New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 462517 = | 55 (0.540) | 11 (0.120) | 4/42 | NT | 17.3% | coding (363/528 nt) | priC | primosomal replication protein N'' |
? | REL606 | 1306336 = | 57 (0.630) | intergenic (‑97/+274) | cls/kch | cardiolipin synthetase/voltage‑gated potassium channel |
GCGTAAACGTATTCAGCATCAGGATTTTGAGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/462553‑462517 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGGCGGGGGTATAATGACCATTCTGTTAT > REL606/1306336‑1306364 GCGTAAACGTATTCAGCATCAGGATTTTGAGCGGC > 1:19098051/1‑35 GCGTAAACGTATTCAGCATCAGGATTTTGAGCGGC < 1:18953887/35‑1 GCGTAAACGTATTCAGCATCAGGATTTTGAGCGGC > 1:19851371/1‑35 GCGTAAACGTATTCAGCATCAGGATTTTGAGCGGC > 1:20179423/1‑35 GCGTAAACGTATTCAGCATCAGGATTTTGAGCGGC < 1:16471888/35‑1 GCGTAAACGTATTCAGCATCAGGATTTTGAGCGGC < 1:14496563/35‑1 GCGTAAACGTATTCAGCATCAGGATTTTGAGCGGC < 1:6368803/35‑1 CGTAAACGTATTCAGCATCAGGATTTTGAGCGGCG > 1:15986429/1‑35 CGTAAACGTATTCAGCATCAGGATTTTGAGCGGCG > 1:16871348/1‑35 CGTAAACGTATTCAGCATCAGGATTTTGAGCGGCG > 1:8050173/1‑35 CGTAAACGTATTCAGCATCAGGATTTTGAGCGGCG > 1:1821285/1‑35 CGTAAACGTATTCAGCATCAGGATTTTGAGCGGCG > 1:18440938/1‑35 CGTAAACGTATTCAGCATCAGGATTTTGAGCGGCG < 1:9013254/35‑1 GTAAACGTATTCAGCATCATGATTTTGAGCGGCGG > 1:14077298/1‑35 GTAAACGTATTCAGCATCAGGATTTTGAGCGGCGG > 1:1383098/1‑35 GTAAACGTATTCAGCATCAGGATTTTGAGCGGCGG > 1:2177073/1‑35 GTAAACGTATTCAGCATCAGGATTTTGAGCGGCGG < 1:1153317/35‑1 TAAACGTATTCAGCATCAGGATTTTGAGCGGCGGG > 1:244715/1‑35 TAAACGTATTCAGCATCAGGATTTTGAGCGGCGGG > 1:19165909/1‑35 AAACGTATTCAGCATCAGGATTTTGAGCGGCGGGG > 1:16507881/1‑35 AAACGTATTCAGCATCAGGATTTTGAGCGGCGGGG > 1:9142912/1‑35 AAACGTATTCAGCATCAGGATTTTGAGCGGCGGGG > 1:343702/1‑35 AACGTATTCAGCATCAGGATTTTGAGCGGCGGGGa > 1:19625245/1‑34 AACGTATTCAGCATCAGGATTTTGAGCGGCGGGGG > 1:18008319/1‑35 ACGTATTCAGCATCAGGATTTTGAGCGGCGGGtac > 1:849742/1‑32 ACGTATTCAGCATCAGGATTTTGAGCGGCGGGGGC > 1:4601477/1‑35 CGTATTCAGCATCAGGATTTTGAGCGGCGGGGcac > 1:4482473/1‑32 CGTATTCAGCATCAGGATTTTGAGCGGCGGGGACG > 1:17459896/1‑35 GTATTCAGCATCAGGATTTTGAGCGGCGGGGGGGG > 1:13033854/1‑35 GTATTCAGCATCAGGATTTTGAGCGGCGGGGACGG > 1:14868059/1‑35 TATTCAGCATCAGGATTTTGAGCGGCGGGGGGGGG > 1:18997499/1‑35 TATTCAGCATCAGGATTTTGAGCGGCGGGGACGGG > 1:17701861/1‑35 ATTCAGCATCAGGATTTTGAGCGGCGGGGGCGGGG > 1:9474490/1‑35 ATTCAGCATCAGGATTTTGAGCGGCGGGGGCGGGG > 1:2793682/1‑35 TTCAGCATCAGGATTTTGAGCGGCGGGGGGGGGGG > 1:2714542/1‑35 TTCAGCATCAGGATTTTGAGCGGCGGGGGCGGGGG > 1:7863980/1‑35 TCAGCATCAGGATTTTGAGCGGCGGGGGGGGGGGa > 1:3438533/1‑34 TCAGCATCAGGATTTTGAGCGGCGGGGGCGGGGGa > 1:8871800/1‑34 TCAGCATCAGGATTTTGAGCGGCGGGGGCGCGGGg > 1:12089058/1‑34 CGGCGGGGGCGGGGTTATAATGACCATTCTGTTAT < 1:12017805/35‑1 GCGTAAACGTATTCAGCATCAGGATTTTGAGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/462553‑462517 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGGCGGGGGTATAATGACCATTCTGTTAT > REL606/1306336‑1306364 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |