New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1774429 | 43 (0.420) | 8 (0.090) | 4/40 | NT | 14.3% | coding (783/2388 nt) | pheT | phenylalanyl‑tRNA synthetase beta subunit |
? | REL606 | = 2595910 | 60 (0.700) | coding (551/1062 nt) | yphC | predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding |
Only 100 of 129 total aligned reads displayed.
CAATGCGATCTTTATCGAAAGCGTGCATCGGCTGGCCCAGTTCGAGCAGCACATAGTTGGTGACGTCAA > REL606/1774395‑1774463 | cAATGCGATCTTTATCGAAAGCGTGCATCGGCTGG < 1:8450383‑M1/35‑1 (MQ=255) cAATGCGATCTTTATCGAAAGCGTGCATCGGCTGG > 1:7445544‑M1/1‑35 (MQ=255) cAATGCGATCTTTATCGAAAGCGTGCATCGGCTGG < 1:19991068‑M1/35‑1 (MQ=255) cAATGCGATCTTTATCGAAAGCGTGCATCGGCTGG < 1:12979658‑M1/35‑1 (MQ=255) aaTGCGATCTTTATCGAAAGCGTGCATCGGCTGGg > 1:7919196‑M1/1‑34 (MQ=255) aaTGCGATCTTTATCGAAAGCGTGCATCGGCTGGg > 1:20276736‑M1/1‑34 (MQ=255) aaTGCGATCTTTATCGAAAGCGTGCATCGGCTGGg > 1:15122842‑M1/1‑34 (MQ=255) aaTGCGATCTTTATCGAAAGCGTGCATCGGCTGGg > 1:1157368‑M1/1‑34 (MQ=255) aaTGCGATCTTTATCGAAAGCGTGCATCGGCTGGg > 1:14161753‑M1/1‑34 (MQ=255) aTGCGATCTTTATCGAAAGCGTGCATCGGCTGGgg > 1:19607030‑M1/1‑33 (MQ=255) aTGCGATCTTTATCGAAAGCGTGCATCGGCTGGgc > 1:14953498‑M1/1‑33 (MQ=255) tGCGATCTTTATCGAAAGCGTGCATCGGCTGGgcc > 1:10067001‑M1/1‑32 (MQ=255) tGCGATCTTTATCGAAAGCGTGCATCGGCTGGccc < 1:17097878/35‑1 (MQ=255) tGCGATCTTTATCGAAAGCGTGCATCGGCTGGccc < 1:20231159/35‑1 (MQ=255) gCGATCTTTATCGAAAGCGTGCATCGGCTGGggcg > 1:19033125‑M1/1‑31 (MQ=255) gCGATCTTTATCGAAAGCGTGCATCGGCTGGggcg > 1:12213351‑M1/1‑31 (MQ=255) gCGATCTTTATCGAAAGCGTGCATCGGCTGGggcc > 1:15012455‑M1/1‑31 (MQ=255) gCGATCTTTATCGAAAGCGTGCATCGGCTGGCCCa < 1:11000958/35‑1 (MQ=255) gCGATCTTTATCGAAAGCGTGCATCGGCTGGCCCa < 1:5038983/35‑1 (MQ=255) gCGATCTTTATCGAAAGCGTGCATCGGCTGGCCCa < 1:14174745/35‑1 (MQ=255) gCGATCTTTATCGAAAGCGTGCATCGGCTGGCCCa < 1:13400214/35‑1 (MQ=255) cGATCTTTATCGAAAGCGTGCATCGGCTGGCCCAg < 1:19553174/35‑1 (MQ=255) cGATCTTTATCGAAAGCGTGCATCGGCTGGCCCAg < 1:8279578/35‑1 (MQ=255) cGATCTTTATCGAAAGCGTGCATCGGCTGGCCCAg < 1:989191/35‑1 (MQ=255) gATCTTTATCGAAAGCGTGCATCGGCTGGggcggg > 1:1208349‑M1/1‑29 (MQ=255) aTCTTTATCGAAAGCGTGCATCGGCTGGggcgggg > 1:6852737‑M1/1‑28 (MQ=255) aTCTTTATCGAAAGCGTGCATCGGCTGGCCCAGtt < 1:5584489/35‑1 (MQ=255) tCTTTATCGAAAGCGTGCATCGGCTGGCCCAGTTc < 1:10314552/35‑1 (MQ=255) tCTTTATCGAAAGCGTGCATCGGCTGGCCCAGTTc < 1:20066932/35‑1 (MQ=255) tCTTTATCGAAAGCGTGCATCGGCTGGCCCAGTTc < 1:1915737/35‑1 (MQ=255) cTTTATCGAAAGCGTGCATCGGCTGGgggcggtcg > 1:15869106‑M1/1‑26 (MQ=255) cTTTATCGAAAGCGTGCATCGGCTGGGCCGGGTCg > 1:20061850/1‑35 (MQ=25) cTTTATCGAAAGCGTGCATCGGCTGGCCCAGTTCg < 1:5923163/35‑1 (MQ=255) cTTTATCGAAAGCGTGCATCGGCTGGCCCAGTTCg < 1:4557919/35‑1 (MQ=255) tttATCGAAAGCGTGCATCGGCTGGggccggtcgg > 1:9919687‑M1/1‑25 (MQ=255) tttATCGAAAGCGTGCATCGGCTGGggccggtcgg > 1:4390020‑M1/1‑25 (MQ=255) tttATCGAAAGCGTGCATCGGCTGGCCCAGTTCGa < 1:11367121/35‑1 (MQ=255) tttATCGAAAGCGTGCATCGGCTGGCCCAGTTCGa < 1:19908026/35‑1 (MQ=255) ttATCGAAAGCGTGCATCGGCTGGggccggtcggg > 1:11291789‑M1/1‑24 (MQ=255) ttATCGAAAGCGTGCATCGGCTGGCCCAGTTCGag < 1:6506507/35‑1 (MQ=255) tATCGAAAGCGTGCATCTGCTGGCCCAGTTCGggc > 1:3075034/1‑35 (MQ=37) aTCGAAAGCGTGCATCGGCTGGCCCAGTTCGagca < 1:5083317/35‑1 (MQ=255) aTCGAAAGCGTGCATCGGCTGGCCCAGTTCGagca < 1:4344313/35‑1 (MQ=255) aTCGAAAGCGTGCATAGGCTGGCCCAGTTCGagca < 1:20590732/35‑1 (MQ=255) cGAAAGCGTGCATCGGCTGGCCCAGTTCGagcagc < 1:8076138/35‑1 (MQ=255) gAAAGCGTGCATCGGCTGGCCCAGTTCGAgcagca < 1:327471/35‑1 (MQ=255) gAAAGCGTGCATCGGCTGGCCCAGTTCGAgcagca < 1:18022637/35‑1 (MQ=255) aaaGCGTGCATCGGCTGGCCCAGTTCGAGCAGcac < 1:18772763/35‑1 (MQ=255) aaGCGTGCATCGGCTGGCCCAGTTCGAGCAGcaca < 1:5592558/35‑1 (MQ=255) aaGCGTGCATCGGCTGGCCCAGTTCGAGCAGcaca < 1:15228349/35‑1 (MQ=255) aaGCGTGCATCGGCTGGCCCAGTTCGAGCAGcaca < 1:19086987/35‑1 (MQ=255) aGCGTGCATCGGCTGGCCCAGTTCGAGCAGCACAt < 1:19669155/35‑1 (MQ=255) gCGTGCATCGGCTGGCCCAGTTCGAGCAGCACATa < 1:743645/35‑1 (MQ=255) tGCATCGGCTGGCCCAGTTCGAGCAGCACATAGtt < 1:9660823/35‑1 (MQ=255) tGCATCGGCTGGCCCAGTTCGAGCAGCACATAGtt < 1:16970516/35‑1 (MQ=255) tCGGCTGGCCCAGTTCGAGCAGCACATAGTTGGTg < 1:14627632/35‑1 (MQ=255) tCGGCTGGCCCAGTTCGAGCAGCACATAGTTGGTg < 1:3067013/35‑1 (MQ=255) cGGCTGGCCCAGTTCGAGCAGCACATAGTTGGTGa < 1:5866239/35‑1 (MQ=255) ggCTGGCCCAGTTCGAGCAGCACATAGTTGGTGAc > 1:11929538/1‑35 (MQ=255) ggCTGGCCCAGTTCGAGCAGCACATAGTTGGTGAc < 1:8118928/35‑1 (MQ=255) ggCTGGCCCAGTTCGAGCAGCACATAGTTGGTGAc < 1:6410085/35‑1 (MQ=255) ggCTGGCCCAGTTCGAGCAGCACATAGTTGGTGAc < 1:5591369/35‑1 (MQ=255) ggCTGGCCCAGTTCGAGCAGCACATAGTTGGTGAc > 1:3370959/1‑35 (MQ=255) ggCTGGCCCAGTTCGAGCAGCACATAGTTGGGGAc > 1:20275427/1‑35 (MQ=255) gCTGGCCCAGTTCGAGCAGCACATAGTTGGTGACg < 1:16263509/35‑1 (MQ=255) gCTGGCCCAGTTCGAGCAGCACATAGTTGGTGACg > 1:73460/1‑35 (MQ=255) gCTGGCCCAGTTCGAGCAGCACATAGTTGGTGACg > 1:5939726/1‑35 (MQ=255) gCTGGCCCAGTTCGAGCAGCACATAGTTGGTGACg < 1:16283882/35‑1 (MQ=255) gCTGGCCCAGTTCGAGCAGCACATAGTTGGTGACg > 1:8094310/1‑35 (MQ=255) gCTGGCCCAGTTCGAGCAGCACATAGTTGGTGACg > 1:8579297/1‑35 (MQ=255) gCTGGCCCAGTTCGAGCAGCACATAGTTGGTGACg > 1:3348561/1‑35 (MQ=255) cTGGggccggtcggcgtgatggcgatgatgctggc < 1:11373628‑M1/35‑32 (MQ=255) cTGGggccggtcggcgtgatggcgatgatgctggc < 1:15268549‑M1/35‑32 (MQ=255) cTGGggccggtcggcatgatggcgatgatgctggc < 1:12690644‑M1/35‑32 (MQ=255) cTGGggccggtcggcatgatggcgatgatgctggc > 1:783797‑M1/1‑4 (MQ=255) cTGGCCCAGTTCGAGCAGCACATAGTTGGTGACGt > 1:17098782/1‑35 (MQ=255) cTGGCCCAGTTCGAGCAGCACATAGTTGGTGACGt > 1:11604515/1‑35 (MQ=255) cTGGCCCAGTTCGAGCAGCACATAGTTGGTGACGt > 1:7506061/1‑35 (MQ=255) cTGGCCCAGTTCGAGCAGCACATAGTTGGTGACGt > 1:9645324/1‑35 (MQ=255) tGGggccggtcggcatgatggcgatgatgctggcg < 1:11533596‑M1/35‑33 (MQ=255) tGGggccggtcggcatgatggcgatgatgctggcg < 1:17601995‑M1/35‑33 (MQ=255) tGGCCCAGTTCGAGCAGCACATAGTTGGTGACGTc < 1:9786818/35‑1 (MQ=255) tGGCCCAGTTCGAGCAGCACATAGTTGGTGACGTc < 1:17920527/35‑1 (MQ=255) tGGCCCAGTTCGAGCAGCACATAGTTGGTGACGTc > 1:14586234/1‑35 (MQ=255) tGGCCCAGTTCGAGCAGCACATAGTTGGTGACGTc < 1:2280908/35‑1 (MQ=255) tGGCCCAGTTCGAGCAGCACATAGTTGGTGACGTc > 1:17850456/1‑35 (MQ=255) ggCCCAGTTCGAGCAGCACATAGTTGGTGACGTca < 1:1492640/35‑1 (MQ=255) ggCCCAGTTCGAGCAGCACATAGTTGGTGACGTca < 1:10441298/35‑1 (MQ=255) ggCCCAGTTCGAGCAGCACATAGTTGGTGACGTca > 1:18595912/1‑35 (MQ=255) ggCCCAGTTCGAGCAGCACATAGTTGGTGACGTca > 1:18481238/1‑35 (MQ=255) gggccggtcggcatgatggcgatgatgctggcgaa < 1:12168262‑M1/35‑35 (MQ=255) gggccggtcggcatgatggcgatgatgctggcgaa < 1:5283613‑M1/35‑35 (MQ=255) gggccggtcggcatgatggcgatgatgctggcgaa > 1:5315485‑M1/1‑1 (MQ=255) gggcaggtcggcatgatggcgatgatgctggcgaa < 1:6381408‑M1/35‑35 (MQ=255) gCCCAGTTCGAGCAGCACATAGTTGGTGACGTcaa > 1:15228100/1‑35 (MQ=255) gCCCAGTTCGAGCAGCACATAGTTGGTGACGTcaa < 1:14485946/35‑1 (MQ=255) gCCCAGTTCGAGCAGCACATAGTTGGTGACGTcaa < 1:13669845/35‑1 (MQ=255) gCCCAGTTCGAGCAGCACATAGTTGGTGACGTcaa > 1:19419703/1‑35 (MQ=255) gCCCAGTTCGAGCAGCACATAGTTGGTGACGTcaa > 1:14764890/1‑35 (MQ=255) gCCCAGTTCGAGCAGCACATAGTTGGTGACGTcaa < 1:14030800/35‑1 (MQ=255) | CAATGCGATCTTTATCGAAAGCGTGCATCGGCTGGCCCAGTTCGAGCAGCACATAGTTGGTGACGTCAA > REL606/1774395‑1774463 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |