Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 643,362 IS150 (+) +3 bp 43.3% coding (598‑600/954 nt) ybeF ← predicted DNA‑binding transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 643362 =62 (0.720)44 (0.450) 24/46 NT 38.2% coding (600/954 nt) ybeF predicted DNA‑binding transcriptional regulator
?REL606 = 666130 NA (NA)noncoding (1443/1443 nt) IS150 repeat region
* ? REL606 = 64336461 (0.710)50 (0.510) 29/46 NT 41.6% coding (598/954 nt) ybeF predicted DNA‑binding transcriptional regulator
?REL606 664688 = NA (NA)noncoding (1/1443 nt) IS150 repeat region

GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/643395‑643362
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTA  <  REL606/666130‑666102
                                                               
GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT                              >  1:20549111/1‑35
GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT                              <  1:17138412/35‑1
GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT                              <  1:2124092/35‑1
GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT                              <  1:20338635/35‑1
GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT                              >  1:11715149/1‑35
GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT                              >  1:14579988/1‑35
GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT                              <  1:13565407/35‑1
GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT                              >  1:1953474/1‑35
 GTGTTAATTTGCCGCGAGGGAAATCCACTACTCTG                             >  1:12733552/1‑35
  TGTTAATTTGCCGCGAGGGAAATCCACTACTCTGT                            <  1:1751497/35‑1
  TGTTAATTTGCCGCGAGGGAAATCCACTACTCTGT                            >  1:17851754/1‑35
  TGTTAATTGGCCGCGAGGGAAATCCACTACTCTGT                            <  1:19757912/35‑1
   GTTAATTTGCCGCGAGGGAAATCCACTACTCTGTA                           >  1:15258080/1‑35
   GTTAATTTGCCGCGAGGGAAATCCACTACTCTGTA                           <  1:8573594/35‑1
     TAATTTGCCGCGAGGGAAATCCACTACTCTGTACT                         <  1:16798967/35‑1
     TAATTTGCCGCGAGGGAAATCCACTACTCTGTACT                         <  1:168767/35‑1
      AATTTGCCGCGAGGGAAATCCACTACTCTGTACTG                        <  1:16227043/35‑1
      AATTTGCCGCGAGGGAAATCAACTACTCTGTACTG                        <  1:1038461/35‑1
       ATTTGCCGCGAGGGAAATCCACTACTCTGTACTGA                       <  1:12938122/35‑1
       ATTTGCCGCGAGGGAAATCCACTACTCTGTACTGA                       <  1:562410/35‑1
       ATTTGCCGCGAGGGAAATCCACTACTCTGTACTGA                       >  1:19749021/1‑35
         TTGCCGCGAGGGAAATCCACTACTCTGTACTGACC                     <  1:19706888/35‑1
           GCCGCGAGGGAAATCCACTACTCTGTACTGACCCC                   <  1:4798785/35‑1
           GCCGCGAGGGAAATCCACTACTCTGTACTGACCCC                   >  1:12427240/1‑35
           GCCGCGAGGGAAATCCACTACTCTGTACTGACCCC                   >  1:19832408/1‑35
           GCCGCGAGGGAAATCCACTACTCTGTACTGACCCC                   >  1:16137706/1‑35
            CCGCGAGGGAAATCCACTACTCTGTACTGACCCCA                  <  1:19132983/35‑1
            CCGCGAGGGAAATCCACTACTCTGTACTGACCCCA                  <  1:10455754/35‑1
             CGCGAGGGAAATCCACTACTCTGTACTGACCCCAA                 >  1:15620817/1‑35
             CGCGAGGGAAATCCACTACTCTGTACTGACCCCAA                 >  1:3934399/1‑35
              GCGAGGGAAATCCACTACTCTGTACTGACCCCAAA                <  1:2564026/35‑1
              GCGAGGGAAATCCACTACTCTGTACTGACCCCAAA                >  1:2773963/1‑35
              GCGAGGGAAATCCACTACTCTGTACTGACCCCAAA                >  1:13398308/1‑35
              GCGAGGGAAATCCACTACTCTGTACTGACCCCAAA                >  1:10831412/1‑35
                GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA              >  1:2779134/1‑35
                GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA              >  1:3750137/1‑35
                GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA              >  1:9993557/1‑35
                GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA              >  1:11712572/1‑35
                GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA              >  1:17148300/1‑35
                GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA              >  1:16257816/1‑35
                GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA              <  1:13882523/35‑1
                 AGGGAAATCCACTACTCTGTACTGACCCCAAAAAG             >  1:17311185/1‑35
                 AGGGAAATCCACTACTCTGTACTGACCCCAAAAAG             <  1:16872030/35‑1
                 AGGGAAATCCACTACTCTGTACTGACCCCAAAAAG             <  1:4857888/35‑1
                  GGGAAATCCACTACTCTGTACTGACCCCAAAAAGT            <  1:9219040/35‑1
                  GGGAAATCCACTACTCTGTACTGACCCCAAAAAGT            <  1:12659091/35‑1
                   GGAAATCCACTACTCTGTACTGACCCCAAAAAGTT           >  1:7205599/1‑35
                    GAAATCCACTACTCTGTACTGACCCCAAAAAGTTG          <  1:1006387/35‑1
                     AAATCCACTACTCTGTACTGACCCCAAAAAGTTGG         >  1:26730/1‑35
                      AATCCACTACTCTGTACTGACCCCAAAAAGTTGGA        <  1:15452338/35‑1
                      AATCCACTACTCTGTACTGACCCCAAAAAGTTGGA        <  1:13095015/35‑1
                      AATCCACTACTCTGTACTGACCCCAAAAAGTTGGA        >  1:1182254/1‑35
                        TCCACTACTCTGTACTGACCCCAAAAAGTTGGACA      <  1:18296137/35‑1
                          CACTACTCTGTACTGACCCCAAAAAGTTGGACAGT    <  1:15841366/35‑1
                           ACTACTCTGTACTGACCCCAAAAAGTTGGACAGTT   >  1:20321437/1‑35
                           ACTACTCTGTACTGACCCCAAAAAGTTGGACAGTT   >  1:887485/1‑35
                            CTACTCTGTACTGACCCCAAAAAGTTGGAGAGTTA  <  1:5495193/35‑1
                            CTACTCTGTACTGACCCCAAAAAGTTGGACAGTTA  <  1:2751877/35‑1
                            CTACTCTGTACTGACCCCAAAAAGTTGGACAGTTA  <  1:19101232/35‑1
                            CTACTCCGTACTGACCCCAAAAAGTTGGACAGTTA  <  1:7893964/35‑1
                                                               
GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/643395‑643362
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTA  <  REL606/666130‑666102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.