Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 4,613,019 +TT :: IS150 (+) 100% intergenic (‑16/‑91) smp ← / → serB hypothetical protein/3‑phosphoserine phosphatase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 664686 =NA (NA)139 (1.350) 45/48 NT 100% intergenic (‑77/‑49) gltL/insJ‑2 ATP‑binding protein of glutamate/aspartate transport system; b0652_1/IS150 hypothetical protein
?REL606 = 4613019 0 (0.000)intergenic (‑16/‑90) smp/serB hypothetical protein/3‑phosphoserine phosphatase
* ? REL606 = 3894996NA (NA)114 (1.160) 38/46 NT 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 4613020 = 0 (0.000)intergenic (‑17/‑89) smp/serB hypothetical protein/3‑phosphoserine phosphatase

Only 100 of 155 total aligned reads displayed.

TTTTGTGCGAGCCATCTTCCACCCTTTGAAAATTTGAGACTTAATGTTGCCAGAAGCAATGGATAC  >  REL606/4612989‑4613054
                               |                                  
ttttGTGCGAGCCATCTTCCACCCTTTGAAAAttt                                 >  1:9658674/1‑35 (MQ=255)
 ttaactgtccaactttttggggtcagtacaATTTg                                <  1:10318862‑M2/5‑1 (MQ=255)
 ttaactgtccaactttttggggtcagtacaATTTg                                <  1:20409816‑M2/5‑1 (MQ=255)
 ttaactgtccaactttttggggtcagtacaATTTg                                >  1:15730490‑M2/31‑35 (MQ=255)
 ttaactgtccaactttttggggtcagtacaATTTg                                >  1:15514990‑M2/31‑35 (MQ=255)
  taactgtccaactttttggtgtcagtacaATTTga                               >  1:5461893‑M2/30‑35 (MQ=255)
  taactgtccaactttttggggtcagtacaATTTga                               >  1:3658162‑M2/30‑35 (MQ=255)
  taactgtccaactttttggggtcagtacaATTTga                               >  1:3195388‑M2/30‑35 (MQ=255)
  taactgtccaactttttggggtcagtacaATTTga                               <  1:2624284‑M2/6‑1 (MQ=255)
   aactgtccaactttttggggtcagtacaATTTgag                              >  1:5918453‑M2/29‑35 (MQ=255)
    actgtccaactttttggggtcagtacaATTTgaga                             >  1:4721638‑M2/28‑35 (MQ=255)
      tgtccaactttttggggtcagtacaATTTGAGACt                           >  1:9535572‑M2/26‑35 (MQ=255)
      tgtccaactttttggggtcagtacaATTTGAGACt                           >  1:4789817‑M2/26‑35 (MQ=255)
      tgtccaactttttggggtcagtacaATTTGAGACt                           <  1:19183500‑M2/10‑1 (MQ=255)
      tgtccaactttttggggtcagtacaATTTGAGACt                           >  1:18914345‑M2/26‑35 (MQ=255)
       gtccaactttttggggtcagtacaATTTGAGACtt                          >  1:16163045‑M2/25‑35 (MQ=255)
       gtccaactttttggggtcagtacaATTTGAGACtt                          >  1:19882848‑M2/25‑35 (MQ=255)
        tccaactttttggggtcagtacaATTTGAGACTTa                         >  1:16619529‑M2/24‑35 (MQ=255)
        tccaactttttggggtcagtacaATTTGAGACTTa                         >  1:13985036‑M2/24‑35 (MQ=255)
         ccaactttttggggtcagtacaATTTGAGACTTaa                        <  1:11340229‑M2/13‑1 (MQ=255)
         ccaactttttggggtcagtacaATTTGAGACTTaa                        >  1:3393738‑M2/23‑35 (MQ=255)
          caactttttggggtcagtacaATTTGAGACTTAAt                       <  1:3018392‑M2/14‑1 (MQ=255)
          caactttttggggtcagtacaATTTGAGACTTAAt                       <  1:19312493‑M2/14‑1 (MQ=255)
          caactttttggggtcagtacaATTTGAGACTTAAt                       <  1:14706938‑M2/14‑1 (MQ=255)
          caactttttggggtcagtacaATTTGAGACTTAAt                       <  1:20542024‑M2/14‑1 (MQ=255)
           aactttttggggtcagtacaATTTGAGACTTAATg                      <  1:17747669‑M2/15‑1 (MQ=255)
           aactttttggggtcagtacaATTTGAGACTTAATg                      <  1:11857102‑M2/15‑1 (MQ=255)
           aactttttggggtcagtacaATTTGAGACTTAATg                      >  1:12285274‑M2/21‑35 (MQ=255)
           aactttttggggtcagtacaATTTGAGACTTAATg                      <  1:5694321‑M2/15‑1 (MQ=255)
            acttttttgggtcagtacaATTTGAGACTTAATGt                     >  1:13565287‑M2/20‑35 (MQ=255)
            actttttggggtcagtacaATTTGAGACTTAATGt                     >  1:7390840‑M2/20‑35 (MQ=255)
             ctttttggggtcagtacaATTTGAGACTTAATGtt                    <  1:2520080‑M2/17‑1 (MQ=255)
              tttttggggtcagtacaATTTGAGACTTAATGTTg                   <  1:19462152‑M2/18‑1 (MQ=255)
              tttttggggtcagtacaATTTGAGACTTAATGTTg                   >  1:11473915‑M2/18‑35 (MQ=255)
              tttttggggtcagtacaATTTGAGACTTAATGTTg                   >  1:172011‑M2/18‑35 (MQ=255)
               ttttggggtcagtacaATTTGAGACTTAATGTTGc                  >  1:19355150‑M2/17‑35 (MQ=255)
               ttttggggtcagtacaATTTGAGACTTAATGTTGc                  >  1:3980817‑M2/17‑35 (MQ=255)
               ttttggggtcagtacaATTTGAGACTTAATGTTGc                  >  1:18733452‑M2/17‑35 (MQ=255)
               ttttggggtcagtacaATTTGAGACTTAATGTTGc                  >  1:12442020‑M2/17‑35 (MQ=255)
                tttggggtcagtacaATTTGAGACTTAATGTTGcc                 <  1:10536693‑M2/20‑1 (MQ=255)
                 ttggggtcagtacaATTTGAGACTTAATGTTGCCa                <  1:1735635‑M2/21‑1 (MQ=255)
                 ttggggtcagtacaATTTGAGACTTAATGTTGCCa                <  1:11430297‑M2/21‑1 (MQ=255)
                 ttggggtcagtacaATTTGAGACTTAATGTTGCCa                >  1:12209106‑M2/15‑35 (MQ=255)
                  tggggtcagtacaATTTTAGACTTAATGTTGCCAg               >  1:15914631‑M2/14‑35 (MQ=255)
                  tggggtcagtacaATTTGAGACTTAATGTTGCCAg               >  1:737344‑M2/14‑35 (MQ=255)
                  tggggtcagtacaATTTGAGACTTAATGTTGCCAg               >  1:20490649‑M2/14‑35 (MQ=255)
                  tggggtcagtacaATTTGAGACTTAATGTTGCCAg               <  1:4687073‑M2/22‑1 (MQ=255)
                  tggggtcagtacaATTTGAGACTTAATGTTGCCAg               <  1:8381496‑M2/22‑1 (MQ=255)
                  tggggtcagtacaATTTGAGACTTAATGTTGCCAg               <  1:19455400‑M2/22‑1 (MQ=255)
                  tggggtcagtacaATTTGAGACTTAATGTTGCCAg               <  1:18336024‑M2/22‑1 (MQ=255)
                  tggggtcagtacaATTTGAGACTTAATGTTGCCAg               >  1:18154547‑M2/14‑35 (MQ=255)
                   ggggtcagtacaATTTGAGACTTAATGTTGCCAGa              >  1:12466399‑M2/13‑35 (MQ=255)
                   ggggtcagtacaATTTGAGACTTAATGTTGCCAGa              >  1:9546254‑M2/13‑35 (MQ=255)
                   ggggtcagtacaATTTGAGACTTAATGTTGCCAGa              >  1:4767571‑M2/13‑35 (MQ=255)
                    gggtcagtacaATTTGAGACTTAATGTTGCCAGaa             >  1:17673389‑M2/12‑35 (MQ=255)
                    gggtcagtacaATTTGAGACTTAATGTTGCCAGaa             >  1:6229623‑M2/12‑35 (MQ=255)
                    gggtcagtacaATTTGAGACTTAATGTTGCCAGaa             >  1:7300998‑M2/12‑35 (MQ=255)
                     ggtcagtacaATTTGAGACTTAATGTTGCCAGAAg            <  1:15239159‑M2/25‑1 (MQ=255)
                     ggtcagtacaATTTGAGACTTAATGTTGCCAGAAg            <  1:18181097‑M2/25‑1 (MQ=255)
                     ggtcagtacaATTTGAGACTTAATGTTGCCAGAAg            <  1:8843962‑M2/25‑1 (MQ=255)
                      ntcagtacaATTTGAGACTTAATGTTGCCAGAAGc           >  1:20113342‑M2/10‑35 (MQ=255)
                      gtcagtacaATTTGAGACTTAATGTTGCCAGAAGc           <  1:7243409‑M2/26‑1 (MQ=255)
                      gtcagtacaATTTGAGACTTAATGTTGCCAGAAGc           >  1:8229788‑M2/10‑35 (MQ=255)
                      gtcagtacaATTTGAGACTTAATGTTGCCAGAAGc           <  1:9202841‑M2/26‑1 (MQ=255)
                      gtcagtacaATTTGAGACTTAATGTTGCCAGAAGc           >  1:11355578‑M2/10‑35 (MQ=255)
                      gtcagtacaATTTGAGACTTAATGTTGCCAGAAGc           >  1:12041675‑M2/10‑35 (MQ=255)
                       tcagtacaATTTGAGACTTAGTGTTGCCAGAAGCa          <  1:19754345‑M2/27‑1 (MQ=255)
                        cagtacaATTTGAGACTTAATGTTGCCAGAATCaa         >  1:10272897‑M2/8‑35 (MQ=255)
                        cagtacaATTTGAGACTTAATGTTGCCAGAAGCaa         >  1:10891733‑M2/8‑35 (MQ=255)
                        cagtacaATTTGAGACTTAATGTTGCCAGAAGCaa         >  1:13287058‑M2/8‑35 (MQ=255)
                        cagtacaATTTGAGACTTAATGTTGCCAGAAGCaa         >  1:14522002‑M2/8‑35 (MQ=255)
                        cagtacaATTTGAGACTTAATGTTGCCAGAAGCaa         >  1:20309032‑M2/8‑35 (MQ=255)
                        cagtacaATTTGAGACTTAATGTTGCCAGAAGCaa         >  1:20152168‑M2/8‑35 (MQ=255)
                        cagtacaATTTGAGACTTAATGTTGCCAGAAGCaa         <  1:18029726‑M2/28‑1 (MQ=255)
                        cagtacaATTTGAGACTTAATGTTGCCAGAAGCaa         <  1:18028091‑M2/28‑1 (MQ=255)
                        cagtacaATTTGAGAATTAATGTTGCCAGAAGCaa         >  1:5382088‑M2/8‑35 (MQ=255)
                         agtacaATTTGAGACTTAATGTTGCCAGAAGCAAt        <  1:14256386‑M2/29‑1 (MQ=255)
                         agtacaATTTGAGACTTAATGTTGCCAGAAGCAAt        >  1:19739982‑M2/7‑35 (MQ=255)
                         agtacaATTTGAGACTTAATGTTGCCAGAAGCAAt        >  1:8568626‑M2/7‑35 (MQ=255)
                         agtacaATTTGAGACTTAATGTTGCCAGAAGCAAt        >  1:6821326‑M2/7‑35 (MQ=255)
                         agtacaATTTGAGACTTAATGTTGCCAGAAGCAAt        >  1:6079688‑M2/7‑35 (MQ=255)
                          gtacaATTTGAGACTTAATGTTGCCAGAAGCAATg       >  1:14715167‑M2/6‑35 (MQ=255)
                          gtacaATTTGAGACTTAATGTTGCCAGAAGCAATg       >  1:8352647‑M2/6‑35 (MQ=255)
                           tacaATTTGAGACTTAATGTTGCCAGAAGCAATgg      >  1:18461003‑M2/5‑35 (MQ=255)
                           tacaATTTGAGACTTAATGTTGCCAGAAGCAATgg      >  1:13387911‑M2/5‑35 (MQ=255)
                           tacaATTTGAGACTTAATGTTGCCAGAAGCAATgg      <  1:11793446‑M2/31‑1 (MQ=255)
                            acaATTTGAGACTTAATGTTGCCAGAAGCAATGGa     <  1:18751020‑M2/32‑1 (MQ=255)
                            acaATTTGAGACTTAATGTTGCCAGAAGCAATGGa     >  1:10409626‑M2/4‑35 (MQ=255)
                            acaATTTGAGACTTAATGTTGCCAGAAGCAATGGa     >  1:8691997‑M2/4‑35 (MQ=255)
                            acaATTTGAGACTTAATGTTGCCAGAAGCAATGGa     <  1:1525799‑M2/32‑1 (MQ=255)
                            acaATTTGAGACTTAATGTTGCAAGAAGCAATGGa     <  1:3954488‑M2/32‑1 (MQ=255)
                             caATTTGAGACTTAATGTTGCCAGAAGCAATGGAt    <  1:19111774‑M2/33‑1 (MQ=255)
                             caATTTGAGACTTAATGTTGCCAGAAGCAATGGAt    >  1:6007948‑M2/3‑35 (MQ=255)
                              aATTTGAGACTTAATGTTGCCAGAAGCAATGGATa   >  1:2588737‑M2/2‑35 (MQ=255)
                              aATTTGAGACTTAATGTTGCCAGAAGCAATGGATa   >  1:17221339‑M2/2‑35 (MQ=255)
                              aATTTGAGACTTAATGTTGCCAGAAGCAATGGATa   <  1:10149541‑M2/34‑1 (MQ=255)
                               aTTTGAGACTTAATGTTGCCAGAAGCAATGGATAc  >  1:15274607/1‑35 (MQ=255)
                               aTTTGAGACTTAATGTTGCCAGAAGCAATGGATAc  >  1:16597953/1‑35 (MQ=255)
                               aTTTGAGACTTAATGTTGCCAGAAGCAATGGATAc  <  1:12995944/35‑1 (MQ=255)
                               aTTTGAGACTTAATGTTGCCAGAAGCAATGGATAc  >  1:6412143/1‑35 (MQ=255)
                               |                                  
TTTTGTGCGAGCCATCTTCCACCCTTTGAAAATTTGAGACTTAATGTTGCCAGAAGCAATGGATAC  >  REL606/4612989‑4613054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.