New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 640115 = | 106 (1.030) | 28 (0.380) | 5/34 | NT | 24.6% | intergenic (+33/+22) | cspE/ccrB | cold shock protein E/camphor resistance protein CrcB |
? | REL606 | 2746531 = | 97 (1.330) | coding (671/873 nt) | hypB | GTP hydrolase involved in nickel liganding into hydrogenases |
Only 100 of 238 total aligned reads displayed.
CTTTCCGTTACCGAAGGTGAAGACAAACCGCTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTGATG > REL606/2746497‑2746565 | cTTTCCGTTACCGAAGGTGAAGACAAACCGCTGaa > 1:11301154/1‑35 (MQ=255) tttCCGTTACCGAAGGTGAAGACAAACCGCTGaaa > 1:10036353/1‑35 (MQ=255) cGTTACCGAAGGTGAAGACAAACCGCTGAAATATc > 1:12324214/1‑35 (MQ=255) gTTACCTAAGGTGAAGACAAACCGCTGAAATATcc > 1:7407851/1‑35 (MQ=255) ttACCGAAGGTGAAGACAAACCGCTGAAATATcca > 1:249256/1‑34 (MQ=255) aCCGAAGGTGAAGACAAACCGCTGAAATATCCGCa > 1:20259139/1‑35 (MQ=255) aCCGAAGGTGAAGACAAACCGCTGAAATATCCGCa > 1:11876849/1‑35 (MQ=255) ccGAAGGTGAAGACAAACCGCTGAAATATCCGCat > 1:8514345/1‑35 (MQ=255) ccGAAGGTGAAGACAAACCGCTGAAATATCCGCat > 1:19548461/1‑35 (MQ=255) ccGAAGGTGAAGACAAACCGCTGAAATATCCGCat > 1:10219254/1‑35 (MQ=255) ccGAAGGTGAAGACAAACCGCTGAAATATCCGCat > 1:1424060/1‑35 (MQ=255) cGAATGTGAAGACAAACCGCTGAAATATCCGCata > 1:6102584/1‑35 (MQ=255) cGAAGGTGAAGACAAACCGCTGAAATATCCGCata > 1:20100289/1‑35 (MQ=255) cGAAGGTGAAGACAAACCGCTGAAATATCCGCata > 1:6863341/1‑35 (MQ=255) cGAAGGTGAAGACAAACCGCTGAAATATCCGCata > 1:17797079/1‑35 (MQ=255) cGAAGGTGAAGACAAACCGCTGAAATATCCGCata > 1:8112332/1‑35 (MQ=255) cGAAGGTGAAGACAAACCGCTGAAATATCCGCata > 1:16817436/1‑35 (MQ=255) cGAAGGTGAAGACAAACCGCTGAAATATCCGCata > 1:10950149/1‑35 (MQ=255) gAAGGTGAAGACAAACCGCTGAAATATCCGCatat > 1:1516302/1‑35 (MQ=255) gAAGGTGAAGACAAACCGCTGAAATATCCGCatat > 1:1441865/1‑35 (MQ=255) gAAGGTGAAGACAAACCGCTGAAATATCCGCatat > 1:19744862/1‑35 (MQ=255) gAAGGTGAAGACAAACCGCTGAAATATCCGCatat > 1:7190843/1‑35 (MQ=255) gAAGGTGAAGACAAACCGCTGAAATATCCGCatat > 1:17984163/1‑35 (MQ=255) aaGGTGAAGACAAACCGCTGAAATATCCGCATATg > 1:15422858/1‑35 (MQ=255) aaGGTGAAGACAAACCGCTGAAATATCCGCATATg > 1:16076506/1‑35 (MQ=255) aaGGTGAAGACAAACCGCTGAAATATCCGCATATg > 1:14760684/1‑35 (MQ=255) aaGGTGAAGACAAACCGCTGAAATATCCGCATATg > 1:5444133/1‑35 (MQ=255) aaGGTGAAGACAAACCGCTGAAATATCCGCATATg > 1:7295662/1‑35 (MQ=255) aaGGTGAAGACAAACCGCTGAAATATCCGCATATg > 1:11685089/1‑35 (MQ=255) aaGGTGAAGACAAACCGCTGAAATATCCGCATATg > 1:9028683/1‑35 (MQ=255) aGGTGAAGACAAACCGCTGAAATATCCGCATATGt > 1:5781791/1‑35 (MQ=255) aGGTGAAGACAAACCGCTGAAATATCCGCATATGt > 1:12850988/1‑35 (MQ=255) gggaaaaaaaacccgctgaAATATCCGCATATGtt < 1:19852789‑M2/16‑1 (MQ=255) ggTGAAGACAAACCGCTGAAATATCCGCATATGtt > 1:5094094/1‑35 (MQ=255) ggTGAAGACAAACCGCTGAAATATCCGCATATGtt > 1:12604184/1‑35 (MQ=255) gataaaaaaaacccgctgaAATATCCGCATATGtt < 1:15676456‑M2/16‑1 (MQ=255) gtaaaGAAAAGCCGCTGAAATATCCGCATATGttt < 1:16225101/32‑1 (MQ=25) gaaaaaaaaaaccgctgaAATATCCGCATATGttt < 1:16724227‑M2/17‑1 (MQ=255) tGAAGACAAACCGCTGAAATATCCGCATNTGTTTn > 1:5033318/1‑35 (MQ=255) aaaagaaaacccgctgaAATATCCGCATATGTTTg < 1:923192‑M2/18‑1 (MQ=255) gAAGACAAACCGCTGAAATATCCGCATATGTTTgc > 1:17058334/1‑35 (MQ=255) gAAGACAAACCGCTGAAATATCCGCATATGTTTgc > 1:6324387/1‑35 (MQ=255) aaaaaaaccccgctgaAATATCCGCATATGTTTgc < 1:18978217‑M2/19‑1 (MQ=255) aaaaaaaacccgctgaAATATCCGCATATGTTTgc < 1:5658159‑M2/19‑1 (MQ=255) aaaGACAAACCGCTGAAATATCAGCATATGTTTgc < 1:17412460/34‑1 (MQ=255) aaaaaaacccgctgaAATATCCGCATATGTTTgcc < 1:12025664‑M2/20‑1 (MQ=255) aaaaaaacccgctgaAATATCCGCATATATTTgcc < 1:14404863‑M2/20‑1 (MQ=255) aaGACAAACCGCTTAAATATCCGCATATGTTTgcc > 1:17350274/1‑35 (MQ=255) aaGACAAACCGCTGAAATATCCGCATATGTTTgcc > 1:8319501/1‑35 (MQ=255) aaGACAAACCGCTGAAATATCCGCATATGTTTgcc > 1:1999743/1‑35 (MQ=255) aaaaaacccgctgaAATATCCGCATATGTTTgccg < 1:10609030‑M2/21‑1 (MQ=255) aGACATACCGCTGAAATATCCGCATATGTTTgccg < 1:2290718/35‑1 (MQ=255) aGACAAACCGCTGAAATATCCGCATATGTTTgccg > 1:20169751/1‑35 (MQ=255) aGACAAACCGCTGAAATATCCGCATATGTTTgccg > 1:1721460/1‑35 (MQ=255) gACAAACCGCTGAAATATCCGCATATGTTTgccgc > 1:15764925/1‑35 (MQ=255) gACAAACCGCTGAAATATCCGCATATGTTTgccgc > 1:4679014/1‑35 (MQ=255) aaaaacccgctgaAATATCCGCATATGTTTgccgc < 1:4296574‑M2/22‑1 (MQ=255) aCAAACCGCTGAAATATCCGCATATGTTTgccgcc > 1:2840141/1‑35 (MQ=255) aCAAACCGCTGAAATATCCGCATATGTTTgccgcc > 1:13942451/1‑35 (MQ=255) aCAAACCGCTGAAATATCCGCATATGTTTgccgcc > 1:16025001/1‑35 (MQ=255) aCAAACCGCTGAAATATCCGCATATGTTTgccgcc > 1:6222932/1‑35 (MQ=255) aCAAACCGCTGAAATATCCGCATATGTTTgccgcc > 1:689637/1‑35 (MQ=255) cAAACCGCTGAAATATCCGCATATGTTTgcagccg > 1:20437017/1‑35 (MQ=255) aaaCCGCTGAAATATCCGCATATGTTTgccgccgc > 1:1318087/1‑35 (MQ=255) aaaCCGCTGAAATATCCGCATATGTTTgccgccgc > 1:13713298/1‑35 (MQ=255) aaaCCGCTGAAATATCCGCATATGTTTgccgccgc > 1:4742717/1‑35 (MQ=255) aaCCGCTGAAATATCCGCATATGTTTgccgccgcc > 1:973835/1‑35 (MQ=255) cccgctgaAATATCCGCATATGTTTGCCGCCGCCt < 1:9633893‑M2/27‑1 (MQ=255) aCCGCTGAAATATCCGCATATGTTTGCCGCCGCCt > 1:3906769/1‑35 (MQ=255) aCCGCTGAAATATCCGCATATGTTTGCCGCCGCCt > 1:2987524/1‑35 (MQ=255) ccgttgaAATATCCGCATATGTTTGCCGCCGCCTc < 1:14931991‑M2/28‑1 (MQ=255) ccgctgaAATATCCGCATATGTTTGCCGCCGCCTc < 1:9463425‑M2/28‑1 (MQ=255) cgctgaAATATCCGCATATGTTTGCCGCCGCCTCg > 1:16343230‑M2/7‑35 (MQ=255) cgctgaAATATCCGCATATGTTTGCCGCCGCCTCg > 1:18658905‑M2/7‑35 (MQ=255) cgctgaAATATCCGCATATGTTTGCCGCCGCCTCg > 1:7177549‑M2/7‑35 (MQ=255) cgctgaAATATCCGCATATGTTTGCCGCCGCCTCg > 1:14003968‑M2/7‑35 (MQ=255) cgctgaAATATCCGCATATGTTTGCCGCCGCCTCg > 1:3225589‑M2/7‑35 (MQ=255) cgctaaAATATCCGCATATGTTTGCCGCCGCCTCg < 1:5835279‑M2/29‑1 (MQ=255) gctgaAATATCCGCATATGTTTGCCGCCGCCTCGc > 1:18837714‑M2/6‑35 (MQ=255) ctgaAATATCCGCATATGTTTGCCGCCGCCTCGCt > 1:8692796‑M2/5‑35 (MQ=255) ctgaAATATCCGCATATGTTTGCCGCCGCCTCGCt > 1:15307953‑M2/5‑35 (MQ=255) ctgaAATATCCGCATATGTTTGCCGCCGCCTCGCt > 1:19874877‑M2/5‑35 (MQ=255) tgaAATATCCGCATATGTTTGCCGCCGCCTCGCTg > 1:4141922‑M2/4‑35 (MQ=255) tgaAATATCCGCATATGTTTGCCGCCGCCTCGCTg < 1:3704577‑M2/32‑1 (MQ=255) tgaAATATCCGCATATGTTTGCCGCCGCCTCGCTg > 1:13581892‑M2/4‑35 (MQ=255) gaaAATATCCGCATATGTTTGCCGCCGCCTCGCTg < 1:13323487‑M2/32‑1 (MQ=255) gaAATATCCGCATATGTTTGCCGCCGCCTCGCTGa > 1:16910309‑M2/3‑35 (MQ=255) gaAATATCCGCATATGTTTGCCGCCGCCTCGCTGa > 1:4506377‑M2/3‑35 (MQ=255) gAAATATCCGCATATGTTTGCCGCCGCCCCGCCGa > 1:20367854/1‑35 (MQ=37) aaAATATCCGCATATGTTTGCCGCCGCCTCGCTGa < 1:13016532‑M2/33‑1 (MQ=255) aaAATATCCGCATATGTTTGCCGCCGCCTCGCTGa < 1:5423459‑M2/33‑1 (MQ=255) aaAATATCCGCATATGTTTGCAGCCGCCTCGCTGa < 1:11126324‑M2/33‑1 (MQ=255) aaAATACCCGCATATGTTTGCCGCCGCCTCGCTGa < 1:84256‑M2/33‑1 (MQ=255) aAATATCCGCATATGTTTGCCGCCGCCTCGCTGAt < 1:7118327‑M2/34‑1 (MQ=255) aAATATCCGCATATGTTTGCCGCCGCCTCGCTGAt > 1:13047306‑M2/2‑35 (MQ=255) aAATATCCGCATATGTTTGCCGCCGCCTCGCTGAt < 1:3808837‑M2/34‑1 (MQ=255) aAATATCCGCATATGTTTGCCGCCGCCTCGCTGAt > 1:18105474‑M2/2‑35 (MQ=255) aaTATCCGCATATGTTTGCCGCCGCCTCGCTGAtg > 1:12230575/1‑35 (MQ=255) aaTATCCGCATATGTTTGCCGCCGCCTCGCTGAtg > 1:8594419/1‑35 (MQ=255) aaTATCCGCATATGTTTGCCGCCGCCTCGCTGAtg > 1:4086037/1‑35 (MQ=255) | CTTTCCGTTACCGAAGGTGAAGACAAACCGCTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTGATG > REL606/2746497‑2746565 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |