New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 159874160 (0.580)10 (0.100) 3/46 NT 15.9% intergenic (‑61/+28) ydfI/ydfJ predicted mannonate dehydrogenase/predicted transporter
?REL606 = 3347592 48 (0.490)coding (552/918 nt) yhdW predicted amino‑acid transporter subunit

Only 100 of 113 total aligned reads displayed.

TAAGCAACCCAGCTGAATGGATTGTCTTACCGGAGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGTTC  >  REL606/3347558‑3347626
                                  |                                  
tAAGCAACCCAGCTGAGTGGATTGTCTTACCGGAg                                    >  1:103532/1‑35 (MQ=255)
tAAGCAACCCAGCTGAATGGATTGTCTTACCGGAg                                    >  1:7986207/1‑35 (MQ=255)
tAAGCAACCCAGCTGAATGGATTGTCTTACCGGAg                                    >  1:13358364/1‑35 (MQ=255)
 aaGCAACCCAGCTGAATGGATTGTCTTACCGGAGg                                   <  1:148485‑M2/35‑2 (MQ=255)
 aaGCAACCCAGCTGAATGGATTGTCTTACCGGAGg                                   <  1:19589235‑M2/35‑2 (MQ=255)
  aGCAACCCAGCTGAATGGATTGTCTTACCGGAGgg                                  <  1:7496982‑M2/35‑3 (MQ=255)
  aGCAACCCAGCTGAATGGATTGTCTTACCGGAGgg                                  <  1:56136‑M2/35‑3 (MQ=255)
  aGCAACCCAGCTGAATGGATTGTCTTACCGGAGGt                                  <  1:20590191/35‑1 (MQ=255)
  aGCAACCCAGCTGAATGGATTGTCTTACCGGAGGt                                  <  1:2935352/35‑1 (MQ=255)
  aGCAACCCAGCTGAATGGATTGTCTTACCGGAGGt                                  <  1:1110218/35‑1 (MQ=255)
   gCAACCCAGCTGAATGGATTGTCTTACCGGAGGtt                                 <  1:14768048/35‑1 (MQ=255)
    cAACCCAGCTGAATGGATTGTCTTACCGGAGgggg                                <  1:7998560‑M2/35‑5 (MQ=255)
     aaCCCAGCTGAATGGATTGTCTTACCGGAGggtgg                               <  1:9309469‑M2/35‑6 (MQ=255)
     aaCCCAGCTGAATGGATTGTCTTACCGGAGggggt                               <  1:16342880‑M2/35‑6 (MQ=255)
     aaCCCAGCTGAATGGATTGTCTTACCGGAGggggg                               <  1:19263462‑M2/35‑6 (MQ=255)
     aaCCCAGCTGAATGGATTGTCTTACCGGAGGTTAt                               <  1:4090808/35‑1 (MQ=255)
     aaCCCAGCTGAATGGATTGTCTTACCGGAGGTTAt                               <  1:18325469/35‑1 (MQ=255)
     aaCCCAGCTGAATGGATTGTCTTACAGGAGGTTAt                               <  1:5616985/35‑1 (MQ=255)
      aCCCAGCTGAATGGATTGTCTTACCGGAGGTTAtc                              <  1:3042736/35‑1 (MQ=255)
      aCCCAGCTGAATGGATTGTCTTACCGGAGGTTAtc                              <  1:19405621/35‑1 (MQ=255)
       cccAGCTGAATGGATTGTCTTACCGGAGggggttt                             <  1:11520705‑M2/35‑8 (MQ=255)
       cccAGCTGAATGGATTGTCTTACCGGAGGTTAtct                             <  1:7470413/35‑1 (MQ=255)
        ccAGCTGAATGGATTGTCTTACCGGAGggggtttt                            <  1:12284684‑M2/35‑9 (MQ=255)
        ccAGCTGAATGGATTGTCTTACCGGAGggggtttt                            <  1:19093200‑M2/35‑9 (MQ=255)
        ccAGCTGAATGGATTGTCTTACCGGAGggggtttt                            <  1:20260919‑M2/35‑9 (MQ=255)
        ccAGCTGAATGGATTGTCTTACCGGAGGTTAtctc                            <  1:20123822/35‑1 (MQ=255)
        ccAGCTGAATGGATTGTCTTACCGGAGGTTAtctc                            <  1:232039/35‑1 (MQ=255)
          aGCTGAATGGATTGTCTTACCGGAGggggtttttt                          <  1:14694821‑M2/35‑11 (MQ=255)
          aGCTGAATGGATTGTCTTACCGGAGggggtttttt                          <  1:16506143‑M2/35‑11 (MQ=255)
          aGCTGAATGGATTGTCTTACCGGAGggggtttttt                          <  1:9104984‑M2/35‑11 (MQ=255)
          aGCTGAATGGATTGTCTTACCGGAGGTTATCTCTa                          <  1:4168025/35‑1 (MQ=255)
          aGCTGAATGGATTGTCTTACCGGAGGTTATCTCTa                          <  1:7490865/35‑1 (MQ=255)
           gCTGAATGGATTGTCTTACCGGAGggggtttttta                         <  1:15355956‑M2/35‑12 (MQ=255)
           gCTGAATGGATTGTCTTACCGGAGggggtttttta                         <  1:4884487‑M2/35‑12 (MQ=255)
           gCTGAATGGATTGTCTTACCGGAGGTTATCTCTaa                         <  1:16813600/35‑1 (MQ=255)
           gCTGAATGGATTGTCTTACCGGAGGTTATCTCTaa                         <  1:5850449/35‑1 (MQ=255)
           gCTGAATGGATTGTCTTACCGGAGGTTATCTCTaa                         <  1:6923662/35‑1 (MQ=255)
           gCTGAATGGATTGTCTTACCGGAGGTTATCTCTaa                         <  1:12587612/35‑1 (MQ=255)
           gCTGAATGGATTGTCTTACCGGAGGTTATCTCTaa                         <  1:871365/35‑1 (MQ=255)
           gCTGAATGGATTGTCTTACCGGAGGTTATCTCTaa                         <  1:18930147/35‑1 (MQ=255)
            cTGAATGGATTGTCTTACCGGAGggggttttttaa                        <  1:10202061‑M2/35‑13 (MQ=255)
            cTGAATGGATTGTCTTACCGGAGggggttttttaa                        <  1:12349030‑M2/35‑13 (MQ=255)
            cTGAATGGATTGTCTTACCGGAGGTTATCTCTaaa                        <  1:19516747/35‑1 (MQ=255)
            cTGAATGGATTGTCTTACCGGAGGTTATCTCTaaa                        <  1:11300018/35‑1 (MQ=255)
             tGAATGGATTGTCTTACCGGAGGTTATCTCTAAAg                       <  1:2119981/35‑1 (MQ=255)
              gAATGGATTGTCTTACCGGAGGTTATCTCTAAAGa                      <  1:9841935/35‑1 (MQ=255)
              gAATGGATTGTCTTACCGGAGGTTATCTCTAAAGa                      <  1:6721405/35‑1 (MQ=255)
               aaTGGATTGTCTTACCGGAGGTTATCTCTAAAGaa                     <  1:226198/35‑1 (MQ=255)
                aTGGATTGTCTTACCGGAGGTTATCTCTAAAGAAc                    <  1:5233361/35‑1 (MQ=255)
                aTGGATTGTCTTACCGGAGGTTATCTCTAAAGAAc                    <  1:16981372/35‑1 (MQ=255)
                aTGGATTGTCTTACCGGAGGTTATCTCTAAAGAAc                    <  1:6641189/35‑1 (MQ=255)
                 tGGATTGTCTTACCGGAGGTTATCTCTAAAGAAcc                   <  1:4062049/35‑1 (MQ=255)
                 tGGATTGTCTTACCGGAGGTTATCTCTAAAGAAcc                   <  1:14769184/35‑1 (MQ=255)
                 tGGATTGTCTTACCGGAGGTTATCTCTAAAGAAcc                   <  1:17040956/35‑1 (MQ=255)
                 tGGATTGTCTTACCGGAGGTTATCTCTAAAGAAcc                   <  1:6156553/35‑1 (MQ=255)
                 tGGATTGTCTTACCGGAGGTTATCTCTAAAGAAcc                   <  1:1960529/35‑1 (MQ=255)
                 tGGATTGTCTTACCGGAGGTTATCTCTAAAGAAcc                   <  1:9821246/35‑1 (MQ=255)
                  ggATTGTCTTACCGGAGGTTATCTCTAAAGAACCg                  <  1:2157838/35‑1 (MQ=255)
                  ggATTGTCTTACCGGAGGTTATCTCTAAAGAACCg                  <  1:1822559/35‑1 (MQ=255)
                  ggATTGTCTTACAGGAGGTTATCTCTAAAGAACCg                  <  1:6345707/35‑1 (MQ=255)
                   gATTGTCTTACCGGAGGTTATCTCTAAAGAACCGc                 <  1:7638251/35‑1 (MQ=255)
                     ttGTCTTACCGGAGGTTATCTCTAAAGAACCGCtt               <  1:3060220/35‑1 (MQ=255)
                      tGTCTTACCGGAGGTTATCTCTAAAGAACCGCTTg              <  1:14683418/35‑1 (MQ=255)
                      tGTCTTACCGGAGGTTATCTCTAAAGAACCGCTTg              <  1:9467279/35‑1 (MQ=255)
                          ttACCGGAGGTTATCTCTAAAGAACCGCTTGGGcc          <  1:13012562/35‑1 (MQ=255)
                           tcccGGAGGTTATCTCTAAAGAACCGCTTGGGCCg         <  1:18319362/33‑1 (MQ=255)
                           tACCGGAGTTTATCTCTAAAGAACCGCTTGGGCCg         <  1:4759992/35‑1 (MQ=255)
                           tACCGGAGGTTATCTCTAAAGAACCGCTTGGGCCg         <  1:17411987/35‑1 (MQ=255)
                           tACCGGAGGTTATCTCTAAAGAACCGCTTGGGCCg         <  1:19357229/35‑1 (MQ=255)
                            cccGGAGGTTATCTCTAAAGAACCGCTTGGGCCgg        <  1:2869503/34‑1 (MQ=255)
                            aCCGGAGGTTATCTCTAAAGAACCGCTTGGGCCgg        <  1:11688395/35‑1 (MQ=255)
                            aCCGGAGGTTATCTCTAAAGAACCGCTTGGGCCgg        <  1:5658026/35‑1 (MQ=255)
                             ccGGAGGTTATCTCTAAAGAACCGCTTGGGCCGGt       >  1:18007527/1‑35 (MQ=255)
                             ccGGAGGTTATCTCTAAAGAACCGCTTGGGCCGGt       <  1:6464423/35‑1 (MQ=255)
                             ccGGAGGTTATCTCTAAAGAACCGCTTGGGCCGGt       <  1:14427567/35‑1 (MQ=255)
                             ccGGAGGTTATCTCTAAAGAACCGCTTGGGCCGGt       >  1:14739559/1‑35 (MQ=255)
                              cGGAGGTTATCTCTAAAGAACCGCTTGGGCCGGTa      <  1:3465443/35‑1 (MQ=255)
                              cGGAGGTTATCTCTAAAGAACCGCTTGGGCCGGTa      <  1:10735594/35‑1 (MQ=255)
                               ggAGGTTATCTCTAAAGAACCGCTTGGGGCGGTAg     >  1:8745537/1‑35 (MQ=255)
                               ggAGGTTATCTCTAAAGAACCGCTTGGGCCGGTAg     <  1:3709218/35‑1 (MQ=255)
                               ggAGGTTATCTCTAAAGAACCGCTTGGGCCGGGAg     >  1:5642395/1‑35 (MQ=255)
                                gAGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGt    >  1:6218599/1‑35 (MQ=255)
                                gAGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGt    <  1:1829801/35‑1 (MQ=255)
                                gAGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGt    >  1:13925777/1‑35 (MQ=255)
                                gAGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGt    >  1:15476362/1‑35 (MQ=255)
                                gAGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGt    >  1:5602984/1‑35 (MQ=255)
                                gAGGTTATCTCTAAAGAACCGCTTGGGCCAGTAGt    <  1:9653044/35‑1 (MQ=255)
                                gAGGTTATCTCTAAAGAACCGATTGGGCCGGTAGt    <  1:6925126/35‑1 (MQ=255)
                                 aGGTTATCTCTAAAGAACCGCTTGGGCCTGTAGtt   >  1:9620844/1‑35 (MQ=255)
                                 aGGTTATCTCTAAAGAACCGCTTGGGCCTGTAGtt   >  1:20387886/1‑35 (MQ=255)
                                 aGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGtt   <  1:11888001/35‑1 (MQ=255)
                                 aGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGtt   >  1:1772356/1‑35 (MQ=255)
                                 aGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGtt   <  1:2164887/35‑1 (MQ=255)
                                 aGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGtt   >  1:17075564/1‑35 (MQ=255)
                                 aGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGtt   >  1:2487227/1‑35 (MQ=255)
                                 aGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGtt   <  1:2948463/35‑1 (MQ=255)
                                  ggTTATCTCTAAAGAACCGCTTGGGCCGGTAGTtc  >  1:13042592/1‑35 (MQ=255)
                                  ggTTATCTCTAAAGAACCGCTTGGGCCGGTAGTtc  <  1:18035935/35‑1 (MQ=255)
                                  ggTTATCTCTAAAGAACCGCTTGGGCCGGTAGTtc  <  1:5635746/35‑1 (MQ=255)
                                  ggTTATCTCTAAAGAACCGCTTGGGCCGGTAGGtc  >  1:15985312/1‑35 (MQ=255)
                                  |                                  
TAAGCAACCCAGCTGAATGGATTGTCTTACCGGAGGTTATCTCTAAAGAACCGCTTGGGCCGGTAGTTC  >  REL606/3347558‑3347626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.