New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 469267 = | 124 (1.210) | 5 (0.060) | 3/42 | NT | 4.9% | coding (26/645 nt) | adk | adenylate kinase |
? | REL606 | 2766488 = | 87 (0.970) | coding (154/480 nt) | ispF | 2‑C‑methyl‑D‑erythritol 2,4‑cyclodiphosphate synthase |
Only 100 of 227 total aligned reads displayed.
ATTTTCGCAATGCGTATCATTCTGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTCAGTTCATC > REL606/469233‑469301 | aTTTTCGCAATGCGTATCATTCTGCTTGGCGCTcc < 1:14978552/35‑1 (MQ=255) aTTTTCGCAATGCGTATCATTCTGCTTGGCGCTcc < 1:15024474/35‑1 (MQ=255) aTTTTCGCAATGCGTATCATTCTGCTTGGCGCTcc < 1:4440256/35‑1 (MQ=255) ttttCGCAATGCGTATCATTCTGCTTGGCGCTCCg > 1:11299017/1‑35 (MQ=255) ttttCGCAATGCGTATCATTCTGCTTGGCGCTCCg < 1:11414384/35‑1 (MQ=255) tccatgcgttgaccgatgcattgcttggcgcggcg < 1:9607184‑M1/2‑1 (MQ=255) tccatgcgttgaccgatgcattgcttggcgcggcg < 1:5759617‑M1/2‑1 (MQ=255) tccatgcattgaccgatgcattgcttggcgcggcg > 1:4548580‑M1/34‑35 (MQ=255) tttCGCAATGCGTATCATTCTGCTTGGCGCTCCgg < 1:16902148/35‑1 (MQ=255) tttCGCAATGCGTATCATTCTGCTTGGCGCTCCgg < 1:12024419/35‑1 (MQ=255) tttCGCAATGCGTATCATTCTGCTTGGCGCTCCgg < 1:13139128/35‑1 (MQ=255) ccatgcgttgaccgatgcattgcttggcgcggcgg < 1:15857273‑M1/3‑1 (MQ=255) ccatgcgttgaccgatgcattgcttggcgcggcgg < 1:8159953‑M1/3‑1 (MQ=255) ccatgcgttgaccgatgcattgcttggcgcggcgg < 1:13047498‑M1/3‑1 (MQ=255) catgcgttgaccgatgcattgcttggcgcggcggg < 1:19941021‑M1/4‑1 (MQ=255) tCGCAATGCGTATCATTCTGCTTGGCGCTCCGGgc < 1:6935569/35‑1 (MQ=255) tCGCAATGCGTATCATTCTGCTTGGCGCTCCGGgc < 1:19881803/35‑1 (MQ=255) atgcgttgaccgatgcattgcttggcgcggcgggg < 1:15994825‑M1/5‑2 (MQ=255) atgcgttgaccgatgcattgcttggcgcggcgggg < 1:2218111‑M1/5‑2 (MQ=255) tgcgttgaccgatgcattgcttggcgcggcggggg < 1:12646957‑M1/6‑3 (MQ=255) gcgttgaccgatgcattgcttggcgcggcggggcg < 1:2048712‑M1/7‑4 (MQ=255) gCAATGCGTATCATTCTGCTTGGCGCTCCGGgcgc > 1:15597091/1‑35 (MQ=255) gCAATGCGTATCATTCTGCTTGGCGCTCCGGgcgc > 1:6004868/1‑35 (MQ=255) cgttgaccgatgcattgcttggcgcggCGGGggcg < 1:2906925‑M1/8‑1 (MQ=255) cAATGCTTATCATTCTGCTTGGCGCTCCGGGcgcg > 1:4797417/1‑35 (MQ=255) cAATGCGTATCATTCTGCTTGGCGCTCCGGGcgcg < 1:13359182/35‑1 (MQ=255) gttgaccgatgcattgcttggcgcggCGGGGGCgg < 1:8746087‑M1/9‑1 (MQ=255) aaTGCGTATCATTCTGCTTGGCGCTCCGGGCGCgg > 1:3639492/1‑35 (MQ=255) aaTGCGTATCATTCTGCTTGGCGCTCCGGGCGCgg > 1:10773909/1‑35 (MQ=255) aaTGCGTATCATTCTGCTTGGCGCTCCGGGCGCgg > 1:2037123/1‑35 (MQ=255) aaTGCGTATCATTCTGCTTGGCGCTCCGGGCGCgg > 1:12594471/1‑35 (MQ=255) aaTGCGTATCATTCTGCTTGGCGCTCCGGGCGCgg > 1:7265356/1‑35 (MQ=255) aTGCGTATCATTCTGCTTGGCGCTCCGGGCGCggg < 1:2762402/35‑1 (MQ=255) aTGCGTATCATTCTGCTTGGCGCTCCGGGCGCggg < 1:18772246/35‑1 (MQ=255) tgaccgatgcattgcttggcgcggCGGCCGCgggg < 1:19522007‑M1/11‑1 (MQ=255) gCGTATCATTCTGCTTGGCGCTCCGGGCGCGGGGa < 1:7763763/35‑1 (MQ=255) cGTATCATTCTGCTTGGCGCTCCGGGCGCGGGGaa > 1:10463625/1‑35 (MQ=255) cGTATCATTCTGCTTGGCGCTCCGGGCGCGGGGaa > 1:8103150/1‑35 (MQ=255) cGTATCATTCTGCTTGGCGCTCCGGGCGCGGGGaa < 1:3547113/35‑1 (MQ=255) gTATCATTCTGCTTGGCGCTCCGGGCGCGGGGaaa > 1:10845364/1‑35 (MQ=255) gTATCATTCTGCTTGGCGCTCCGGGCGCGGGGaaa > 1:4128984/1‑35 (MQ=255) gTATCATTCTGCTTGGCGCTCCGGGCGCGGGGaaa < 1:13482242/35‑1 (MQ=255) gTATCATTCTGCTTGGCGCTCCGGGCGCGGGGaaa > 1:5867279/1‑35 (MQ=255) gTATCATTCTGCCTGGCGCTCCGGGCGCGGGGaaa > 1:18322065/1‑35 (MQ=255) tATCATTCTGCTTGGCGCTCCGGGCGCGGGGAAAg > 1:17128563/1‑35 (MQ=255) tATCATTCTGCTTGGCGCTCCGGGCGCGGGGAAAg > 1:914685/1‑35 (MQ=255) aTCATTCTGCTTGGCGCTCCGGGCGCGGGGAAAgg < 1:3595617/35‑1 (MQ=255) tCATTCTGCTTGGCGCTCCGGGCGCGGGGAAAggg < 1:8956401/35‑1 (MQ=255) tCATTCTGCTTGGCGCTCCGGGCGCGGGGAAAggg < 1:854663/35‑1 (MQ=255) aTTCTGCTTGGCGCTCCGGGCGCGGGGAAAGGGAc < 1:9856233/35‑1 (MQ=255) aTTCTGCTTGGCGCTCCGGGCGCGGGGAAAGGGAc > 1:18007638/1‑35 (MQ=255) aTTCTGCTTGGCGCTCCGGGCGCGGGGAAAGGGAc > 1:17402080/1‑35 (MQ=255) ttCTGCTTGGCGCTCCGGGCGCGGGGAAAGGGACt < 1:15150507/35‑1 (MQ=255) tCTGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTc < 1:11354240/35‑1 (MQ=255) tCTGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTc < 1:7569107/35‑1 (MQ=255) tCTGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTc < 1:3824577/35‑1 (MQ=255) tCTGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTc > 1:7916093/1‑35 (MQ=255) cTGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTCa > 1:8491009/1‑35 (MQ=255) cTGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTCa < 1:15568403/35‑1 (MQ=255) cTGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTCa > 1:53530/1‑35 (MQ=255) tGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTCAg > 1:16530482/1‑35 (MQ=255) tGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTCAg < 1:9338552/35‑1 (MQ=255) tGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTCAg < 1:6352363/35‑1 (MQ=255) tGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTCAg > 1:9167887/1‑35 (MQ=255) gCTTGGCGCTCCGGGCGCGGGGAAAGGGACTCAgg > 1:8278036/1‑35 (MQ=255) cTTGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGc > 1:3283863/1‑35 (MQ=255) cTTGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGc > 1:6175582/1‑35 (MQ=255) ttGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGCt > 1:15453006/1‑35 (MQ=255) ttGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGCt > 1:6575302/1‑35 (MQ=255) ttGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGCt > 1:19095578/1‑35 (MQ=255) tGGCGCTCCGGGCGCGGGGAAAGTGACTCAGGCTc > 1:12817651/1‑35 (MQ=255) tGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTc < 1:7736197/35‑1 (MQ=255) tGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTc < 1:13851696/35‑1 (MQ=255) tGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTc > 1:17375676/1‑35 (MQ=255) tGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTc < 1:14162307/35‑1 (MQ=255) tGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTc < 1:9287977/35‑1 (MQ=255) ggCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTCa < 1:6860753/35‑1 (MQ=255) ggCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTCa < 1:11758708/35‑1 (MQ=255) ggCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTCa > 1:1035539/1‑35 (MQ=255) ggCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTCa > 1:19707164/1‑35 (MQ=255) ggCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTCa < 1:4620153/35‑1 (MQ=255) gcgcTCCGGGCGCGGGGAAAGGGACTCAGGCTCAg > 1:19396329/1‑35 (MQ=255) gcgcTCCGGGCGCGGGGAAAGGGACTCAGGCTCAg < 1:19156224/35‑1 (MQ=255) cgcTCCGGGCGCGGGGAAAGGGACTCAGGCTCAGt < 1:19804310/35‑1 (MQ=255) cgcTCCGGGCGCGGGGAAAGGGACTCAGGCTCAGt < 1:11593600/35‑1 (MQ=255) gcTCCGGGCGCGGGGAAAGGGACTCAGGCTCAGtt > 1:14320736/1‑35 (MQ=255) gcTCCGGGCGCGGGGAAAGGGACTCAGGCTCAGtt > 1:17020633/1‑35 (MQ=255) gcTCCGGGCGCGGGGAAAGGGACTCAGGCTCAGtt > 1:409911/1‑35 (MQ=255) gcTCCAGGCGCGGGGAAAGGGACTCAGGCTCAGtt < 1:15523650/35‑1 (MQ=255) cTCCGGGCGCGGGGAAAGGGACTCAGGCTCAGTtc < 1:19381161/35‑1 (MQ=255) cTCCGGGCGCGGGGAAAGGGACTCAGGCTCAGTtc < 1:1851367/35‑1 (MQ=255) cTCCGGGCGCGGGGAAAGGGACTCAGGCTCAGTtc < 1:4324478/35‑1 (MQ=255) tCCGGGCGCGGGGAAAGGGACTCAGGCTCAGTtca > 1:17808667/1‑35 (MQ=255) tCCGGGCGCGGGGAAAGGGACTCAGGCTCAGTtca < 1:13672548/35‑1 (MQ=255) tCCGGGCGCGGGGAAAGGGACTCAGGCTCAGTtca < 1:20204362/35‑1 (MQ=255) ccGGGCGCGGGGAAAGGGACTCAGGCTCAGTtcat < 1:12348266/35‑1 (MQ=255) ccGGGCGCGGGGAAAGGGACTCAGGCTCAGTtcat < 1:11251832/35‑1 (MQ=255) ccGGGCGCGGGGAAAGGGACTCAGGCTCAGTtcat < 1:5824564/35‑1 (MQ=255) CGGGCGCGGGGAAAGGGACTCAGGCTCAGTtcatc > 1:19913326‑M1/1‑35 (MQ=255) CGGGCGCGCGGAAAGGGACTCAGGCTCAGTtcatc < 1:7095743‑M1/35‑1 (MQ=255) | ATTTTCGCAATGCGTATCATTCTGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTCAGTTCATC > REL606/469233‑469301 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |