New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3006451 = | 87 (0.850) | 9 (0.100) | 4/44 | NT | 11.8% | coding (461/819 nt) | yafZ | conserved protein |
? | REL606 | 4115747 = | 55 (0.580) | coding (1806/2181 nt) | katG | catalase/hydroperoxidase HPI(I) |
Only 100 of 111 total aligned reads displayed.
CCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGG > REL606/4115713‑4115781 | ccGAGTCGCTGCTGATCGACAAAGCACAGCAACTg < 1:392139/35‑1 (MQ=255) ccGAGTCCCTGCTGATCGACAAAGCCCAGCAACTg < 1:6362630/35‑1 (MQ=37) ccGAGTCACTGCTGATCGACAAAGCACAGCAACTg > 1:19295239/1‑35 (MQ=255) cGAGTCACTGCTGATCGACAAAGCACAGCAACTGa > 1:5386025/1‑35 (MQ=255) cGAGTCACTGCTGATCGACAAAGCACAGCAACTGa > 1:8956830/1‑35 (MQ=255) gAGTCACTGCTGATCGACAAAGCACAGCAACTGAc > 1:15173886/1‑35 (MQ=255) gAGTCACTGCTGATCGACAAAGCACAGCAACTGAc > 1:12893756/1‑35 (MQ=255) gAGTCACTGCTGATCGACAAAGCACAGCAACTGAc > 1:8657307/1‑35 (MQ=255) aGTCACTGCTGATCGACAAAGCACAGCAACTGACg > 1:405486/1‑35 (MQ=255) gTCACTGCTGATCGACAAAGCACAGCAACTGACGc > 1:12300659/1‑35 (MQ=255) gTCACTGCTGATCGACAAAGCACAGCAACTGACGc > 1:5210884/1‑35 (MQ=255) tCACTGCTGATCGACAAAGCACAGCAACTGACGCt > 1:2018511/1‑35 (MQ=255) tCACTGCTGATCGACAAAGCACAGCAACTGACGCt > 1:17215965/1‑35 (MQ=255) tCACTGCTGATCGACAAAGCACAGCAACTGACGCt > 1:19395079/1‑35 (MQ=255) aCTGCTGATCGACAAAGCACAGCAACTGACGCTGa > 1:18297117/1‑35 (MQ=255) aCTGCTGATCGACAAAGCACAGCAACTGACGCTGa > 1:10806971/1‑35 (MQ=255) aCTGCTGATCGACAAAGCACAGCAACTGACGCTGa > 1:16729344/1‑35 (MQ=255) ctgctgATCGACAAAGCACAGCAACTGACGCTGag > 1:16458944/1‑34 (MQ=255) ctgctgATCGACAAAGCACAGCAACTGACGCTGAc > 1:12585197/1‑35 (MQ=255) ctgctgATCGACAAAGCACAGCAACTGACGCTGAc > 1:11091307/1‑35 (MQ=255) ctgctgATCGACAAAGCACAGCAACTGACGCTGAc > 1:16242981/1‑35 (MQ=255) tgctgATCGACAAAGCACAGCAACTGACGCTTAcc > 1:19685399/1‑35 (MQ=255) tgctgATCGACAAAGCACAGCAACTGACGCTGAct > 1:17358364/1‑34 (MQ=255) gctgATCGACAAAGCACAGCAACTGACGCTGACcg > 1:10470439/1‑35 (MQ=255) gctgATCGACAAAGCACAGCAACTGACGCTGACcg > 1:14774366/1‑35 (MQ=255) gctgATCGACAAAGCACAGCAACTGACGCTGACcg > 1:1147214/1‑35 (MQ=255) ctgATCGACAAAGCACAGCAACTGACGCTGACcgc > 1:16482348/1‑35 (MQ=255) ctgATCGACAAAGCACAGCAACTGACGCTGACcgc > 1:1715268/1‑35 (MQ=255) ctgATCGACAAAGCACAGCAACTGACGCTGACcgc > 1:19298362/1‑35 (MQ=255) tgATCGACAAAGCACAGCAACTGACGCTGACcgcg > 1:5821500/1‑35 (MQ=255) tgATCGACAAAGCACAGCAACTGACGCTGACcgcg > 1:14634967/1‑35 (MQ=255) tgATCGACAAAGCACAGCAACTGACGCTGACcgcg > 1:307625/1‑35 (MQ=255) gATCGACAAAGCACAGCAACTGACGCTGACCgcgc > 1:16293648/1‑35 (MQ=255) gATCGACAAAGCACAGCAACTGACGCTGACCgcgc > 1:20155854/1‑35 (MQ=255) aTCGACAAAGCACAGCAACTGACGCTGACCGCGcc > 1:1812088/1‑35 (MQ=255) aTCGACAAAGCACAGCAACTGACGCTGACCGCGcc > 1:3823339/1‑35 (MQ=255) tCGACAAAGCACAGCAACTGACGCTGACCGCGCCg > 1:5239795/1‑35 (MQ=255) tCGACAAAGCACAGCAACTGACGCTGACCGCGCCg > 1:7530607/1‑35 (MQ=255) tCGACAAAGCACAGCAACTGACGCTGACCGCGCCg > 1:18860003/1‑35 (MQ=255) cGACAAAGCACAGCAACTTACGCTGACCGCGCCgg > 1:18027845/1‑35 (MQ=255) cGACAAAGCACAGCAACTGACGCTGACCGCGCCgg > 1:9203126/1‑35 (MQ=255) cGACAAAGCACAGCAACTGACGCTGACCGCGCCgg > 1:16601262/1‑35 (MQ=255) cGACAAAGCACAGCAACTGACGCTGACCGCGCCgg > 1:12704801/1‑35 (MQ=255) aCAAAGCACAGCAACTGACGCTGACCGCGCCGGaa > 1:2915085/1‑35 (MQ=255) cAAAGCACAGCAACTGACGCTGACCGCGCCGGaaa > 1:7718233/1‑35 (MQ=255) cAAAGCACAGCAACTGACGCTGACCGCGCCGGaaa > 1:6688063/1‑35 (MQ=255) aaacccccaccacctGACGCTGACCGCGCCGGaaa < 1:11358228‑M2/20‑1 (MQ=255) aaacccccaccacctGACGCTGACCGCGCCGGaaa < 1:2578947‑M2/20‑1 (MQ=255) aacccccaccacctGACGCTGACCGCGCAGGAAAt < 1:482906‑M2/21‑1 (MQ=255) aaaGCACAGCAACTGACGCTGACCGCGCCGGAAAt > 1:852081/1‑35 (MQ=255) acccccaccccctGACGCTGACCGCGCCGGAAATg < 1:17304241‑M2/22‑1 (MQ=255) aaGCACAGCAACTGACGCTGACCGCGCCGGAAATg > 1:11373436/1‑35 (MQ=255) aGCACAGCAACTGACGCTGACCGCGCCGGAAATGa > 1:15357483/1‑35 (MQ=255) gCACAGCAACTGACGCTGACCGCGCCGGAAATGAc > 1:106834/1‑35 (MQ=255) gCACAGCAACTGACGCTGACCGCGCCGGAAATGAc > 1:191268/1‑35 (MQ=255) cacaGCAACTGACGCTGACCGCGCCGGAAATGACt > 1:17422070/1‑35 (MQ=255) cacaGCAACTGACGCTGACCGCGCCGGAAATGACt > 1:2932268/1‑35 (MQ=255) cacaGCAACTGACGCTGACCGCGCCGGAAATGACt > 1:8565593/1‑35 (MQ=255) ccaccacctGACGCTGACCGCGCCGGAAATGACTg < 1:7306515‑M2/26‑1 (MQ=255) ccaccacctGACGCTGACCGCGCCGGAAATGACTg < 1:2521851‑M2/26‑1 (MQ=255) caaccacctGACGCTGACCGCGCCGGAAATGACTg < 1:17535526‑M2/26‑1 (MQ=255) acaccacctGACGCTGACCGCGCCGGAAATGACTg < 1:9018580‑M2/26‑1 (MQ=255) acaGCAACTGACGCTGACCGCGCCGGAAATGACTg > 1:4839615/1‑35 (MQ=255) acaGCAACTGACGCTGACCGCGCCGGAAATGACTg > 1:13179119/1‑35 (MQ=255) acaGCAACTGACGCTGACCGCGCCGGAAATGACTg > 1:7208407/1‑35 (MQ=255) acaGCAACTGACGCTAACCGCGCCGGAAATGACTg > 1:15280076/1‑35 (MQ=255) caGCAACTGACGCTGACCGCGCCGGAAATTACTgc > 1:13260269/1‑35 (MQ=255) caGCAACTGACGCTGACCGCGCCGGAAATGACTgc > 1:17796054/1‑35 (MQ=255) gCAACTGACGCTGACCGCGCCGGAAATGACTgcgc > 1:11258674/1‑35 (MQ=255) cccctGACGCTGACCGCGCCGGAAATGACTGCGCt < 1:10425245‑M2/30‑1 (MQ=255) ccccTGACGATGACCGCGCCGGAAATGACTGCGCt < 1:8060771/32‑1 (MQ=25) cacctGACGCTGACCGCGCCGGAAATGACTGCGCt < 1:9598456‑M2/30‑1 (MQ=255) cacctGACGCTGACCGCGCCGGAAATGACTGCGCt < 1:8940918‑M2/30‑1 (MQ=255) cAACTGACGCTGACCGCGCCGGAAATGACTGCGCt > 1:17061617/1‑35 (MQ=255) ccctGACGCTGCCCGCGCCGGAAATGACTGCGCtg < 1:13207224‑M2/31‑1 (MQ=255) ccctGACGCTGCCCGCGCCGGAAATGACTGCGCtg < 1:14739271‑M2/31‑1 (MQ=255) acctGACGCTGACCGCGCCGGAAATGACTGCGCtg < 1:7888284‑M2/31‑1 (MQ=255) acctGACGCTGACCGCGCCGGAAATGACTGCGCtg < 1:15020124‑M2/31‑1 (MQ=255) aaCTGACGCTGACCGCGCCGGAAATGACTGCGCtg > 1:2382149/1‑35 (MQ=255) aaCTGACGCTGACCGCGCCGGAAATGACTGCGCtg > 1:12843958/1‑35 (MQ=255) aaCTGACGCTGACCGCGCCGGAAATGACTGCGCtg > 1:16046135/1‑35 (MQ=255) cctGACGCTGACCGCGCCGGAAATGACTGCGCtgg < 1:6144945‑M2/32‑1 (MQ=255) ccTGCCGCGGGCCGCGCCGGAAATGACTGCGCtgg < 1:17073224/34‑1 (MQ=21) aCTGACTCTGACCGCGCCGGAAATGACTGCGCtgg > 1:12072753/1‑35 (MQ=255) aCTGACGCTGACCGCGCCGGAAATGACTGCGCtgg > 1:9218787/1‑35 (MQ=255) aCTGACGCTGACCGCGCCGGAAATGACTGCGCtgg > 1:7461170/1‑35 (MQ=255) aCTGACGCTGACCGCGCCGGAAATGACTGCGCtgg > 1:15247877/1‑35 (MQ=255) aCTGACGCTGACCGCGCCGGAAATGACTGCGCtgg > 1:3408004/1‑35 (MQ=255) ctGACGCTGACCGCGCCGGAAATGACTGCGCtggt > 1:78794‑M2/3‑35 (MQ=255) ctGACGCTGACCGCGCCGGAAATGACTGCGCtggt < 1:18933139‑M2/33‑1 (MQ=255) ctGACGCTGACCGCGCCGGAAATGACTGCGCtggt > 1:18971399‑M2/3‑35 (MQ=255) ctGACGCTGACCGCGCCGGAAATGACTGCGCtggt < 1:20101299‑M2/33‑1 (MQ=255) ctGACGCTGACCGCGCCGGAAATGACTGCGCtggt < 1:12507966‑M2/33‑1 (MQ=255) ctGACGCTGACCGCGCCGGAAATGACTGCGCtggt > 1:2915549‑M2/3‑35 (MQ=255) tGACGCTGACCGCGCCGGAAATGACTGCGCtggtg < 1:14838829‑M2/34‑1 (MQ=255) tGACGCTGACCGCGCCGGAAATGACTGCGCtggtg < 1:8134000‑M2/34‑1 (MQ=255) tGACGCTGACCGCGCCGGAAATGACTGCGCtggtg > 1:20473329‑M2/2‑35 (MQ=255) tGACGCTGACCGCGCCGGAAATGACTGCGCtggtg > 1:2265940‑M2/2‑35 (MQ=255) tGACGCTGACCGCGCCGGAAATGACTGCACtggtg > 1:3714628‑M2/2‑35 (MQ=255) gACGCTGACCGCGCCGGAAATGACTGCGCtggtgg < 1:2606374/35‑1 (MQ=255) | CCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGG > REL606/4115713‑4115781 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |