New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2966042 = | 52 (0.510) | 5 (0.060) | 3/36 | NT | 9.1% | coding (1345/1992 nt) | tktA | transketolase 1, thiamin‑binding |
? | REL606 | 3780481 = | 61 (0.790) | coding (513/1359 nt) | ECB_03520 | conserved hypothetical protein |
Only 100 of 141 total aligned reads displayed.
TTCCAAAATCTGAACGTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTCTATCGGTGCAATGCTTG > REL606/3780447‑3780515 | ttCCAAAATCTGAACGTCCTGTTGCTGctggctgg < 1:10129611/35‑1 (MQ=255) ttCCAAAATCTGAACGTCCTGTTGCTGctggctgg < 1:6636380/35‑1 (MQ=255) gtggaatacgcacgtaacgccgtacgtatggctgg > 1:13892638‑M2/35‑35 (MQ=255) gtggaatacgcacgtaacgccgtacgtatggctgg > 1:7099526‑M2/35‑35 (MQ=255) gtggaatacgcacgtaacgccgtacgtatggctgg > 1:6757410‑M2/35‑35 (MQ=255) acaatactgaagatttcgaaaactCTGctggctgg < 1:12195037‑M1/11‑1 (MQ=255) acaagactgaagatttcgaaaactCTGctggctgg < 1:14388216‑M1/11‑1 (MQ=255) acaagactgaagatttcgaaaactCTGctggctgg < 1:4027112‑M1/11‑1 (MQ=255) acaagactgaagatttcgaaaactCTGctggctgg < 1:6886282‑M1/11‑1 (MQ=255) acaagactgaagatttcgaaaactCTGctggctgg < 1:8659950‑M1/11‑1 (MQ=255) tggaatacgcacgtaacgccgtacgtatggctggg > 1:17471403‑M2/34‑35 (MQ=255) tCCAAAATCTGAACGTCCTGTTGCTGCTGGCTggg > 1:4657975/1‑35 (MQ=255) tCCAAAATCTGAACGTCCTGTTGCTGCTGGCTggg > 1:16927028/1‑35 (MQ=255) caagactgaagatttcgaaaactCTGCTGGCTggg < 1:1064342‑M1/12‑1 (MQ=255) caagactgaagatttcgaaaactCTGCTGGCTggg < 1:16103941‑M1/12‑1 (MQ=255) ggaatacgcacgtaacgccgtacgtatggctgggg > 1:13202272‑M2/33‑34 (MQ=255) ggaatacgcacgtaacgccgtacgtatggctgGGc > 1:2392042‑M2/33‑35 (MQ=255) ccAAAATCTGAACGTCCTGTTGCTGCTGGCTgggg > 1:8516916/1‑34 (MQ=255) ccAAAATCTGAACGTCCTGTTGCTGCTGGCTgggg > 1:7658458/1‑34 (MQ=255) ccAAAATCTGAACGTCCTGTTGCTGCTGGCTGGGc < 1:4417159/35‑1 (MQ=255) ccAAAATCTGAACGTCCTGTTGCTGCTGGCTGGGc < 1:4773150/35‑1 (MQ=255) aagactgaagatttcgaaaactCTGCTGGCtgggg < 1:15984954‑M1/13‑2 (MQ=255) aagactgaagatttcgaaaactCTGCTGGCtgggg < 1:18277884‑M1/13‑2 (MQ=255) aagactgaagatttcgaaaactCTGCTGGCtgggg < 1:12403167‑M1/13‑2 (MQ=255) aagactgaagatttcgaaaactCTGCTGGCtggga < 1:13042625‑M1/13‑2 (MQ=255) gaatacgcacgtaacgccgtacgtatggctggggg > 1:7525857‑M2/32‑33 (MQ=255) cAAAATCTTAACGTCCTGTTGCTGCTGGCTGGGCg > 1:4318104/1‑35 (MQ=255) agactgaagatttcgaaaactCTGCTGGctggggt < 1:20261910‑M1/14‑3 (MQ=255) gactgaagatttcgaaaactCTGCTGgctggggtg < 1:7533890‑M1/15‑4 (MQ=255) gactgaagatttcgaaaactCTGCTGgctgggggg < 1:17187510‑M1/15‑4 (MQ=255) aatacgcacgtaacgccgtacgtatggctgggctg > 1:14382618‑M2/31‑33 (MQ=255) aaaaTCTGAACGTCCTGTTGGTGCTGGCTGGGCgg < 1:4994792/35‑1 (MQ=255) aaaaTCTGAACGTCCTGTTGCTGCTGGCTGGGCgg < 1:9025778/35‑1 (MQ=255) atacgcacgtaacgccgtacgtatggctgGGGggg > 1:15946502‑M2/30‑35 (MQ=255) actgaagatttcgaaaactCTGCTGGCTGGGGggg < 1:1232390‑M1/16‑1 (MQ=255) actgaagatttcgaaaactCTGCTGGCTGGGAggg < 1:2795779‑M1/16‑1 (MQ=255) aaaTCTGAACGTCCTGTTGCTGCTGGCTGGGGggg > 1:18414382/1‑35 (MQ=255) aaaTCTGAACGTCCTGTTGCTGCTGGCTGGGCgtg > 1:16396290/1‑33 (MQ=255) aaaTCTGAACGTCCTGTTGCTGCTGGCTGGGCggg < 1:17791496/35‑1 (MQ=255) aaaTCTGAACGTCCTGTTGCTGCTGGCTGGGCggg < 1:13509784/35‑1 (MQ=255) tacgcacgtaacgccgtacgtatggctgGGCGGgt > 1:5911866‑M2/29‑35 (MQ=255) ctgaagatttcgaaaactCTGCTGGCTGGGGGGgt < 1:13646117‑M1/17‑1 (MQ=255) ctgaagatttcgaaaactCTGCTGGCTGGGGGGgt < 1:7036776‑M1/17‑1 (MQ=255) aaTCTGAACGTCCTGTTGCTGCTGGCTGGGCGGgt < 1:11194403/35‑1 (MQ=255) aaTCTGAACGTCCTGTTGCTGCTGGCTGGGCGGgt < 1:9700918/35‑1 (MQ=255) aaTCTGAACGTCCTGTTGCTGCTGGCTGGGCGGgt < 1:18152108/35‑1 (MQ=255) aaTCTGAACGTCCTGTTGCTGATGGCTGGGCGGgt < 1:14562221/35‑1 (MQ=255) tgaagatttcgaaaactCTGCTGGCTGGGGGGgtg < 1:5795042‑M1/18‑1 (MQ=255) acgcacgtaacgccgtacgtatggctgGGCGGgtg > 1:375243‑M2/28‑35 (MQ=255) aTCTGAGCGTCCTGTTGCTGCTGGCTGGGCGGgtg < 1:829892/35‑1 (MQ=255) tCTGAACGTCCTGTTGCTGCTGGCTGGGCGGgtgt < 1:1531746/35‑1 (MQ=255) gaagatttcgaaaactCTGCTGGCTGGGGGGgtgt < 1:3101271‑M1/19‑1 (MQ=255) cTGAACGTCCTGTTGCTTCTGGCTGGGCGGGGGTc > 1:15220966/1‑35 (MQ=37) ttaaCGTCCTGTTGCTGCTGGCTGGGGGGGGGTCg > 1:4145517/3‑35 (MQ=25) tGAACGTCCTGTTGCTGCTGTCTGGGGGGGGGTCg > 1:20043974/1‑35 (MQ=25) tGAACGTCCTGTTGCTGATGGCTGGGCGGGTGTCg < 1:16587295/35‑1 (MQ=255) gAACGTCCTGTTGCTGCTGGCTGGGCGGGTGTCgg < 1:4875685/35‑1 (MQ=255) accGTGCTGTTGCTGCTGGCTGGGCGGGTGTCGGt < 1:16319207/33‑1 (MQ=37) aaCGTCCTTTTGCTGCTGGCTGGGCGGGGGTCggg > 1:359453/1‑34 (MQ=37) aaCGTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGt < 1:11956189/35‑1 (MQ=255) aaCCTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGt < 1:3160056/35‑1 (MQ=255) aCGTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGtt < 1:12609202/35‑1 (MQ=255) cGTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGttt < 1:11083596/35‑1 (MQ=255) cGTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGttt < 1:10481491/35‑1 (MQ=255) cGTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGttt < 1:5098648/35‑1 (MQ=255) cGTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGttt < 1:15275348/35‑1 (MQ=255) gTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGtttt < 1:9960136/35‑1 (MQ=255) gTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGtttt < 1:19034505/35‑1 (MQ=255) gTCCTGTTGCTGCTGGCTGGGCGGGGGGCGGtgtt > 1:2189729/1‑35 (MQ=25) gTCCTGTTGCTGATGGCTGGGCGGGTGTCGGtttt < 1:17404434/35‑1 (MQ=255) tCCTGTTGCTGCTGGCTGGGCGGGTGTCGGttttt < 1:12110906/35‑1 (MQ=255) tCCTGTTGCTGCTGGCTGGGCGGGTGTCGGttttt < 1:17337698/35‑1 (MQ=255) ccTGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTc < 1:6139480/35‑1 (MQ=255) ccTGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTc < 1:5410820/35‑1 (MQ=255) ccTGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTc < 1:8041283/35‑1 (MQ=255) ccTGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTc < 1:10055160/35‑1 (MQ=255) cTGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTCt < 1:17797626/35‑1 (MQ=255) tGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTCTa < 1:7720444/35‑1 (MQ=255) tGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTCTa < 1:19603922/35‑1 (MQ=255) tGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTCTa < 1:19609808/35‑1 (MQ=255) gTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTCTAt < 1:13125254/35‑1 (MQ=255) ttGCTGCTGGCTGGGCGGGTGTCGGTTTTTCTATc < 1:6892275/35‑1 (MQ=255) tgctgcTGGCTGGGCGGGTGTCGGTTTTTCTATCg < 1:2602193/35‑1 (MQ=255) tgctgcTGGCTGGGCGGGTGTCGGTTTTTCTATCg < 1:4348893/35‑1 (MQ=255) gctgctGGCTGGGCGGGTGTCGGTTTTTCTATCgg < 1:9492149/35‑1 (MQ=255) gctgctGGCTGGGCGGGTGTCGGTTTTTCTATCgg < 1:15549398/35‑1 (MQ=255) CTGCTGGCTGGGCGGGTGTCGGTTTTTCTATCGGt > 1:11435585‑M1/1‑35 (MQ=255) tgctgGCTGGGCGGGGGTCGGGTTTTTTTTCgggg > 1:14946683/1‑33 (MQ=16) TGCTGGCTGGGCGGGTGTCGGTTTTTCTATCGGTg > 1:13811252‑M1/1‑35 (MQ=255) TGCTGGCTGGGCGGGTGTCGGTTTTTCTATCGGTg > 1:4108502‑M1/1‑35 (MQ=255) GGCTGGGCGGGTGTCGGTTTTTCTATCGGTGCAAt > 1:3503572‑M1/1‑35 (MQ=255) GGCTGGGCGGGTGTCGGTTTTTCTATCGGTGCAAt > 1:17384636‑M1/1‑35 (MQ=255) GCTGGGCGGGTGTCGGTTTTTCTATCGGTGCAATg > 1:7314278‑M1/1‑35 (MQ=255) CTGGGCGGGTGTCGGTTTTTCTATCGGTGCAATGc > 1:19011788‑M1/1‑35 (MQ=255) CTGGGCGGGTGTCGGTTTTTCTATCGGTGCAATGc > 1:4704354‑M1/1‑35 (MQ=255) CTGGGCGGGTGTCGGTTTTTCTATAGGTGCAATGc > 1:2197316‑M1/1‑35 (MQ=255) TGGGCGGGTGTCGGTTTTTCTATCGGTGCAATGCt > 1:1012015‑M1/1‑35 (MQ=255) TGGGCGGGTGTCGGTTTTTCTATCGGGGCAATGCt < 1:12338103‑M1/35‑1 (MQ=255) ggCGGGTGTCGGTTTTTCTATCGGTGCAATGCTTg < 1:19335448/35‑1 (MQ=255) ggCGGGTGTCGGTTTTTCTATCGGTGCAATGCTTg < 1:641964/35‑1 (MQ=255) | TTCCAAAATCTGAACGTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTCTATCGGTGCAATGCTTG > REL606/3780447‑3780515 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |