Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 4,613,019 | +TT :: IS150 (+) | 100% | intergenic (‑16/‑91) | smp ← / → serB | hypothetical protein/3‑phosphoserine phosphatase |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 664686 = | NA (NA) | 139 (1.350) | 45/48 | NT | 100% | intergenic (‑77/‑49) | gltL/insJ‑2 | ATP‑binding protein of glutamate/aspartate transport system; b0652_1/IS150 hypothetical protein |
? | REL606 | = 4613019 | 0 (0.000) | intergenic (‑16/‑90) | smp/serB | hypothetical protein/3‑phosphoserine phosphatase | |||||
* | ? | REL606 | = 3894996 | NA (NA) | 114 (1.160) | 38/46 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | 4613020 = | 0 (0.000) | intergenic (‑17/‑89) | smp/serB | hypothetical protein/3‑phosphoserine phosphatase |
Only 100 of 194 total aligned reads displayed.
ATTTCATCGTCCAACAAAATGGGTGCAGTACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/664719‑664686 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCAAAGGGTGGAAGATGGCTCGCACAAAACTG < REL606/4613019‑4612986 ATTTCATCGTCCAACAAAATGGGTGCAGTACAAAT > 1:19526277/1‑35 ATTTCATCGTCCAACAAAATGGGTGCAGTACAAAT < 1:13915807/35‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACAAAT < 1:5702173/35‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACAAAT > 1:5401886/1‑35 ATTTCATCGTCCAACAAAATGGGTGCAGTACAAAT < 1:1816326/35‑1 TTTCATCGTCCAACAAAATGGGTGCAGTATAAATT < 1:14334810/35‑1 TTTCATCGTCCAACAAAATGGGTGCAGTACACATg < 1:12223212/35‑2 TTTCATCGTCCAACAAAATGGGTGCAGTACAAATT < 1:4597884/35‑1 TTTCATCGTCCAACAAAATGGGTGCAGTACAAATT > 1:10681655/1‑35 TTTCATCGTCCAACAAAATGGGTGCAGTACAAATT > 1:10090653/1‑35 TTTCATCGTCCAACAAAATGGGTGCAGTACAAATT < 1:18946184/35‑1 TTCATCGTCCAACAAAATGGGTGCAGTACAAATTT < 1:4089923/35‑1 TTCATCGTCCAACAAAATGGGTGCAGTACAAATTT > 1:9416534/1‑35 TTCATCGTCCAACAAAATGGGTGCAGTACAAATTT > 1:9627609/1‑35 TTCATCGTCCAACAAAATGGGTGCAGTACAAATTT > 1:6331747/1‑35 TCATCGTCCAACAAAATGGGTGCAGTACAAATTTC < 1:14768487/35‑1 TCATCGTCCAACAAAATGGGTGCAGTACAAATTTC < 1:13552865/35‑1 TCATCGTCCAACAAAATGGGTGCAGTACAAATTTC < 1:10061756/35‑1 CATCGTCCTACAAAATGGGTGCAGTACAAATTTCA < 1:16788433/35‑1 CATCGTCCAACAAAATGGGTGCAGTACAAATTTCA < 1:11482850/35‑1 CATCGTCCAACAAAATGGGTGCAGTACAAATTTCA < 1:9306884/35‑1 