New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 9903 | 115 (1.120) | 22 (0.220) | 8/46 | NT | 23.0% | intergenic (+12/+23) | mogA/yaaH | molybdenum cofactor biosynthesis protein/conserved inner membrane protein associated with acetate transport |
? | REL606 | = 1095351 | 37 (0.380) | intergenic (‑185/‑238) | putA/putP | fused DNA‑binding transcriptional regulator/proline dehydrogenase/pyrroline‑5‑carboxylate dehydrogenase/proline:sodium symporter |
CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/9869‑9903 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTGCCGCAGAGAAAAAGTCTGAGTTATTTTTTTAA < REL606/1095351‑1095318 CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC < 1:1083726/35‑1 CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC > 1:3703000/1‑35 CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC > 1:17973559/1‑35 CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC < 1:17505532/35‑1 CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC < 1:12422233/35‑1 CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC < 1:6943112/35‑1 CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC > 1:17121142/1‑35 CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC > 1:1679146/1‑35 CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC < 1:7826596/35‑1 tTAAAAAAACCCCCCCTGCCGCAGAGAAAAAGTCT < 1:9302933/34‑1 aAAAAAAATCCCCCCTGCCGCAGAGAAAAAGTCTG < 1:14224085/34‑1 TAAAAAAATCCCCCCTGCCGCAGAGAAAAAGTCTG < 1:16382893/35‑1 AAAAAACTCCCCCCTGCCGCAGAGAAAAAGTCTGA < 1:12570803/35‑1 AAAAAAATCCCCCCTGCCGCAGAGAAAAAGTCTGA < 1:6960326/35‑1 AAAAAATCCCCCCTGCCGCAGAGAAAAAGTCTGAG < 1:2641651/35‑1 AAAAAACCCCCCCTGCCGCAGAGAAAAAGTCTGAG < 1:9127101/35‑1 AAAAATCCCCCCTGCCGCTGAGAAAAAGTCTGAGT < 1:20266695/35‑1 AAAAATCCCCCCTGCCGCAGAGAAAAAGTCTGAGT < 1:4792748/35‑1 AAAAATCCCCCCTGCCGCAGAGAAAAAGTCTGAGT < 1:14652739/35‑1 AAAAACCCCCCCTGCCGCAGAGAAAAAGTCTGAGT < 1:11651501/35‑1 AAATTCCCCCCTGCCGCAGAGAAAAAGTCTGAGTT < 1:14431954/35‑1 AAAATCCCCCCTGCCGCAGAGAAAAAGTCTGAGTT < 1:16605153/35‑1 AAAATCCCCCCTGCCGCAGAGAAAAAGTCTGAGTT < 1:5287529/35‑1 AAAATCCCCCCTGCCGCAGAGAAAAAGTCTGAGTT < 1:11470188/35‑1 AAAATACCCCCTGCCGCAGAGAAAAAGTCTGAGTT < 1:17191463/35‑1 AAAAGCCCCCCTGCCGCAGAGAAAAAGTCTGAGTT < 1:7447617/35‑1 atcCCCCCCTGCCGCAGAGAAAAAGTCTGAGTTAT < 1:11628459/32‑1 atTCCCCCCTGCCGCAGAGAAAAAGTCTGAGTTAT < 1:3973074/33‑1 aacCCCCCCTGCCGCAGAGAAAAAGTCTGAGTTAT < 1:13107111/32‑1 AATCCCCCCTGCCGCAGAGAAAAAGTCTGAGTTAT < 1:8486402/35‑1 actCCCCCTGCCGCAGAGAAAAAGTCTGAGTTATT < 1:20125180/32‑1 ATCCCCCCTGCCGCAGAGAAAAAGTCTGAGTTATT < 1:15154420/35‑1 tctCCCCTGCCGCAGAGAAAAAGTCTGAGTTATTT < 1:19161684/32‑1 TCCCCCCTGCCGCAGAGAAAAAGTCTGAGTTATTT < 1:18412769/35‑1 TCCCCCCTGCCGCAGAGAAAAAGTCTGAGTTATTT < 1:12473679/35‑1 tCCCCCTGCCGCAGAGAAAAAGTCTGAGTTATTTT < 1:8427068/34‑1 CCCCCCTGCCGCAGAGAAAAAGTCTGAGTTATTTT < 1:9429627/35‑1 CCCCCTGCCGCAGAGAAAAAGTCTGAGTTATTTTT < 1:1926217/35‑1 CCCCCTGCCGCAGAGAAAAAGTCTGAGTTATTTTT < 1:8023717/35‑1 CCCCCTGCCGCAGAGAAAAAGTATGAGTTATTTTT < 1:18171623/35‑1 CCCCTGCCGCAGAGAAAAAGTCTGAGTTATTTTTT < 1:9307513/35‑1 CCCCTGCCGCAGAGAAAAAGTCTGAGTTATTTTTT < 1:14530699/35‑1 CCCCTGCCGCAGAGAAAAAGTCTGAGTTATTTTTT < 1:19761401/35‑1 CCCTGCCGCAGAGAAAAAGTCTGAGTTATTTTTTT < 1:15307348/35‑1 CCCTGCCGCAGAGAAAAAGTCTGAGTTATTTTTTT < 1:17432365/35‑1 CCTGCCGCAGAGAAAAAGTCTGAGTTATTTTTTTA < 1:16782255/35‑1 CCTGCCGCAGAGAAAAAGTCTGAGTTATTTTTTTA < 1:17221644/35‑1 CCTGCCGCAGAGAAAAAGTCTGAGTTATTTTTTTA < 1:879792/35‑1 CTGCTGCAGAGAAAAAGTCTGAGTTATTTTTTTAA < 1:5367464/35‑1 CTGCCGCAGAGAAAAAGTCTGAGTTATTTTTTTAA < 1:16242753/35‑1 CTGCCGCAGAGAAAAAGTCTGAGTTATTTTTTTAA < 1:6708188/35‑1 CTGCCGCAGAGAAAAAGTCTGAGTTATTTTTTTAA > 1:11784478/1‑35 CTGCCGCAGAGAAAAAGTCTGAGTTATTTTTTTAA > 1:9399431/1‑35 CTGCCGAAGAGAAAAAGTCTGAGTTATTTTTTTAA < 1:4935071/35‑1 CAAGACGCGACGTTAGCGAATAAAAAAATCCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/9869‑9903 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTGCCGCAGAGAAAAAGTCTGAGTTATTTTTTTAA < REL606/1095351‑1095318 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |