255) gCTCCGATTTGCTGAAAAACCAGCAAGCGAACtgg < 1:4242946/35‑1 (MQ=255) gCTCCGATTTGCTGAAAAACCAGCAAGCGAACtgg < 1:10538090/35‑1 (MQ=255) cTCCGATTTGCTGAAAAACCAGCAAGCGAACtggt > 1:3949624/1‑35 (MQ=255) tCCGATTTGCTGAAAAACCAGCAAGCGAACtggtg > 1:2955574/1‑35 (MQ=255) tCCGATTTGCTGAAAAACCAGCAAGCGAACtggtg > 1:7553539/1‑35 (MQ=255) ccGATTTGCTGAAAAACCAGCAAGCGAACtggtgg > 1:12584216/1‑35 (MQ=255) ccGATTTGCTGAAAAACCAGCAAGCGAACtggtgg < 1:11036282/35‑1 (MQ=255) ccGATTTGCTGAAAAACCAGCAAGCGAACtggtgg < 1:5019296/35‑1 (MQ=255) ccGATTTGCTGAAAAACCAGCAAGCGAACtggtgg > 1:17601832/1‑35 (MQ=255) cGATTTGCTGAAAAACCAGCAAGCGAACTggtggt < 1:9449341/35‑1 (MQ=255) cGATTTGCTGAAAAACCAGCAAGCGAACTggtggt < 1:10788886/35‑1 (MQ=255) cGATTTGCTGAAAAACCAGCAAGCGAACTggtggt > 1:17671562/1‑35 (MQ=255) gATTTGCTGAAAAACCAGCAAGCGAACTGgtggtg > 1:3220862/1‑35 (MQ=255) gATTTGCTGAAAAACCAGCAAGCGAACTGgtggtg < 1:12610928/35‑1 (MQ=255) aTTTGCTGAAAAACCAGCAAGCGAACTGGTGGGGc > 1:6627239/1‑35 (MQ=255) tttGCTGAAAAACCAGCAAGCGAACTGGTGGGGcc > 1:9006424/1‑35 (MQ=255) ttGCTGAAAAACCAGCAAGCGAACTGGTGGTGccc < 1:2338979/35‑1 (MQ=255) tGCTGAAAAACCAGCAAGCGAACTGGTGGTGCCCg > 1:18319025/1‑35 (MQ=255) tGCTGAAAAACCAGCAAGCGAACTGGTGGTGCCCg > 1:14893030/1‑35 (MQ=255) tGCTGAAAAACCAGCAAGCGAACTGGTGGTGCCCg < 1:10842545/35‑1 (MQ=255) tGCTGAAAAACCAGCAAGCGAACTGGTGGTGCCCg < 1:10045209/35‑1 (MQ=255) atatgaaAAACCAGCAAcaactactgaccaacgct < 1:8033077‑M1/32‑19 (MQ=255) gCTGAAAAACCAGCAAGCGAACTGTTGGTGCCCgg > 1:1030422/1‑35 (MQ=255) gCTGAAAAACCAGCAAGCGAACTGGTGGTGCCCgg < 1:8356334/35‑1 (MQ=255) gCTGAAAAACCAGCAAGCGAACTGGGGGTGCCCgg < 1:19689441/35‑1 (MQ=255) cTGAAAAACCAGCAAGCGAACTGGTGGTGCCCGGa < 1:7447074/35‑1 (MQ=255) cTGAAAAACCAGCAAGCGAACTGGTGGTGCCCGGa < 1:20506405/35‑1 (MQ=255) tggaaaaccaGCAAcaactactgaccaacgcttct < 1:16499135‑M1/32‑22 (MQ=255) tGAAAAACCAGCAAGCGAACTGGTGGTGCCCGGAt < 1:14433949/35‑1 (MQ=255) tGAAAAACCAGCAAGCGAACTGGTGGTGCCCGGAt < 1:12362175/35‑1 (MQ=255) gAAAAACCAGCAAGCGAACTGGTGGTGCCCGGATc > 1:10129053/1‑35 (MQ=255) aaaaaacCAGCAAcaactactgaccaacgcttctt < 1:15199926‑M1/34‑23 (MQ=255) aaaaaacCAGCAAcaactactgaccaacgcttatt < 1:18239126‑M1/34‑23 (MQ=255) aaagaCCAGCAAcaactactgaccaacgcttcttt < 1:190103‑M1/35‑24 (MQ=255) aaaaaCCAGCAAGCGAACTGGTGGTGCCCGGATCa < 1:1239506/35‑1 (MQ=255) aaaaaCCAGCAAGCGAACTGGTGGTGCCCGGATCa > 1:19441897/1‑35 (MQ=255) aaaCCAGCAAGCGAACTGGTGGTGCCCGGATCACg < 1:14916090/35‑1 (MQ=255) aaCCAGCAAcaactactgaccaacgcttctttacc < 1:714720‑M1/35‑27 (MQ=255) aaCCAGCAAGCGAACTGGTGGTGCCCGGATCACGa > 1:15372341/1‑35 (MQ=255) aaCCAGCAAGCGAACTGGTGGGGGCCGGGTCACgg > 1:18450155/1‑34 (MQ=21) aaCCAGCAAGCGAACTGGTGGGGCCCGGATCACGa > 1:18167883/1‑35 (MQ=255) aCCAGCAAcaactactgaccaaggcttctttacct < 1:1716449‑M1/35‑28 (MQ=255) aCCAGCAAcaactactgaccaacgcttctttacct < 1:13382962‑M1/35‑28 (MQ=255) aCCAGCAAcaactactgaccaacgcttctttacct < 1:16958685‑M1/35‑28 (MQ=255) aCCAGCAAGCGAACTGGTGGTGCCCGGATCACGAt < 1:15746777/35‑1 (MQ=255) aCCAGCAAGCGAACTGGTGGTGCCCGGATCACGAt < 1:14663691/35‑1 (MQ=255) aCCAGCAAGCGAACTGGTGGTGCCCGGATCACGAt < 1:20147626/35‑1 (MQ=255) aCCAGCAAGCGAACTGGTGGGGCCCGGATCACGAt > 1:2166766/1‑35 (MQ=255) ccAGCAAGCGAACTGGTGGTGCCCGGATCACGATg > 1:7884357/1‑35 (MQ=255) cAGCAAcaactactgaccaacgcttctttacctga < 1:17499727‑M1/35‑30 (MQ=255) aGCAAGCGAACTGGTGGTGCCCGGATCACGATGtt < 1:2206967/35‑1 (MQ=255) aGCAAGCGAACTGGTGGTGCCCGGATCACGATGtt < 1:5472540/35‑1 (MQ=255) aGCAAGCGAACTGGTGGTGCCCGGATCACGATGtt < 1:15502580/35‑1 (MQ=255) aGCAAGCGAACTGGTGGTGCCCGGATCACGATGtt < 1:1181619/35‑1 (MQ=255) gCAAcaactactgaccaacgcttctttacctgata < 1:16195610‑M1/35‑32 (MQ=255) gCAAGCGAACTGGTGGTGCCCGGATCACGATGttt < 1:4944040/35‑1 (MQ=255) gCAAGCGAACTGGTGGTGCCCGGATCACGATGttt < 1:18732932/35‑1 (MQ=255) gCAAGCGAACTGGTGGTGCCCGGATCACGATGttt < 1:2395017/35‑1 (MQ=255) gCAAGCGAACTGGTGGTGCCCGGATCACGATGttt < 1:19262641/35‑1 (MQ=255) gCAAGCGAACTGGTGGGGCCCGGATCACGATGgtt > 1:1395806/1‑35 (MQ=37) caacaactactgaccaacgcttctttacctgatat < 1:16461437‑M1/35‑33 (MQ=255) caacaactactgaccaacgcttctttacctgatat > 1:16736750‑M1/1‑3 (MQ=255) cAAGCGAACTGGTGGTGCCCGGATCACGATGTTTa < 1:15828696/35‑1 (MQ=255) cAAGCGAACTGGTGGTGCCCGGATCACGATGTTTa < 1:4338748/35‑1 (MQ=255) cAAGCGAACTGGTGGTGCCCGGATCACGATGTTTa < 1:4148813/35‑1 (MQ=255) cAAGCGAACTGGTGGTGCCCGGATCACGATGTTTa < 1:8543655/35‑1 (MQ=255) aacaactactgaccaacgcttctttacctgatatc < 1:9827592‑M1/35‑34 (MQ=255) aacaactactgaccaacgcttctttacctgatatc > 1:11900624‑M1/1‑2 (MQ=255) aacaactactgaccaacgcttctttacctgatatc < 1:12232466‑M1/35‑34 (MQ=255) aacaactactgaccaacgcttctttacctgatatc < 1:19166230‑M1/35‑34 (MQ=255) aacaactactgaccaacgcttctttacctgatatc < 1:8964677‑M1/35‑34 (MQ=255) aacaactactgaccaacgcttctttacctgatatc < 1:1399582‑M1/35‑34 (MQ=255) aacaactactgaccaacgcttctttacctgatatc < 1:20058486‑M1/35‑34 (MQ=255) aacaactactgaccaacgcttctttacctgatatc > 1:3701924‑M1/1‑2 (MQ=255) aacaactactgaccaacgcttctttacctgatatc > 1:5314974‑M1/1‑2 (MQ=255) aaGCGAACTGGTGGTGCCCGGATCACGATGttttt > 1:17263967/1‑33 (MQ=255) aaGCGAACTGGTGGTGCCCGGATCACGATGTTTAt > 1:19884725/1‑35 (MQ=255) aaGCGAACTGGTGGTGCCCGGATCACGATGTTTAt > 1:7227400/1‑35 (MQ=255) aaGCGAACTGGTGGTGCCCGGATCACGATGTTTAt > 1:6853156/1‑35 (MQ=255) acaactactgaccaacgcttctttacctgatatca < 1:12954804‑M1/35‑35 (MQ=255) acaactactgaccaacgcttctttacctgatatca < 1:9743474‑M1/35‑35 (MQ=255) aGCGAACTGGTGGTGCCCGGATCACGATGTTTATg < 1:13665906/35‑1 (MQ=255) aGCGAACTGGTGGTGCCCGGATCACGATGTTTATg < 1:7260456/35‑1 (MQ=255) aGCGAACTGGTGGTGCCCGGATCACGATGTTTATg < 1:382381/35‑1 (MQ=255) | TGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAAGCGAACTGGTGGTGCCCGGATCACGATGTTTATG > REL606/1076222‑1076290 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |