New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1510513 = | 81 (0.790) | 16 (0.210) | 4/36 | NT | 22.7% | coding (256/681 nt) | narV | nitrate reductase 2 (NRZ), gamma subunit |
? | REL606 | 4138913 = | 48 (0.620) | coding (563/918 nt) | oxyR | DNA‑binding transcriptional dual regulator |
Only 100 of 135 total aligned reads displayed.
AACCGCGAATGCGTACCGATGGCCGATCTGGCAGGGGAAAAACTGCTGATGCTGGAAGATGGTCACTGT > REL606/4138879‑4138947 | acccGCGAATGCGTACAGATGGCCGATCTGGCAgg < 1:2976537/33‑1 (MQ=37) aaCCGCGAATGCGTACCGATGGCCGATCTGGCAgg > 1:15809659/1‑35 (MQ=255) aCCGCGAATGCGTACCGATGGCCGATCTGGCAggg > 1:15799671/1‑35 (MQ=255) aCCGCGAATGCGTACCGATGGCCGATCTGGCAggg > 1:18655832/1‑35 (MQ=255) ctggatgtacgcgtggtttttgccagtggcagggg > 1:14217289‑M2/33‑35 (MQ=255) ctggatgtacgcgtggtttttgccagtggcagggg > 1:6992413‑M2/33‑35 (MQ=255) ctggatgtacgcgtggtttttgccagtggcagggg > 1:14286753‑M2/33‑35 (MQ=255) ccGCGAATGCGTACCGATGGCCGATCTGGCAgggg > 1:12498131/1‑35 (MQ=255) tggatgtacgcgtggtttttgccagtggcaggggg > 1:18372490‑M2/32‑34 (MQ=255) tggatgtacgcgtggtttttgccagtggcagGGGa > 1:13793872‑M2/32‑35 (MQ=255) tggatgtacgcgtggtttttgccagtggcagGGGa > 1:9157695‑M2/32‑35 (MQ=255) cgcgAATGCGTACCGATGGCCGATCTGGCAGGGGa > 1:14468037/1‑35 (MQ=255) ggatgtacgcgtggtttttgccagtggcagGGGaa > 1:4731753‑M2/31‑35 (MQ=255) ggatgtacgcgtggtttttgccagtggcagGGAaa > 1:155723‑M2/31‑35 (MQ=255) gcgAATGCGTACCGATGGCCGATCTGGCAGGGGaa > 1:13260632/1‑35 (MQ=255) gcgAATGCGTACCGATGGCCGATCTGGCAGGGGaa > 1:5420297/1‑35 (MQ=255) cgAATGCGTACCGATGGCCGATCTGGCAGGGGaaa > 1:18980454/1‑35 (MQ=255) gAATGCGTACCGATGGCCGATCTGGCATGGGaaaa > 1:12971787/1‑35 (MQ=255) gAATGCGTACCGATGGCCGATCTGGCAGGGGgaaa > 1:3584005/1‑35 (MQ=255) gAATGCGTACCGATGGCCGATCTGGCAGGGGaaaa > 1:12865372/1‑35 (MQ=255) gAATGCGTACCGATGGCCGATCTGGCAGGGGaaaa > 1:3577497/1‑35 (MQ=255) atgtacgcgtggtttttgccagtggcagGggaaca > 1:4848659‑M2/29‑33 (MQ=255) atgtacgcgtggtttttgccagtggcagGGGgaaa > 1:15076180‑M2/29‑35 (MQ=255) atgtacgcgtggtttttgccagtggcagGGGaaaa > 1:5168016‑M2/29‑35 (MQ=255) atgtacgcgtggtttttgccagtggcagGGGaaaa > 1:16175088‑M2/29‑35 (MQ=255) tgtacgcgtggtttttgccagtggcagGGGaacaa > 1:6488679‑M2/28‑35 (MQ=255) tgtacgcgtggtttttgccagtggcagGGGaaaaa > 1:15300945‑M2/28‑35 (MQ=255) tgtacgcgtggtttttgccagtggcagGGGaaaaa > 1:4055017‑M2/28‑35 (MQ=255) aaTGCGTACCGATGGCCGATCTGGCAGGGGgaaaa > 1:9805540/1‑35 (MQ=255) aaTGCGTACCGATGGCCGATCTGGCAGGGGaaaaa > 1:12149921/1‑35 (MQ=255) gtacgcgtggtttttgccagtggcagGGgaaaaaa > 1:18051292‑M2/27‑34 (MQ=255) gtacgcgtggtttttgccagtggcagGGGAAAAAc > 1:3218785‑M2/27‑35 (MQ=255) gtacgcgtggtttttgccagtggcagGGGAAAAAc > 1:18133548‑M2/27‑35 (MQ=255) aTGCGTACCGATGGCCGATCTGGCAGGGGAAAAAc > 1:6035022/1‑35 (MQ=255) aTGCGTACCGATGGCCGATCTGGCAGGGGAAAAAc > 1:6945355/1‑35 (MQ=255) tacgcgtggtttttgccagtggcagGggaaaaaat > 1:13470823‑M2/26‑33 (MQ=255) tGCGTACCGATGGCCGATCTGGCAGGGGAAAAAct > 1:7124320/1‑35 (MQ=255) ggCGTCCCGTTGGCCGATCTGGCAGGGGAAAAAct < 1:3959085/34‑1 (MQ=37) cGTACCGATGGCCGATCTGGCAGGGGAGAAActgc > 1:17967763/1‑35 (MQ=255) cGTACCGATGGCCGATCTGGCAGGGGAAAAActgc > 1:16952560/1‑35 (MQ=255) gtcccGATGGCCGATCTGGCAGGGGAAAAActgct > 1:1228107/4‑35 (MQ=255) gTACCTATGGCCGATCTGGCAGGGGAAAAActgct > 1:6243877/1‑35 (MQ=255) gTACCGATGGCCGATCTGGCAGGGGAAAAActgct > 1:2686320/1‑35 (MQ=255) gTACCGATGGCCGATCTGGCAGGGGAAAAActgct > 1:12514498/1‑35 (MQ=255) gTACCGATGGCCGATCTGGCAGGGGAAAAActgct > 1:7593221/1‑35 (MQ=255) ctACCGTTGGCCGATCTGGCAGGGGAAAAActgct < 1:12478544/34‑1 (MQ=255) cccGTTGGCCGATCTGGCAGGGGAAAAACTGCTGa < 1:19513823/34‑1 (MQ=255) aCCGTTGGCCGATCTGGCAGGGGAAAAACTGCTGa < 1:8019519/35‑1 (MQ=255) aCCGATGGCCGATCTGGCAGGGGAAAAACTGCTGa > 1:12293729/1‑35 (MQ=255) gtttGGCCGATCTGGCAGGGGAAAAACTGCTGATg < 1:15605072/32‑1 (MQ=255) cGATGGCCGATCTGGCAGGGGAAAAACTGCTGATg > 1:19259164/1‑35 (MQ=255) tttGGCCGATCTGGCAGGGGAAAAACTGCTGATGc < 1:8469691/33‑1 (MQ=255) gATGGCCGATCTGGCAGGGGAAAAACTGCTGATGc > 1:14320447/1‑35 (MQ=255) aTGGCCGATCTGGCAGGGGAAAAACTGCTGATGCt > 1:2379850/1‑35 (MQ=255) tGGCCGATCTGGCAGGGGAAAAACTGCTGATGCTg > 1:15880767/1‑35 (MQ=255) tGGCCGATCTGGCAGGGGAAAAACTGCTGATGCTg > 1:19280179/1‑35 (MQ=255) ggCCGATCTGGCAGGGGAAAAACTGCTGATGCTgg < 1:18907963/35‑1 (MQ=255) gCCGATCTGGCAGGGGAAAAACTGCTGATGCTGGa < 1:16172601/35‑1 (MQ=255) ccGATCTGGCAGGGGAAAAACTGCTGATGCTGGaa > 1:17830555/1‑35 (MQ=255) ccGATCTGGCAGGGGAAAAACTGCTGATGCTGGaa > 1:3204098/1‑35 (MQ=255) cGATCTGGCAGGGGAAAAACTGCTGATGCTGGAAg > 1:16573692/1‑35 (MQ=255) cGATCTGGCAGGGGAAAAACTGCTGATGCTGGAAg < 1:17412218/35‑1 (MQ=255) gATCTGGCAGGGGAAAAACTGCTGATGCTGGAAGa > 1:10585394/1‑35 (MQ=255) aTCTTGCAGGGGAAAAACTGCTGATGCTGGAAGAt > 1:19166291/1‑35 (MQ=255) aTCTGGCAGGGGAAAAACTGCTGATGCTGGAAGAt > 1:1082552/1‑35 (MQ=255) aTCTGGCAGGGGAAAAACTGCTGATGCTGGAAGAt > 1:11890243/1‑35 (MQ=255) aTCTGGCAGGGGAAAAACTGCTGATGCTGGAAGAt > 1:17569481/1‑35 (MQ=255) aTCTGGCAGGGGAAAAACTGCTGATGCTGGAAGAt < 1:469446/35‑1 (MQ=255) aTCTGGCAGGGGAAAAACTGCTGATGCTGGAAGAt > 1:18298169/1‑35 (MQ=255) tCTGGCAGGGGAAAAACTGCTGATGCTGGAAGATg < 1:11389495/35‑1 (MQ=255) tCTGGCAGGGGAAAAACTGCTGATGCTGGAAGATg < 1:15566452/35‑1 (MQ=255) tCTGGCAGGGGAAAAACTGCTGATGCTGGAAGATg < 1:8628718/35‑1 (MQ=255) tCTGGCAGGGGAAAAACTGCTGATGCTGGAAGATg > 1:2876676/1‑35 (MQ=255) tCTGGCAGGGGAAAAACTGCTGATGCTGGAAGATg > 1:14008592/1‑35 (MQ=255) cTGGCAGGGGAAAAACTGCTGATGCTGGAAGATgg > 1:8238626/1‑35 (MQ=255) cTGGCAGGGGAAAAACTGCTGATGCTGGAACATgg > 1:11564281/1‑35 (MQ=255) tggcagGGGAAAAACTGCTGATGCTGGAAGATGGt > 1:17391189‑M2/7‑35 (MQ=255) tggcagGGGAAAAACTGCTGATGCTGGAAGATGGt > 1:2605623‑M2/7‑35 (MQ=255) gggCGGGGAAAAACCTGCTGATGCTGGAAGATGGt < 1:3757746/34‑1 (MQ=21) ggcagTGGAAAAACTGCTGATGCTGGAAGATGGTc > 1:14774237‑M2/6‑35 (MQ=255) ggcagGGGAAAAACTGCTGATGCTGGAAGATGGTc > 1:8323569‑M2/6‑35 (MQ=255) ggcagGGGAAAAACTGCTGATGCTGGAAGATGGTc < 1:6353235‑M2/30‑1 (MQ=255) ggcagGGGAAAAACTGCTGATGCTGGAAGATGGTc < 1:15790327‑M2/30‑1 (MQ=255) ggCAGTGAAAAAACTGCTGATGCTGGAAGATGGTc < 1:2301764/35‑1 (MQ=25) gcagGGGAAAAACTGCTGATGCTGGAAGATGGTCa < 1:12415044‑M2/31‑1 (MQ=255) cagGGGAAAAACTGCTGATGCTGGAAGATGGTCAc > 1:11399177‑M2/4‑35 (MQ=255) cagGGGAAAAACTGCTGATGCTGGAAGATGGTCAc > 1:8678283‑M2/4‑35 (MQ=255) agGGGAAAACCTGCTGATGCTGGAAGATGGTCACt < 1:19831934‑M2/33‑1 (MQ=255) agGGGAAAAACTGCTGATGCTGGAAGATGGTGACt < 1:13699389‑M2/33‑1 (MQ=255) agGGGAAAAACTGCTGATGCTGGAAGATGGTCACt > 1:5665835‑M2/3‑35 (MQ=255) agGGGAAAAACTGCTGATGCTGGAAGATGGTCACt > 1:5554757‑M2/3‑35 (MQ=255) agGGGAAAAACTGCTGATGCTGGAAGATGGTCACt > 1:4030228‑M2/3‑35 (MQ=255) agGGGAAAAACTGCTGATGCTGGAAGATGGTCACt > 1:10045599‑M2/3‑35 (MQ=255) ggggAAAACCTGCTGATGCTGGAAGATGGTCGCTg < 1:18957654/35‑1 (MQ=25) gGGGAAAACCTGCTGATGCTGGAAGATGGTCACTg < 1:7880410‑M2/34‑1 (MQ=255) gGGGAAAAACTGCTGATGCTGGAAGATGGTCACTg > 1:18648749‑M2/2‑35 (MQ=255) gGGGAAAAACTGCTGATGCTGGAAGATGGTCACTg < 1:12228879‑M2/34‑1 (MQ=255) gggAAAACCTGCTGATGCTGGAAGATGGTCACTGt < 1:3183159/35‑1 (MQ=255) gggAAAACCTGCTGATGCTGGAAGATGGTCACTGt < 1:18365403/35‑1 (MQ=255) gggAAAACCTGCTGATGCTGGAAGATGGTCACTGt < 1:8810024/35‑1 (MQ=255) | AACCGCGAATGCGTACCGATGGCCGATCTGGCAGGGGAAAAACTGCTGATGCTGGAAGATGGTCACTGT > REL606/4138879‑4138947 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |