New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3069621 | 69 (0.670) | 12 (0.140) | 4/40 | NT | 17.1% | coding (838/1500 nt) | pitB | phosphate transporter |
? | REL606 | = 3625456 | 59 (0.690) | pseudogene (7/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
Only 100 of 124 total aligned reads displayed.
AATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTG > REL606/3069587‑3069655 | aaTGGAGGTTCCATCGCAATCAACTTCTGCGGCAG < 1:6549745‑M1/35‑1 (MQ=255) aTGGAGGTTCCATCGCATTCAACTTCTGCGGCAGt < 1:10197333/35‑1 (MQ=255) aTGGAGGTTCCATCGCAATCAACTTCTGCGGCAGt < 1:14233901/35‑1 (MQ=255) aTGGAGGTTCCATCGCAATCAACTTCTGCGGCAGt < 1:16535989/35‑1 (MQ=255) aTGGAGGTTCCATCGCAATCAACTTCTGCGGCAGt < 1:6764043/35‑1 (MQ=255) aTGGAGGGTCCATCGCAATCAACTTCTGCGGGAgg > 1:8525170/1‑34 (MQ=25) aTGGAGGGTCCATCGCAATCAACTTCTGCGGCAGg > 1:14411894‑M1/1‑34 (MQ=255) aTGGAGGGTCCATCGCAATCAACTTCTGCGGCAGg > 1:14130098‑M1/1‑34 (MQ=255) aTGGAGGGTCCATCGCAATCAACTTCTGCGGCAGg > 1:10781162‑M1/1‑34 (MQ=255) tGGAGGTTCCATCGCAATCAACTTCTGCGGCAGtt < 1:15800728/35‑1 (MQ=255) tGGAGGTTCCATCGCAATCAACTTCTGCGGCAGgg > 1:16496884‑M1/1‑33 (MQ=255) ggAGGTTCCATCGCAATCAACTTCTGCGGCAGggg > 1:12878756‑M1/1‑32 (MQ=255) ggAGGTTCCATCGCAATCAACTTCTGCGGCAGggg > 1:955876‑M1/1‑32 (MQ=255) ggAGGTTCCATCGCAATCAACTTCTGCGGCAGggg > 1:10983670‑M1/1‑32 (MQ=255) ggAGGTTCCATCGCAATCAACTTCTGCGGCAGTTc < 1:11414244/35‑1 (MQ=255) gAGGTTCCATCGCAATCAACTTCTGCGGCAGgggg > 1:16779454‑M1/1‑31 (MQ=255) gAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCa < 1:18837563/35‑1 (MQ=255) gAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCa < 1:9557721/35‑1 (MQ=255) gAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCa < 1:1033227/35‑1 (MQ=255) aGGTTCCATCGCAATCAACTTCTGCGGCAGggggg > 1:16595993‑M1/1‑30 (MQ=255) aGGTTCCATCGCAATCAACTTCTGCGGCAGggggg > 1:15604591‑M1/1‑30 (MQ=255) aGGTTCCATCGCAATCAACTTCTGCGGCAGggcgg > 1:3020323‑M1/1‑30 (MQ=255) aGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAg < 1:5542029/35‑1 (MQ=255) aGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAg < 1:15942491/35‑1 (MQ=255) ggTTCCATCGCAATCAACTTCTGCGGCAGgggggg > 1:4958347‑M1/1‑29 (MQ=255) ggTTCCATCGCAATCAACTTCTGCGGCAGTTCAgg < 1:11142200/35‑1 (MQ=255) ggTTCCATCGCAATCAACTTCTGCGGCAGTTCAgg < 1:17056030/35‑1 (MQ=255) gTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGa < 1:17055873/35‑1 (MQ=255) gTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGa < 1:18693035/35‑1 (MQ=255) ttCCATCGCAATCAACTTCTGCGGCAGgggggggg > 1:5351892‑M1/1‑27 (MQ=255) ttCCATCGCAATCAACTTCTGCGGCAGgggggggg > 1:16029725‑M1/1‑27 (MQ=255) ttCCATCGCAATCAACTTCTGCGGCAGgggggggg > 1:13405240‑M1/1‑27 (MQ=255) ttCCATCGCAATCAACTTCTGCGGCAGTTCAGGAt < 1:4807258/35‑1 (MQ=255) ttCCATCGCAATCAACTTCTGCGGCAGTTCAGGAt < 1:16067231/35‑1 (MQ=255) ttCCATCGCAATCAACTTCTGCGGCAGTTCAGGAt < 1:4288479/35‑1 (MQ=255) tCCATCGCAATCAACTTCTGCGGCAGggggggggg > 1:7292365‑M1/1‑26 (MQ=255) tCCATCGCAATCAACTTCTGCGGCAGTTCAGGATg < 1:2472010/35‑1 (MQ=255) ccATCGCAATCAACTTCTGCGGCAGgggggggggg > 1:2631909‑M1/1‑25 (MQ=255) ccATCGCAATCAACTTCTGCGGCAGTTCAGGATgg < 1:9471166/35‑2 (MQ=255) ccATCGCAATCAACTTCTGCGGCAGTTCAGGATGc < 1:11680948/35‑1 (MQ=255) ccATCGCAATCAACTTCTGCGGCAGTTCAGGATGc < 1:9261662/35‑1 (MQ=255) ccATCGCAATCAACTTCTGCGGCAGTTCAGGATGc < 1:1785042/35‑1 (MQ=255) cATCGCAATCAACTTCTGCGGCAGggggggggggg > 1:6320725‑M1/1‑24 (MQ=255) cATCGCAATCAACTTCTGCGGCAGggggggggggg > 1:16499908‑M1/1‑24 (MQ=255) cATCGCAATCAACTTCTGCGGCAGTTCAGGATGCt < 1:1992756/35‑1 (MQ=255) cATCGCAATCAACTTCTGCGGCAGTTCAGGATGCt < 1:10627211/35‑1 (MQ=255) cATCGCAATCAACTTCTGCGGCAGTTCAGGATGCt < 1:16215704/35‑1 (MQ=255) aTCGCAATCAACTTCTGCGGCAGgggggggggggt > 1:8525978‑M1/1‑23 (MQ=255) aTCGCAATCAACTTCTGCGGCAGgggggggggggg > 1:13660785‑M1/1‑23 (MQ=255) tCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGt < 1:3076616/35‑1 (MQ=255) tCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGt < 1:17122311/35‑1 (MQ=255) tCGCAATCAACTTCTGCGGCAGGTCAGGGTGGTGt > 1:10186235/1‑35 (MQ=18) cGCAATCAACTTCTGCGGCAGTTCAGGATGCTGtt < 1:17183180/35‑1 (MQ=255) cGCAATCAACTTCTGCGGCAGTTCAGGATGCTGtt < 1:10686748/35‑1 (MQ=255) gCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTg < 1:3936730/35‑1 (MQ=255) cAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGc < 1:12340050/35‑1 (MQ=255) cAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGc < 1:6952070/35‑1 (MQ=255) cAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGc < 1:7133908/35‑1 (MQ=255) aaTCAACTTCTGCTGCAGTTCAGGATGCTGTTGCa > 1:1819789/1‑35 (MQ=255) aaTCAACTTCTGCGGCAGTTCAGGATGCTGTTGCa < 1:16065438/35‑1 (MQ=255) aaTCAACTTATGCGGCAGTTCAGGATGCTGTTGCa < 1:12315221/35‑1 (MQ=255) aTCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAg < 1:10377629/35‑1 (MQ=255) aTCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAg < 1:19431909/35‑1 (MQ=255) cAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGt < 1:11520341/35‑1 (MQ=255) cAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGt < 1:11414718/35‑1 (MQ=255) aaCTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTa < 1:20291628/35‑1 (MQ=255) aCTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAg < 1:3353620/35‑1 (MQ=255) aCTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAg < 1:8972767/35‑1 (MQ=255) cTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgt < 1:11257173/35‑1 (MQ=255) cTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgt < 1:20544865/35‑1 (MQ=255) cTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgt < 1:20392555/35‑1 (MQ=255) ttCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgtg < 1:4250234/35‑1 (MQ=255) ttCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgtg < 1:20308774/35‑1 (MQ=255) tCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgtgt < 1:7935520/35‑1 (MQ=255) tCTGCGGCAGTTCAGGATGCTGTTGCAGGTAgtgt < 1:4680144/35‑1 (MQ=255) cTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGtt < 1:9319136/35‑1 (MQ=255) cTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGtt < 1:9634093/35‑1 (MQ=255) tGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTc < 1:15172693/35‑1 (MQ=255) tGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTc < 1:5155386/35‑1 (MQ=255) tGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTc < 1:4720063/35‑1 (MQ=255) tGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTc < 1:2231749/35‑1 (MQ=255) gCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCg < 1:4481417/35‑1 (MQ=255) gCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCg < 1:17939313/35‑1 (MQ=255) cGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGa < 1:5633654/35‑1 (MQ=255) cGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGa < 1:12629433/35‑1 (MQ=255) cGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGa < 1:636998/35‑1 (MQ=255) cGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGa < 1:15573947/35‑1 (MQ=255) gCAGTTCAGGATGCTGTTGCATGTAGTGTTCGAAg > 1:16857661/1‑35 (MQ=255) gCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAg < 1:6557219/35‑1 (MQ=255) gCAGTTCAGGATGCTGTTGCAGGGAGGGTTTGAAg > 1:19308855/1‑35 (MQ=25) cAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGt > 1:10377691/1‑35 (MQ=255) cAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGt < 1:8609927/35‑1 (MQ=255) cAGTTCAGGATGCTGTTGCAGGTAGGGTTCGAAGt > 1:16899682/1‑35 (MQ=255) cAGTTCAGGATGCTGTTGCAGGTAGGGTTCGAAGt > 1:5358881/1‑35 (MQ=255) aGTTCAGGATGCTGTTGCAGGTAGTGTTTGAAgat > 1:20391403/1‑33 (MQ=37) aGTTCAGGATGCTGTTGCAGGTAGGGTTCGAAGtt > 1:3185467/1‑35 (MQ=255) aGTTCAGGATGCTGTTGCAGGTAGGGTTCGAAGtt > 1:18038285/1‑35 (MQ=255) gTTCAGGATGCTGTTGCAGGTAGTGTTTGAAGTTg > 1:16434707/1‑35 (MQ=255) gTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTg < 1:8176326/35‑1 (MQ=255) gTTCAGGATGCTGTTGCAGGGAGGGTTCGGAGGTg > 1:14836150/1‑35 (MQ=16) | AATGGAGGTTCCATCGCAATCAACTTCTGCGGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTG > REL606/3069587‑3069655 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |