Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,268,052 | IS150 (+) +3 bp | 55.8% | intergenic (‑83/+42) | yhbE ← / ← rpmA | conserved inner membrane protein/50S ribosomal protein L27 |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2775877 | NA (NA) | 38 (0.370) | 25/48 | NT | 49.4% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | = 3268054 | 34 (0.380) | intergenic (‑85/+42) | yhbE/rpmA | conserved inner membrane protein/50S ribosomal protein L27 | |||||
* | ? | REL606 | 3268052 = | 34 (0.380) | 48 (0.470) | 29/48 | NT | 55.3% | intergenic (‑83/+44) | yhbE/rpmA | conserved inner membrane protein/50S ribosomal protein L27 |
? | REL606 | = 3652533 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
TCCCGGTAACGGATGAAAGCCCCGCAACACGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3268085‑3268052 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTA < REL606/3652533‑3652505 TCCCGGTAACGGATGAAAGCCCCGCAACACGTTGT < 1:613789/35‑1 TCCCGGTAACGGATGAAAGCCCCGCAACACGTTGT > 1:20553488/1‑35 CCCGGTAACGGATGAAAGCCCCGCAACACGTTGTG > 1:10655271/1‑35 CCCGGTAACGGATGAAAGCCCCGCAACACGTTGTG < 1:5699747/35‑1 CCGGTAACGGATGAAAGCCCCGCAACACGTTGTGT < 1:3563329/35‑1 CCGGTAACGGATGAAAGCCCCGCAACACGTTGTGT > 1:16680862/1‑35 CCGGTAACGGATGAAAGCCACGCAACACGTTGTGT < 1:15620283/35‑1 GGTAACGGATGAAAGCCCCGCAACACGTTGTGTAC < 1:18346802/35‑1 GGTAACGGATGAAAGCCCCGCAACACGTTGTGTAC > 1:3772107/1‑35 GTAACGGATGAAAGCCCCGCAACACGTTGTGTACT > 1:4430188/1‑35 GTAACGGATGAAAGCCCCGCAACACGTTGTGTACT < 1:11078133/35‑1 TAACGGATGAAAGCCCCGCAACACGTTGTGTACTG > 1:18675649/1‑35 AACGGATGAAAGCCCCGCAACACGTTGTGTACTGA > 1:2695101/1‑35 AACGGATGAAAGCCCCGCAACACGTTGTGTACTGA < 1:5842088/35‑1 AACGGATGAAAGCCCCGCAACACGTTGTGTACTGA > 1:5780424/1‑35 ACGGATGAAAGCCCCGCAACACGTTGTGTACTGAC > 1:14346457/1‑35 cgtATGAAAGCCCCGCAACACGTTGTGTACTGACC > 1:3351831/4‑35 CGGATGAAAGCCCCGCAACACGTTGTGTACTGACC > 1:6201692/1‑35 tGATGAAAGCCCCGCAACACGTTGTGTACTGACCC > 1:4807978/2‑35 GGATGAAAGCCCCGCAACACGTTGTGTACTGACCC < 1:14179613/35‑1 agTGAAAGCCCCGCAACACGTTGTGTACTGACCCC < 1:3295140/33‑1 GATGAAAGCCCCGCAACACGTTGTGTACTGACCCC < 1:6118626/35‑1 GATGAAAGCCCCGCAACACGTTGTGTACTGACCCC < 1:6545206/35‑1 GATGAAAGCCCCGCAACACGTTGTGTACTGACCCC < 1:8560742/35‑1 ATGAGAGCCCCGCAACACGTTGTGTACTGACCCCA > 1:17187862/1‑35 ATGAAAGCCCGGCAACACGTTGTGTACTGACCCCA < 1:1299321/35‑1 TGAAAGCCCCGCAACACGTTGTGTACTGACCCCAA < 1:290714/35‑1 GAAAGCCCCGCAACACGTTGTGTACTGACCCCAAA < 1:13854953/35‑1 AAGCCCCGCAACACGTTGTGTACTGACCCCAAAAA > 1:4288141/1‑35 AAGCCCCGCAACACGTTGTGTACTGACCCCAAAAA > 1:17399195/1‑35 AAGCCCCGCAACACGTTGTGTACTGACCCCAAAAA < 1:676737/35‑1 GCCCCGCAACACGTTGTGTACTGACCCCAAAAAGT < 1:9488957/35‑1 CCCCGCAACACGTTGTGTACTGACCCCAAAAAGTT > 1:19921337/1‑35 CCCCGCAACACGTTGTGTACTGACCCCAAAAAGTT > 1:7653166/1‑35 CCCCGCAACACGTTGTGTACTGACCCCAAAAAGTT > 1:11024705/1‑35 CCCCGCAACACGTTGTGTACTGACCCCAAAAAGTT > 1:18347758/1‑35 CCCGCAACACGTTGTGTACTGACCCCAAAAAGTTG > 1:8959860/1‑35 CCCGCAACACGTTGTGTACTGACCCCAAAAAGTTG > 1:17598118/1‑35 CCGCAACACGTTGTGTACTGACCCCAAAAAGTTGG > 1:18395560/1‑35 CGCAACACGTTGTGTACTGACCCCAAAAAGTTGGA < 1:3331791/35‑1 CGCAACACGTTGTGTACTGACCCCAAAAAGTTGGA < 1:9376649/35‑1 CGCAACACGTTGTGTACTGACCCCAAAAAGTTGGA < 1:1143899/35‑1 CGCAACACGTTGTGTACTGACCCCAAAAAGTTGGA > 1:6357173/1‑35 CGCAACACGTTGTGTACTGACCCCAAAAAGTTGGA < 1:16989526/35‑1 GCAACACGTTGTTTACTGACCCCAAAAAGTTGGAC > 1:16660830/1‑35 GCAACACGTTGTGTACTGACCCCAAAAAGTTGGAC < 1:10431436/35‑1 AACACGTTGTGTACTGACCCCAAAAAGTTGGACAG > 1:19215082/1‑35 AACACGTTGTGTACTGACCCCAAAAAGTTGGACAG < 1:19497009/35‑1 AACACGTTGTGTACTGACCCCAAAAAGTTGGACAG < 1:19792547/35‑1 ACACGTTGTGTACTGACCCCAAAAAGTTGGACAGT > 1:16594365/1‑35 CACGTTGTGTACTGACCCCAAAAAGTTGGACAGTT > 1:12826620/1‑35 CACGTTGTGTACTGACCCCAAAAAGTTGGACAGTT < 1:4356313/35‑1 CACGTTGTGTACTGACCCCAAAAAGTTGGACAGTT > 1:727654/1‑35 CACGTTGTGTACTGACCCCAAAAAGTTGGACAGTT < 1:7453917/35‑1 CACGTTGTGTACTGACCCCAAAAAGTTGGACAGTT > 1:2697478/1‑35 ACGTTGTGTACTGACCCCAAAAAGTTGGACAGTTA > 1:10769922/1‑35 ACGTTGTGTACTGACCCCAAAAAGTTGGACAGTTA > 1:3651220/1‑35 TCCCGGTAACGGATGAAAGCCCCGCAACACGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3268085‑3268052 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTA < REL606/3652533‑3652505 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |