New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 294203 = | 75 (0.730) | 12 (0.160) | 3/36 | NT | 18.3% | intergenic (+473/‑54) | ykgD/ykgE | predicted DNA‑binding transcriptional regulator/predicted oxidoreductase |
? | REL606 | 836230 = | 51 (0.660) | coding (1876/2226 nt) | ybiO | predicted mechanosensitive channel |
Only 100 of 143 total aligned reads displayed.
TCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTT > REL606/836196‑836264 | cATGGCGATCAACATCATAATTTGCCACCACCGaa > 1:16816376/1‑35 (MQ=255) cATGGCGATCAACATCATAATTTGCCACCACCGaa > 1:7424902/1‑35 (MQ=255) aTGGCGATCAACATCATAATTTGCCACCACCGAAc < 1:10972570/35‑1 (MQ=255) aTGGCGATCAACATCATAATTTGCCACCAACGAAc < 1:12829275/35‑1 (MQ=255) tGGCGATCAACATCATAATTTGCCACCACCGAAcc > 1:1253423/1‑35 (MQ=255) ggCGATCAACATCATAATTTGCCACCACCGAACCa > 1:11389440/1‑35 (MQ=255) ggCGATCAACATCATAATTTGCCACCACCGAACCa > 1:19341390/1‑35 (MQ=255) gCGATCAACATCATAATTTGCCACCACCGAACCaa > 1:580162/1‑35 (MQ=255) gCGATCAACATCATAATTTGCCACCACCGAACCaa > 1:20023969/1‑35 (MQ=255) cGATCAACATCATAATTTGCCACCACCGAACCact > 1:9207/1‑33 (MQ=255) cGATCAACATCATAATTTGCCACCACCGAACCAAt > 1:4839508/1‑35 (MQ=255) cGATCAACATCATAATTTGCCACCACCGAACCAAt > 1:7150943/1‑35 (MQ=255) cGATCAACATCATAATTTGCCACCACCGAACCAAt > 1:7384007/1‑35 (MQ=255) cGATCAACATCATAATTTGCCACCACCGAACCAAt > 1:18703227/1‑35 (MQ=255) cGATCAACATCATAATTTGCCACCACCGAACCAAt > 1:9486385/1‑35 (MQ=255) gATCAACATCATAATTTGCCACCACCGAACCAATg > 1:17677003/1‑35 (MQ=255) gATCAACATCATAATTTGCCACCACCGAACCAATg > 1:14952807/1‑35 (MQ=255) aTCAACATCATAATTTGCCACCACCGAACCAATGc > 1:9756106/1‑35 (MQ=255) tCAACATCATAATTTGCCACCACCGAACCAATGcc > 1:8861223/1‑35 (MQ=255) cAACATCATAATTTGCCACCACCGAACCAATGCcg > 1:6514954/1‑35 (MQ=255) cAACATAATAATTTCCCCCCACCGAACCAATGCcg < 1:629899/35‑1 (MQ=25) aaCATCATAATTTGCCACCACCGAACCAATGCcgc > 1:14556920/1‑35 (MQ=255) aaCATCATAATTTGCCACCACCGAACCAATGCcgc > 1:14713503/1‑35 (MQ=255) aCATCATAATTTGCCACCACCGAACCAATGCcgcg > 1:5667277/1‑35 (MQ=255) aCATCATAATTTGCCACCACCGAACCAATGCcgcg > 1:3021227/1‑35 (MQ=255) aCATCATAATTTGCCACCACCGAACCAATGCcgcg > 1:12583252/1‑35 (MQ=255) aCATCATAATTTGCCACCACCGAACCAATGCcgcg > 1:11908246/1‑35 (MQ=255) aCATCATAATTTGCCACCACCGAACCAATGCcgcg > 1:11883496/1‑35 (MQ=255) aCATCATAATTTGCCACCACCGAACCAATGCcgcg > 1:17368758/1‑35 (MQ=255) catcatAATTTGCCACCACCGAACCAATGCCGCgg > 1:7345562/1‑35 (MQ=255) catcatAATTTGCCACCACCGAACCAATGCCGCgg > 1:7791033/1‑35 (MQ=255) tcatAATTTGCCCCCACCGAACAAATGCCGCGGAc < 1:9312562/35‑1 (MQ=25) atatttcccccccaccgAACCAATGCCGCGGACaa < 1:19425606‑M2/18‑1 (MQ=255) atAATTTGCCACCACCGAACCAATGCCGCGGACaa > 1:16344311/1‑35 (MQ=255) atAATTTGCCACCACCGAACCAATGCCGCGGACaa > 1:10244980/1‑35 (MQ=255) atAATTTCCCCCCACCGAACCAATGCCGCGGACaa < 1:15376468/35‑1 (MQ=37) aaatttcccccccaccgAACCAATGCCGCGGACaa < 1:16101204‑M2/18‑1 (MQ=255) tAATTTGCCACCACCGAACCAATGCCGCGGACaaa > 1:9742136/1‑35 (MQ=255) tAATTTGCCACCACCGAACCAATGCCGCGGACaaa > 1:272710/1‑35 (MQ=255) tAATTTGCCACCACCGAACCAATGCCGCGGACaaa > 1:5660998/1‑35 (MQ=255) tAATTCCCCCCCCCCGAACCAATGCCGCGGACaaa < 1:5465209/35‑1 (MQ=19) tttttccccccaccgAACCAATGCCGCGGACAAAg < 1:14172639‑M2/20‑1 (MQ=255) atttcccccccaccgAACCAATGCCGCGGACAAAg < 1:19058345‑M2/20‑1 (MQ=255) aaTTTGCCACCACCGAACCAATGCCGCGGACAAAg > 1:9442225/1‑35 (MQ=255) aaTTTCCCCCCACCGAACCAATGCCGCGGACAAAg < 1:12322838/35‑1 (MQ=37) tttgccccccaccgAACCAATGCCGCGGACAAAGt < 1:2408103‑M2/21‑1 (MQ=255) tttcccccccaccgAACCAATGCCGCGGACAAAGt < 1:9161145‑M2/21‑1 (MQ=255) aTTTGCCCCCACCGAACCAATGCCGCGGACAAAGt < 1:346321/35‑1 (MQ=255) tttGCCACCACCGAACCAATGCCGCGGACAAAGtt > 1:14581580/1‑35 (MQ=255) ttccccccaccgAACCAATGCCGCGGACAAAGTTa < 1:8068942‑M2/23‑1 (MQ=255) ttGCCACCACCGAACCAATGCCGCGGACAAAGTTa > 1:3505408/1‑35 (MQ=255) ttGCCACCACCGAACCAATGCCGCGGACAAAGTTa > 1:5371736/1‑35 (MQ=255) gCCACCACCGAACCAATGCCGCGGACAAAGTTAGc > 1:19045408/1‑35 (MQ=255) cccccaccgAACCAATGCCGCGGACAAAGTTAGCa < 1:1149800‑M2/26‑1 (MQ=255) cccccaccgAACCAATGCCGCGGACAAAGTTAGCa < 1:844556‑M2/26‑1 (MQ=255) cccccaccgAACCAATGCCGCGGACAAAGTTAGCa < 1:6902590‑M2/26‑1 (MQ=255) ccaccaCCGAACCAATGCCGCGGACAAAGTTAGCa > 1:18588160/1‑35 (MQ=255) caccacCGAACCAATGCCGCGGACAAAGTTAGCaa > 1:4151369/1‑35 (MQ=255) cccaccgAACCAATGCCGCGGACAAAGTTAGCaaa < 1:13817666‑M2/28‑1 (MQ=255) cccaccgAACCAATGCCGCGGACAAAGTTAGCaaa < 1:3542413‑M2/28‑1 (MQ=255) cccaccgAACCAATGCCGCGGACAAAGTTAGCaaa < 1:2719871‑M2/28‑1 (MQ=255) cccaccgAACCAATGCCGCGGACAAAGTTAGCaaa < 1:13514938‑M2/28‑1 (MQ=255) cccaccgAACCAATGCCGCGGACAAAGTTAGCaaa < 1:17265318‑M2/28‑1 (MQ=255) accaccGAACCAATGCCGCGGACAAAGTTAGCaaa > 1:8069433/1‑35 (MQ=255) accacaGAACCAATGCCGCGGACAAAGTTAGCaaa < 1:4375073/35‑1 (MQ=255) accacaGAACCAATGCCGCGGACAAAGTTAGCaaa < 1:12477001/35‑1 (MQ=255) ccaccgAACCAATGCCGCGGACAAAGTTAGCAAAg < 1:1097208‑M2/29‑1 (MQ=255) ccaccgAACCAATGCCGCGGACAAAGTTAGCAAAg < 1:16255440‑M2/29‑1 (MQ=255) ccaccgAACCAATGCCGCGGACAAAGTTAGCAAAg > 1:2491644‑M2/7‑35 (MQ=255) ccaccgAACCAATGCCGCGGACAAAGTTAGCAAAg < 1:15614093‑M2/29‑1 (MQ=255) ccaccgAACCAATGCCGCGGACAAAGTTAGCAAAg < 1:9129269‑M2/29‑1 (MQ=255) ccaccgAACCAATGCCGCGGACAAAGTTAGCAAAg > 1:13491285‑M2/7‑35 (MQ=255) caccgAACCAATGCCGCGGACAAAGTTAGCAAAgg > 1:15689662‑M2/6‑35 (MQ=255) caccgAACCAATGCCGCGGACAAAGTTAGCAAAgg > 1:20113808‑M2/6‑35 (MQ=255) caccgAACCAATGCCGCGGACAAAGTTAGCAAAgg > 1:11707909‑M2/6‑35 (MQ=255) caccgAACCAATGCCGCGGACAAAGTTAGCAAAgg < 1:8603849‑M2/30‑1 (MQ=255) accgAACCAATGCCGCGGACAAAGTTAGCAAAggt < 1:11247831‑M2/31‑1 (MQ=255) accgAACCAATGCCGCGGACAAAGTTAGCAAAggt < 1:16334344‑M2/31‑1 (MQ=255) accgAACCAATGCCGCGGACAAAGTTAGCAAAggt > 1:16588386‑M2/5‑35 (MQ=255) accgAACCAATGCCGCGGACAAAGTTAGCAAAggt > 1:12163694‑M2/5‑35 (MQ=255) accgAACCAATGCCGCGGACAAAGTTAGCAAAggt > 1:17985398‑M2/5‑35 (MQ=255) ccgAACCAATGCCGCGGACAAAGTTAGCAAAggtg > 1:2903152‑M2/4‑35 (MQ=255) ccgAACCAATGCCGCGGACAAAGTTAGCAAAggtg > 1:14176664‑M2/4‑35 (MQ=255) ccgAACCAATGCCGCGGACAAAGTTAGCAAAggtg > 1:5363517‑M2/4‑35 (MQ=255) ccgAACCAATGCCGCGGACAAAGTTAGCAAAggtg > 1:7679221‑M2/4‑35 (MQ=255) cgAACCAATGCCGCGGACAAAGTTAGCAAAggtgg < 1:2691723‑M2/33‑1 (MQ=255) cgAACCAATGCCGCGGACAAAGTTAGCAAAggtgg < 1:6028298‑M2/33‑1 (MQ=255) cgAACCAATGCCGCGGACAAAGTTAGCAAAggtgg < 1:13323533‑M2/33‑1 (MQ=255) cgAACCAATGCCGCGGACAAAGTTAGCAAAggtgg < 1:6511292‑M2/33‑1 (MQ=255) cgAACCAATGCCGCGGACAAAGTTAGCAAAggtgg > 1:12731800‑M2/3‑35 (MQ=255) cgAACCAATGCCGCGGACAAAGTTAGCAAAggtgg < 1:12864899‑M2/33‑1 (MQ=255) gAACCAATGCCGCGGACAAAGTTAGCAAaggtggg > 1:16055946‑M2/2‑34 (MQ=255) gAACCAATGCCGCGGACAAAGTTAGCAAAggtggt > 1:17092772‑M2/2‑35 (MQ=255) gAACCAATGCCGCGGACAAAGTTAGCAAAggtggt < 1:13149231‑M2/34‑1 (MQ=255) gAACCAATGCCGCGGACAAAGTTAGCAAAggtggt < 1:13875058‑M2/34‑1 (MQ=255) gAACCAATGCCGCGGACAAAGTTAGCAAAggtggt > 1:14797231‑M2/2‑35 (MQ=255) aaCCAATGCCGCGGACAAAGTTAGCAAAggtgggt > 1:15486468/1‑33 (MQ=255) aaCCAATGCCGCGGACAAAGTTAGCAAATGTGGtt > 1:4889478/1‑35 (MQ=255) aaCCAATGCCGCGGACAAAGTTAGCAAAGGTGGtt < 1:19560872/35‑1 (MQ=255) aaCCAATGCCGCGGACAAAGTTAGCAAAGGTGGtt < 1:13661015/35‑1 (MQ=255) | TCATGGCGATCAACATCATAATTTGCCACCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTT > REL606/836196‑836264 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |