New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 4085856 = | 100 (0.970) | 24 (0.250) | 5/44 | NT | 23.2% | intergenic (+54/‑95) | cpxP/fieF | periplasmic protein combats stress/ferrous iron efflux protein F |
? | REL606 | 4214283 = | 67 (0.710) | coding (1595/1650 nt) | pgi | glucose‑6‑phosphate isomerase |
GATAAAAAAAACCCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/4085872‑4085856 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caGCCACGATAGCTCGACCAATGGTCTGATTAACCG > REL606/4214283‑4214316 aaaAAAAAAAACCCCCAGCCACGATAGCTCGACCA < 1:14650465/32‑1 aaAAAAAAAACCCCCAGCCACGATAGCTCGACCAA < 1:14417619/33‑1 aaAAAAAAAACCCCCAGCCACGATAGCTCGACCAA < 1:11125523/33‑1 atAAAAAAACCCCCAGCCACGATAGCTCGACCAAT < 1:20308495/33‑1 aAAAAGAAACCCCCAGCCACGATAGCTCGACCAAT < 1:4561742/34‑1 aAAAAAAAACCCCCAGCCACGATAGCTCGACCAAT < 1:6242381/34‑1 aAAAAAAAACCCCCAGCCACGATAGCTCGACCAAT < 1:16486149/34‑1 aAAAAAAAACCACCAGCCACGATAGCTCGACCAAT < 1:5490673/34‑1 tAAAAAAATCCCCAGCCACGATAGCTCGACCAATG < 1:12278591/34‑1 AAAAAAAACCCCCAGCCACGATAGCTCGACCAATG < 1:11234372/35‑1 AAAAAAAACCCCCAGCCACGATAGCTCGACCAATG < 1:9571317/35‑1 AAAAAAAACCCCCAGCCACGATAGCTCGACCAATG < 1:7855256/35‑1 AAAAAAAACCACCAGCCACGATAGCTCGACCAATG < 1:20446137/35‑1 AAAAAAAACCACCAGCCACGATAGCTCGACCAATG < 1:15385062/35‑1 AAAAAACCCCCCAGCCACGATAGCTCGACCAATGG < 1:18818946/35‑1 AAAAAAACCCCCAGCCACGATAGCTCGACCAATGG < 1:2118457/35‑1 AAAAAAACCCCCAGCCACGATAGCTCGACCAATGG < 1:12154751/35‑1 AAAAAAACCACCAGCCACGATAGCTCGACCAATGG < 1:10149824/35‑1 AAAACCCCCAGCCACGATAGCTCGACCAATGGTCT < 1:20032548/35‑1 AAACCCCCAGCCACGATAGCTCGACCAATGGTCTG < 1:15158048/35‑1 acCCCCCAGCCACGATAGCTCGACCAATGGTCTGA < 1:2156478/33‑1 AACCCCCAGCCACGATAGCTCGACCAATGGTCTGA < 1:8010719/35‑1 AACCCCCAGCCACGATAGCTCGACCAATGGTCTGA < 1:9177471/35‑1 AACCCCCAGCCACGATAGCTCGACCAATGGTCTGA < 1:14000037/35‑1 AACCCCCAGCCACGATAGCTCGACCAATGGTCTGA < 1:6851947/35‑1 gCCCCAGCCACGATAGCTCGACCAATGGTCTGATT < 1:11703544/34‑1 CCCCAGCCACGATAGCTCGACCAATGGTCTGATTA < 1:7914919/35‑1 CCCCAGCCACGATAGCTCGACCAATGGTCTGATTA < 1:15677561/35‑1 CCCCAGCCACGATAGCTCGACCAATGGTCTGATTA < 1:9589721/35‑1 aCCAGCCACGATAGCTCGACCAATGGTCTGATTAA < 1:15416521/34‑1 CCCAGCCACGATAGCTCGACCAATGGTCTGATTAA < 1:18781774/35‑1 CCCAGCCACGATAGCTCGACCAATGGTCTGATTAA < 1:16986395/35‑1 ctAGCCACGATAGCTCGACCAATGGTCTGATTAAC < 1:661409/33‑1 CCAGCCACGATAGCTCGGCCAATGGTCTGATTAAC < 1:8952963/35‑1 CCAGCCACGATAGCTCGACCAATGGTCTGATTAAC < 1:19929136/35‑1 CCAGCCACGATAGCTCGACCAATGGTCTGATTAAC < 1:17580807/35‑1 CCAGCCACGATAGCTCGACCAATGGTCTGATTAAC < 1:15435378/35‑1 CCAGCCACGATAGCTCGACCAATGGTCTGATTAAC < 1:11245895/35‑1 CCAGCCACGATAGCTCGACCAATGGTCTGATTAAC < 1:10238223/35‑1 CCAGCCACGATAGCTCGACCAATGGTCTGATTAAC < 1:6552748/35‑1 CAGCCACGATAGCTCGACCAATGGTCTGATTAACC < 1:9732069/35‑1 CAGCCACGATAGCTCGACCAATGGTCTGATTAACC > 1:264802/1‑35 CAGCCACGATAGCTCGACCAATGGTCTGATTAACC < 1:18671073/35‑1 CAGCCACGATAGCTCGACCAATGGTCTGATTAACC < 1:16384973/35‑1 CAGCCACGATAGCTCGACCAATGGTCTGATTAACC < 1:12804321/35‑1 AGCCACGATAGCTCGGCCAATGGTCTGATTAACCG > 1:1002665/1‑35 AGCCACGATAGCTCGACCAATGGTCTGATTAACCG < 1:7752239/35‑1 AGCCACGATAGCTCGACCAATGGTCTGATTAACCG < 1:5280031/35‑1 AGCCACGATAGCTCGACCAATGGTCTGATTAACCG > 1:7940061/1‑35 AGCCACGATAGCTCGACCAATGGTCTGATTAACCG < 1:17856009/35‑1 AGCCACGATAGCTCGACAAATGGTCTGATTAACCG < 1:6291614/35‑1 GATAAAAAAAACCCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/4085872‑4085856 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caGCCACGATAGCTCGACCAATGGTCTGATTAACCG > REL606/4214283‑4214316 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |