Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,454,489 | IS150 (+) +4 bp | 38.1% | coding (342‑345/561 nt) | yrfE ← | ADP‑ribose diphosphatase |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3454489 = | 74 (0.860) | 46 (0.450) | 30/48 | NT | 34.1% | coding (345/561 nt) | yrfE | ADP‑ribose diphosphatase |
? | REL606 | = 3652533 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 3454492 | 74 (0.860) | 45 (0.440) | 28/48 | NT | 33.6% | coding (342/561 nt) | yrfE | ADP‑ribose diphosphatase |
? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region |
ATTCATTTTGCTGGAAAAATAAGACGGTGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3454459‑3454492 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAA > REL606/3651091‑3651120 ATTCATTTTGCTGGAAAAATAAGACGGTGCCATGT < 1:9705337/35‑1 ATTCATTTTGCTGGAAAAATAAGACGGTGCCATGT < 1:861014/35‑1 ATTCATTTTGCTGGAAAAATAAGACGGTGCCATGT > 1:6719122/1‑35 TTCATTTTGCTGGAAAAATAAGACGGTGCCATGTG < 1:8635056/35‑1 TCATTTTGCTGGAAAAATAAGACGGTGCCATGTGT < 1:10449862/35‑1 TCATTTTGCTGGAAAAATAAGACGGTGCCATGTGT > 1:5674097/1‑35 TCATTTTGCTGGAAAAATAAGACGGTGCCATGTGT < 1:4579022/35‑1 TCATTTTGCTGGAAAAATAAGACGGTGCCATGTGT > 1:13480022/1‑35 TCATTTTGCTGGAAAAATAAGACGGTGCCATGTGT > 1:17079167/1‑35 CATTTTGTTGGAAAAATAAGACGGTGCCATGTGTA < 1:10441193/35‑1 CATTTTGCTGGAAAAATAAGACGGTGCCATGTGTA < 1:7406366/35‑1 CATTTTGCTGGAAAAATAAGACGGTGCCATGTGTA < 1:16347094/35‑1 ATTTTGCTGGAAAAATAAGACGGTGCCATGTGTAC > 1:8423419/1‑35 ATTTTGCTGGAAAAATAAGACGGTGCCATGTGTAC > 1:3949894/1‑35 TTTTGCTGGAAAAATAAGACGGTGCCATGTGTACT > 1:4733628/1‑35 TTTTGCTGGAAAAATAAGACGGTGCCATGTGTACT > 1:19152979/1‑35 TTTTGCTGGAAAAATAAGACGGTGCCATGTGTACT < 1:10163694/35‑1 TTTTGCTGGAAAAATAAGACGGTGCCATGTGTACT < 1:11307199/35‑1 TTTGCTGGAAAAATAAGACGGTGCCATGTGTGCTG < 1:12758547/35‑1 TTTGCTGGAAAAATAAGACGGTGCCATGTGTACTG > 1:9550514/1‑35 TTTGCTGGAAAAATAAGACGGTGCCATGTGTACTG < 1:4738200/35‑1 TTTGCTGGAAAAATAAGACGGTGCCATGTGTACTG > 1:15309076/1‑35 TTGCTGGAAAAATAAGACGGTGCCATGTGTACTGC < 1:6697027/35‑1 TTGCTGGAAAAATAAGACGGTGCCATGTGTACTGC < 1:5111721/35‑1 TGCTGGAAAAATAAGACGGTGCCATGTGTACTGCA > 1:1210160/1‑35 TGCTGGAAAAATAAGACGGTGCCATGTGTACTGCA < 1:3084014/35‑1 TGCTGGAAAAATAAGACGGTGCCATGTGTACTGCA > 1:2165894/1‑35 GCTGGAAAAATAAGACGGTGCCATGTGTACTGCAC > 1:15301996/1‑35 CTGGAAAAATAAGACGGTGCCATGTGTACTGCACC > 1:121325/1‑35 GGAAAAATAAGACGGTGCCATGTGTACTGCACCCA < 1:14903304/35‑1 GGAAAAATAAGACGGTGCCATGTGTACTGCACCCA < 1:17971483/35‑1 GAAAAATAAGACGGTGCCATGTGTACTGCACCCAT < 1:13458127/35‑1 AAAAATAAGACGGTGCCATGTGTACTGCACCCATT > 1:16029015/1‑35 AAAATAAGACGGTGCCATGTGTACTGCACCCATTT > 1:10919310/1‑35 AAAATAAGACGGTGCCATGTGTACTGCACCCATTT > 1:19633817/1‑35 AAAATAAGACGGTGCCATGTGTACTGCACCCATTT > 1:7713899/1‑35 AAAATAAGACGGTGCCATGTGTACTGCACCCATTT > 1:6299706/1‑35 AAAATAAGACGGTGCCATGTGTAATGCACCCATTT < 1:9556402/35‑1 AAATAAGACGGTGCCATGTGTACTGCACCCCTTTT > 1:2125377/1‑35 AAATAAGACGGTGCCATGTGTACTGCACCCATTTT < 1:18011737/35‑1 AAATAAGACGGTGCCATGTGTACTGCACCCATTTT > 1:1884637/1‑35 AAATAAGACGGTGCCATGTGTACTGCACCCATTTT < 1:3365081/35‑1 AAATAAGACGGTGCCATGTGTACTGCACCCATTTT > 1:1484692/1‑35 AATAAGACGGTGCCATGTGTACTGCACCCATTTTG > 1:16988092/1‑35 ATAAGACGGTGCCATGTGTACTGCACCCATTTTGT < 1:1381793/35‑1 ATAAGACGGTGCCATGTGTACTGCACCCATTTTGT > 1:2719250/1‑35 TAAGACGGTGCCATGTGTACTGCACCCATTTTGTT > 1:3629887/1‑35 TAAGACGGTGCCATGTGTACTGCACCCATTTTGTT > 1:7679007/1‑35 AAGACGGTGCCATGTGTACTGCACCCATTTTGTTG > 1:5586778/1‑35 AAGACGGTGCCATGTGTACTGCACCCATTTTGTTG < 1:8915071/35‑1 AGACGGTGCCATGTGTACTGCACCCATTTTGTTGG < 1:17016971/35‑1 AGACGGTGCCATGTGTACTGCACCCATTTTGTTGG < 1:16889598/35‑1 AGACGGTGCCATGTGTACTGCACCCATTTTGTTGG < 1:11005091/35‑1 GACGGTGCCATGTGTACTGCACCCATTTTGTTGGA > 1:4052140/1‑35 GACGGTGCCATGTGTACTGCACCCATTTTGTTGGA > 1:15701857/1‑35 ACGGTGCCATGTGTACTGCACACATTTTGTTGGAC < 1:16860723/35‑1 CGGTGCCATGTGTACTGCACCCATTTTGTTGGACG < 1:9280379/35‑1 GGTGCCATGTGTACTGCACCAATTTTGTTGGACGA < 1:16396284/35‑1 TGCCATGTGTACTGCACCCATTTTGTTCGACGATG > 1:9143687/1‑35 ctgATGTGTACTGCACCCATTTTGTTGGACGATGA < 1:16915897/32‑1 ggATGTGTACTGCACCCATTTTGTTGGACGATGAA < 1:12797365/33‑1 CCATGTGTACTGCACCCATTTTGTTGGACGATGAA < 1:2003550/35‑1 ATTCATTTTGCTGGAAAAATAAGACGGTGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3454459‑3454492 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAA > REL606/3651091‑3651120 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |