New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2789283 | 65 (0.630) | 8 (0.080) | 4/46 | NT | 11.2% | coding (192/1278 nt) | yqcE | predicted transporter |
? | REL606 | 3161174 = | 67 (0.650) | coding (557/1071 nt) | ygjJ | hypothetical protein |
Only 100 of 117 total aligned reads displayed.
CCTTTGGTATTGCGGCCATTATTCTTTATGCCCCCAGCGGCGTTATTGCCGATAAATTTTCACACCGCA > REL606/2789249‑2789317 | ccTTTGGTATTGCGGCCATTATTCTTTATGccccc < 1:4890412/35‑1 (MQ=255) ccTTTGGTATTGCGGCCATTATTCTTTATAccccc < 1:4803748/35‑1 (MQ=255) cTTTGGTATTGCGGCCATTATTTTTTATGCCCCCa > 1:11249136/1‑35 (MQ=255) cTTTGGTATTGCGGCCATTATTCTTTATGCCCCCa < 1:12121834/35‑1 (MQ=255) tttGGTATTGCGGCCATTATTCTTTATGCCCCCAg < 1:3278205/35‑1 (MQ=255) tttGGTATTGCGGCCATTATTCTTTATGCCCCCAg < 1:290384/35‑1 (MQ=255) tttGGTATTGCGGCCATTATTCTTTATGCCCCCAg < 1:15546900/35‑1 (MQ=255) ttGGTATTGCGGCCATTATTCTTTATGCCCCCAgc < 1:17078018/35‑1 (MQ=255) ttGGTATTGCGGCCATTATTCTTTATGCCCCCAgc < 1:2351771/35‑1 (MQ=255) ggTATGGCGGCCATTATTCTTTATGCCCCCAgcgg < 1:351247/35‑1 (MQ=255) ggaTTGCGGCCATTATTCTTTATGCCCCCAgcggc < 1:1590188/33‑1 (MQ=255) tATTGCGGCCATTATTCTTTATGCCCCCAgcggcg < 1:5356072/35‑1 (MQ=255) aTTGCGGCCATTATTCTTTATGCCCCCAGCGGCGt < 1:5268186/35‑1 (MQ=255) ttGCGGCCATTATTCTTTATGCCCCCAGCGGCGtt < 1:15046332/35‑1 (MQ=255) tGCGGCCATTATTCTTTATGCCCCCAGCGGCGTTa < 1:13757421/35‑1 (MQ=255) gCGGCCATTATTCTTTATGCCACCAGCGGCGTTAt < 1:9599313/35‑1 (MQ=255) cGGCCATTATTCTTTATGCCCCCAGCGGCGTTAtt < 1:10697180/35‑1 (MQ=255) ggCCATTATTCTTTATGCCCCCAGCGGCGTTATTg > 1:17483211/1‑35 (MQ=255) ggCCATTATTCTTTATGCCCCCAGCGGCGTTATTg > 1:13259273/1‑35 (MQ=255) ggCCATTATTCTTTATGCCCCCAGCGGCGTTATTg < 1:19954157/35‑1 (MQ=255) gCCATTATTCTTTATGCCCCCAGCGGCGTTATTGc > 1:15227184/1‑35 (MQ=255) ccATTATTCTTTATGCCCCCAGCGGCGTTATTGcc < 1:1351720/35‑1 (MQ=255) ccATTATTCTTTATGCCCCCAGCGGCGTTATTGcc > 1:16546700/1‑35 (MQ=255) ccATTATTCTTTATGCCCCCAGCGGCGTTATTGcc < 1:4029759/35‑1 (MQ=255) cATTATTCTTTATGCCCCCAGCGGAGTTATTGCCg < 1:11834924/35‑1 (MQ=255) cATTATTCTTTATGCCCCCAGCGGAGTTATTGCCg < 1:14156407/35‑1 (MQ=255) attattCTTTATGCCCCCAGCGGCGTTATTGCCGa > 1:7554191/1‑35 (MQ=255) attattCTTTATGCCCCCAGCGGCGTTATTGCCGa > 1:272945/1‑35 (MQ=255) ttattCTTTATGCCCCCAGCGGCGTTATTGCCGAt < 1:12815815/35‑1 (MQ=255) ttattCTTTATGCCCCCAGCGGCGTTATTGCCGAt > 1:18233310/1‑35 (MQ=255) tattCTTTATGCCCCCAGCGGCGTTATTGCCGATa > 1:1518185/1‑35 (MQ=255) tattCTTTATGCCCCCAGCGGCGTTATTGCCGATa < 1:6467861/35‑1 (MQ=255) tattCTTTATGCCCCCAGCGGCGTTATTGCCGATa > 1:9643448/1‑35 (MQ=255) attCTTTATGCCCCCAGCGGCGTTATTGCCGATaa < 1:15535052/35‑1 (MQ=255) ttCTTTATGCCCCCcccgcgactcctgccggacat < 1:6737546‑M1/35‑22 (MQ=255) ttCTTTATGCCCCCAGCGGCGTTATTGCCGATaaa < 1:10059518/35‑1 (MQ=255) ttCTTTATGCCCCCAGCGGCGTTATTGCCGATaaa < 1:17311819/35‑1 (MQ=255) ttCTTTATGCCCCCAGCGGCGTTATTGCCGATaaa > 1:338980/1‑35 (MQ=255) ttCTTTATGCCCCCAGCGGCGTTATTGCCGATaaa < 1:12458702/35‑1 (MQ=255) ttCTTTATGCCCCCAGCGGCGTTATTGCCGATaaa < 1:11769446/35‑1 (MQ=255) tCTTTATGCCCCCAGCGGCGTTATTGCCGATAAAt < 1:17496553/35‑1 (MQ=255) cTTTATGCCCCCAGCGGCGTTATTGCCGATAAAtt < 1:17016241/35‑1 (MQ=255) cTTTATGCCCCCAGCGGCGTTATTGCCGATAAAtt > 1:1660465/1‑35 (MQ=255) cTTTATGCCCCCAGCGGCGTTATTGCCGATAAAtt > 1:13418688/1‑35 (MQ=255) tttATGCCCCCAGCGGCGTTATTGCCGATAAAttt > 1:12672003/1‑35 (MQ=255) tttATGCCCCCAGCGGCGTTATTGCCGATAAAttt < 1:18982827/35‑1 (MQ=255) ttATGCCCCCAGCGGCGTTATTGCCGATAAAtttt > 1:8641825/1‑35 (MQ=255) ttATGCCCCCAGCGGCGTTATTGCCGATAAAtttt > 1:1058734/1‑35 (MQ=255) ttATGCCCCCAGCGGCGTTATTGCCGATAAAtttt > 1:3373350/1‑35 (MQ=255) ttATCCCCCCcccgcgactcctgccggacatcatg < 1:13670509‑M1/35‑26 (MQ=255) ttAAGCCCCCcccgcgactcctgccggacatcatg < 1:5515565‑M1/35‑26 (MQ=255) tATGCCCCCAGCGGCGTTATTGCCGATAAATTTTc > 1:2160004/1‑35 (MQ=255) tATGCCCCCAGCGGCGTTATTGCCGATAAATTTTc > 1:6727885/1‑35 (MQ=255) tATGCCCCCAGCGGCGTTATTGCCGATAAATTTTc < 1:12373771/35‑1 (MQ=255) tATGCCCCCAGCGGCGTTATTGCCGATAAATTTTc < 1:8011618/35‑1 (MQ=255) cacccccccccgcgactcctgccggacatcatgat < 1:20557883‑M1/32‑28 (MQ=255) ataccccccccgcgactcctgccggacatcatgat < 1:4630988‑M1/32‑28 (MQ=255) aggccCCCcccgcgactcctgccggacatcatgat < 1:11410107‑M1/33‑28 (MQ=255) aTGCCCCCAGCGGCGTTATTGCCGATAAATTTTca > 1:14737560/1‑35 (MQ=255) aTGCCCCCAGCGGCGTTATTGCCGATAAATTTTca < 1:10408340/35‑1 (MQ=255) tcgcccccccgcgactcctgccggacatcatgatg < 1:1979009‑M1/32‑29 (MQ=255) tGCCGCCcccgcgactcctgccggacatcatgatg < 1:17579034‑M1/35‑29 (MQ=255) tGCCCCCAGCGGCGTTATTGCCGATAAATTTTcac < 1:14510866/35‑1 (MQ=255) tGCCCCCAGCGGCGTTATTGCCGATAAATTTTcac < 1:17051655/35‑1 (MQ=255) tGCCCCCAGCGGCGTTATTGCCGATAAATTTTcac < 1:17252585/35‑1 (MQ=255) ggcCCCCcccgcgactcctgccggacatcatgatg < 1:5549364‑M1/34‑29 (MQ=255) gaccccccccgcgactcctgccggacatcatgatg < 1:615801‑M1/33‑29 (MQ=255) agcCCCCcccgcgactcctgccggacatcatgatg < 1:14343630‑M1/34‑29 (MQ=255) gCCCCCAGCGGCGTTATTGCCGATAAATTTTcaca > 1:14482321/1‑35 (MQ=255) gCCCCCAGCGGCGTTATTGCCGATAAATTTTcaca < 1:3704295/35‑1 (MQ=255) gCCCCCAGCGGCGTTATTGCCGATAAATTTTcaca > 1:20175894/1‑35 (MQ=255) gCCCCCAGCGGCGTTATTGCCGATAAATTTTcaca > 1:19834092/1‑35 (MQ=255) cccccccccgcgactcctgccggacatcatgatga < 1:14643040‑M1/34‑30 (MQ=255) gcccccccgcgactcctgccggacatcatgatgaa < 1:11617578‑M1/34‑31 (MQ=255) cccccAGCGGCGTTATTGCCGATAAATTTTCacac < 1:6697786/35‑1 (MQ=255) cccccAGCGGCGTTATTGCCGATAAATTTTCacac < 1:3157964/35‑1 (MQ=255) cccccAGCGGCGTTATTGCCGATAAATTTTCacac < 1:15082851/35‑1 (MQ=255) cccccAGCGGCGTTATTGCCGATAAATTTTCacac > 1:15853365/1‑35 (MQ=255) cccccAGCGGCGTTATTGCCGATAAATTTTCacac > 1:1037659/1‑35 (MQ=255) cccccccgcgactcctgccggacatcatgatgaaa < 1:3216391‑M1/35‑32 (MQ=255) cccccccgcgactcctgccggacatcatgatgaaa < 1:13754472‑M1/35‑32 (MQ=255) cccccccgcgactactgccggacatcatgatgaaa < 1:6008348‑M1/35‑32 (MQ=255) ccccAGCGGCGTTATTGCCGATAAATTTTCACAcc > 1:11561508/1‑35 (MQ=255) ccccAGCGGCGTTATTGCCGATAAATTTTCACAcc < 1:5150374/35‑1 (MQ=255) ccccAGCGGCGTTATTGCCGATAAATTTTCACAcc > 1:9038566/1‑35 (MQ=255) gcccccgcgactcctgccggacatcatgatgaaag < 1:5680410‑M1/34‑33 (MQ=255) cccAGCGGCGTTATTTCCGATAAATTTTCACACCg > 1:2678075/1‑35 (MQ=255) cccAGCGGCGTTATTGCCGATAAATTTTCACACCg < 1:9262467/35‑1 (MQ=255) cccAGCGGCGTTATTGCCGATAAATTTTCACACCg > 1:13009374/1‑35 (MQ=255) cccAGCGGCGTTATTGCCGATAAATTTTCACACCg < 1:9773571/35‑1 (MQ=255) cccAGCGGCGTTATTGCCGATAAATTTTCACACCg < 1:14427490/35‑1 (MQ=255) cccAGCGGCGTTATTGCCGATAAATTTTCACACCg < 1:599344/35‑1 (MQ=255) accAGCGGCGTTATTGCCGATAAATTTTGACACCg < 1:17133990/34‑1 (MQ=255) tcAGCGGCGTTATTGCCGATAAATTTTCACACCGc > 1:15144852/2‑35 (MQ=255) cccccgcgactcctgccggacatcatgatgaaagc < 1:3766337‑M1/35‑34 (MQ=255) ccAGCGGCGTTATTGCCGATAAATTTTCACACCGc > 1:7423760/1‑35 (MQ=255) ccccgcgactcctgccggacatcatgatgaaagca < 1:10811081‑M1/35‑35 (MQ=255) ccccgcgactcctgccggacatcatgatgaaagca < 1:17648253‑M1/35‑35 (MQ=255) cAGCGGCGTTATTGCCGATAAATTTTCACACCGCa > 1:19985343/1‑35 (MQ=255) cAGCGGCGTTATTGCCGATAAATTTTCACACCGCa < 1:4694260/35‑1 (MQ=255) | CCTTTGGTATTGCGGCCATTATTCTTTATGCCCCCAGCGGCGTTATTGCCGATAAATTTTCACACCGCA > REL606/2789249‑2789317 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |