New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 447249 = | 84 (0.820) | 18 (0.180) | 5/46 | NT | 17.5% | intergenic (‑21/‑197) | tesB/ybaY | acyl‑CoA thioesterase II/predicted outer membrane lipoprotein |
? | REL606 | 1286712 = | 89 (0.900) | intergenic (+36/‑147) | narI/ECB_01206 | nitrate reductase 1, gamma (cytochrome b(NR)) subunit/hypothetical protein |
CGTTATACTCAACTCACTTTGGCTTGCTGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/447283‑447249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGT > REL606/1286712‑1286745 CGTTATACTCAACTCACTTTGGCTTGCTGCGGCAG > 1:19393917/1‑35 CGTTATACTCAACTCACTTTGGCTTGCTGCGGCAG < 1:4902749/35‑1 CGTTATACTCAACTCACTTTGGCTTGCTGCGGCAG > 1:3669125/1‑35 CGTTATACTCAACTCACTTTGGCTTGCTGCGGCAG > 1:12295548/1‑35 CGTTATACTCAACTCACTTTGGCTTGCTGCGGCAG < 1:7382773/35‑1 CGTTATACTCAACTCACTTTGGCTTGCTGCGGCAG > 1:11461786/1‑35 CGTTATACTCAACTCACTTTGGCTTGCTGCGGCAG > 1:10721883/1‑35 CGTTATACTCAACTCACTTTGGCTTGCTGCGGCAG < 1:20366661/35‑1 GTTATACTCAACTCACTTTGGCTTGCTGCGGCAGG > 1:8794015/1‑35 GTTATACTCAACTCACTTTGGCTTGCTGCGGCAGG > 1:4106054/1‑35 GTTATACTCAACTCACTTTGGCTTGCTGCGGCAGG > 1:4424951/1‑35 TTATACTCAACTCACTTTGGCTTGCTGCGGCCGGc > 1:1108847/1‑34 TTATACTCAACTCACTTTGGCTTGCTGCGGCAGGG > 1:6752842/1‑35 TTATACTCAACTCACTTTGGCTTGCTGCGGCAGGG > 1:5724787/1‑35 TATACTCAACTCACTTTGGCTTGCTGCGGCAGGGT > 1:4199638/1‑35 ATACTCAACTCACTTTGGCTTGCTGCGGCAGGGTT > 1:515354/1‑35 ATACTCAACTCACTTTGGCTTGCTGCGGCAGGGTT > 1:4593894/1‑35 TACTCAACTCACTTTGGCTTGCTGCGGCAGGTTTT > 1:14688577/1‑35 TACTCAACTCACTTTGGCTTGCTGCGGCAGGGTTg > 1:5076293/1‑34 TACTCAACTCACTTTGGCTTGCTGCGGCAGGGTTg > 1:3326994/1‑34 TACTCAACTCACTTTGGCTTGCTGCGGCAGGGTTg > 1:9866277/1‑34 ACTCAACTCACTTTGGCTTGCTGCGGCAGGGTTTT > 1:4583227/1‑35 CTCAACTCACTTTGGCTTGCTGCGGCAGGGTTTTT > 1:11804003/1‑35 CTCAACTCACTTTGGCTTGCTGCGGCAGGGTTGTT > 1:13024001/1‑35 TCAACTCACTTTGGCTTGCTGCGGCAGGGTTTTTT > 1:18590846/1‑35 TCAACTCACTTTGGCTTGCTGCGGCAGGGTTGTTT > 1:9217269/1‑35 TCAACTCACTTTGGCTTGCTGCGGCAGGGGTTTTT > 1:20332040/1‑35 CAACTCACTTTGGCTTGCTGCGGCAGGGTTTTTTg > 1:11313194/1‑34 CAACTCACTTTGGCTTGCTGCGGCAGGGTTTTTTc > 1:16507253/1‑34 CAACTCACTTTGGCTTGCTGCGGCAGGGTTTTTTT > 1:6835280/1‑35 CAACTCACTTTGGCTTGCTGCGGCAGGGTTTTTTT > 1:19445803/1‑35 CAACTCACTTTGGCTTGCTGCGGCAGGGTTGTTTT > 1:6168598/1‑35 AACTCACTTTGGCTTGCTGCGGCAGGGTTTTTTTt > 1:4037790/1‑34 AACTCACTTTGGCTTGCTGCGGCAGGGTTTTTTTt > 1:3030599/1‑34 CTCACTTTGGCTTGCTGCGGCAGGGTTTTTTTtgg > 1:4015481/1‑32 CTCACTTTGGCTTGCTGCGGCAGGGTTTTTTTTTG > 1:16550107/1‑35 CTCACTTTGGCTTGCTGCGGCAGGGTTTTTTTTTG > 1:10662306/1‑35 TCACTTTGGCTTGCTGCGGCAGGGTTTTTTTTTGG > 1:12200993/1‑35 TCACTTTGGCTTGCTGCGGCAGGGTTTTTTTTTGG > 1:18337540/1‑35 gctGGGTTTTTTTATGGGCACGGTGCGGGGTGAGT > 1:4998928/4‑35 GGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGT < 1:17329364/35‑1 GGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGT < 1:6447169/35‑1 GGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGT > 1:12142534/1‑35 GGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGT < 1:20186526/35‑1 GGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGT < 1:9418298/35‑1 CGTTATACTCAACTCACTTTGGCTTGCTGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/447283‑447249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGT > REL606/1286712‑1286745 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |