New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 4154898 | 72 (0.700) | 7 (0.080) | 5/42 | NT | 8.7% | intergenic (‑261/‑101) | coaA/thrU | pantothenate kinase/tRNA‑Thr |
? | REL606 | 4351442 = | 84 (0.930) | intergenic (+50/‑88) | groEL/yjeI | chaperonin GroEL/hypothetical protein |
Only 100 of 137 total aligned reads displayed.
TGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATA > REL606/4154864‑4154932 | tGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTG > 1:15197735‑M1/1‑35 (MQ=255) tGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTG < 1:12141354‑M1/35‑1 (MQ=255) tGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTG < 1:15861427‑M1/35‑1 (MQ=255) gAAAAAGTGTTCTAATCTGCCCTCCGTTCGGCTGg > 1:10742968‑M1/1‑34 (MQ=255) gAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGt < 1:13975326/35‑1 (MQ=255) gAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGt < 1:5474895/35‑1 (MQ=255) gAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGg > 1:7929560‑M1/1‑34 (MQ=255) gAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGg > 1:953809‑M1/1‑34 (MQ=255) aaaaaGTGTGCTAATCTGCCCTCCGTTCGGCTGgg > 1:2394914‑M1/1‑33 (MQ=255) aaaaaGTGTGCTAATCTGCCCTCCGTTCGGCTGgg > 1:15625991‑M1/1‑33 (MQ=255) aaaaaGTGTGCTAATCTGCCCTCCGTTCGGCTGgg > 1:15244574‑M1/1‑33 (MQ=255) aaaaGTGTGCTAATCTGCCCTCCGTTCGGCTGttt < 1:8481959/35‑1 (MQ=255) aaaaGTGTGCTAATCTGCCCTCCGTTCGGCTGttt < 1:10236712/35‑1 (MQ=255) aaaaGTGTGCTAATCTGCCCTCCGTTCGGCTGggt > 1:3881867‑M1/1‑32 (MQ=255) aaaaGTGTGCTAATCTGCCCTCCGTTCGGCTGggt > 1:6972542‑M1/1‑32 (MQ=255) aaaaGTGTGCTAATCTGCCCTCCGTTCGGCTGggg > 1:314237‑M1/1‑32 (MQ=255) aaaaGTGTGCTAATCTGCCCTCCGTTCGGCTGggg > 1:1183860‑M1/1‑32 (MQ=255) aaaaGTGTGCTAATCTGCCCTCCGTTCGGCTGggg > 1:18848101‑M1/1‑32 (MQ=255) aaaGTGTGCTAATCTGCCCTCCGTTCGGCTGggtg > 1:1925384‑M1/1‑31 (MQ=255) aaaGTGTGCTAATCTGCCCTCCGTTCGGCTGgggg > 1:6602774‑M1/1‑31 (MQ=255) aaaGTGTGCTAATCTGCCCTCCGTTCGGCTGTttc < 1:13729326/35‑1 (MQ=255) aaGTGTGCTAATCTGCCCTCCGTTCGGCTGggtgt > 1:15280077‑M1/1‑30 (MQ=255) aaGTGTGCTAATCTGCCCTCCGTTCGGCTGgggtt > 1:5410414‑M1/1‑30 (MQ=255) aaGTGTGCTAATCTGCCCTCCGTTCGGCTGggggt > 1:19241495‑M1/1‑30 (MQ=255) aaGTGTGCTAATCTGCCCTCCGTTCGGCTGTttct < 1:19358589/35‑1 (MQ=255) aaGTGTGCTAATCTGCCCTCCGTTCGGCTGTttct < 1:2145132/35‑1 (MQ=255) aaGTGTGCTAATCTGCCCTCCGTTCGGCTGTttct < 1:4414328/35‑1 (MQ=255) aGTGTGCTAATCTGCCCTCCGTTCGGCTGgggttt > 1:10071096‑M1/1‑29 (MQ=255) aGTGTGCTAATCTGCCCTCCGTTCGGCTGTttctt < 1:762541/35‑1 (MQ=255) aGTGTGCTAATCTGCCCTCCGTTCGGCTGTttctt < 1:14674988/35‑1 (MQ=255) gtgtGCTAATCTGCCCTCCGTTCGGCTGggtgttt > 1:4646702‑M1/1‑28 (MQ=255) gtgtGCTAATCTGCCCTCCGTTCGGCTGTttcttc < 1:14007051/35‑1 (MQ=255) tgtgCTAATCTGCCCTCCGTTCGGCTGggtgtttt > 1:10508596‑M1/1‑27 (MQ=255) tgtgCTAATCTGCCCTCCGTTCGGCTGggggtttt > 1:6766460‑M1/1‑27 (MQ=255) tgtgCTAATCTGCCCTCCGTTCGGCTGTTTCTTCa < 1:18176119/35‑1 (MQ=255) gtgCTAATCTGCCCTCCGTTCGGCTGTTTCTTCAt < 1:8401186/35‑1 (MQ=255) gtgCTAATCTGCCCTCCGTTCGGCTGTTTCTTCAt < 1:18652499/35‑1 (MQ=255) tgCTAATCTGCCCTCCGTTCGGCTGggtgtttttc > 1:5779491‑M1/1‑25 (MQ=255) tgCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATc < 1:12162921/35‑1 (MQ=255) tgCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATc < 1:12429190/35‑1 (MQ=255) tgCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATc < 1:20545619/35‑1 (MQ=255) tgCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATc < 1:17802867/35‑1 (MQ=255) tgCTAATCTGCACTCCGTTCGGCTGTTTCTTCATc < 1:9402898/35‑1 (MQ=255) gCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCg < 1:12564874/35‑1 (MQ=255) gCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCg < 1:7511362/35‑1 (MQ=255) cTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCgt < 1:10466548/35‑1 (MQ=255) cTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCgt < 1:13262191/35‑1 (MQ=255) tAATCTGCCCTCCGTTCGGCTGTTTCTTCATCgtg < 1:19597814/35‑1 (MQ=255) tAATCTGCCCTCCGTTCGGCTGTTTCTTCATCgtg < 1:5918150/35‑1 (MQ=255) aaTCTGCCCTCCGTTCGGCTGggtgtttttctttt > 1:2005270‑M1/1‑21 (MQ=255) aaTCTGCCCTCCGTTCGGCTGTTTCTTCATCgtgt < 1:2396836/35‑1 (MQ=255) aaTCTGCCCTCCGTTCGGCTGTTTCTTCATCgtgt < 1:10034128/35‑1 (MQ=255) aTCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTc < 1:7485177/35‑1 (MQ=255) cTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGc < 1:9456642/35‑1 (MQ=255) cTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGc < 1:16041776/35‑1 (MQ=255) cTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGc < 1:1699212/35‑1 (MQ=255) tGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCa < 1:17511155/35‑1 (MQ=255) tGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCa < 1:16727498/35‑1 (MQ=255) gCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCAt < 1:20485548/35‑1 (MQ=255) cccTCCGTTCGGCTGTTTCTTCATCGTGTCGCATa < 1:8752302/35‑1 (MQ=255) cccTCCGTTCGGCTGTTTCTTCATCGTGTCGCATa < 1:20283952/35‑1 (MQ=255) cccTCCGTTCGGCTGTTTCTTCATCGTGTCGCATa < 1:10137086/35‑1 (MQ=255) ccTCCGTTCGGCTGTTTCTTCATCGTGTCGCATaa < 1:5302761/35‑1 (MQ=255) ccTCCGTTCGGCTGTTTCTTCATCGTGTCGCATaa < 1:20426788/35‑1 (MQ=255) ccTCCGTTCGGCTGTTTCTTCATCGTGTCGCATaa < 1:6591660/35‑1 (MQ=255) cTCCGTTCGGCTGTTTCTTCATCGTGTCGCATaaa < 1:16756537/35‑1 (MQ=255) cTCCGTTCGGCTGTTTCTTCATCGTGTCGCATaaa < 1:11445679/35‑1 (MQ=255) tCCGTTCGGCTGTTTCTTCATCGTGTCGCATaaaa < 1:13638936/35‑1 (MQ=255) tCCGTTCGGCTGTTTCTTCATCGTGTCGCATaaaa < 1:6896619/35‑1 (MQ=255) ccGTTCGGCTGTTTCTTCATCGTGTCGCATAAAAt < 1:7280410/35‑1 (MQ=255) ccGTTCGGCTGTTTCTTCATCGTGTCGCATAAAAt < 1:11055681/35‑1 (MQ=255) ccGTTCGGCTGTTTCTTCATCGTGTCGCATAAAAt < 1:18545286/35‑1 (MQ=255) cGTTCGTCTGTTTCTTCATCGTGTCGCATAAAAtg < 1:12293142/35‑1 (MQ=255) cGTTCGGCTGTTTCTTCATCGTGTCGCATAAAAtg < 1:14455731/35‑1 (MQ=255) cGTTCGGCTGTTTCTTCATCGTGTCGCATAAAAtg < 1:5904040/35‑1 (MQ=255) cGTTCGGCTGTTTCTTCATCGTGTCGCATAAAAtg < 1:2656713/35‑1 (MQ=255) gTTCGGCTGTTTCTTCATCGTGTCGCATAAAAtgt < 1:1356473/35‑1 (MQ=255) gTTCGGCTGTTTCTTCATCGTGTCGCATAAAAtgt < 1:19885083/35‑1 (MQ=255) gTTCAGCTGTTTCTTCATCGTGTCGCATAAAAtgt > 1:13927965/1‑35 (MQ=255) ttCGGCTGTTTCTTCATCGTGTCGCATAAAAtgtg < 1:14032030/35‑1 (MQ=255) ttCGGCTGTTTCTTCATCGTGTCGCATAAAAtgtg < 1:6663507/35‑1 (MQ=255) tCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGa < 1:18486819/35‑1 (MQ=255) cGGCTGTTTCTTCATCGTGTCGCATAAAGTGTGAc < 1:3121465/35‑1 (MQ=255) cGGCTGTTTCTTCATCGTGTCGCATAAAATGTGAc < 1:11895344/35‑1 (MQ=255) gCTGTTTCTTCATCGTGTCGCATAAAATGTGACCa < 1:9627204/35‑1 (MQ=255) gCTGTTTCTTCATCGTGTCGCATAAAATGTGACCa > 1:8001329/1‑35 (MQ=255) gCTGTTTCTTCATCGTGTCGCATAAAATGTGACCa > 1:11313119/1‑35 (MQ=255) gCTGTTTCTTCATCGTGTCGCATAAAATGTGACCa > 1:15591657/1‑35 (MQ=255) gCTGTTTCTTCATCGTGTCGCATAAAATGTGACCa < 1:1981784/35‑1 (MQ=255) cTGTTTCTTCATCGTGTCGCATAAAATGTGACCaa > 1:9594736/1‑35 (MQ=255) tGTTTCTTCATCGTGTCGCATAAAATGTGACCAAt > 1:15505502/1‑35 (MQ=255) tGTTTCTTCATCGTGTCGCATAAAATGTGACCAAt > 1:4168149/1‑35 (MQ=255) tGTTTCTTCATCGTGTCGCATAAAATGTGACCAAt > 1:4040961/1‑35 (MQ=255) tGTTTCTTCATCGTGTCGCATAAAATGTGACCAAt > 1:2897502/1‑35 (MQ=255) tGTTTCTTCATCGTGTCGCATAAAATGTGACCAAt < 1:20044701/35‑1 (MQ=255) tGTTTCTTCATCGTGTCGCATAAAATGTGACCAAt > 1:18814498/1‑35 (MQ=255) gTTTCTTCATCGTGTCGCATAAAATGTGACCAATa < 1:6775343/35‑1 (MQ=255) gTTTCTTCATCGTGTCGCATAAAATGTGACCAATa < 1:11668526/35‑1 (MQ=255) gTTTCTTCATCGTGTCGCATAAAATGTGACCAATa > 1:11575021/1‑35 (MQ=255) gTTTCTTCATCGTGTCGCATAAAATGTGACCAATa < 1:14115472/35‑1 (MQ=255) | TGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATA > REL606/4154864‑4154932 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |