Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 3,454,489 IS150 (+) +4 bp 38.1% coding (342‑345/561 nt) yrfE ← ADP‑ribose diphosphatase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 3454489 =74 (0.860)46 (0.450) 30/48 NT 34.1% coding (345/561 nt) yrfE ADP‑ribose diphosphatase
?REL606 = 3652533 NA (NA)noncoding (1443/1443 nt) IS150 repeat region
* ? REL606 = 345449274 (0.860)45 (0.440) 28/48 NT 33.6% coding (342/561 nt) yrfE ADP‑ribose diphosphatase
?REL606 3651091 = NA (NA)noncoding (1/1443 nt) IS150 repeat region

GAACGATCTGACTTTTTTGAAGAAGCTCAGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3454522‑3454489
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAA  <  REL606/3652533‑3652504
                                                                
GAACGATCTGACTTTTTTGAAGAAGCTCAGCATGT                               >  1:1003681/1‑35
GAACGATCTGACTTTTTTGAAGAAGCTCAGCATGT                               <  1:120920/35‑1
 AACGATCTGACTTTTTTGAAGAAGCTCAGCATGTG                              <  1:11751544/35‑1
 AACGATCTGACTTTTTTGAAGAAGCTCAGCATGTG                              <  1:16455265/35‑1
 AACGATCTGACTTTTTTGAAGAAGCTCAGCATGTG                              >  1:15555021/1‑35
  ACGATCTGACTTTTTTGAAGAAGCTCAGCATGTGT                             <  1:5403234/35‑1
    GATCTGACTTTTTTGAAGAAGCTCAGCATGTGTAC                           >  1:8924311/1‑35
    GATCTGACTTTTTTGAAGAAGCTCAGCATGTGTAC                           >  1:6469461/1‑35
    GATCTGACTTTTTTGAAGAAGCTCAGCATGTGTAC                           <  1:20486435/35‑1
    GATCTGACTTTTTTGAAGAAGCTCAGCATGTGTAC                           <  1:13232662/35‑1
     ATCTGACTTTTTTGAAGAAGCTCAGCATGTGTACT                          >  1:11142464/1‑35
     ATCTGACTTTTTTGAAGAAGCTCAGCATGTGTACT                          >  1:19131341/1‑35
       CTGACTTTTTTGAAGAAGCTAAGCATGTGTACTGA                        <  1:13779263/35‑1
        TGACTTTTTTGAAGAAGCTCAGCATGTGTACTGAC                       <  1:3374126/35‑1
        TGACTTTTTTGAAGAAGCTCAGCATGTGTACTGAC                       >  1:18499596/1‑35
        TGACTTTTTTGAAGAAGCTCAGCATGTGTACTGAC                       <  1:13913557/35‑1
         GACTTTTTTGAAGAAGCTCAGCATGTGTACTGACC                      >  1:3151671/1‑35
         GACTTTTTTGAAGAAGCTCAGCATGTGTACTGACC                      <  1:15868853/35‑1
          ACTTTTTTGAAGAAGCTCAGCATGTGTACTGACCC                     <  1:4288544/35‑1
           CTTTTTTGAAGAAGCTCAGCATGTGTACTGACCCC                    >  1:10780739/1‑35
           CTTTTTTGAAGAAGCTCAGCATGTGTACTGACCCC                    >  1:15885676/1‑35
            TTTTTTGAAGAAGCTCAGCATGTGTACTGACCCCA                   <  1:20188610/35‑1
              TTTTGAAGAAGCTCAGCATGTGTACTGACCCCAAA                 <  1:11254879/35‑1
               TTTGAAGAAGCTCAGCATGTGTACTGACCCCAAAA                <  1:8760766/35‑1
               TTTGAAGAAGCTCAGCATGTGTACTGACCCCAAAA                >  1:18812030/1‑35
                TTGAAGAAGCTCAGCATGTGTACTGACCCCAAAAA               <  1:2977526/35‑1
                 TGAAGAAGCTCAGCATGTGTACTGACCCCAAAAAG              <  1:2934403/35‑1
                 TGAAGAAGCTCAGCATGTGTACTGACCCCAAAAAG              >  1:8524272/1‑35
                  GAAGAATCTCAGCATGTGTACTGACCCCAAAAAGT             >  1:7860611/1‑35
                  GAAGAAGCTCAGCATGTGTACTGACCCCAAAAAGT             <  1:17938629/35‑1
                  GAAGAAGCTCAGCATGTGTACTGACCCCAAAAAGT             >  1:12549422/1‑35
                  GAAGAAGCTCAGCATGTGTACTGACCCCAAAAAGT             >  1:20398390/1‑35
                  GAAGAAGCTCAGCATGTGTACTGACCCCAAAAAGT             <  1:243477/35‑1
                   AAGAAGCTCAGCATGTGTACTGACCCCAAAAAGTT            <  1:13132799/35‑1
                   AAGAAGCTCAGCATGTGTACTGACCCCAAAAAGTT            <  1:17079935/35‑1
                   AAGAAGCTCAGCATGTGTACTGACCCCAAAAAGTT            >  1:8506691/1‑35
                    AGAAGCTCAGCATGTGTACTGACCCCAAAAAGTTG           <  1:16934355/35‑1
                    AGAAGCTCAGCATGTGTACTGACCCCAAAAAGTTG           <  1:3820963/35‑1
                     GAAGCTCAGCATGTGTACTGACCCCAAAAAGTTGG          >  1:15807699/1‑35
                      AAGCTCAGCATGTGTACTGACCCCAAAAAGTTGGA         >  1:4345026/1‑35
                       AGCTCAGCATGTGTACTGACCCCAAAAAGTTGGAC        <  1:807647/35‑1
                       AGCTCAGCATGTGTACTGACCCCAAAAAGTTGGAC        <  1:14884722/35‑1
                       AGCTCAGCATGTGTACTGACCCCAAAAAGTTGGAC        >  1:14588141/1‑35
                       AGCTCAGCATGTGTACTGACCCCAAAAAGTTGGAC        <  1:8052148/35‑1
                        GCTCAGCATGTGTACTGACCCAAAAAAGTTGGACA       <  1:3076454/35‑1
                        GCTCAGCATGTGTACTGACCCAAAAAAGTTGGACA       <  1:6829751/35‑1
                         CTCAGCATGTGTACTGACCCCAAAAAGTTGGACAG      >  1:18315718/1‑35
                          TCAGCATGTGTACTGACCCCAAAAAGTTGGACAGT     >  1:567302/1‑35
                          TCAGCATGTGTACTGACCCCAAAAAGTTGGACAGT     >  1:20241455/1‑35
                           CAGCATGTGTACTGACCCCAAAAAGTTGGACAGTT    >  1:11949655/1‑35
                           CAGCATGTGTACTGACCCCAAAAAGTTGGACAGTT    >  1:16557741/1‑35
                            cGCATTTGTACTGACCCCAAAAAGTTGGACAGTTA   <  1:18422534/34‑1
                            AGCATGTGTACTGGCCCCAAAAAGTTGGACAGTTA   <  1:6494667/35‑1
                            AGCATGTGTACTGACCCCAAAAAGTTGGACAGTTA   >  1:9392618/1‑35
                            AGCATGTGTACTGACCCCAAAAAGTTGGACAGTTA   >  1:11384628/1‑35
                            AGCATGTGTACTGACCCCAAAAAGTTGGACAGTTA   <  1:12167302/35‑1
                            AGCATGTGTACTGACCCCAAAAAGTTGGACAGTTA   >  1:15881516/1‑35
                             gaATGTGTACTGACCCCAAAAAGTTGGACAGTTAA  >  1:6813743/3‑35
                             cgtTGTGTACTGACCCCAAAAAGTTGGACAGTTAA  <  1:16084929/32‑1
                             GCATGTGTACTGACCCCAAAAAGTTGGACAGTTAA  >  1:20284626/1‑35
                             GCATGTGTACTGACCCCAAAAAGTTGGACAGTTAA  <  1:14701120/35‑1
                                                                
GAACGATCTGACTTTTTTGAAGAAGCTCAGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3454522‑3454489
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAA  <  REL606/3652533‑3652504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.