CATCGTCCAACAAAATGGGTGCAGTACAAATTTCA < 1:12650597/35‑1 ATCGTCCAACAAAATGGGTGCAGTACAAATTTCAA < 1:6231960/35‑1 ATCGTCCAACAAAATGGGTGCAGTACAAATTTCAA < 1:6694722/35‑1 ATCGTCCAACAAAATGGGTGCAGTACAAATTTCAA > 1:3003347/1‑35 ATCGTCCAACAAAATGGGTGCAGTACAAATTTCAA < 1:11821936/35‑1 TCGTCCAACAAAATGGGTGCAGTACAAATTTCAAA < 1:17179285/35‑1 TCGTCCAACAAAATGGGTGCAGTACAAATTTCAAA < 1:4486104/35‑1 TCGTCCAACAAAATGGGTGCAGTACAAATTTCAAA > 1:2690236/1‑35 TCGTCCAACAAAATGGGTGCAGTACAAATTTCAAA < 1:13444080/35‑1 CGTCCAACAAAATGGGTGCAGTACAAATTTCAAAG > 1:19041707/1‑35 CGTCCAACAAAATGGGTGCAGTACAAATTTCAAAG < 1:15326868/35‑1 CGTCCAACAAAATGGGTGCAGTACAAATTTCAAAG < 1:17383977/35‑1 GTCCAACAAAATGGGTGCAGTACAAATTTCAAAGG > 1:16094141/1‑35 TCCAACAAAATGGGTGCAGTACAAATTTCAAAGGG < 1:7285970/35‑1 TCCAACAAAATGGGTGCAGTACAAATTTCAAAGGG > 1:17596520/1‑35 TCCAACAAAATGGGTGCAGTACAAATTTCAAAGGG > 1:14021984/1‑35 CCAACAAAATGGGTGCAGTACAAATTTCAAAGGGT > 1:5859062/1‑35 CCAACAAAATGGGTGCAGTACAAATTTCAAAGGGT < 1:19221906/35‑1 CAACAAAATGGGTGCAGTACAAATTTCAAAGGGTG > 1:18066957/1‑35 CAACAAAATGGGTGCAGTACAAATTTCAAAGGGTG < 1:3838957/35‑1 CAACAAAATGGGTGCAGTACAAATTTCAAAGGGTG > 1:16710471/1‑35 CAACAAAATGGGTGCAGTACAAATTTCAAAGGGTG < 1:7788120/35‑1 AACAAAATGGGTGCAGTACAAATTTCAAAGGGTGa < 1:14284545/35‑2 AACAAAATGGGTGCAGTACAAATTTCAAAGGGTGG > 1:3553819/1‑35 AACAAAATGGGTGCAGTACAAATTTCAAAGGGTGG < 1:12481385/35‑1 AACAAAATGGGTGCAGTACAAATTTCAAAGGGTGG < 1:609149/35‑1 ACAAAATGGGTGCAGTACAAATTTCAAAGGGTGGA < 1:1831097/35‑1 CAAAATGGGTGCAGTACAAATTTCAAAGGGTGGAA > 1:17684854/1‑35 CAAAATGGGTGCAGTACAAATTTCAAAGGGTGGAA < 1:1790061/35‑1 CAAAATGGGTGCAGTACAAATTTCAAAGGGTGGAA < 1:1547994/35‑1 CAAAATGGGTGCAGTACAAATTTCAAAGGGTGGAA < 1:20095759/35‑1 AAAATGGGTGCAGTACAAATTTCAAAGGGTGGAAG > 1:14615038/1‑35 AAATGGGTGCAGTACAAATTTCAAAGGGTGGAAGA > 1:4971545/1‑35 AAATGGGTGCAGTACAAATTTCAAAGGGTGGAAGA < 1:9813226/35‑1 AAATAGGTGCAGTACAAATTTCAAAGGGTGGAAGA < 1:5584802/35‑1 AATGGGTGCAGTACAAATTTCAAAGGGTGGAAGAT < 1:10006959/35‑1 AATGGGTGCAGTACAAATTTCAAAGGGTGGAAGAT > 1:13060475/1‑35 AATGGGTGCAGTACAAATTTCAAAGGGTGGAAGAT > 1:18662530/1‑35 ATGGGTGCAGTACAAATTTCAAAGGGTGGAAGATG < 1:835056/35‑1 ATGGGTGCAGTACAAATTTCAAAGGGTGGAAGATG > 1:5268660/1‑35 ATGGGTGCAGTACAAATTTCAAAGGGTGGAAGATG > 1:14973647/1‑35 ATGGGTGCAGTACAAATTTCAAAGGGTGGAAGATG > 1:4054069/1‑35 ATGGGTGCAGTACAAATTTCAAAGGGTGGAAGATG < 1:19502128/35‑1 TGGGTGCAGTACAAATTTCAAAGGGTGGAAGATGG < 1:6591613/35‑1 TGGGTGCAGTACAAATTTCAAAGGGTGGAAGATGG > 1:14253009/1‑35 TGGGTGCAGTACAAATTTCAAAGGGTGGAAGATGG < 1:4820886/35‑1 TGGGTGCAGTACAAATTTCAAAGGGTGGAAGATGG < 1:16630045/35‑1 TGGGTGCAGTACAAATTTCAAAGGGTGGAAGATGG < 1:19117665/35‑1 TGGGTGCAGTACAAATTTCAAAGGGTGGAAGATGG < 1:2962519/35‑1 GGGTGCAGTACAAATTTCAAAGGGTGGAAGATGGC < 1:12338061/35‑1 GGGTGCAGTACAAATTTCAAAGGGTGGAAGATGGC < 1:1803311/35‑1 GGTGCAGTACAAATTTCAAAGGGTGGAAGATGGCT < 1:7211533/35‑1 GGTGCAGTACAAATTTCAAAGGGTGGAAGATGGCT < 1:201972/35‑1 GTGCAGTACAAATTTCAAAGGGTGGAAGATGGCTC < 1:7460581/35‑1 GTGCAGTACAAATTTCAAAGGGTGGAAGATGGCTC > 1:3290360/1‑35 TGCAGTACAAATTTCAAAGGGTGGAAGATGGCTCG < 1:7735339/35‑1 TGCAGTACAAATTTCAAAGGGTGGAAGATGGCTCG < 1:1750036/35‑1 TGCAGTACAAATTTCAAAGGGTGGAAGATGGCTCG < 1:6795114/35‑1 TGCAGTACAAATTTCAAAGGGTGGAAGATGGCTCG > 1:15672076/1‑35 TGCAGTACAAATTTCAAAGGGTGGAAGATGGCTCG < 1:3511611/35‑1 GCAGTACAAATTTCAAAGGGTGGAAGATGGCTCGC > 1:15954720/1‑35 CAGTACAAATTTCAAAGGGTGGAAGATGGCTCGCA > 1:3732767/1‑35 CAGTACAAATTTCAAAGGGTGGAAGATGGCTCGCA > 1:7665179/1‑35 CAGTACAAATTTCAAAGGGTGGAAGATGGCTCGCA > 1:2562420/1‑35 AGTACAAATTTCAAAGGGTGGAAGATGGCTCGCAC < 1:317460/35‑1 AGTACAAATTTCAAAGGGTGGAAGATGGCTCGCAC > 1:10892625/1‑35 GTACAAATTTCAAAGGGTGGAAGATGGCTCGCACA < 1:2171325/35‑1 TACAAATTTCAAAGGGTGGAAGATGGCTCGCACAA < 1:14194920/35‑1 TACAAATTTCAAAGGGTGGAAGATGGCTCGCACAA > 1:10487688/1‑35 gCAAATTTCAAAGGGTGGAAGATGGCTCGCACAAA > 1:14605698/2‑35 ACAAATTTCAAAGGGTGGAAGATGGCTCGCACAAA > 1:12884200/1‑35 ACAAATTTCAAAGGGTGGAAGATGGCTCGCACAAA < 1:13295089/35‑1 ACAAATTTCAAAGGGTGGAAGATGGCTCGCACAAA < 1:14920163/35‑1 ACAAATTTCAAAGGGTGGAAGATGGCTCGCACAAA < 1:11069007/35‑1 AAATTTCAAAGGGTGGAAGATGGCTCGCACAAAAC > 1:351430/1‑35 AAATTTCAAAGGGTGGAAGATGGCTCGCACAAAAC < 1:8259346/35‑1 AATTTCAAAGGGTGGAAGATGGCTCGCACAAAACT > 1:19283449/1‑35 AATTTCAAAGGGTGGAAGATGGCTCGCACAAAACT > 1:20580043/1‑35 ATTTCAAAGGGTGGAAGATGGCTCGCACAAAACTG < 1:11190466/35‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/664719‑664686 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCAAAGGGTGGAAGATGGCTCGCACAAAACTG < REL606/4613019‑4612986 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |