Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,015,771 | IS150 (–) +3 bp | 97.6% | coding (1192‑1194/1677 nt) | ECB_02816 → | KpsD protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2775877 | NA (NA) | 109 (1.160) | 37/44 | NT | 97.9% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 3015771 = | 2 (0.020) | coding (1192/1677 nt) | ECB_02816 | KpsD protein | |||||
* | ? | REL606 | = 3015773 | 3 (0.040) | 97 (0.980) | 40/46 | NT | 96.6% | coding (1194/1677 nt) | ECB_02816 | KpsD protein |
? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 240 total aligned reads displayed.
TCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3015740‑3015773 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < REL606/3894996‑3894962 TCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT < 1:17584169/35‑1 TCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT < 1:14819409/35‑1 CTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTG < 1:7859614/35‑1 CTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTA < 1:11452539/35‑1 CTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTA > 1:7182085/1‑35 TCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTAC > 1:17982405/1‑35 CGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACT > 1:746239/1‑35 CGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACT < 1:19880541/35‑1 CGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACT < 1:1217911/35‑1 CGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACT < 1:12609396/35‑1 CGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACT < 1:6295033/35‑1 GCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTG < 1:13367379/35‑1 GCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTG < 1:7309179/35‑1 CTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGA > 1:3766490/1‑35 CTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGA > 1:2319719/1‑35 CTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGA < 1:5084099/35‑1 TGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGAC > 1:4267204/1‑35 TGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGAC < 1:7783829/35‑1 TGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGAC > 1:988159/1‑35 GCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACC < 1:15532594/35‑1 GCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACC > 1:13660076/1‑35 GCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACC < 1:8238551/35‑1 GCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACC < 1:1288707/35‑1 GCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACC > 1:10590562/1‑35 CAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCC > 1:5352437/1‑35 CAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCC > 1:11189305/1‑35 AAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCC > 1:173251/1‑35 AAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCC > 1:16760828/1‑35 AAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCC < 1:12251268/35‑1 AAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCA < 1:2830990/35‑1 AAAGCGGGAGGAAGCCTCACTTTGTACTGACCCCA < 1:20401881/35‑1 AAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAA < 1:19489234/35‑1 CTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAA < 1:11714297/35‑1 TGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAG > 1:19697953/1‑35 TGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAG < 1:18987986/35‑1 TGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAG > 1:17425565/1‑35 TGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAG > 1:4764813/1‑35 GGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGT < 1:19141765/35‑1 GGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGT < 1:17758202/35‑1 GGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGG > 1:1241218/1‑35 GAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGA > 1:9131358/1‑35 AAGCCTCACTTTGTACTGACCCCAAAAAGTTGGAC < 1:4187900/35‑1 AAGCCTCACTTTGTACTGACCCCAAAAAGTTGGAC < 1:5875154/35‑1 AGCCTCACTTTGTACTGACCCCAAAAAGTTGGACA < 1:9754955/35‑1 AGCCTCACTTTGTACTGACCCCAAAAAGTTGGACA < 1:20211753/35‑1 AGCCTCACTTTGTACTGACCCCAAAAAGTTGGACA > 1:18762546/1‑35 GCCTCACTTTGTACTGACCCCAAAAAGTTGGACAG < 1:4553787/35‑1 GCCTCACTTTGTACTGACCCCAAAAAGTTGGACAG < 1:8487066/35‑1 GCCTCACTTTGTACTGACCCCAAAAAGTTGGACAG < 1:9650921/35‑1 CCTCACTTTGTACTGACCCCAAAAAGTTGGACAGT > 1:17872805/1‑35 CTCACTTTGTACTGACCCCAAAAAGTTGGACAGTT > 1:10614188/1‑35 TCACTTTGTACTGACCCCAAAAAGTTGGACAGTTA > 1:7973112/1‑35 TCACTTTGTACTGACCCCAAAAAGTTGGACAGTTA < 1:13239774/35‑1 CACTTTGTACTTACCCCAAAAAGTTGGACAGTTAA > 1:13848976/1‑35 CACTTTGTACTGACCCCAAAAAGTTGGACAGTTAA < 1:15173702/35‑1 CACTTTGTACTGACCCCAAAAAGTTGGACAGTTAA < 1:7616887/35‑1 ggaTTGTACTGACCCCAAAAAGTTGGACAGTTAAA > 1:5935309/4‑35 aaTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC > 1:16396308/3‑35 aaTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:14120628/33‑1 aaTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:7369908/33‑1 CTTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC > 1:18550631/1‑35 CTTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:5562958/35‑1 aTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:14029175/34‑1 aTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:304883/2‑35 aTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:14979757/2‑35 TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:2783512/35‑1 TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:11638460/35‑1 TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:3406202/1‑35 TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:8301461/35‑1 TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:19370689/35‑1 TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:18416956/1‑35 TTGTACTGACCCCAAAAAGTTGGACAGTTAAACAC < 1:1886644/35‑1 TGTACTGACCCCAAAAAGTTTGACAGTTAAACACG > 1:13037694/1‑35 TGTACTGACCCCAAAAAGTTTGACAGTTAAACACG > 1:20010430/1‑35 TGTACTGACCCCAAAAAGTTGTACAGTTAAACACG > 1:3705270/1‑35 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG > 1:6946542/1‑35 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:11432296/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:10372060/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:10272257/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:9321897/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:9424945/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG > 1:10034299/1‑35 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:17129724/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:16988849/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG > 1:16890099/1‑35 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:17810934/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG > 1:16546323/1‑35 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG > 1:16052934/1‑35 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG > 1:19584914/1‑35 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:15328663/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG > 1:19797024/1‑35 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG > 1:2190594/1‑35 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:14622546/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG > 1:2686700/1‑35 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:14381927/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:6197226/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:12762728/35‑1 TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:6588653/35‑1 TGTACTGACCCAAAAAAGTTGGACAGTTAAACACG < 1:19207965/35‑1 TGTACTGACCCAAAAAAGTTGGACAGTTAAACACG < 1:16571444/35‑1 TCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3015740‑3015773 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < REL606/3894996‑3894962 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |