New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2900731 | 92 (0.900) | 9 (0.110) | 3/40 | NT | 13.3% | coding (82/771 nt) | yqeC | hypothetical protein |
? | REL606 | 4370910 = | 41 (0.480) | intergenic (+97/+173) | glyY/yjeS | tRNA‑Gly/predicted Fe‑S electron transport protein |
CTGACAAACTCTTGTAAACAGAGTTATCCACAGCCTCAGGCTGTAATCTTAATTTCAAAGAAACTTCGC > REL606/4370876‑4370944 | ctGACAAACTCTTGTAAACAGAGTTATCCACAGcc > 1:14503027/1‑35 (MQ=255) ctGACAAACTCTTGTAAACAGAGTTATCCACAGcc > 1:16152302/1‑35 (MQ=255) ctGACAAACTCTTGTAAACAGAGTTATCCACAGcc > 1:6392616/1‑35 (MQ=255) tGACAAACTCTTGTAAACAGAGTTATCCACATCCt > 1:13092456/1‑35 (MQ=255) aCAAACTCTTGTAAACAGAGTTATCCACAGCCTCa > 1:12496792/1‑35 (MQ=255) aCAAACTCTTGTAAACAGAGTTATCCACAGCCTCa > 1:12465185/1‑35 (MQ=255) aCAAACTCTTGTAAACAGAGTTATCCACAGCCTCa > 1:4193749/1‑35 (MQ=255) cAAACTCTTGTAAACAGAGTTATCCACAGCCTCAg > 1:12008267/1‑35 (MQ=255) cAAACTCTTGTAAACAGAGTTATCCACAGCCTCAg > 1:17941109/1‑35 (MQ=255) aaaCTCTTGTAAACAGAGTTATCCACAGCCTCAgg > 1:6276041/1‑35 (MQ=255) aaaCTCTTGTAAACAGAGTTATCCACAGCCTCAgg > 1:1798033/1‑35 (MQ=255) aaCTCTTGTAAACAGAGTTATCCACAGCCTCAGGc > 1:17982936/1‑35 (MQ=255) aaCTCTTGTAAACAGAGTTATCCACAGCCTCAGGc > 1:1629982/1‑35 (MQ=255) aaCTCTTGTAAACAGAGTTATCCACAGCCTCAGGc > 1:10516339/1‑35 (MQ=255) aCTCTTGTAAACAGAGTTATCCACAGCCTCAGGCt > 1:2371651/1‑35 (MQ=255) aCTCTTGTAAACAGAGTTATCCACAGCCTCAGGCt > 1:4602716/1‑35 (MQ=255) aCTCTTGTAAACAGAGTTATCCACAGCCTCAGGCt > 1:7519926/1‑35 (MQ=255) aCTCTTGTAAACAGAGTTATCCACAGCCTCAGGCt > 1:11258654/1‑35 (MQ=255) aCTCTTGTAAACAGAGTTATCCACAGCATCAGGCt < 1:1478261/35‑1 (MQ=255) ctctTGTAAACAGAGTTATCCACAGCCTCAGGCTg > 1:20563472/1‑35 (MQ=255) tctTGTAAACAGAGTTATCCACAGCCTCAGGCTgg > 1:14947289/1‑34 (MQ=255) ctTGTAAACAGAGTTATCCACAGCCTCAGGCTgga > 1:2919288/1‑33 (MQ=255) ctTGTAAACAGAGTTATCCACAGCCTCAGGCTGTa > 1:20028942/1‑35 (MQ=255) tGTAAACAGAGTTATCCACAGCCTCAGGCTGGAAt > 1:2787125/1‑35 (MQ=255) tAAACAGAGTTATCCACAGCCTCAGGCTGGAATCt > 1:4406906/1‑35 (MQ=255) aaaCAGATTTACCCCCAGCCTCAGGCTGTAATCtt < 1:12427220/35‑1 (MQ=25) aaaCAGAGTTATCCACAGCCTCAGGCTGGAATCtt > 1:14863983/1‑35 (MQ=255) aaaCAGAGTTATCCACAGCCTCAGGCTGGAATCtt > 1:1177123/1‑35 (MQ=255) aaaCAGAGTTATCCACAGCCTCAGGCTGGAATCtt > 1:18122637/1‑35 (MQ=255) aaaCAGAGTTATCCACAGCATCAGGCTGTAATCtt < 1:3638277/35‑1 (MQ=255) aaCAGATTTCCCCCCAGCCTCAGGCTGTAATCTTa < 1:8149631/35‑1 (MQ=255) aaCAGAGTTATCCACAGCCTCAGGCTGGAATCttt > 1:5416286/1‑34 (MQ=255) aCAGATTTCCCCCCAGCCTCAGGCTGTAATCTTaa < 1:3435255/35‑1 (MQ=19) aCAGAGTTATCCACAGCCTCAGGCTGTAATCTTaa > 1:9325072/1‑35 (MQ=255) aCAGAGTTATCCACAGCCTCAGGCTGTAATCTTaa > 1:12833530/1‑35 (MQ=255) aCAGAGTTATCCACAGCCTCAGGCTGTAATCTTaa > 1:16356216/1‑35 (MQ=255) aCAGAGTTATCCACAGCCTCAGGCTGGAATCTTaa > 1:9241026/1‑35 (MQ=255) cAGATTTACCCCCAGCCTCAGGCTGTAATCTTAAt < 1:5141942/35‑1 (MQ=25) cAGAGTTATCCACAGCCTCAGGCTGGAATCTTAAt > 1:5742557/1‑35 (MQ=255) cAGAGTTATCCACAGCCTCAGGCTGGAATCTTAAt > 1:14122882/1‑35 (MQ=255) cAGAGTTATCCACAGCCTCAGGCTGGAAACTTCAt > 1:17141675/1‑35 (MQ=25) ggttttccccccagcCTCAGGCTGTAATCTTAAtt < 1:7261011‑M2/20‑1 (MQ=255) ggagTCACCCCCAGCCTCAGGCTGTAATCTTAAtt < 1:15312093/34‑1 (MQ=21) agatttccccccagcCTCAGGCTGTAATCTTAAtt < 1:1322952‑M2/20‑1 (MQ=255) agagTTATCCACAGCCTCAGGCTGTAATCTTAAtt > 1:13061198/1‑35 (MQ=255) agagTTATCCACAGCCTCAGGCTGGAATCTTAAtt > 1:7481743/1‑35 (MQ=255) gagTTATCCACAGCCTCAGGCTGTAATCTTAAttt > 1:6986629/1‑35 (MQ=255) ttttccccccagcCTCAGGCTGTAATCTTAATTTc < 1:6951668‑M2/22‑1 (MQ=255) atttccccccagcCTCAGGCTGTAATCTTAATTTc < 1:9793257‑M2/22‑1 (MQ=255) atttccccccagcCTCAGGCTGTAATCTTAATTTc < 1:2779359‑M2/22‑1 (MQ=255) atttccccccagcCTCAGGCTGTAATCTTAATTTc < 1:1331012‑M2/22‑1 (MQ=255) tttccccccagcCTCAGGCTGTAATCTTAATTTCa < 1:2296185‑M2/23‑1 (MQ=255) tttccccccagcCTCAGGCTGTAATCTTAATTTCa < 1:17567557‑M2/23‑1 (MQ=255) tttacccccagcCTCAGGCTGTAATCTTAATTTCa < 1:3037177‑M2/23‑1 (MQ=255) gTTATCCACAGCCTCAGGCTGTAATCTTAATTTCa > 1:7782870/1‑35 (MQ=255) gTTATCCACAGCCTCAGGCTGGAATCTTAAtttta > 1:11292965/1‑33 (MQ=37) gTTACCCCCAGCCTCAGGCTGTAATCTTAATTTCa < 1:7392229/35‑1 (MQ=25) tacccccagcCTCAGGCTGTAATCTTAATTTCaaa < 1:7674614‑M2/25‑1 (MQ=255) tATCCACAGCCTCAGGCTGTAATCTTTATTTCaaa > 1:6871732/1‑35 (MQ=255) tATCCACAGCCTCAGGCTGGAATCTTAATTTCaaa > 1:13998473/1‑35 (MQ=255) ccccccagcCTCAGGCTGTAATCTTAATTTCAAAg < 1:16662428‑M2/26‑1 (MQ=255) ccccccagcCTCAGGCTGTAATCTTAATTTCAAAg < 1:16732276‑M2/26‑1 (MQ=255) acccccagcCTCAGGCTGTAATCTTAATTTCAAAg < 1:97567‑M2/26‑1 (MQ=255) acccccagcCTCAGGCTGTAATCTTAATTTCAAAg < 1:17509686‑M2/26‑1 (MQ=255) aTCCACAGCCTCAGGCTGGAATCTTTATTTCAAAg > 1:9292065/1‑35 (MQ=37) tCCACAGCCTCAGGCTGTAATCTTAATTTCAAAGa > 1:3846194/1‑35 (MQ=255) cccccagcCTCAGGCTGTAATCTTAATTTCAAAGa < 1:8186920‑M2/27‑1 (MQ=255) cccccagcCTCAGGCTGTAATCTTAATTTCAAAGa < 1:5109541‑M2/27‑1 (MQ=255) ccccagcCTCAGGCTGTAATCTTAATTTCAAAGaa < 1:18180398‑M2/28‑1 (MQ=255) ccccagcCTCAGGCTGTAATCTTAATTTCAAAGaa < 1:7189374‑M2/28‑1 (MQ=255) ccccagcCTCAGGCTGTAATCTTAATTTCAAAGaa < 1:11631308‑M2/28‑1 (MQ=255) ccACAGCCTCAGGCTGTAATCTTAATTTCAAAGaa > 1:1689373/1‑35 (MQ=255) cccagcCTCAGGCTGTAATCTTAATTTCAAAGaaa < 1:385628‑M2/29‑1 (MQ=255) cacaGCCTCAGGCTGGAATCTTAATTTCAAAGaaa > 1:20451268/1‑35 (MQ=255) ccagcCTCAGGCTGTAATCTTAATTTCAAAGAAAc < 1:12059952‑M2/30‑1 (MQ=255) ccagcCTCAGGCTGTAATCTTAATTTCAAAGAAAc < 1:3149275‑M2/30‑1 (MQ=255) ccagcCTCAGGCTGTAATCTTAATTTCAAAGAAAc < 1:12299406‑M2/30‑1 (MQ=255) acaGCCTCAGGCTGTAATCTTAATTTCAAAGAAAc < 1:9250963/35‑1 (MQ=255) cagcCTCAGGCTGTAATCTTAATTTCAAAGAAACt < 1:13905647‑M2/31‑1 (MQ=255) cagcCTCAGGCTGTAATCTTAATTTCAAAGAAACt < 1:13972433‑M2/31‑1 (MQ=255) cagcCTAAGGCTGTAATCTTAATTTCAAAGAAACt < 1:15319638‑M2/31‑1 (MQ=255) caGCCTCAGGCTGTAATCTTAACTTAAAAGAAACt < 1:360640/35‑1 (MQ=38) agcCTCAGGCTGTAATCTTAATTTCAAAGAAACtt > 1:12827926‑M2/4‑35 (MQ=255) agcCTCAGGCTGTAATCTTAATTTCAAAGAAACtt < 1:19604087‑M2/32‑1 (MQ=255) gcCTCAGGCTGTAATCTTAATTTCAAAGAAACTTc < 1:2086155‑M2/33‑1 (MQ=255) cCTCAGGCTGTAATCTTAATTTCAAAGAAACTTCg < 1:4873618‑M2/34‑1 (MQ=255) cCTCAGGCTGTAATCTTAATTTCAAAGAAACTTCg < 1:6677884‑M2/34‑1 (MQ=255) cTCAGGCTGTAATCTTAATTTCAAAGAAACTTCgg < 1:11503750/35‑2 (MQ=255) cTCAGGCTGTAATCTTAATTTCAAAGAAACTTCGc < 1:7790562/35‑1 (MQ=255) cTCAGGCTGTAATCTTAATTTCAAAGAAACTTCGc < 1:18321763/35‑1 (MQ=255) cTCAGGCTGTAATCTTAATTTCAAAGAAACTTCGc < 1:15604065/35‑1 (MQ=255) | CTGACAAACTCTTGTAAACAGAGTTATCCACAGCCTCAGGCTGTAATCTTAATTTCAAAGAAACTTCGC > REL606/4370876‑4370944 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |