Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 546,191 | IS1 (+) +9 bp | 100% | coding (346‑354/384 nt) | ybcQ → | predicted antitermination protein |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 546191 = | 0 (0.000) | 77 (0.780) | 35/46 | NT | 100% | coding (346/384 nt) | ybcQ | predicted antitermination protein |
? | REL606 | 546932 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
* | ? | REL606 | = 546199 | 0 (0.000) | 125 (1.220) | 42/48 | NT | 100% | coding (354/384 nt) | ybcQ | predicted antitermination protein |
? | REL606 | = 547699 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region |
Only 100 of 318 total aligned reads displayed.
CATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAA > REL606/546157‑546225 | cataaagcactatcaataagttggagtcattaccc > 1:4825968‑M1/35‑35 (MQ=255) cataaaacactatcaataagttggattcattaccc < 1:18059994‑M1/1‑1 (MQ=255) cataaaacactatcaataagttggagtcattaccc < 1:13155318‑M1/1‑1 (MQ=255) cataaaacactatcaataagttggagtcattaccc > 1:12971504‑M1/35‑35 (MQ=255) cataaaacactatcaataagttggagtcattaccc < 1:1943077‑M1/1‑1 (MQ=255) cataaaacactatcaataagttggagtcattaccc < 1:6047906‑M1/1‑1 (MQ=255) cataaaacactatcaataagttggagtcattaccc > 1:17241158‑M1/35‑35 (MQ=255) cataaaacactatcaataagttggagtcattaccc < 1:11792484‑M1/1‑1 (MQ=255) cataaaacactatcaataagttggagtcattaccc > 1:2315682‑M1/35‑35 (MQ=255) cataaaacactatcaataagttggagtcattaccc > 1:4393588‑M1/35‑35 (MQ=255) cataaaacactatcaataagttggagtcattaccc < 1:20419602‑M1/1‑1 (MQ=255) cataaaacactatcaataagttggagtcattaccc < 1:20112014‑M1/1‑1 (MQ=255) cataaaacactatcaataagttggagtcattaccc < 1:10056404‑M1/1‑1 (MQ=255) cataaaacactatcaataagttggagtcattaccc > 1:20242203‑M1/35‑35 (MQ=255) ataaaacactatcaataagttggagtcattaccCg > 1:13862281‑M1/34‑35 (MQ=255) taaaacactatcaataagttggagtcattaccCgg > 1:7823345‑M1/33‑35 (MQ=255) tAATTGAAGGGATGTTAATGGCATTAGATATCCgg > 1:3235015/1‑35 (MQ=255) aaaacactatcaataagttggagtcattaccCGGt > 1:14201348‑M1/32‑35 (MQ=255) aaacactatcaataagttggagtcattaccCGGtt > 1:13519835‑M1/31‑35 (MQ=255) aTTGAAGGGATGTTAATGGCATTAGATATCCGGtt > 1:14787482/1‑35 (MQ=255) aTTGAAGGGATGTTAATGGCATTAGATATCCGGtt < 1:11992993/35‑1 (MQ=255) aTTGAAGGGATGTTAATGGCATTAGATATCCGGtt < 1:4264496/35‑1 (MQ=255) aTTGAAGGGATGTTAATGGAATTAGATATCCGGtt < 1:17070011/35‑1 (MQ=255) aacactatcaataagttggagtcattaccCGGTTa > 1:17659706‑M1/30‑35 (MQ=255) aacactatcaataagttggagtcattaccCGGTTa > 1:5781762‑M1/30‑35 (MQ=255) acactatcaataagttggagtcattaccCGGTTag < 1:8781496‑M1/7‑1 (MQ=255) gAAGGGATGTTAATGGCATTAGATATCCGGTTaga > 1:17449182/1‑35 (MQ=255) cactatcaataagttggagtcattaccCGGTTaga > 1:15867910‑M1/28‑35 (MQ=255) nctatcaataagttggagtcattaccCGGTTagag < 1:15070322‑M1/9‑1 (MQ=255) actatcaataagttggagtcattaccCGGTTagag > 1:10923229‑M1/27‑35 (MQ=255) aaGGGATGTTAATGGCATTAGATATCCGGTTagag > 1:2986931/1‑35 (MQ=255) aaGGGATGTTAATGGCATTAGATATCCGGTTagag < 1:20609277/35‑1 (MQ=255) aGGGATGTTAATGGCATTAGATATCCGGTTAGAGg > 1:2818694‑M1/1‑34 (MQ=255) aGGGATGTTAATGGCATTAGATATCCGGTTAGAGg < 1:19500190‑M1/35‑2 (MQ=255) aGGGATGTTAATGGCATTAGATATCCGGTTAGAGg > 1:9813676‑M1/1‑34 (MQ=255) aGGGATGTTAATGGCATTAGATATCCGGTTAGAGg < 1:16390059‑M1/35‑2 (MQ=255) tatcaataagttggagtcattaccCGGTTAGAGAt > 1:2340821‑M1/25‑35 (MQ=255) tatcaataagttggagtcattaccCGGTTAGAGAt > 1:812012‑M1/25‑35 (MQ=255) gggATGTTAATGTCATTAGATATCCGGTTAGAGgg > 1:18691228‑M1/1‑33 (MQ=255) ggATGTTAATGGCATTAGATATCCGGTTAGAGggt < 1:2659742‑M1/35‑4 (MQ=255) atcaataagttggagtcattaccCGGTTAGAGATg > 1:1366200‑M1/24‑35 (MQ=255) gATGTTAATGGCATTAGATATCCGGTTAGAGggtg < 1:10861903‑M1/35‑5 (MQ=255) gATGTTAATGGCATTAGATATCCGGTTAGAGggtg > 1:7253375‑M1/1‑31 (MQ=255) caataagttggagtcattaccCGGTTAGAGATGGa > 1:16824568‑M1/22‑35 (MQ=255) aTGTTAATGGCATTAGATATCCGGTTAGAGggtga > 1:8210915‑M1/1‑30 (MQ=255) gTTAATGGCATTAGATATCCGGTTAGAGggtgatg > 1:9137402‑M1/1‑28 (MQ=255) gTTAATGGCATTAGATATCCGGTTAGAGggtgatg > 1:17823488‑M1/1‑28 (MQ=255) ttAATGGCATTAGATATCCGGTTAGAGggtgatgc > 1:8865926‑M1/1‑27 (MQ=255) ttAATGGCATTAGATATCCGGTTAGAGggtgatgc > 1:16895485‑M1/1‑27 (MQ=255) ttAATGGCATTAGATATCCGGTTAGAGggtgatgc < 1:14082116‑M1/35‑9 (MQ=255) taagttggagtcattaccCGGTTAGAGATGGatat < 1:12598689‑M1/17‑1 (MQ=255) taagttggagtcattaccCGGTTAGAGATGGatat < 1:718105‑M1/17‑1 (MQ=255) taagttggagtcattaccCGGTTAGAGATGGatat > 1:5645197‑M1/19‑35 (MQ=255) taagttggagtcattaccCGGTTAGAGATGGatat > 1:11397371‑M1/19‑35 (MQ=255) tAATGGCATTAGATATCCGGTTAGAGggtgatgct > 1:3447166‑M1/1‑26 (MQ=255) tAATGGCATTAGATATCCGGTTAGAGggtgatgct > 1:15347100‑M1/1‑26 (MQ=255) tAATGGCATTAGATATCCGGTTAGAGggtgatgct > 1:16951131‑M1/1‑26 (MQ=255) aagttggagtcattaccCGGTTAGAGATGGATATc < 1:8661841‑M1/18‑1 (MQ=255) aagttggagtcattaccCGGTTAGAGATGGATATc < 1:19277568‑M1/18‑1 (MQ=255) aagttggagtcattaccCGGTTAGAGATGGATATc > 1:18964149‑M1/18‑35 (MQ=255) agttggagtcattaccCGGTTAGAGATGGATATCg > 1:16099180‑M1/17‑35 (MQ=255) aaTGGCATTAGATATCCGGTTAGAGggtgatgctg > 1:9359063‑M1/1‑25 (MQ=255) gttggagtcattaccCGGTTAGAGATGGATATCgt > 1:657186‑M1/16‑35 (MQ=255) aTGGCATTAGATATCCGGTTAGAGggtgatgctgc < 1:14464090‑M1/35‑12 (MQ=255) aTGGCATTAGATATCCGGTTAGAGggtgatgctgc < 1:7550376‑M1/35‑12 (MQ=255) ttggagtcattaccCGGTTAGAGATGGATATCgtt > 1:14739441‑M1/15‑35 (MQ=255) ttggagtcattaccCGGTTAGAGATGGATATCgtt > 1:16145761‑M1/15‑35 (MQ=255) tGGCATTAGATATCCGGTTAGAGggtgatgctgcc < 1:16594383‑M1/35‑13 (MQ=255) tggagtcattaccCGGTTAGAGATGGATATCgttg > 1:8367476‑M1/14‑35 (MQ=255) tggagtcattaccCGGTTAGAGATGGATATCgttg > 1:19756346‑M1/14‑35 (MQ=255) tggagtcattaccCGGTTAGAGATGGATATCgttg < 1:19813119‑M1/22‑1 (MQ=255) gCATTAGATATCCGGTTAGAGggtgatgctgccaa < 1:13290230‑M1/35‑15 (MQ=255) aTTAGATATCCGGTTAGAGggtgatgctgccaact < 1:634518‑M1/35‑17 (MQ=255) ttAGATATCCGGTTAGAGggtgatgctgccaactt < 1:3943545‑M1/35‑18 (MQ=255) ttAGATATCCGGTTAGAGggtgatgctgccaactt < 1:4592960‑M1/35‑18 (MQ=255) tcattaccCGGTTAGAGATGGATATCGTTGTtaat > 1:7057684‑M1/9‑35 (MQ=255) tAGATATCCGGTTAGAGggtgatgctgccaactta < 1:5372766‑M1/35‑19 (MQ=255) aGATATCCGGTTAGAGggtgatgctgccaacttac < 1:14027416‑M1/35‑20 (MQ=255) aGATATCCGGTTAGAGggtgatgctgccaacttac > 1:10028640‑M1/1‑16 (MQ=255) aGATATCCGGTTAGAGggtgatgctgccaacttac > 1:5264795‑M1/1‑16 (MQ=255) gATATCCGGTTAGAGggtgatgctgccaacttact > 1:9645306‑M1/1‑15 (MQ=255) gATATCCGGTTAGAGggtgatgctgccaacttact < 1:18739272‑M1/35‑21 (MQ=255) atatCCGGTTAGAGtgtgatgctgccaacttactg > 1:9477142‑M1/1‑14 (MQ=255) tatCCGGTTAGAGggtgatgctgcccacttactga < 1:10256773‑M1/35‑23 (MQ=255) tatCCGGTTAGAGggtgatgctgccaacttactga < 1:14620458‑M1/35‑23 (MQ=255) tatCCGGTTAGAGggtgatgctgccaacttactga < 1:4155960‑M1/35‑23 (MQ=255) tatCCGGTTAGAGggtgatgctgccaacttactga < 1:3189113‑M1/35‑23 (MQ=255) tatCCGGTTAGAGggtgatgctgccaacttactga < 1:18361601‑M1/35‑23 (MQ=255) tatCAGGTTAGAGggtgatgctgccaacttactga < 1:7463799‑M1/35‑23 (MQ=255) taccCGGTTAGAGATGGATATCGTTGTTAATAAct > 1:3717577‑M1/5‑35 (MQ=255) ctcCGGTTAGAGggtgatgctgccaacttactgat < 1:15544257‑M1/34‑24 (MQ=255) tCCGGTTAGAGggtgatgctgccaacttactgatt < 1:10716841‑M1/35‑25 (MQ=255) tCCGGTTAGAGggtgatgctgccaacttactgatt < 1:12763864‑M1/35‑25 (MQ=255) ccGGTTAGAGggtgatgctgccaacttactgattt > 1:1582231‑M1/1‑10 (MQ=255) cGGTTAGAGggtgatgctgccaacttactgattta > 1:12244170‑M1/1‑9 (MQ=255) cGGTTAGAGggtgatgctgccaacttactgattta < 1:4509084‑M1/35‑27 (MQ=255) cGGTTAGAGggtgatgctgccaacttactgattta > 1:19944545‑M1/1‑9 (MQ=255) cGGTTAGAGATGGATATCGTTGTTAATAACTCtaa < 1:12074632/35‑1 (MQ=255) cGGTTAGAGATGGATATCGTTGTTAATAACTCtaa < 1:12478336/35‑1 (MQ=255) cGGTTAGAGATGGATATCGTTGTTAATAACTCtaa > 1:17789662/1‑35 (MQ=255) | CATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAA > REL606/546157‑546225 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |