Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 2,448,493 | IS186 (+) +6 bp | 66.5% | intergenic (+24/+21) | nupC → / ← yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2448493 = | 30 (0.470) | 59 (0.660) | 32/42 | NT | 58.4% | intergenic (+24/+26) | nupC/yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
? | REL606 | = 2774196 | NA (NA) | noncoding (1343/1343 nt) | IS186 | repeat region | |||||
* | ? | REL606 | = 2448498 | 32 (0.500) | 64 (0.710) | 34/42 | NT | 58.8% | intergenic (+29/+21) | nupC/yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
? | REL606 | 2772854 = | NA (NA) | noncoding (1/1343 nt) | IS186 | repeat region |
Only 100 of 263 total aligned reads displayed.
TGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGC > REL606/2448459‑2448527 | tGGTGCTGTAAGACCATACATAAAAAAGCCGGGGa < 1:10410702/35‑1 (MQ=255) ggTGCTGTAAGACCATACATAAAAAAGCCGGGGAt < 1:10696737/35‑1 (MQ=255) ggTGCTGTAAGACCATACATAAAAAAGCCGGGGAt > 1:11940317/1‑35 (MQ=255) gTGCTGTAAGACCATACATAAAAAAGCCGGGGATa < 1:10892486/35‑1 (MQ=255) gTGCTGTAAGACCATACATAAAAAAGCCGGGGATa > 1:11544137/1‑35 (MQ=255) gCTGTAAGACCATACATAAAAAAGCCGGGGATAAt > 1:15010088/1‑35 (MQ=255) gCTGTAAGACCATACATAAAAAAGCCGGGGATAAt < 1:18507891/35‑1 (MQ=255) gCTGTAAGACCATACATAAAAAAGCCGGGGATAAt < 1:5619186/35‑1 (MQ=255) ggttcaacccttaagttagcgcttatgggATAAtt < 1:1350345‑M1/6‑1 (MQ=255) cTGTAAGACCATACATAAAAAAGCCGGGGATAAtt > 1:11125271/1‑35 (MQ=255) cTGTAAGACCATACATAAAAAAGCCGGGGATAAtt < 1:3938081/35‑1 (MQ=255) cTGTAAGACCATACATAAAAAAGCCGGGGATAAtt > 1:20429344/1‑35 (MQ=255) cTGTAAGACCATACATAAAAAAGCCGGGGATAAtt > 1:13465229/1‑35 (MQ=255) cTGTAAGACCATACATAAAAAAGCCGGGGATAAtt > 1:8948967/1‑35 (MQ=255) tGTAAGACCATACATAAAAAAGCCGGGGATAATTc < 1:16798709‑M1/35‑2 (MQ=255) ttcaacccttaagttagcgcttatgggATCATTcc < 1:9789853‑M1/8‑1 (MQ=255) gTAAGACCATACATAAAAAAGCCGGGGATAATTcc < 1:19728252‑M1/35‑3 (MQ=255) gTAAGACCATACATAAAAAAGCCGGGGATAATTcc < 1:2888579‑M1/35‑3 (MQ=255) tAAGACCATACATAAAAAAGCCGGGGATAATTccc > 1:4913032‑M1/1‑32 (MQ=255) tAAGACCATACATAAAAAAGCCGGGGATAATTccc < 1:2576006‑M1/35‑4 (MQ=255) caacccttaagttagcgcttatgggATAATTcccc > 1:19825005‑M1/26‑35 (MQ=255) aaGACCATACATAAAAAAGCCGGGGATAATTcccc < 1:17004888/35‑1 (MQ=255) aaGACCATACATAAAAAAGCCGGGGATAATTcccc > 1:184997/1‑35 (MQ=255) aaGACCATACATAAAAAAGCCGGGGATAATTccca > 1:11534607‑M1/1‑31 (MQ=255) aacccttaagttagcgcttatgggATAATTCCCCg > 1:18362053‑M1/25‑35 (MQ=255) aGACCATACATAAAAAAGCCGGGGATAATTcccat > 1:11600311‑M1/1‑30 (MQ=255) aGACCATACATAAAAAAGCCGGGGATAATTCCCCg < 1:14381800/35‑1 (MQ=255) aGACCATACATAAAAAAGCCGGGGATAATTCCCCg > 1:19880050/1‑35 (MQ=255) gACCATACATAAAAAAGCCGGGGATAATTcccata > 1:6211445‑M1/1‑29 (MQ=255) gACCATACATAAAAAAGCCGGGGATAATTCCCCgg < 1:2304398/35‑1 (MQ=255) gACCATACATAAAAAAGCCGGGGATAATTCCCCgg > 1:19427471/1‑35 (MQ=255) aCCATACATAAAAAAGCCGGGGATAATTcccataa < 1:20490648‑M1/35‑8 (MQ=255) aCCATACATAAAAAAGCCGGGGATAATTCCCCGGt < 1:14938077/35‑1 (MQ=255) catacataAAAAAGCCGGGGATAATTcccataagc < 1:18999955‑M1/35‑10 (MQ=255) catacataAAAAAGCCGGGGATAATTCCCCGGttt > 1:12429540/1‑35 (MQ=255) atacataAAAAAGCCGGGGATAATTcccataagcg < 1:15303238‑M1/35‑11 (MQ=255) taagttagcgcttatgggATAATTCCCCGGttttt > 1:17223589‑M1/19‑35 (MQ=255) taagttagcgcttatgggATAATTCCCCGGttttt < 1:15814655‑M1/17‑1 (MQ=255) acataAAAAAGCCGGGGATAATTcccataagcgct > 1:11804998‑M1/1‑23 (MQ=255) acataAAAAAGCCGGGGATAATTCCCCGGtttttt < 1:4535044/35‑1 (MQ=255) acataAAAAAGCCGGGGATAATTCCCCGGtttttt < 1:745932/35‑1 (MQ=255) cataAAAAAGCCGGGGATGATTcccataagcgcta < 1:19409856‑M1/35‑14 (MQ=255) cataAAAAAGCCGGGGATGATTcccataagcgcta > 1:139947‑M1/1‑22 (MQ=255) cataAAAAAGCCGGGGATAATTcccataagcgcta < 1:13256105‑M1/35‑14 (MQ=255) cataAAAAAGCCGGGGATAATTcccataagcgcta > 1:807083‑M1/1‑22 (MQ=255) cataAAAAAGCCGGGGATAATTCCCCGGttttttt < 1:5153122/35‑1 (MQ=255) agttagcgcttatgggATAATTCCCCGGttttttt > 1:7578461‑M1/17‑35 (MQ=255) gttagcgcttatgggATAATTCCCCGGTTTTTTTa < 1:8657160‑M1/20‑1 (MQ=255) gttagcgcttatgggATAATTCCCCGGTTTTTTTa < 1:17790497‑M1/20‑1 (MQ=255) ataAAAAAGCCGGGGATAATTcccataagcgctaa < 1:15190322‑M1/35‑15 (MQ=255) ataAAAAAGCCGGGGATAATTcccataagcgctaa > 1:20036515‑M1/1‑21 (MQ=255) ttagcgcttatgggATAATTCCCCGGTTTTTTTAc > 1:2867691‑M1/15‑35 (MQ=255) ttagcgcttatgggATAATTCCCCGGTTTTTTTAc < 1:3772738‑M1/21‑1 (MQ=255) ttagcgcttatgggATAATTCCCCGGTTTTTTTAc < 1:17432747‑M1/21‑1 (MQ=255) taAAAAAGCCGGGGATAATTcccataagcgctaac < 1:20157422‑M1/35‑16 (MQ=255) taAAAAAGCCGGGGATAATTCCCCGGTTTTTTTAc < 1:2664667/35‑1 (MQ=255) taAAAAAGCCGGGGATAATGCCCCGGTTTTTTTAc < 1:6284854/35‑1 (MQ=255) tagcgcttatgggATAATTCCCCGGTTTTTTTACg > 1:17660642‑M1/14‑35 (MQ=255) aaaaaaGCCGGGGATAATTCCCCGGTTTTTTTACg < 1:13141680/35‑1 (MQ=255) aaaaaaGCCGGGGATAATTCCCCGGTTTTTTTACg > 1:6068266/1‑35 (MQ=255) agcgcttatgggATAATTCCCCGGTTTTTTTACGc < 1:15743302‑M1/23‑1 (MQ=255) aaaaaGCCGGGGATAATTcccataagcgctaactt > 1:9332881‑M1/1‑18 (MQ=255) aaaaaGCCGGGGATAATTcccataagcgctaactt > 1:2105052‑M1/1‑18 (MQ=255) aaaaaGCCGGGGATAATTcccataagcgctaactt > 1:15700963‑M1/1‑18 (MQ=255) aaaaaGCCGGGGATAATTcccataagcgctaactt < 1:6507339‑M1/35‑18 (MQ=255) cgcttatgggATAATTCCCCGGTTTTTTTACGCCt < 1:2510540‑M1/25‑1 (MQ=255) cgcttatgggATAATTCCCCGGTTTTTTTACGCCt < 1:14618220‑M1/25‑1 (MQ=255) gcttatgggATAATTCCCCGGTTTTTTTACGCCTg > 1:7776935‑M1/10‑35 (MQ=255) gcttatgggATAATTCCCCGGTTTTTTTACGCCTg > 1:3428254‑M1/10‑35 (MQ=255) aaGCCGGGGATAATTcccataagcgctaacttaag > 1:18895499‑M1/1‑15 (MQ=255) aaGCCGGGGATAATTcccataagcgctaacttaag < 1:367403‑M1/35‑21 (MQ=255) aaGCCGGGGATAATTCCCCGGTTTTTTTACGCCTg > 1:16333615/1‑35 (MQ=255) cttatgggATAATTCCCCGGTTTTTTTACGCCTGt > 1:9395986‑M1/9‑35 (MQ=255) cttatgggATAATTCCCCGGTTTTTTTACGCCTGt > 1:7351671‑M1/9‑35 (MQ=255) ttatgggATAATTCCCCGGTTTTTTTACGCCTGtt < 1:13571975‑M1/28‑1 (MQ=255) gCCGGGGATAATTCCCCGGTTTTTTTACGCCTGtt > 1:16367244/1‑35 (MQ=255) cGGTGATAATTcccataagcgctaacttaagggtt > 1:8531378‑M1/1‑11 (MQ=255) atgggATAATTCCCCGGTTTTTTTACGCCTGTTaa > 1:640511‑M1/6‑35 (MQ=255) tgggATAATTCCCCGGTTTTTTTACGCCTGTTAAt < 1:19267890‑M1/31‑1 (MQ=255) tgggATAATTCCCCGGTTTTTTTACGCCTGTTAAt < 1:14295695‑M1/31‑1 (MQ=255) ggggATAATTcccataagcgctaacttaagggttg < 1:7014372‑M1/35‑26 (MQ=255) ggATAATTcccataagcgctaacttaagggttgtg < 1:12675952‑M1/35‑28 (MQ=255) ggATAATTcccataagcgctaacttaagggttgtg > 1:1908678‑M1/1‑8 (MQ=255) ggATAATTCCCCGGTTTTTTTACGCCTGTTAATCa < 1:4144605‑M1/33‑1 (MQ=255) ggATAATTCCCCGGTTTTTTTACGCCTGTTAATCa > 1:9170554‑M1/3‑35 (MQ=255) gATAATTcccataagcgctaacttaagggttgtgg < 1:12344453‑M1/35‑29 (MQ=255) gATAATTcccataagcgctaacttaagggttgtgg < 1:7316999‑M1/35‑29 (MQ=255) gATAATTcccataagcgctaacttaagggttgtgg < 1:16547122‑M1/35‑29 (MQ=255) gATAATTcccataagcgctaacttaaggattgtgg > 1:15461687‑M1/1‑7 (MQ=255) gATAATTCCCCGGTTTTTTTACGCCTGTTAATCAg < 1:10145800‑M1/34‑1 (MQ=255) gATAATTCCCCGGTTTTTTTACGCCTGTTAATCAg < 1:8166078‑M1/34‑1 (MQ=255) gATAATTCCCCGGTTTTTTTACGCCTGTTAATCAg > 1:17938064‑M1/2‑35 (MQ=255) gATAATTCCCCGGTTTTTTTACGCCTGTTAATCAg < 1:19512042‑M1/34‑1 (MQ=255) gATAATTCCCCGGTTTTTTTACGCCTGTTAATCAg > 1:5520301‑M1/2‑35 (MQ=255) aTAATTcccataagcgctaacttaagggttgtggt < 1:17315807‑M1/35‑30 (MQ=255) aTAATTcccataagcgctaacttaagggttgtggt < 1:2812843‑M1/35‑30 (MQ=255) aTAATTCCCCGGTTTTTTTACGCCTGTTAATCAGc > 1:18257137/1‑35 (MQ=255) aTAATTCCCCGGTTTTTTTACGCCTGTTAATCAGc > 1:13777010/1‑35 (MQ=255) aTAATTCCCCGGTTTTTTTACGCCTGTTAATCAGc > 1:13360551/1‑35 (MQ=255) aTAATTCCCCGGTTTTTTTACGCCTGTTAATCAGc > 1:4695640/1‑35 (MQ=255) | TGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGC > REL606/2448459‑2448527 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |