New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2283386 = | 61 (0.590) | 10 (0.110) | 3/44 | NT | 11.2% | intergenic (‑42/+107) | yfaA/gyrA | hypothetical protein/DNA gyrase subunit A |
? | REL606 | 2645822 = | 102 (1.080) | coding (151/273 nt) | yfiM | hypothetical protein |
Only 100 of 118 total aligned reads displayed.
TTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAG > REL606/2283352‑2283420 | ttCTTTTTGTATAGCCAGCCATTTTTTACGGGcac < 1:19912648/35‑1 (MQ=37) ttCTTTGTGTATAGCCAGCCATTTTTTACGGGcac < 1:1359139/35‑1 (MQ=255) ttCCTTGTGTATAGCCAGCCATTTTTTACGGGcac > 1:11883635/1‑35 (MQ=255) cggggcggctatcccaaagctcttttgacgccccc > 1:6395116‑M1/35‑35 (MQ=255) tCCTTGTGTATAGCCAGCCATTTTTTACGGGcaca > 1:15334203/1‑35 (MQ=255) ggggcggctatcccaaagctcttttgacgccccCa > 1:10501013‑M1/34‑35 (MQ=255) ccTTGTTTATAGCCAGCCATTTTTTACGGGCACAg < 1:10425888/35‑1 (MQ=255) ccTTGTGTATAGCCAGCCATTTTTTACGGGCACAg > 1:17329554/1‑35 (MQ=255) tttGTTTTTACCCAGCCATTTTTTACGGGCACAGc < 1:4721904/34‑1 (MQ=17) tttGTTTATAGCCAGCCATTTTTTACGGGCACAGc < 1:9239273/34‑1 (MQ=255) cTTGTGTATAGCCAGCCATTTTTTACGGGCACAGc > 1:16471330/1‑35 (MQ=255) ttGTGTATAGCCAGCCATTTTTTACGGGCACAGcc > 1:4394719/1‑35 (MQ=255) ttGTGTATAGCCAGCCATTTTTTACGGGCACAGcc > 1:9173674/1‑35 (MQ=255) tgtgTATAGCCAGCCATTTTTTACGGGCACAGCCa > 1:18235569/1‑35 (MQ=255) gtgtATAGCCAGCCATTTTTTACGGGCACAGCCaa > 1:14301288/1‑35 (MQ=255) gtgtATAGCCAGCCATTTTTTACGGGCACAGCCaa > 1:6294309/1‑35 (MQ=255) gtgtATAGCCAGCCATTTTTTACGGGCACAGCCaa > 1:15756849/1‑35 (MQ=255) tgtATAGCCAGCCATTTTTTACGGGCACAGCCaaa > 1:2729953/1‑35 (MQ=255) tgtATAGCCAGCCATTTTTTACGGGCACAGCCaaa > 1:4798575/1‑35 (MQ=255) gtATAGCCAGCCATTTTTTACGGGCACAGCCAAAc > 1:12260308/1‑35 (MQ=255) ataGCCAGCCATTTTTTACGGGCACAGCCAAACtt > 1:16936071/1‑35 (MQ=255) ataGCCAGCCATTTTTTACGGGCACAGCCAAACtt > 1:16899894/1‑35 (MQ=255) taGCCAGCCATTTTTTACGGGCACAGCCAAACttt > 1:17355093/1‑35 (MQ=255) taGCCAGCCATTTTTTACGGGCACAGCCAAACttt > 1:7628256/1‑35 (MQ=255) agccagccATTTTTTACGGGCACAGCCAAACTTTa > 1:2125380/1‑35 (MQ=255) agccagccATTTTTTACGGGCACAGCCAAACTTTa > 1:8457969/1‑35 (MQ=255) gccagccaTTTTTTACGGGCACAGCCAAACTTTAc > 1:20075944/1‑35 (MQ=255) gccagccaTTTTTTACGGGCACAGCCAAACTTTAc > 1:4212136/1‑35 (MQ=255) ccagccaTTTTTTACGGGCACAGCCAAACTTTAcc > 1:6741419/1‑35 (MQ=255) ccagccaTTTTTTACGGGCACAGCCAAACTTTAcc > 1:1898080/1‑35 (MQ=255) agccaTTTTTTACGGGCACAGCCAAACTTTACCGt > 1:6165953/1‑35 (MQ=255) agccaTTTTTTACGGGCACAGCCAAACTTTACCGt > 1:12981176/1‑35 (MQ=255) aaccaTTTTTTACGGGCACATACAAACTTTACCGt < 1:11580788/33‑1 (MQ=37) gccaTTTTTTACGGGCACAGCCAAACTTTACCGTg > 1:5879587/1‑35 (MQ=255) gccaTTTTTTACGGGCACAGCCAAACTTTACCGTg > 1:16441523/1‑35 (MQ=255) gccaTTTTTTACGGGCACAGCCAAACTTTACCGTg > 1:8352794/1‑35 (MQ=255) gccaTTTTTTACGGGCACAGCCAAACTTTACCGTg > 1:18271264/1‑35 (MQ=255) ccaTTTTTTACGGGCACAGCCAAACTTTACCGTGc > 1:2856782/1‑35 (MQ=255) ccaTTTTTTACGGGCACAGCCAAACTTTACCGTGc > 1:15238260/1‑35 (MQ=255) ccaTTTTTTACGGGCACAGCCAAACTTTACCGTGc > 1:14671046/1‑35 (MQ=255) caTTTTTTACGGGCACAGCCAAACTTTACCGTGcc > 1:8525722/1‑35 (MQ=255) caTTTTTTACGGGCACAGCCAAACTTTACCGTGcc > 1:12268312/1‑35 (MQ=255) caTTTTTTACGGGCACAGCCAAACTTTACCGTGcc > 1:18987985/1‑35 (MQ=255) ttttttcGCGGCCCCAGCCAAACTTTACCGTGccc < 1:6321054/34‑1 (MQ=19) ttttttcACGGCCCCAGCCAAACTTTACCGTGccc < 1:9369993/34‑1 (MQ=25) aTTTTTTACGGGCACAGCCAAACTTTACCGTGccc > 1:7908233/1‑35 (MQ=255) aTTTTTTACGGGCACAGCCAAACTTTACCGTGccc > 1:11873961/1‑35 (MQ=255) aTTTTTTACGGGCACAGCCAAACTTTACCGTGccc > 1:10155485/1‑35 (MQ=255) ttttttACGGGCACAGCCAAACTTTACCGTGCCCt > 1:3940811/1‑35 (MQ=255) ttttttACGGGCACAGCCAAACTTTACCGTGCCCt > 1:9381937/1‑35 (MQ=255) tttttCCGGCCCCAGCCAAACTTTACCGTGCCCTa < 1:3457234/35‑1 (MQ=25) tttttCCGGCCCCAGCCAAACTTTACCGTGCCCTa < 1:15132110/35‑1 (MQ=25) tttttACGGGCACAGCCAAACTTTACCGCGCCCTa > 1:1323577/1‑35 (MQ=255) tttttACGGGCACAGCCAAACCTTACCGTGCCCTa > 1:4220616/1‑35 (MQ=255) ttttCCGGCCCCAGCCAAACTTTACCGTGCCCTaa < 1:1378078/35‑1 (MQ=25) ttttACGGGCACAGCCAAACTTTACCGTGCCCTaa > 1:18369717/1‑35 (MQ=255) tttgacgccccCAGCCAAACTTTACCGTGCCCTaa > 1:5977588‑M1/12‑35 (MQ=255) tttCCGGCCCCAGCCAAACTTTACCGTGCCCTAAt < 1:16216850/35‑1 (MQ=25) tttCCGGCCCCAGCCAAACTTTACCGTGCCCTAAt < 1:10924462/35‑1 (MQ=25) tttCCGGCCCCAGCCAAACTTTACCGTGCCCTAAt < 1:15876748/35‑1 (MQ=25) tttACGGGCACAGCCAAACTTTACCGTGCCCTAAt > 1:5362430/1‑35 (MQ=255) tttACGGGCACAGCCAAACTTTACCGTGCCCTAAt > 1:16344401/1‑35 (MQ=255) ttACGGGCACAGCCAAACTTTACCGTGCCCTAATa > 1:17517688/1‑35 (MQ=255) tcccgccccCAGCCAAACTTTACCGTGCCCTAATa > 1:14416748‑M1/10‑35 (MQ=255) tACGGGCCCAGCCAAACTTTACCGTGCCCTAATAc < 1:20131534/35‑1 (MQ=255) tACGGGCACAGCCAAACCTTACCGTGCCCTAATAc > 1:2693405/1‑35 (MQ=255) cccgccccCAGCCAAACTTTACCGTGCCCTAATAc > 1:8839604‑M1/9‑35 (MQ=255) ccggcccCAGCCAAACTTTACCGTGCCCTAATACg > 1:5725753‑M1/8‑35 (MQ=255) ccgccccCAGCCAAACTTTACCGTGCCCTAATACg > 1:18772611‑M1/8‑35 (MQ=255) aCGGGCACAGCCAAACTTTACCGTGCCCTAATACg > 1:662538/1‑35 (MQ=255) gggcccCAGCCAAACTTTACCGTGCCCTAATACGa > 1:1656956‑M1/7‑35 (MQ=255) gcgcccCAGCCAAACTTTACCGTGCCCTAATACGa > 1:17847047‑M1/7‑35 (MQ=255) cggcccCAGCCAAACTTTACCGTGCCCTAATACGa > 1:1053734‑M1/7‑35 (MQ=255) cggcccCAGCCAAACTTTACCGTGCCCTAATACGa > 1:10468763‑M1/7‑35 (MQ=255) cgccccCAGCCAAACTTTACCGTGCCCTAATACGa > 1:17086886‑M1/7‑35 (MQ=255) cGGGCACAGCCAAACTTTACCGTGCCCTAATACGa > 1:20104024/1‑35 (MQ=255) cGGGCACAGCCAAACTTTACCGTGCCCTAATACGa > 1:752827/1‑35 (MQ=255) gggCACAGCCAAACTTTACCGTGCCCTAATACGAc > 1:20350501/1‑35 (MQ=255) cgcccCAGCCAAACTTTACCGTGCCCTAATACGAc > 1:8655983‑M1/6‑35 (MQ=255) ggCACAGCCAAACTTTACCGTGCCCTAATACGACa > 1:18797945/1‑35 (MQ=255) ggCACAGCAAAACTTTACCGTGCCCTAATACGACa < 1:11958378/35‑1 (MQ=255) gCACAGCCAAACTTTACCGTGCCCTAATACGACaa > 1:9329045/1‑35 (MQ=255) gCACAGCCAAACTTTACCGTGCCCTAATACGACaa > 1:17514328/1‑35 (MQ=255) gCACAGCCAAACTTTACCGTGCCCTAATACGACaa > 1:16631555/1‑35 (MQ=255) cccCAGCCAAACTTTACCGTGCCCTAATACGACaa > 1:16613256‑M1/4‑35 (MQ=255) ccacaGCCAAACTTTACCGTGCCCTAATACGACaa < 1:8835966/34‑1 (MQ=255) ccCAGCCAAACTTTACCGTGCCCTAATACGACaaa > 1:14269404‑M1/3‑35 (MQ=255) ccCAGCCAAACTTTACCGTGCCCTAATACGACaaa > 1:12732516‑M1/3‑35 (MQ=255) cacaGCCAAACTTTACCGTGCCCTAATACGACaaa > 1:15292500/1‑35 (MQ=255) cacaGCCAAACTTTACCGTGCCCTAATACGACaaa > 1:6389958/1‑35 (MQ=255) cacaGCCAAACTTTACCGTGCCCTAATACGACaaa > 1:14364479/1‑35 (MQ=255) acaGCCAAACTTTACCGTGCCCTAATACGACaaaa > 1:19151486/1‑35 (MQ=255) acaGCCAAACTTTACCGTGCCCTAATACGACaaaa > 1:17961300/1‑35 (MQ=255) acaGCCAAACTTTACCGTGCCCTAATACGACaaaa > 1:12711433/1‑35 (MQ=255) acaGCCAAACTTTACCGTGCCCTAATACGACaaaa > 1:14135917/1‑35 (MQ=255) acaGCCAAACTTTACCGTGCCCTAATACGACaaaa > 1:564539/1‑35 (MQ=255) CAGCCAAACTTTACCGTGCCCTAATACGACAAAAg > 1:19304921‑M1/1‑35 (MQ=255) CAGCCAAACTTTACCGTGCCCTAATACGACAAAAg > 1:19619160‑M1/1‑35 (MQ=255) CAGCCAAACTTTACCGTGCCCTAATACGACAAAAg > 1:17295892‑M1/1‑35 (MQ=255) CAGCCAAACTTTACCGTGCCCTAATACGACAAAAg < 1:5344304‑M1/35‑1 (MQ=255) | TTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAG > REL606/2283352‑2283420 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |