New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 679401 | 75 (0.730) | 6 (0.070) | 3/38 | NT | 13.9% | intergenic (‑174/+207) | metT/asnB | tRNA‑Met/asparagine synthetase B |
? | REL606 | 4198479 = | 15 (0.180) | coding (341/1737 nt) | aceK | bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
CTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGC > REL606/4198459‑4198513 | gtGTCGTTTATTTGCCCACCGCTCGCTTACTCCCg < 1:19222779/34‑1 (MQ=25) tctgTTATTTGACCACCGCTCGCTTAATCCCGAGc > 1:10421210/4‑35 (MQ=37) cGGTTATTTGACCACCGCTCGCTTACTCCCGAGCg > 1:16114756/1‑35 (MQ=255) cGGTTATTTGACCACCGCTCGCTTACTCCCGAGCg > 1:11103082/1‑35 (MQ=255) ttttATTTCCCCACCGCTCGCTTACTCCCGAGCgg < 1:10528971/33‑1 (MQ=25) tgttttttccccaccGCTCGCTTACTCCCGAGCgg < 1:7807670‑M2/20‑1 (MQ=255) gtttttttccccaccGCTCGCTTACTCCCGAGCgg < 1:17571849‑M2/20‑1 (MQ=255) gtttttttccccaccGCTCGCTTACTCCCGAGCgg < 1:16845609‑M2/20‑1 (MQ=255) ggTTATTTGACCACCGCTCGCTTACTCCCGAGctg > 1:1278487/1‑33 (MQ=255) ggTTATTTGACCACCGCTCGCTTACTCCCGAGCgg > 1:1492608/1‑35 (MQ=255) ggTTATTTGACCACCGCTCGCTTACTCCCGAGCgg > 1:2582484/1‑35 (MQ=255) gTTATTTGACCACCGCTCGCTTACTCCCGAGCGGc > 1:5619091/1‑35 (MQ=255) gTTATTTGACCACCGCTCGCTTACTCCCGAGCGGc > 1:12470989/1‑35 (MQ=255) gTTATTTGACCACCGCTCGCTTACTCCCGAGCGGc > 1:18458422/1‑35 (MQ=255) ttttttccccaccGCTCGCTTACTCCCGAGCGGCt < 1:2158653‑M2/22‑1 (MQ=255) tttttcccccaccGCTCGCTTACTCCCGAGCGGCt < 1:12673570‑M2/22‑1 (MQ=255) ttATTTGACCACCGCTCGCTTACTCCCGAGCGGCt > 1:12660878/1‑35 (MQ=255) tATTTGCCCACCGCTCGCTTACTCCAGAGCGGCtt < 1:8541692/35‑1 (MQ=37) tttgccccaccGCTCGCTTACTCCCGAGCGGCttt < 1:5190486‑M2/24‑1 (MQ=255) atttccccaccGCTCGCTTACTCCCGAGCGGCttt < 1:15143312‑M2/24‑1 (MQ=255) aTTTGACCACCGCTCGCTTACTCCCGAGCGGCttt > 1:2483800/1‑35 (MQ=255) aTTTGACCACCGCTCGCTTACTCCCGAGCGGCttt > 1:3965640/1‑35 (MQ=255) tttGACCACCGCTCGCTTACTCCCGAGCGGCtttt > 1:2495648/1‑35 (MQ=255) tttGACCACCGCTCGCTTACTCCCGAGCGGCtttt > 1:12851137/1‑35 (MQ=255) tttGACCACCGCTCGCTTACTCCCGAGCGGCtttt > 1:16367558/1‑35 (MQ=255) tttGACCACCGCTCGCTTACTCCCGAGCGGCtttt > 1:10652830/1‑35 (MQ=255) tttGACCACCGCTCGCTTACTCCCGAGCGGCtttt > 1:1752958/1‑35 (MQ=255) tttGACCACCGCTCGCTTACTCCCGAGCGGCtttt > 1:9412296/1‑35 (MQ=255) ttgcccaccGCTCGCTTACTCCCGAGCGGCttttt < 1:17702553‑M2/26‑1 (MQ=255) ttccccaccGCTCGCTTACTCCCGAGCGGCttttt < 1:18925921‑M2/26‑1 (MQ=255) ccgccaccGCTCGCTTACTCCCGAGCGGCTTTTTa < 1:9636249‑M2/27‑1 (MQ=255) ccccccccGCTCGCTTACTCCCGAGCGGCTTTTTa < 1:8800274‑M2/27‑1 (MQ=255) gACCACCGCTCGCTTACTCCCGAGCGGCTTTTTAt > 1:19988467/1‑35 (MQ=255) gACCACCGCTCGCTTACTCCCGAGCGGCTTTTTAt > 1:2324321/1‑35 (MQ=255) gACCACCGCTCGCTTACTCCCGAGCGGCTTTTTAt > 1:3739586/1‑35 (MQ=255) ccccaccGCTCGCTTACTCCCGAGCGGCTTTTTAt < 1:10364888‑M2/28‑1 (MQ=255) ccccaccGCTCGCTTACTCCCGAGCGGCTTTTTAt < 1:9023181‑M2/28‑1 (MQ=255) ccccaccGCTCGCTTACTCCCGAGCGGCTTTTTAt < 1:16239460‑M2/28‑1 (MQ=255) accaccGCTCGCTTACTCCCGAGCGGCtttttttt > 1:14251434/1‑32 (MQ=255) accaccGCTCGCTTACTCCCGAGCGGCTTTTTATc > 1:19995226/1‑35 (MQ=255) accaccGCTCGCTTACTCCCGAGCGGCTTTTTATc > 1:2681096/1‑35 (MQ=255) ccaccGCTCGCTTACTCCCGAGCGGCTTTTTATCt < 1:20298390‑M2/30‑1 (MQ=255) ccaccGCTCGCTTACTCCCGAGCGGCTTTTTATCt < 1:12855173‑M2/30‑1 (MQ=255) caccGCTCGCTTACTCCCGAGCGGCTTTTTATCtt < 1:10280083‑M2/31‑1 (MQ=255) caccGCTCGCTTACTCCCGAGCGGCTTTTTATCtt < 1:8400006‑M2/31‑1 (MQ=255) cccGCTCGCTTACTCCCGAGCGGCTTTTTATCttt < 1:1148128‑M2/32‑1 (MQ=255) accGCTCGCTTACTCCCGAGCGGCTTTTTATCttt < 1:17905042‑M2/32‑1 (MQ=255) accGCTCGCTTACTCCCGAGCGGCTTTTTATCttt < 1:6249834‑M2/32‑1 (MQ=255) accGCTCGCTTACTCCCGAGCGGCTTTTTATCttt < 1:15247101‑M2/32‑1 (MQ=255) accGCTCGCTTACTCCCGAGCGGCTTTTTATCttt < 1:4841092‑M2/32‑1 (MQ=255) accGCTAGCTTACTCCCGAGCGGCTTTTTATCttt < 1:5207247‑M2/32‑1 (MQ=255) ccGCTCTCTTACTCCCGAGCGGCTTTTTTTCTTTa > 1:6143535/1‑35 (MQ=25) ccGCTCGCTTACTCCCGAGCGGCTTTTTTTCTTTa > 1:13281299‑M2/3‑35 (MQ=255) ccGCTCGCTTACTCCCGAGCGGCTTTTTTTCTTTa > 1:6511164‑M2/3‑35 (MQ=255) ccGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTa < 1:13752492‑M2/33‑1 (MQ=255) ccGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTa > 1:9581365‑M2/3‑35 (MQ=255) ccGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTa < 1:2505439‑M2/33‑1 (MQ=255) cGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAg < 1:3159706‑M2/34‑1 (MQ=255) cGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAg < 1:12454119‑M2/34‑1 (MQ=255) cGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAg < 1:2060379‑M2/34‑1 (MQ=255) gctcgctTACTCCCGAGCGGCTTTTTTTTTTTAgg > 1:7356797/1‑34 (MQ=25) gctcgctTACTCCCGAGCGGCTTTTTTTCTTTAGc > 1:17539659/1‑35 (MQ=255) gctcgctTACTCCCGAGCGGCTTTTTATCTTTAga > 1:15173750/1‑34 (MQ=255) gctcgctTACTCCCGAGCGGCTTTTTATCTTTAGc < 1:288440/35‑1 (MQ=255) gctcgctTACTCCCGAGCGGCTTTTTATCTTTAGc < 1:16362934/35‑1 (MQ=255) gctcgctTACTCCCGAGCGGCTTTTTATCTTTAGc < 1:18618526/35‑1 (MQ=255) | CTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGC > REL606/4198459‑4198513 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |