New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3483684 = | 62 (0.600) | 11 (0.140) | 5/36 | NT | 15.9% | coding (2000/2706 nt) | malT | transcriptional regulator MalT |
? | REL606 | = 3677027 | 70 (0.910) | coding (478/987 nt) | yiaO | predicted transporter |
TCCGGTTTAGCCGTATGACGCAACCAGTTGGCAGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3483723‑3483684 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggGGGTTTTAACCGGTGCGCGCGAGTTGGTGACATC < REL606/3677027‑3676994 TCCGGTTTAGCCGTATGACGCAACCAGTTGGCAGC > 1:18600328/1‑35 TCCGGTTTAGCCGTATGACGCAACCAGTTGGCAGC < 1:17942491/35‑1 TCCGGTTTAGCCGTATGACGCAACCAGTTGGCAGC < 1:1787025/35‑1 TCCGGTTTAGCCGTATGACGCAACCAGTTGGCAGC < 1:2105234/35‑1 TCCGGTTTAGCCGTATGACGCAACCAGTTGGCAGC < 1:5570324/35‑1 TCCGGTTTAGCCGTATGACGCAACCAGTTGGCAGC < 1:6418676/35‑1 TCCGGTTTAGCCGTATGACGCAACCAGTTGGCAGC < 1:6686800/35‑1 TCCGGTTTAGCCGTATGACGCAACCAGTTGGCAGC < 1:9851235/35‑1 CCGGTTTAGCCGTATGACGCAACCAGTTGGCAGCG > 1:11507432/1‑35 CCGGTTTAGCCGTATGACGCAACCAGTTGGCAGCG < 1:1166240/35‑1 CCGGTTTAGCCGTATGACGCAACCAGTTGGCAGCG < 1:10448387/35‑1 CCGGTTTAGCCGTATGACGCAACCAGTTGGCAGCG > 1:5737224/1‑35 CCGGTTTAGCCGTATGACGCAACCAGTTGGCAGCG < 1:9717334/35‑1 CCGGTTTAGCCGTATGACGCAACCAGTTGGCAGCG < 1:16903136/35‑1 CCGGTTTAGCCGTATGACGCAACCAGTTGGCAGCG < 1:2830500/35‑1 CGGTTTAGCCGTATGACGCAACCAGTTGGCAGCGG > 1:10309629/1‑35 CGGTTTAGCCGTATGACGCAACCAGTTGGCAGCGG > 1:6085512/1‑35 CGGTTTAGCCGTATGACGCAACCAGTTGGCAGCGG < 1:4302193/35‑1 CGGTTTAGCCGTATGACGCAACCAGTTGGCAGCGG > 1:3198676/1‑35 GGTTTAGCCGTATGACGCAACCAGTTGGCAGCGGC < 1:9801273/35‑1 GGTTTAGCCGTATGACGCAACCAGTTGGCAGCGGC < 1:17667895/35‑1 GGTTTAGCCGTATGACGCAACCAGTTGGCAGCGGC < 1:2479392/35‑1 GGTTTAGCCGTATGACGCAACCAGTTGGCAGCGGC < 1:3233275/35‑1 GGTTTAGCCGTATGACGCAACCAGTTGGCAGCGGC > 1:3636077/1‑35 GGTTTAGCCGTATGACGCAACCAGTTGGCAGCGGC > 1:4268368/1‑35 GGTTTAGCCGTATGACGCAACCAGTTGGCAGCGGC < 1:10935758/35‑1 GTTTAGCCGTATGACGCAACCAGTTGGCAGCGGCG > 1:3694171/1‑35 GTTTAGCCGTATGACGCAACCAGTTGGCAGCGGCG < 1:17003596/35‑1 GTTTAGCCGTATGACGCAACCAGTTGGCAGCGGCG > 1:12335649/1‑35 GTTTAGCCGTATGACGCAACCAGTTGGCAGCGGCG < 1:1215117/35‑1 GTTTAGCCGTATGACGCAACCAGTTGGCAGCGGCG < 1:19313604/35‑1 GTTTAGCAGTATGACGCAACCAGTTGGCAGCGGCG < 1:17488682/35‑1 TTTAGCCGTATGACGCAACCAGTTGGCAGCGGGGG > 1:7396767/1‑35 TTTAGCCGTATGACGCAACCAGTTGGCAGCGGCGG > 1:15468723/1‑35 TTTAGCCGTATGACGCAACCAGTTGGCAGCGGCGG < 1:17612524/35‑1 TTAGCCGTATGACGCAACCAGTTGGCAGCGGCGGG > 1:20066823/1‑35 TTAGCCGTATGACGCAACCAGTTGGCAGCGGCGGG > 1:9010467/1‑35 TTAGCCGTATGACGCAACCAGTTGGCAGCGGCGGG > 1:19057205/1‑35 TTAGCCGTATGACGCAACCAGTTGGCAGCGGCGGG > 1:1806318/1‑35 TAGCCGTATGACGCAACCAGTTGGCAGCGGCGGGG > 1:7885428/1‑35 TAGCCGTATGACGCAACCAGTTGGCAGCGGCGGGG > 1:780707/1‑35 TAGCCGTATGACGCAACCAGTTGGCAGCGGCGGGG > 1:6201158/1‑35 AGCCGTATGACGCAACCAGTTGGCAGCGGCGGGGG > 1:813578/1‑35 AGCCGTATGACGCAACCAGTTGGCAGCGGCGGGGG > 1:13753573/1‑35 AGCCGTATGACGCAACCAGTTGGCAGCGGCGGGGG > 1:15908689/1‑35 GCCGTATGACGCAACCAGTTGGCAGCGGCGGGGGT > 1:9440539/1‑35 GCCGTATGACGCAACCAGTTGGCAGCGGCGGGGGT > 1:6398681/1‑35 CCGTATGACGCAACCAGTTGGCAGCGGCGGGGTTT > 1:17829443/1‑35 CCGTATGACGCAACCAGTTGGCAGCGGCGGGGTTT > 1:7639492/1‑35 CCGTATGACGCAACCAGTTGGCAGCGGCGGGGGTg > 1:19824252/1‑34 CCGTATGACGCAACCAGTTGGCAGCGGCGGGGGTa > 1:10875061/1‑34 CGTATGACGCAACCAGTTGGCAGCGGCGGGGGTca > 1:616238/1‑33 CGTATGACGCAACCAGTTGGCAGCGGCGGGGGTTT > 1:17509334/1‑35 GTATGACGCAACCAGTTGGCAGCGGCGGGGGTgtc > 1:9061215/1‑32 GTATGACGCAACCAGTTGGCAGCGGCGGGGGTTTT > 1:12166284/1‑35 GTATGACGCAACCAGTTGGCAGCGGCGGGGGTTTT > 1:3680537/1‑35 GTATGACGCAACCAGTTGGCAGCGGCGGGGGTGTT > 1:16284933/1‑35 TATGACGCAACCAGTTGGCAGCGGCTGGGGTTTTA > 1:4886519/1‑35 TATGACGCAACCAGTTGGCAGCGGCGGGGTTTTTt > 1:6819233/1‑34 TATGACGCAACCAGTTGGCAGCGGCGGGGGTTTca > 1:20612035/1‑33 ATGACGCAACCAGTTGGCAGCGGCGGGGGTTTTca > 1:3864093/1‑33 ATGACGCAACCAGTTGGCAGCGGCGGGGGTTTTAc > 1:11025177/1‑34 TGACGCAACCAGTTGGCAGCGGCGGGGGTTTTAAC > 1:3038184/1‑35 GACGCAACCAGTTGGCAGCGGCGGGGTTTTTAACC > 1:2638936/1‑35 CGGCGGGGGTTTTAACCGGTGCGCGCGAGTTGGTG < 1:10345779/35‑1 CGGCGGGGGTTTTAACCGGTGCGCGCGAGTTGGTG < 1:11596080/35‑1 CGGCGGGGGTTTTAACCGGTGCGCGCGAGTTGGTG < 1:3545071/35‑1 CGGCGGGGGTTTTAACCGGTGCGCGCGAGTTGGTG < 1:13833425/35‑1 GGCGGGGGTTTTAACCGGTGCGCGCGAGTTGGTGA < 1:6087948/35‑1 GGCGGGGGTTTTAACCGGTGCGCGCGAGTTGGTGA < 1:9758810/35‑1 GGCGGGGGTTTTAACCGGTGCGCGCGAGTTGGGGA > 1:11523206/1‑35 GCGGGGGTTTTAACCGGTGCGCGCGAGTTGGTGAC < 1:15511761/35‑1 GCGGGGGTTTTAACCGGTGCGCGCGAGTTGGTGAC > 1:3766953/1‑35 GCGGGGGTTTTAACCGGTGCGCGCGAGTTGGTGAC < 1:14050864/35‑1 GCGGGGGTTTTAACCGGTGCGCGCGAGTTGGTGAC < 1:10306367/35‑1 CGGGGGTTTTAACCGGTGCGCGCGAGTTGGTGACA > 1:14624145/1‑35 CGGGGGTTTTAACCGGTGCGCGCGAGTTGGTGACA < 1:8788407/35‑1 CGGGGGTTTTAACCGGTGCGCGCGAGTTGGTGACA < 1:8528177/35‑1 CGGGGGTTTTAACCGGTGCGCGCGAGTTGGGGACA > 1:11263638/1‑35 CGGGGGTTTTAACCGGTGCGCGCGAGTTGGGGACA > 1:18233792/1‑35 CGGGGGTTTTAACCGGTGCGAGCGAGTTGGTGACA < 1:17529718/35‑1 GGGGGTTTTAACCGGTGCGCGCGAGTTGGTGGCAT > 1:19759098/1‑35 GGGGGTTTTAACCGGTGCGCGCGAGTTGGTGACAT < 1:19209039/35‑1 GGGGGTTTTAACCGGTGCGCGCGAGTTGGTGACAT < 1:19071302/35‑1 GGGGGTTTTAACCGGTGCGCGCGAGTTGGGGACAT > 1:12579550/1‑35 GGGGTTTTAACCGGTGCGCGCGAGTTGGTGACATC > 1:8136435/1‑35 GGGGTTTTAACCGGTGCGCGCGAGTTGGTGACATC < 1:7589556/35‑1 GGGGTTTTAACCGGTGCGCGCGAGTTGGTGACATC < 1:14999907/35‑1 TCCGGTTTAGCCGTATGACGCAACCAGTTGGCAGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3483723‑3483684 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggGGGTTTTAACCGGTGCGCGCGAGTTGGTGACATC < REL606/3677027‑3676994 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |