New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3944627 = | 101 (0.980) | 9 (0.120) | 3/34 | NT | 13.8% | intergenic (+16/‑131) | proM/aslB | tRNA‑Pro/predicted regulator of arylsulfatase activity |
? | REL606 | = 4275759 | 41 (0.560) | coding (189/690 nt) | yjcO | hypothetical protein |
TGACGAAATGCACAGAAAACAAAAAACCCCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3944661‑3944627 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgaCAGCGGTGATGCTGATGCCTGCGCGCTGCTGGCG < REL606/4275759‑4275726 TGACGAAATGCACAGAAAACAAAAAACCCCGCCGA > 1:15503019/1‑35 TGACGAAATGCACAGAAAACAAAAAACCCCGCCGA > 1:16792549/1‑35 TGACGAAATGCACAGAAAACAAAAAACCCCGCCGA > 1:9221483/1‑35 gcaAAAAAACCCCGCCGACAGCGGTGATGCTGATG < 1:11548488/32‑1 acAAAACCCCGCCGACAGCGGTGATGCTGATGCCT < 1:13747123/33‑1 AAAAAACCCCGCCGACAGCGGTGATGCTGATGCCT < 1:6409818/35‑1 AAAAAACCCCGCCGACAGCGGTGATGCTGATGCCT < 1:12885840/35‑1 AAAAACCCCGCCGACAGCGGTGATGCTGATGCCTG < 1:7977200/35‑1 agAACCCCGCCGACAGCGGTGATGCTGATGCCTGC < 1:13309727/33‑1 agAACCCCGCCGACAGCGGTGATGCTGATGCCTGC < 1:19076445/33‑1 AAAACCCCGCCGACAGCGGTGATGCTGATGCCTGC < 1:12238301/35‑1 AAAACCCCGCCGACAGCGGTGATGCTGATGCCTGC < 1:13050930/35‑1 AAAACCCCGCCGACAGCGGTGATGCTGATGCCTGC < 1:11225983/35‑1 AAAAACCCGCCGACAGCGGTGATGCTGATGCCTGC < 1:17758606/35‑1 gAACCCCGCCGACAGCGGTGATGCTGATGCCTGCG < 1:7552102/34‑1 AACGCCGCCGACAGCGGTGATGCTGATGCCTGCGC < 1:3528345/35‑1 AACGCCGCCGACAGCGGTGATGCTGATGCCTGCGC < 1:1406240/35‑1 ACCCCGCCGACAGCGGTGATGCTGATGCCTGCGCG < 1:613562/35‑1 ACCCCGCCGACAGCGGTGATGCTGATGCCTGCGCG < 1:19733139/35‑1 gCCCGCCGACAGCGGTGATGCTGATGCCTGCGCGC < 1:19750599/34‑1 CCCGCCGACAGCGGTGATGCTGATGCCTGCGCGCT < 1:10252237/35‑1 CCGCCGACAGCGGTGATGCTGATGCCTGCGCGCTG < 1:2941059/35‑1 CCGCCGACAGCGGTGATGCTGATGCCTGCGCGCTG < 1:18247608/35‑1 CCGCCGACAGCGGTGATGCTGATGCCTGCGCGCTG < 1:9137551/35‑1 CCGCCGACAGCGGTGATGCTGATGCCTGCGCGCTG > 1:10085108/1‑35 CGCCGACAGCGGTGATGCTGATGCCTGCGCGCTGC > 1:18368063/1‑35 CGCCGACAGCGGTGATGCTGATGCCTGCGCGCTGC < 1:12080591/35‑1 CGCCGACAGCGGTGATGCTGATGCCTGCGCGCTGC < 1:971162/35‑1 CGCCGACAGCGGTGATGCTGATGCATGCGCGCTGC < 1:8316812/35‑1 GCCGACAGCGGTGATGCTGATGCCTGCGCGCTGCT > 1:987633/1‑35 GCCGACAGCGGTGATGCTGATGCCTGCGCGCTGCT > 1:2839373/1‑35 GCCGACAGCGGTGATGCTGATGCCTGCGCGCTGCT > 1:11367743/1‑35 GCCGACAGCGGTGATGCTGATGCCTGCGCGCTGCT > 1:13538694/1‑35 GCCGACAGCGGTGATGCTGATGCCTGCGCGCTGCT < 1:16218538/35‑1 GCCGACAGCGGTGATGCTGATGCCTGCGCGCTGCT < 1:19397260/35‑1 CCGACAGCTGTGATGCTGATGCCTGCGCGCTGCTG < 1:11470032/35‑1 CCGACAGCGGTGATGCTGATGCCTGCGCGCTGgcg > 1:6548834/1‑32 CCGACAGCGGTGATGCTGATGCCTGCGCGCTGCTG < 1:10150317/35‑1 CCGACAGCGGTGATGCTGATGCCTGCGCGCTGCTG < 1:16654756/35‑1 CCGACAGCGGTGATGCTGATGCCTGCGCGCTGCTG < 1:19584126/35‑1 CCGACAGCGGTGATGCTGATGCCTGCGCGCTGCTG < 1:4977977/35‑1 CGACAGCGGTGATGCTGATGCCTGCGCGCTGCTGG > 1:6007488/1‑35 CGACAGCGGTGATGCTGATGCCTGCGCGCTGCTGG < 1:13094306/35‑1 GACAGCGGTGATGCTGATGCCTGCGCGCTGCTGGC < 1:5503254/35‑1 GACAGCGGTGATGCTGATGCCTGCGCGCTGCTGGC < 1:9203497/35‑1 GACAGCGGTGATGCTGATGCCTGCGCGCTGCTGGC < 1:4822544/35‑1 GACAGCGGTGATGCTGATGCCTGCGCGCTGCTGGC < 1:3742075/35‑1 GACAGCGGTGATGCTGATGCCTGCGCGCTGCTGGC < 1:3578181/35‑1 ACAGCGGTGATGCTGATGCCTGCGCGCTGCTGGCG < 1:7913655/35‑1 ACAGCGGTGATGCTGATGCCTGCGCGCTGCTGGCG < 1:8115334/35‑1 TGACGAAATGCACAGAAAACAAAAAACCCCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3944661‑3944627 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgaCAGCGGTGATGCTGATGCCTGCGCGCTGCTGGCG < REL606/4275759‑4275726 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |