Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 2,122,426 IS150 (–) +3 bp 46.2% coding (198‑200/216 nt) ECB_02013 ← conserved hypothetical protein; putative exported protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2122426 =47 (0.520)48 (0.470) 32/48 NT 47.2% coding (200/216 nt) ECB_02013 conserved hypothetical protein; putative exported protein
?REL606 = 2775877 NA (NA)noncoding (1/1443 nt) IS150 repeat region
* ? REL606 = 212242846 (0.540)32 (0.320) 21/46 NT 37.7% coding (198/216 nt) ECB_02013 conserved hypothetical protein; putative exported protein
?REL606 2774435 = NA (NA)noncoding (1443/1443 nt) IS150 repeat region

Only 100 of 193 total aligned reads displayed.

GTACCGTTGAAAGCCCCTACTGGTGACACCCTAAATATCCCTTACACGGGCTTATTTTTTTATGCATAA  >  REL606/2122394‑2122462
                                  |                                  
gtcccGTTGAAAGCCCCTACTGGTGACACCCTaaa                                    <  1:9832030/32‑1 (MQ=255)
atttcatcgtccaacaaaatgggtgcagtacaaaa                                    <  1:8538996‑M1/3‑1 (MQ=255)
atttcatcgtccaacaaaatgggtgcagtacaaaa                                    <  1:16426135‑M1/3‑1 (MQ=255)
atttcatcgtccaacaaaatgggtgcagtacaaaa                                    <  1:8175373‑M1/3‑1 (MQ=255)
atACAGTTGAAAGCCCCTACTGGTGACGCCCTaaa                                    <  1:4401612/34‑1 (MQ=37)
 tttcatcgtccaacaaaatgggtgcagtacaAAat                                   >  1:184065‑M1/32‑35 (MQ=255)
 tcccgtTGAAAGCCCCTACTGGTGACACCCTAAAt                                   <  1:19995641‑M1/33‑2 (MQ=255)
 tACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt                                   <  1:17312213‑M1/35‑2 (MQ=255)
 tACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt                                   >  1:18472899‑M1/1‑34 (MQ=255)
 tACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt                                   >  1:13277831‑M1/1‑34 (MQ=255)
 tACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt                                   <  1:8103723‑M1/35‑2 (MQ=255)
 tACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt                                   >  1:7500808‑M1/1‑34 (MQ=255)
  aCCGTTGAAAGCCCCTACTGGTGACACCCTAAata                                  >  1:5328589/1‑35 (MQ=255)
  aCCGTTGAAAGCCCCTACTGGTGACACCCTAAata                                  >  1:5446587/1‑35 (MQ=255)
   tcatcgtccaacaaaatgggtgcagtacaAAatat                                 >  1:5725202‑M1/30‑35 (MQ=255)
   cctttGAAAGCCCCTACTGGTGACACCCTAAatat                                 <  1:15711197/32‑1 (MQ=255)
    cGTTGAAAGCCCCTACTGGTGACACCCTAAATATc                                <  1:1877298/35‑1 (MQ=255)
     gTTGAAAGCCCCTACTGGTGACACCCTAAAtgtac                               >  1:15149091‑M1/1‑30 (MQ=255)
     gTTGAAAGCCCCTACTGGTGACACCCTAAATATcc                               <  1:15831539/35‑1 (MQ=255)
     gTTGAAAGCCCCTACTGGTGACACCATAAAtgtac                               <  1:18277533‑M1/35‑6 (MQ=255)
      ttGAAAGCCCCTACTGGTGACACCCTAAAtgtact                              >  1:20558175‑M1/1‑29 (MQ=255)
      tcgtccaacaaaatgggtgcagtacaAAATATccc                              <  1:2047616‑M1/9‑1 (MQ=255)
      tcgtccaacaaaatgggtgcagtacaAAATATccc                              >  1:3099599‑M1/27‑35 (MQ=255)
       cgtccaacaaaatgggtgcagtacaAAATATCCCt                             >  1:4595473‑M1/26‑35 (MQ=255)
       cgtccaaaaaaatgggtgcagtacaAAATATCCCt                             >  1:18353084‑M1/26‑35 (MQ=255)
        gtccaacaaaatgggtgcagtacaAAATATCCCtt                            >  1:3620244‑M1/25‑35 (MQ=255)
        gAAAGCCCCTACTGGTGACACCCTAAATATCCCtt                            <  1:16482819/35‑1 (MQ=255)
        gAAAGCCCCTACTGGTGACACCCTAAATATCCCtt                            >  1:10748749/1‑35 (MQ=255)
          aaGCCCCTACTGGTGACACCCTAAATATCCCTTac                          <  1:2324629/35‑1 (MQ=255)
          aaGCCCCGACTGGTGACTCCCTAAATATCCCTTac                          <  1:11259095/35‑1 (MQ=255)
           caacaaaatgggtgcagtacaAAATATCCCTTaca                         >  1:5645837‑M1/22‑35 (MQ=255)
           aGCCCCTACTGGTGACACCCTAAATATCCCTTaca                         >  1:10063833/1‑35 (MQ=255)
           aGCCCCTACTGGTGACACCCTAAATATCCCTTaca                         >  1:13258128/1‑35 (MQ=255)
           aGCCCCTACTGGTGACACCCTAAATATCCCTTaca                         <  1:15016791/35‑1 (MQ=255)
            gCCCCTACTGGTGACACCCTAAATATCCCTTacac                        <  1:2516732/35‑1 (MQ=255)
            gCCCCTACTGGTGACACCCTAAATATCCCTTacac                        <  1:14401906/35‑1 (MQ=255)
            aacaaaatgggtgcagtacaAAATATCCCTTacac                        >  1:13903239‑M1/21‑35 (MQ=255)
             ccccTACTGGTGACACCCTAAATATCCCTTACACg                       <  1:11394386/35‑1 (MQ=255)
             acaaaatgggtgcagtacaAAATATCCCTTACACg                       <  1:5231344‑M1/16‑1 (MQ=255)
             acaaaatgggtgcagtacaAAATATCCCTTACACg                       >  1:5387713‑M1/20‑35 (MQ=255)
             acaaaatgggtgcagtacaAAATACCCCTTACACg                       >  1:9599123‑M1/20‑35 (MQ=255)
               ccTACTGGTGACACCCTAAAtgtactgaccccaaa                     <  1:4694058‑M1/35‑16 (MQ=255)
               ccTACTGGTGACACCCTAAATATCCCTTACACggg                     >  1:15803092/1‑35 (MQ=255)
               actACTGGTGACACCCTAAAtgtactgaccccaaa                     <  1:17889360‑M1/34‑16 (MQ=255)
               aaaatgggtgcagtacaAAATATCCCTTACACggg                     >  1:6991668‑M1/18‑35 (MQ=255)
                cTACTGGTGACACCCTAAATATCCCTTACACGGGc                    <  1:19645282/35‑1 (MQ=255)
                cTACTGGTGACACCCTAAATATCCCTTACACCGGc                    >  1:88257/1‑35 (MQ=255)
                aaatgggtgcagtacaAAATATCCCTTACACGGGc                    >  1:15638050‑M1/17‑35 (MQ=255)
                 tACTGGTGACACCCTAAATATCCCTTACACGGGCt                   <  1:771243/35‑1 (MQ=255)
                 aatgggtgcagtacaAAATATCCCTTACACGGGCt                   <  1:12166102‑M1/20‑1 (MQ=255)
                 aatgggtgcagtacaAAATATCCCTTACACGGGCt                   >  1:5495212‑M1/16‑35 (MQ=255)
                  atgggtgcagtacaAAATATCCCTTACACGGGCtt                  <  1:3301895‑M1/21‑1 (MQ=255)
                  aCTGGTGACGCCCTAAATATCCCTTACACGGGCtt                  <  1:2431146/35‑1 (MQ=255)
                  aCTGGTGACACCCTAAAtgtactgaccccaaaaag                  >  1:6713694‑M1/1‑17 (MQ=255)
                   tgggtgcagtacaAAATATCCCTTACACGGGCTTa                 >  1:8599023‑M1/14‑35 (MQ=255)
                   tgggtgcagtacaAAATATCCCTTACACGGGCTTa                 >  1:3757594‑M1/14‑35 (MQ=255)
                   tgggtgcagtacaAAATATCCCTTACACGGGCTTa                 >  1:13003551‑M1/14‑35 (MQ=255)
                   tgggtgcagtacaAAATATCCCTTACACGGGCTTa                 >  1:20238126‑M1/14‑35 (MQ=255)
                   cTGGTGACACCCTAAATATCCCTTACACGGGCTTa                 >  1:9817432/1‑35 (MQ=255)
                    tGGTGACACCCTAAAtgtactgaccccaaaaagtt                >  1:17765434‑M1/1‑15 (MQ=255)
                    tGGTGACACCCTAAATATCCCTTACACGGGCTTAt                >  1:8397892/1‑35 (MQ=255)
                    gggtgcagtacaAAATATCCCTTACACGGGCTTAt                <  1:9238744‑M1/23‑1 (MQ=255)
                    gggtgcagtacaAAATATCCCTTACACGGGCTTAt                <  1:7800319‑M1/23‑1 (MQ=255)
                     ggtgcagtacaAAATATCCCTTACACGGGCTTAtt               <  1:14204875‑M1/24‑1 (MQ=255)
                     ggTGACACCCTAAAtgtactgaccccaaaaagttg               <  1:12556894‑M1/35‑22 (MQ=255)
                     ggTGACACCCTAAATATCCCTTACACGGGCTTAtt               >  1:1712562/1‑35 (MQ=255)
                      gtgcagtacaAAATATCCCTTACACGGGCTTAttt              <  1:15274977‑M1/25‑1 (MQ=255)
                      gTGACACCCTAAAtgtactgaccccaaaaagttgg              <  1:389708‑M1/35‑23 (MQ=255)
                      gTGACACCCTAAATATCCCTTACACGGTCTTAttt              >  1:15582730/1‑35 (MQ=255)
                      gTGACACCCTAAATATCCCTTACACGGGCTTAttt              <  1:18575590/35‑1 (MQ=255)
                      gTGACACCCTAAATATCCCTTACACGGGCTTAttt              <  1:11007340/35‑1 (MQ=255)
                       tgcagtacaAAATATCCCTTACACGGGCTTAtttt             >  1:12128975‑M1/10‑35 (MQ=255)
                       tgcagtacaAAATATCCCTTACACGGGCTTAtttt             <  1:15873634‑M1/26‑1 (MQ=255)
                       tGACACCCTAAAtgtactgaccccaaaaagttgga             >  1:13594725‑M1/1‑12 (MQ=255)
                       tGACACCCTAAAtgtactgaccccaaaaagttgga             >  1:8710390‑M1/1‑12 (MQ=255)
                        gcagtacaAAATATCCCTTACACGGGCTTAttttt            >  1:10121850‑M1/9‑35 (MQ=255)
                        gcagtacaAAATATCCCTTACACGGGCTTAttttt            <  1:13431634‑M1/27‑1 (MQ=255)
                        gcagtacaAAATATCCCTTACACGGGCTTAttttt            <  1:19115386‑M1/27‑1 (MQ=255)
                        gACACCCTAAAtgtactgaccccaaaaagttggac            >  1:10864864‑M1/1‑11 (MQ=255)
                        gACACCCTAAATATCCCTTACACGGGCTTAttttt            <  1:19575699/35‑1 (MQ=255)
                         cagtacaAAATATCCCTTACACGGGCTTAtttttt           <  1:256627‑M1/28‑1 (MQ=255)
                         acacCCTAAATATCCCTTACACGGGCTTAtttttt           >  1:20598909/1‑35 (MQ=255)
                          cacCCTAAAtgtactgaccccaaaaagttggacag          <  1:16988363‑M1/35‑27 (MQ=255)
                          cacCCTAAATATCCCTTACACGGGCTTAttttttt          >  1:9455197/1‑35 (MQ=255)
                           gtacaAAATATCCCTTACACGGGCTTATTTTTTTa         <  1:19782025‑M1/30‑1 (MQ=255)
                            tacaAAATATCCCTTACACGGGCTTATTTTTTTAt        <  1:7331156‑M1/31‑1 (MQ=255)
                            cccTAAAtgtacttaccccaaaaagttggacagtt        >  1:6307404‑M1/1‑7 (MQ=255)
                             ccTAAAtgtactgaccccaaaaagttggacagtta       >  1:15802065‑M1/1‑6 (MQ=255)
                             ccTAAATATCCCTTACACGGGCTTATTTTTTTATg       <  1:294090/35‑1 (MQ=255)
                             acaAAATATCCCTTACACGGGCTTATTTTTTTATg       <  1:2530114‑M1/32‑1 (MQ=255)
                              caAAATATCCCTTACACGGGCTTATTTTTTTATGc      <  1:19370217‑M1/33‑1 (MQ=255)
                              cTAAAtgtactgaccccaaaaagttggacagttaa      <  1:3135134‑M1/35‑31 (MQ=255)
                               tAAATATCCCTTACACGGGCTTATTTTTTTATGCa     <  1:16647539/35‑1 (MQ=255)
                                aaatgtactgaccccaaaaagttggacagttaaac    >  1:9052099‑M1/1‑3 (MQ=255)
                                aaatgtactgaccccaaaaagttggacagttaaac    <  1:1194522‑M1/35‑33 (MQ=255)
                                aaaTATCCCTTACACGGGCTTATTTTTTTATGCAt    >  1:11774335/1‑35 (MQ=255)
                                aaaTATCCCTTACACGGGCTTATTTTTTTATGCAt    <  1:5908023/35‑1 (MQ=255)
                                 aatgtactgaccccaaaaagttggacagttaaaca   >  1:15384473‑M1/1‑2 (MQ=255)
                                 aaTATCCCTTACACGGGCTTATTTTTTTATGCATa   >  1:12676686/1‑35 (MQ=255)
                                  atatCACTTACACGGGCTTATTTTTTTATGCATaa  <  1:7101560/35‑1 (MQ=255)
                                  |                                  
GTACCGTTGAAAGCCCCTACTGGTGACACCCTAAATATCCCTTACACGGGCTTATTTTTTTATGCATAA  >  REL606/2122394‑2122462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.