New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1332936 = | 97 (0.940) | 12 (0.150) | 5/38 | NT | 15.3% | coding (710/975 nt) | cysB | DNA‑binding transcriptional dual regulator, O‑acetyl‑L‑serine‑binding |
? | REL606 | = 2871320 | 56 (0.690) | coding (101/1032 nt) | galR | DNA‑binding transcriptional repressor |
Only 100 of 126 total aligned reads displayed.
AATAATTCACCTAAAGCCAGTGAAGCTTCCCGGCTGGCTGTGCATAGTGCAATGGAGTCTCTTAGCTAT > REL606/2871286‑2871354 | aataatTCTCCAAAAGCCAGTGAAGCTTCCCggct < 1:11493958/35‑1 (MQ=25) aataatTCACCTAAAGCCAGTGAAGCTTCCCggct > 1:2197379/1‑35 (MQ=255) aataatTCACCTAAAGCCAGTGAAGCTTCCCggct > 1:16804354/1‑35 (MQ=255) aataatTCACCAAAAGCCAGTGAAGCTTCCCggct < 1:3089684/35‑1 (MQ=255) ataatTCACCTAAAGCCAGTGAAGCTTCCCGGCTg > 1:19378839‑M2/1‑34 (MQ=255) ataatTCACCTAAAGCCAGTGAAGCTTCCCGGCTg < 1:14392096‑M2/35‑2 (MQ=255) ataatTCACCTAAAGCCAGTGAAGCTTCCCGGCTg < 1:6897461‑M2/35‑2 (MQ=255) ataatTCACCTAAAGCCAGTGAAGCTTCCCGGCTg > 1:12315878‑M2/1‑34 (MQ=255) ataatTCACCAAAAGCCAGTGAAGCTTCCCGGCTg > 1:12441485‑M2/1‑34 (MQ=255) ataatCCACCAAAAGCCAGTGAAGCTTCCCggctg < 1:2152271/35‑1 (MQ=25) taatTCACCTAAAGCCAGTGAAGCTTCCCTGCTgg < 1:9341445‑M2/35‑3 (MQ=255) taatTCACCTAAAGCCAGTGAAGCTTCCCGGCTgg > 1:2488380‑M2/1‑33 (MQ=255) taatTCACCTAAAGCCAGTGAAGCTTCCCGGCTgg > 1:11314856‑M2/1‑33 (MQ=255) aatTCACCTAAAGCCAGTGAAGCTTCCCGGCTggc < 1:5615524‑M2/35‑4 (MQ=255) atTCACCTAAAGCCAGTGAAGCTTCCCGGCTggct < 1:7696730‑M2/35‑5 (MQ=255) atTCACCTAAAGCCAGTGAAGCTTCCCGGCTggct > 1:19404827‑M2/1‑31 (MQ=255) atTCACCTAAAGCCAGTGAAGCTTCCCGGCTggct > 1:19074617‑M2/1‑31 (MQ=255) atTCACCTAAAGCCAGTGAAGCTTCCCGGCTggct < 1:18758958‑M2/35‑5 (MQ=255) atTCACCTAAAGCCAGTGAAGCTTCCCGGATggct > 1:15293752‑M2/1‑31 (MQ=255) atTCACCAAAAGCCAGTGAAGCTTCCCGGCTggct > 1:541035‑M2/1‑31 (MQ=255) ttCACCTAAAGCCAGTGAAGCTTCCCGGCTggctg < 1:17686168‑M2/35‑6 (MQ=255) tccACCAAAAGCCAGTGAAGCTTCCCGgctggctg < 1:4200344/33‑1 (MQ=37) tCACCTAAAGCCATTGAAGCTTCCCGGCTggctgg < 1:2008120‑M2/35‑7 (MQ=255) tCACCTAAAGCCAGTGAAGCTTCCCGGCTggctgg < 1:2085084‑M2/35‑7 (MQ=255) tCACCTAAAGCCAGTGAAGCTTCCCGGCTGGCtgt < 1:7410972/35‑1 (MQ=255) tCACCAAAAGCCAGTGAAGCTTCCAggctggcttt < 1:8559655/35‑3 (MQ=25) cACCTAAAGCCAGTGAAGCTTCCCGGCTGGCtgtg < 1:7892985/35‑1 (MQ=255) cACCAAAAGCCAGTGAAGCTTCCCGGCTGGCtgtg < 1:16864258/35‑1 (MQ=255) aCCAAAAGCCAGTGAAGCTTCCCGGCTGGCTGTGc < 1:3679313/35‑1 (MQ=255) ccaaaaGCCAGTGAAGCTTCACGGCTGGCTGTGCa < 1:12895809/32‑1 (MQ=38) ccTAAAGCCAGTGAAGCTTCCCGGCTggctggggg < 1:19463014‑M2/35‑10 (MQ=255) ccTAAAGCCAGTGAAGCTTCCCGGCTggctggggg < 1:13140971‑M2/35‑10 (MQ=255) ccTAAAGCCAGTGAAGCTTCCCGGCTggctggggg < 1:11569582‑M2/35‑10 (MQ=255) caaaaGCCAGTGAAGCTTCCCGGCTGGCTGTGCAt < 1:11595229/33‑1 (MQ=255) cTAAAGCCAGTGAAGCTTCCCGGCTggctgggggg < 1:15244839‑M2/35‑11 (MQ=255) cTAAAGCCAGTGAAGCTTCCCGGCTggctggggga < 1:20190005‑M2/35‑11 (MQ=255) tAAAGCCAGTGAAGCTTCCCGGCTggctgggggta < 1:20320243‑M2/35‑12 (MQ=255) tAAAGCCAGTGAAGCTTCCCGGCTggctgggggta < 1:10503289‑M2/35‑12 (MQ=255) tAAAGCCAGTGAAGCTTCCCGGCTggctggggagt < 1:8795204‑M2/35‑12 (MQ=255) tAAAGCCAGTGAAGCTTCCCGGCTGGCTGTGCATa < 1:5999415/35‑1 (MQ=255) tAAAGCCAGTGAAGCTTCCCGGCTGGCTGTGCATa < 1:6596881/35‑1 (MQ=255) aaaGCCAGTGAAGCTTCCCGGCTGGCTGTGCATAg < 1:15148312/35‑1 (MQ=255) aaGCCAGTGAAGCTTCCCGGCTggctgggggtagt < 1:8654104‑M2/35‑14 (MQ=255) aaGCCAGTGAAGCTTCCCGGCTggctgggggtagt < 1:11925715‑M2/35‑14 (MQ=255) aaGCCAGTGAAGCTTCCCGGCTggctgggggtagt < 1:1416064‑M2/35‑14 (MQ=255) aaGCCAGTGAAGCTTCCCGGCTggctggggggagg < 1:13074805‑M2/35‑14 (MQ=255) aaGCCAGTGAAGCTTCCCGGCTGGCTGTGCATAGt < 1:19958473/35‑1 (MQ=255) aaGCCAGTGAAGCTTCCCGGCTGGCTGTGCATAGt < 1:1071615/35‑1 (MQ=255) aGCCAGTGAAGCTTCCCGGCTggctgggggtgggg < 1:5705445‑M2/35‑15 (MQ=255) aGCCAGTGAAGCTTCCCGGCTggctgggggtaggg < 1:1480182‑M2/35‑15 (MQ=255) aGCCAGTGAAGCTTCCCGGCTggctgggggtaggg < 1:9313639‑M2/35‑15 (MQ=255) aGCCAGTGAAGCTTCCCGGCTGGCTGTGCATAGTg < 1:11277609/35‑1 (MQ=255) aGCCAGTGAAGCTTCCCGGCTGGCTGGGGATAGTg > 1:4916881/1‑35 (MQ=25) aGCCAGTGAAGCTTCCCGGCTGGCTGGGCGTaagg > 1:14332533/1‑32 (MQ=21) gCCAGTGAAGCTTCCCGGCTggctgggggtagtgg < 1:16441864‑M2/35‑16 (MQ=255) gCCAGTGAAGCTTCCCGGCTggctgggggtagggg < 1:3395557‑M2/35‑16 (MQ=255) gCCAGTGAAACTTCCCAGCTGGCTGTGCATAGTGc < 1:1737637/35‑1 (MQ=37) ccAGTGAAGCTTCCCGGCTGGCTGTGCATAGTGCa < 1:10117343/35‑1 (MQ=255) ccAGTGAAGCTTCCCGGCTGGCTGTGCATAGTGCa < 1:3492190/35‑1 (MQ=255) ccAGTGAAGCGTCCCGGCTGGCTGTGCATAGTGCa < 1:3509697/35‑1 (MQ=255) cAGTGAAGCTTCCCGGCTGTCTGGGGGTAGTGCaa > 1:13534838/1‑35 (MQ=16) cAGTGAAGCTTCCCGGCTGGCTTTGCATAGTGCaa > 1:10011456/1‑35 (MQ=255) cAGTGAAGCTTCCCGGCTGGCTGTGCATAGTGCaa < 1:15498038/35‑1 (MQ=255) cAGTGAAGCTTCCCGGCTGGCTGTGCATAGTGCaa < 1:10990389/35‑1 (MQ=255) cAGTGAAGCTTCCCGGCTGGCTGGGGGTAGTGGaa > 1:18630554/1‑35 (MQ=16) aGTGAAGCTTCCCGGCTGGCTGTGCATAGTGCAAt < 1:3713023/35‑1 (MQ=255) aGTGAAGCTTCCCGGCTGGCTGTGCATAGTGCAAt < 1:12322391/35‑1 (MQ=255) aGTGAAGCTTCCCGGCTGGCTGTGCATAGTGCAAt < 1:10355531/35‑1 (MQ=255) aGTGAAGCTTCCCGGCTGGCTGTGCATAGTGCAAt < 1:18815665/35‑1 (MQ=255) aGTGAAGCTTCCCGGCTGGCTGGGGGTAGTGcgaa > 1:16334902/1‑32 (MQ=16) aGTGAAGCTTCCCGGCTGGCTGGGGGTAGTGCaaa > 1:5405311/1‑34 (MQ=18) aGTGAAGCTTCCCGGCTGGCTGGGGGTAGTGCaaa > 1:19999940/1‑34 (MQ=18) gTGAAGCTTCCCGGCTGGCTGTGCATAGTGCAATg < 1:13377588/35‑1 (MQ=255) gTGAAGCTTCCCGGCTGGCTGTGCATAGTGCAATg < 1:10204389/35‑1 (MQ=255) gTGAAGCTTCCCGGCTGGCTGGGGGTAATGCAATg > 1:749223/1‑35 (MQ=16) tGAAGCTTCCCGGCTGGCTGTGCATAGTGCAATgg < 1:4965697/35‑1 (MQ=255) gAAGCTTCCCGGCTGGCTGTGCATAGTGCAATGGa < 1:15059429/35‑1 (MQ=255) aaGCTTCCCGGCTGGCTGTGCATAGTGCAATGGAg < 1:19129859/35‑1 (MQ=255) aaGCTTCCCGGCTGGCTGTGCATAGTGCAATGGAg < 1:11478302/35‑1 (MQ=255) aaGCTTCCCGGCTGGCTGGGGGTAGTGCAATGGAg > 1:14992214/1‑35 (MQ=21) aGCTTCCCGGCTGGCTGTGCATAGTGCAATGGAGt < 1:18593502/35‑1 (MQ=255) cTTCCCGGCTGGCTGTGCATAGTGCAATGGAGtct < 1:1174024/35‑1 (MQ=255) ttCCTGGCTGGCTGTGCATAGTGCAATGGAGtctc < 1:11081022/35‑1 (MQ=255) ttCCCGGCTGGCTGTGCATAGTGCAATGGAGtctc < 1:3655030/35‑1 (MQ=255) ttCCCGGCTGGCTGTGCATAGTGCAATGGAGtctc < 1:2335138/35‑1 (MQ=255) cccGGCTGGCTGTGCATAGTGCAATGGAGTCTCtt < 1:6117597/35‑1 (MQ=255) cccGGCTGGCTGTGCATAGTGCAATGGAGTCTCtt < 1:12915080/35‑1 (MQ=255) cccGGCTGGCTGTGCATAGTGCAATGGAGTCTCtt < 1:1929156/35‑1 (MQ=255) cccGGCTGGCTGTGCATAGTGCAATGGAGTCTCtt < 1:20026016/35‑1 (MQ=255) ccGGCTGGCTGTGCATAGTGCAATGGAGTCTCTTa < 1:12028107/35‑1 (MQ=255) ccGGCTGGCTGTGCATAGTGCAATGGAGTCTCTTa < 1:16673364/35‑1 (MQ=255) ccGGCTGGCTGTGCATAGTGCAATGGAGTCTCTTa < 1:184666/35‑1 (MQ=255) ccGGCTGGCTGTGCATAGTGCAATGGAGTCTCTTa < 1:9532596/35‑1 (MQ=255) cGGCTGGCTGTGCATAGTGCAATGGAGTCTCTTAg < 1:2491979/35‑1 (MQ=255) ggctggctTTGCATAGTGCAATGGAGTCTCTTAGc > 1:12705816/1‑35 (MQ=255) ggctggctGTGCATAGTGCAATGGAGTCTCTTAGc < 1:14728311/35‑1 (MQ=255) gctggctgTGCATAGTGCAATGGAGTCTCTTAGCt < 1:17773874/35‑1 (MQ=255) tggctgTGCATAGTGCAATGGAGTCTCTTAGCTAt < 1:4956363/35‑1 (MQ=255) tggctgTGCATAGTGCAATGGAGTCTCTTAGCTAt < 1:17252640/35‑1 (MQ=255) tggctgTGCATAGTGCAATGGAGTCTCTTAGCTAt < 1:8263830/35‑1 (MQ=255) | AATAATTCACCTAAAGCCAGTGAAGCTTCCCGGCTGGCTGTGCATAGTGCAATGGAGTCTCTTAGCTAT > REL606/2871286‑2871354 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |