Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | REL606 | 200,540 | C→T | 5.9% | L385F (CTT→TTT) | yaeL → | zinc metallopeptidase |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 200,540 | 0 | C→T | 5.9% | 11.3 0.0 ‑0.0 | 153 | L385F (CTT→TTT) | yaeL | zinc metallopeptidase |
Reads supporting (aligned to +/- strand): new base (4/5): ref base (60/84): total (64/89) | ||||||||||
Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.61e-01 |
Only 100 of 172 total aligned reads displayed.
ACTCGGGGTTGTTTATTACCTGCCGTTTCTTGCGCTTATTAGCGTGAACTTAGGGATAATTAACCTGTT > REL606/200506‑200574 | cTCGGGGTTGTTTATTACCTGCCGTTTCTTGCGCt > 1:4310794/1‑35 (MQ=255) cTCGGGGTTGTTTATTACCTGCCGTTTCTTGCGCt > 1:182494/1‑35 (MQ=255) tCGGGGTTGTTTATTCCCTGCCGTTTCTTGCGTtt < 1:17445357/35‑1 (MQ=37) tCGGGGTTGTTTATTACCTGCCGTTTCTTGCGCtt > 1:4562648/1‑35 (MQ=255) ggggtTTGTTTATTCCCTGCCGTTTCTTGCGCtta < 1:6568817/34‑1 (MQ=25) cGGGTTTTTTTATTCCCTGCCGTTTCTTGCGCtta < 1:18700411/35‑1 (MQ=25) cGGGGTTGTTTATTCCCTGCCGTTTCTTGCGCtta < 1:8959641/35‑1 (MQ=255) cGGGGTTGTTTATTACCTGCCGTTTCTTGCGCtta > 1:3111840/1‑35 (MQ=255) ggggTTGTTTATTACCTGCCGTTTCTTGCGCttat > 1:329602/1‑35 (MQ=255) ggtttgttTATTCCCTGCCGTTTCTTGCGCttatt < 1:7667097/32‑1 (MQ=37) ggtttgttTATTACCTGCCGTTTCTTGCGCttatt > 1:8823015/4‑35 (MQ=255) gggTTGTTTATTACCTGCCGTTTCTTGCGCttatt > 1:10581711/1‑35 (MQ=255) gggTTGTTTATTACCTGCCGTTTCTTGCGCttatt > 1:494595/1‑35 (MQ=255) gggTTGTTTATTACCTGCCGTTTCTTGCGCttatt < 1:6776674/35‑1 (MQ=255) ggTTGTTTATTACCTGCCGGTTCTTGCGCttttta > 1:19470836/1‑35 (MQ=37) tttgttTATTACCTGCCGTTTCTTGCGCTTATTAg < 1:14841305/34‑1 (MQ=255) tttgttTATTACCTGCCGTTTCTTGCGCTTATTAg < 1:13863930/34‑1 (MQ=255) gttgttTATTACCTGCCGTTTCTTGCGCTTATTAg > 1:2967075/1‑35 (MQ=255) gttgttTATTACCTGCCGTTTCTTGCGCTTATTAg > 1:16911207/1‑35 (MQ=255) ttgttTATTCCCTGCCGTTTCTTGCGCTTATTAGc < 1:7172478/35‑1 (MQ=255) ttgttTATTCCCTGCCGTTTCTTGCGCTTATTAGc < 1:3692733/35‑1 (MQ=255) ttgttTATTACCTGCCGTTTCTTGCGCTTATTAGc > 1:20341222/1‑35 (MQ=255) tgttTATTCCCTGCCGTTTCTTGCGCTTATTAGCg < 1:915901/35‑1 (MQ=255) tgttTATTACCTGCCGTTTCTTGCGTTTATTAGCg < 1:16453471/35‑1 (MQ=255) tgttTATTACCTGCCGTTTCTTGCGCTTATTAGCg > 1:17795633/1‑35 (MQ=255) ttttATCCCCTGCCGTTTCTTGCGCTTATTAGCGt < 1:2159550/34‑1 (MQ=25) gttTATTCCCTGCCGTTTCTTGCGCTTATTAGCGt < 1:14351112/35‑1 (MQ=255) gttTATTCCCTGCCGTTTCTTGCGCTTATTAGCGt < 1:5287180/35‑1 (MQ=255) gttTATTCCCTGCCGTTTCTTGCGCTTATTAGCGt < 1:6258/35‑1 (MQ=255) gttTATTACCTGCCGTTTCTTGCGCTTATTAGCGt > 1:1034937/1‑35 (MQ=255) tttATTCCCTGCCGTTTCTTGCGCTTATTAGCGTg < 1:2811160/35‑1 (MQ=255) tttATTACCTGCCGTTTCTTGCGCTTATTAGCGTg > 1:18333046/1‑35 (MQ=255) ttattgCCTGCCGTTTCTTGCGCTTATTAGCGTGa < 1:20219361/35‑1 (MQ=255) ttattaCCTGCCGTTTCTTGCGCTTATTAGCGTGa > 1:13720420/1‑35 (MQ=255) tattaCCTGCCGTTTCTTGCGCTTATTAGCGTGaa > 1:8440493/1‑35 (MQ=255) attcCCTGCCGTTTCTTGCGCTTATTAGCGTGGAc < 1:14833818/35‑1 (MQ=37) attcCCTGCCGTTTCTTGCGCTTATTAGCGTGAAc < 1:404180/35‑1 (MQ=255) attcCCTGCCGTTTCTTGCGCTTATTAGCGTGAAc < 1:14933968/35‑1 (MQ=255) ttaCCTGCCGTTTCTTGCGCTTATTAGCGTGAACt > 1:14263645/1‑35 (MQ=255) tcccTGCCGTTTCTTGCGCTTATTAGCGTGAACtt < 1:17225312/33‑1 (MQ=255) tcccTGCCGTTTCTTGCGCTTATTAGCGTGAACtt < 1:8328741/33‑1 (MQ=255) taCCTGCCGTTTCTTGCGCTTATTAGAGTGAACtt < 1:19062146/35‑1 (MQ=255) cccTGCCGTTTCTTGCGCTTATTAGCGTGAACTTa < 1:16665852/34‑1 (MQ=255) cccTGCCGTTTCTTGCGCTTATTAGCGTGAACTTa < 1:15264053/34‑1 (MQ=255) aCCTGCCGTTTCTTGCGCTTATTAGCGTGAACTTa > 1:14692554/1‑35 (MQ=255) ccTGCCGTTTCTTGCGCTTATTAGCGTGAACTTAg < 1:11931058/35‑1 (MQ=255) ccTGCCGTTTCTTGCGCTTATTAGCGTGAACTTAg > 1:5880311/1‑35 (MQ=255) ccTGCCGTTTCTTGCGCTTATTAGCGTGAACTTAg > 1:10701733/1‑35 (MQ=255) ccTGCCGTTTCTTGCGCTTATTAGCGTGAACTTAg > 1:13266352/1‑35 (MQ=255) ccTGCCGTTTCTTGCGCTTATTAGCGTGAACTTAg > 1:19198160/1‑35 (MQ=255) cTGCCGTTTCTTGCGCTTATTAGCGTGAACTTAgg < 1:10037848/35‑1 (MQ=255) cTGCCGTTTCTTGCGCTTATTAGCGTGAACTTAgg < 1:13432450/35‑1 (MQ=255) tGCCGTTTCTTGCGCTTATTAGCGTGAACTTAggg < 1:11527405/35‑1 (MQ=255) tGCCGTTTCTTGCGCTTATTAGCGTGAACTTAggg < 1:1549718/35‑1 (MQ=255) gCCGTTTCTTGCGCTTATTAGCGTGAACTTAGGGa > 1:8634716/1‑35 (MQ=255) gCCGTTTCTTGCGCTTATTAGCGTGAACTTAGGGa < 1:311601/35‑1 (MQ=255) gCCGTTTCTTGCGCTTATTAGCGTGAACTTAGGGa > 1:15423011/1‑35 (MQ=255) ccGTTTCTTGCGTTTATTAGCGTGAACTTAGGGAt > 1:18955868/1‑35 (MQ=255) cGTTTCTTGCGCTTATTAGCGTGAACTTAGGGATa > 1:9878254/1‑35 (MQ=255) cGTTTCTTGCGCTTATTAGCGTGAACTTAGGGATa > 1:10797717/1‑35 (MQ=255) cGTTTCTTGCGCTTATTAGCGTGAACTTAGGGATa > 1:12256527/1‑35 (MQ=255) cGTTTCTTGCGCTTATTAGCGTGAACTTAGGGATa > 1:208946/1‑35 (MQ=255) cGTTTCTTGCGCTTATTAGCGTGAACTTAGCGATa > 1:13182437/1‑35 (MQ=255) gTTTCTTGCGTTTATTAGCGTGAACTTAGGGATaa < 1:7757001/35‑1 (MQ=255) gTTTCTTGCGCTTATTAGCGTGAACTTAGGGATaa > 1:7481256/1‑35 (MQ=255) gTTTCTTGCGCTTATTAGCGTGAACTTAGGGATaa > 1:16445862/1‑35 (MQ=255) gTTTCTTGCGCTTATTAGCGTGAACTTAGGGATaa > 1:14575109/1‑35 (MQ=255) gTTTCTTGCGCTTATTAGCGTGAACTTAGGGATaa > 1:7004092/1‑35 (MQ=255) tttCTTGCGCTTATTAGCGTGAACTTANGGATAAt < 1:5713630/35‑1 (MQ=255) tttCTTGCGCTTATTAGCGTGAACTTAGGGATAAt > 1:2669298/1‑35 (MQ=255) tttCTTGCGCTTATTAGCGTGAACTTAGGGATAAt < 1:12261567/35‑1 (MQ=255) ttCTTGCGCTTATTAGCGTGAACTTAGGGATAAtt < 1:2204933/35‑1 (MQ=255) ttCTTGCGCTTATTAGCGTGAACTTAGGGATAAtt < 1:20382676/35‑1 (MQ=255) ttCTTGCGCTTATTAGCGTGAACTTAGGGATAAtt < 1:3922877/35‑1 (MQ=255) ttCTTGCGCTTATTAGCGTGAACTTAGGGATAAtt < 1:13406729/35‑1 (MQ=255) ttCTTGCGCTTATTAGAGTGAACTTAGGGATAAtt < 1:19088911/35‑1 (MQ=255) tCTTGCGTTTATTAGCGTGAACTTAGGGATAATTa < 1:256838/35‑1 (MQ=255) tCTTGCGCTTATTAGCGTGAACTTAGGGATAATTa < 1:5095913/35‑1 (MQ=255) tCTTGCGCTTATTAGCGTGAACTTAGGGATAATTa > 1:5540806/1‑35 (MQ=255) tCTTGCGCTTATTAGCGTGAACTTAGGGATAATTa < 1:13130608/35‑1 (MQ=255) tCTTGCGCTTATTAGCGTGAACTTAGGGATAATTa > 1:18768811/1‑35 (MQ=255) tCTTGCGCTTATTAGCGTGAACTTAGGGATAATTa < 1:11300148/35‑1 (MQ=255) tCTTGCGCTTATTAGCGTGAACTTAGGGATAATTa < 1:200884/35‑1 (MQ=255) cTTGCGCTTATTAGCGTGAACTTAGGGATAATTaa > 1:13796221/1‑35 (MQ=255) ttGCGCTTATTAGCGTGAACTTAGGGATAATTAAc > 1:2371477/1‑35 (MQ=255) ttGCGCTTATTAGCGTGAACTTAGGGATAATTAAc > 1:10167284/1‑35 (MQ=255) ttGCGCTTATTAGCGTGAACTTAGGGATAATTAAc > 1:8502549/1‑35 (MQ=255) ttGCGCTTATTAGCGTGAACTTAGGGATAATTAAc < 1:7848494/35‑1 (MQ=255) ttGCGCTTATTAGCGTGAACTTAGGGATAATTAAc > 1:16413632/1‑35 (MQ=255) ttGCGCTTATTAGCGTGAACTTAGGGATAATTAAc < 1:18070353/35‑1 (MQ=255) ttGCGCTTATTAGCGTGAACTTAGGGATAATTAAc > 1:12641723/1‑35 (MQ=255) tGCGCTTATTGGCGTGAACTTAGGGATAATTAAcc < 1:889699/35‑1 (MQ=255) tGCGCTTATTAGCGTGAACTTAGGGATAATTAAcc > 1:11815698/1‑35 (MQ=255) gcgcTTATTAGCGTGAACTTAGGGATAATTAACCt < 1:14335513/35‑1 (MQ=255) gcgcTTATTAGCGTGAACTTAGGGATAATTAACCt < 1:19759108/35‑1 (MQ=255) gcgcTTATTAGCGTGAACTTAGGGATAATTAACCt < 1:18713172/35‑1 (MQ=255) gcgcTTATTAGCGTGAACTTAGGGATAATTAACCt < 1:6475976/35‑1 (MQ=255) cgcTTATTAGCGTGAACTTAGGGATAATTAACCTg < 1:1260417/35‑1 (MQ=255) gcTTATTAGCGTGAACTTAGGGATAATTAACCTGt < 1:14553579/35‑1 (MQ=255) gcTTATTAGCGTGAACTTAGGGATAATTAACCTGt > 1:1724743/1‑35 (MQ=255) | ACTCGGGGTTGTTTATTACCTGCCGTTTCTTGCGCTTATTAGCGTGAACTTAGGGATAATTAACCTGTT > REL606/200506‑200574 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |