Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 4,110,237 IS150 (–) +3 bp 100% coding (296‑298/2433 nt) metL → bifunctional aspartate kinase II/homoserine dehydrogenase II

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 3893554 =NA (NA)139 (1.480) 43/44 NT 100% noncoding (1/1443 nt) IS150 repeat region
?REL606 4110237 = 0 (0.000)coding (296/2433 nt) metL bifunctional aspartate kinase II/homoserine dehydrogenase II
* ? REL606 = 3894996NA (NA)79 (0.770) 28/48 NT 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 = 4110239 0 (0.000)coding (298/2433 nt) metL bifunctional aspartate kinase II/homoserine dehydrogenase II

Only 100 of 403 total aligned reads displayed.

TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3893589‑3893554
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caTTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGC  >  REL606/4110237‑4110270
                                                                      
TTCCATTTCATCGTCCAACAAAATNGGTGCAGTAC                                     >  1:6003645/1‑35
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     >  1:17180071/1‑35
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     <  1:9370278/35‑1
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     >  1:5734382/1‑35
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     <  1:6477318/35‑1
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     <  1:281989/35‑1
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     >  1:2459387/1‑35
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     <  1:5176059/35‑1
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     >  1:721159/1‑35
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     >  1:7331194/1‑35
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     >  1:2326265/1‑35
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     >  1:7535587/1‑35
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     <  1:14948585/35‑1
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     >  1:4912/1‑35
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     >  1:20115656/1‑35
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     <  1:3805691/35‑1
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     <  1:10902917/35‑1
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     <  1:4160628/35‑1
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     <  1:15967924/35‑1
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     <  1:8424634/35‑1
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     >  1:10292550/1‑35
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC                                     >  1:10124118/1‑35
 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA                                    <  1:15675242/35‑1
 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA                                    <  1:4413688/35‑1
 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA                                    <  1:14290180/35‑1
 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA                                    >  1:1773401/1‑35
 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA                                    >  1:1807103/1‑35
 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA                                    <  1:110106/35‑1
 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA                                    >  1:1846910/1‑35
 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA                                    <  1:19792484/35‑1
 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA                                    >  1:9496800/1‑35
 TCCATTTCATCGTCCAAAAAAATGGGTGCAGTACA                                    <  1:11425218/35‑1
  CCATTTCATCGTCCAACAAAATGGGTGCAGTACAc                                   <  1:3440137/35‑2
  CCATTTCATCGTCCAACAAAATGGGTGCAGTACAc                                   <  1:1895383/35‑2
  CCATTTCATCGTCCAACAAAATGGGTGCAGTACAc                                   <  1:4624335/35‑2
  CCATTTCATCGTCCAACAAAATGGGTGCAGTACAc                                   >  1:10811009/1‑34
  CCATTTCATCGTCCAACAAAATGGGTGCAGTACAT                                   >  1:4810149/1‑35
  CCATTTCATCGTCCAACAAAATGGGTGCAGTACAT                                   <  1:14051714/35‑1
  CCATTTCATCGTCCAACAAAATGGGTGCAGTACAT                                   >  1:6937000/1‑35
  CCATTTCATCGTCCAACAAAATGGGTGCAGTACAT                                   >  1:11878829/1‑35
  CCATTTCATCGTCCAACAAAATGGGTGCAGTACAT                                   >  1:11287465/1‑35
   CATTTCATCGTCCAACAAAATGGGTGCAGTACAct                                  <  1:15148676/35‑3
   CATTTCATCGTCCAACAAAATGGGTGCAGTACAct                                  <  1:6705813/35‑3
   CATTTCATCGTCCAACAAAATGGGTGCAGTACAct                                  >  1:12753785/1‑33
   CATTTCATCGTCCAACAAAATGGGTGCAGTACAcc                                  >  1:3516709/1‑33
   CATTTCATCGTCCAACAAAATGGGTGCAGTACAcc                                  <  1:14477234/35‑3
   CATTTCATCGTCCAACAAAATGGGTGCAGTACAcc                                  >  1:7905234/1‑33
    ATTTCATCGTCCAACAAAATGGGTGCAGTACActt                                 <  1:766926/35‑4
    ATTTCATCGTCCAACAAAATGGGTGCAGTACActc                                 <  1:8480363/35‑4
    ATTTCATCGTCCAACAAAATGGGTGCAGTACAccg                                 >  1:12922105/1‑32
    ATTTCATCGTCCAACAAAATGGGTGCAGTACAccg                                 <  1:11568489/35‑4
    ATTTCATCGTCCAACAAAATGGGTGCAGTACATTA                                 >  1:3268994/1‑35
      TTCATCGTCCAACAAAATGGGTGCAGTACATTAGC                               >  1:14588868/1‑35
      TTCATCGTCCAACAAAATGGGTGCAGTACATTAGC                               >  1:10423634/1‑35
      TTCATCGTCCAACAAAATGGGTGCAGTACATTAGC                               <  1:19901986/35‑1
      TTCATCGTCCAACAAAATGGGTGCAGTACACTAGa                               >  1:13266848/1‑34
       TCATCGTCCAACAAAATGGGTGCAGTACATTAGCG                              <  1:12446919/35‑1
       TCATCGTCCAACAAAATGGGTGCAGTACATTAGCG                              <  1:17104511/35‑1
        CATCGTCCAACAAAATGGGTGCAGTACATTAGCGC                             >  1:6420449/1‑35
        CATCGTCCAACAAAATGGGTGCAGTACATTAGCGC                             <  1:20240115/35‑1
         ATCGTCCAACAAAATGGGTGCAGTACATTAGCGCT                            <  1:12248645/35‑1
            GTCCAACAAAATGGGTGCAGTACATTAGCGCTTTT                         <  1:9201143/35‑1
            GTCCAACAAAATGGGTGCAGTACATTAGCGCTTTT                         <  1:17011524/35‑1
            GTCCAACAAAATGGGTGCAGTACATTAGCGCTTTT                         >  1:16256735/1‑35
             TCCAACAAAATGGGTGCAGTACATTAGCGCTTTTG                        >  1:17520121/1‑35
             TCCAACAAAATGGGTGCAGTACATTAGCGCTTTTG                        <  1:2257161/35‑1
              CCAACAAAATGGGTGCAGTACATTAGCGCTTTTGT                       <  1:11780185/35‑1
               CAACAAAATGGGTGCAGTACATTAGCGCTTTTGTC                      >  1:2973662/1‑35
               CAACAAAATGGGTGCAGTACATTAGCGCTTTTGTC                      <  1:3113704/35‑1
               CAACAAAATGGGTGCAGTACATTAGCGCTTTTGTC                      >  1:13475766/1‑35
                AACAAAATGGGTGCAGTACATTAGCGCTTTTGTCA                     >  1:10016796/1‑35
                 ACAAAATGGGTGCAGTACATTAGCGCTTTTGTCAG                    >  1:19752379/1‑35
                  CAAAATGGGTGCAGTACATTAGCGCTTTTGTCAGC                   <  1:796780/35‑1
                  CAAAATGGGTGCAGTACATTAGCGCTTTTGTCAGC                   <  1:13062143/35‑1
                  CAAAATGGGTGCAGTACATTAGCGCTTTTGTCAGC                   >  1:8978765/1‑35
                  CAAAATGGGTGCAGTACATTAGCGCTTTTGTCAGC                   >  1:5622237/1‑35
                  CAAAATGGGTGCAGTACATTAGCGCTTTTGTCAGC                   <  1:17429776/35‑1
                   AAAATGGGTGCAGTACATTAGCGCTTTTGTCAGCG                  >  1:16508950/1‑35
                   AAAATGGGTGCAGTACATTAGCGCTTTTGTCAGCG                  <  1:179675/35‑1
                    AAATGGGTGCAGTACATTAGCGCTTTTGTCAGCGA                 <  1:15433026/35‑1
                     AATGGGTGCAGTACATTAGCGCTTTTGTCAGCGAT                <  1:4228244/35‑1
                     AATGGGTGCAGTACATTAGCGCTTTTGTCAGCGAT                <  1:3739573/35‑1
                       TGGGTGCAGTACATTAGCGCTTTTGTCAGCGATCT              >  1:1871137/1‑35
                        GGGTGCAGTACATTAGCGCTTTTGTCAGCGATCTG             <  1:17664621/35‑1
                         GGTGCAGTACATTAGCGCTTTTGTCAGCGATCTGG            >  1:12723312/1‑35
                          nnGCAGNACATTAGCGCTTTTGTCAGCGATCTGGA           <  1:8854100/33‑1
                           TGCAGTACATTAGCGCTTTTGTCAGCGATCTGGAA          >  1:10647483/1‑35
                           TGCAGTACATTAGCGCTTTTGTCAGCGATCTGGAA          <  1:19382616/35‑1
                            GCAGTACATTAGCGCTTTTGTCAGCGATCTGGAAC         >  1:9291880/1‑35
                            GCAGTACATTAGCGCTTTTGTCAGCGATCTGGAAC         <  1:18258111/35‑1
                              AGTACATTAGCGCTTTTGTCAGCGATCTGGAACGC       >  1:16782446/1‑35
                               GTACATTAGCGCTTTTGTCAGCGATCTGGAACGCC      >  1:6191893/1‑35
                               GTACATTAGCGCTTTTGTCAGCGATCTGGAACGCC      <  1:810302/35‑1
                                TACATTAGCGCTTTTGTCAGCGATCTGGAACGCCT     >  1:19461052/1‑35
                                 ACATTAGCGCTTTTGTCAGCGATCTGGAACGCCTG    >  1:8235257/1‑35
                                 ACATTAGCGCTTTTGTCAGCGATCTGGAACGCCTG    <  1:5338331/35‑1
                                 ACATTAGCGCTTTTGTCAGCGATCTGGAACGCCTG    <  1:15070914/35‑1
                                 ACATTAGCGCTTTTGTCAGCGATCTGGAACGCCTG    >  1:9807891/1‑35
                                   ATTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGC  >  1:13650495/1‑35
                                   ATTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGC  <  1:10557950/35‑1
                                                                      
TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3893589‑3893554
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caTTAGCGCTTTTGTCAGCGATCTGGAACGCCTGGC  >  REL606/4110237‑4110270

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.