New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 327441 = | 112 (1.090) | 14 (0.140) | 5/48 | NT | 14.4% | intergenic (+199/‑37) | prpE/codB | predicted propionyl‑CoA synthetase with ATPase domain/cytosine transporter |
? | REL606 | 1238616 = | 54 (0.530) | coding (896/1299 nt) | dadA | D‑amino acid dehydrogenase small subunit |
Only 100 of 111 total aligned reads displayed.
CCGGTATCCACCATTCTTGATGAAACCTACAAAATCGCCATTACCCGTTTCGATAACCGCATTCGTGTT > REL606/1238582‑1238650 | ccGGTATCCACCATTCTTGATGAAACCTACAAAAt < 1:3153044/35‑1 (MQ=255) ccGGTATCCACCATTCTTGATGAAACCTACAAAAt > 1:18364885/1‑35 (MQ=255) ccGGTATCCACCATTCTTGATGAAACCTACAAAAt < 1:5869364/35‑1 (MQ=255) ccGGTATCCACCATTCTTGATGAAACCTACAAAAt > 1:15727937/1‑35 (MQ=255) ccGGTATCCACCATTCTTGATGAAACCTACAAAAt > 1:15402893/1‑35 (MQ=255) ccGGTATCCACCATTCTTGATGAAACCTACAAAAt > 1:9031361/1‑35 (MQ=255) ccGGTATCCACCATTCTTGATGAAACCTACAAAAt > 1:10600682/1‑35 (MQ=255) cgttATCCACCATTCTTGATGAAACCTACAAAATc < 1:5026829/32‑1 (MQ=255) cGGTATCCACCATTCTTGATGAAACCTACAAAATc < 1:17154322/35‑1 (MQ=255) cGGTATCCACCATTCTTGATGAAACCTACAAAATc < 1:4446157/35‑1 (MQ=255) cGGTATCCACCATTCTTGATGAAACCTACAAAATc > 1:2663883/1‑35 (MQ=255) cGGTATCCACCATTCTTGATGAAACCTACAAAATc > 1:2442038/1‑35 (MQ=255) cGGTATCCACCATTCTTGATGAAACCTACAAAATc < 1:2192067/35‑1 (MQ=255) cGGTATCCAACATTCTTGATGAAACCTACAAAATc < 1:1042563/35‑1 (MQ=255) ggTATCCACCATTCTTGATGAAACCTACAAAATCg > 1:14947012/1‑35 (MQ=255) ggTATCCACCATTCTTGATGAAACCTACAAAATCg < 1:14489038/35‑1 (MQ=255) gTATCCACCATTCTTGATGAAACCTACAAAATCGc < 1:1334635/35‑1 (MQ=255) gTATCCACCATTCTTGATGAAACCTACAAAATCGc > 1:18126842/1‑35 (MQ=255) gTATCCACCATTCTTGATGAAACCTACAAAATCGc > 1:11129504/1‑35 (MQ=255) gTATCCACCATTCTTGATGAAACCTACAAAATCGc < 1:11492943/35‑1 (MQ=255) gTATCCACCATTCTTGATGAAACCTACAAAATCGc > 1:18149889/1‑35 (MQ=255) tATCCACCATTCTTGATGAAACCTACAAAATCGcc > 1:4210095/1‑35 (MQ=255) tATCCACCATTCTTGATGAAACCTACAAAATCGcc < 1:67636/35‑1 (MQ=255) aTCCACCATTCTTGATGAAACCTACAAAATCGCCa > 1:10631353/1‑35 (MQ=255) aTCCACCATTCTTGATGAAACCTACAAAATCGCCa < 1:17384527/35‑1 (MQ=255) ccaccaTTCTTGATGAAACCTACAAAATCGCCAtt > 1:9183864/1‑35 (MQ=255) ccaccaTTCTTGATGAAACCTACAAAATCGCCAtt > 1:20061320/1‑35 (MQ=255) ccaccaTTCTTGATGAAACCTACAAAATCGCCAtt > 1:5406015/1‑35 (MQ=255) ccaccaTTCTTGATGAAACCTACAAAATCGCCAtt > 1:7224611/1‑35 (MQ=255) caccaTTCTTGATGAAACCTACAAAATCGCCATTa > 1:12298695/1‑35 (MQ=255) caccaTTCTTGATGAAACCTACAAAATCGCCATTa > 1:12326695/1‑35 (MQ=255) accaTTCTTGATGAAACCTACAAAATCGCCATTAc > 1:8985557/1‑35 (MQ=255) accaTTCTTGATGAAACCTACAAAATCGCCATTAc > 1:19399206/1‑35 (MQ=255) accaTTCTTGATGAAACCTACAAAATCGCCATTAc > 1:5161583/1‑35 (MQ=255) ccaTTCTTGATGAAACCTACAAAATCGCTATTAcc > 1:3428564/1‑35 (MQ=255) ccaTTCTTGATGAAACCTACAAAATCGCCATTAcc > 1:5921439/1‑35 (MQ=255) ccaTTCTTGATGAAACCTACAAAATCGCCATTAcc > 1:1290461/1‑35 (MQ=255) caTTCTTGATGAAACCTACAAAATCGCCATTAccc > 1:6066021/1‑35 (MQ=255) caTTCTTGATGAAACCTACAAAATCGCCATTAccc > 1:6560349/1‑35 (MQ=255) aTTCTTGATGAAACCTACAAAATCGCCATTACCCg > 1:16131834/1‑35 (MQ=255) aTTCTTGATGAAACCTACAAAATCGCCATTACCCg > 1:18821707/1‑35 (MQ=255) aTTCTTGATGAAACCTACAAAATCGCCATTACCCg > 1:12088692/1‑35 (MQ=255) aTTCTTGATGAAACCTACAAAATCGCCATTACCCg > 1:281932/1‑35 (MQ=255) ttCTTGATGAAACCTGCAAAATCGCCATTACCCGt > 1:593722/1‑35 (MQ=255) ttCTTGATGAAACCTACAAAATCGCCATTACCCGt > 1:17576660/1‑35 (MQ=255) ttCTTGATGAAACCTACAAAATCGCCATTACCCGt > 1:9166616/1‑35 (MQ=255) ttCTTGATGAAACCTACAAAATCGCCATTACCCGt > 1:15254880/1‑35 (MQ=255) tCTTGATGAAACCTACAAAATCGCCATTACCTGtt > 1:15564841/1‑35 (MQ=255) cTTGATGAAACCTACAAAATCGCCATTACCCGttt > 1:14126869/1‑35 (MQ=255) tgatgaAACCTACAAAATCGCCATTACCCGTTTCg > 1:3675405/1‑35 (MQ=255) gatgaAACCTACAAAATCGCCATTACCCGTTTCGa > 1:15998989/1‑35 (MQ=255) gatgaAACCTACAAAATCGCCATTACCCGTTTCGa > 1:7702801/1‑35 (MQ=255) gatgaAACCTACAAAATCGCCATTACCCGTTTCGa > 1:9019340/1‑35 (MQ=255) atgaAACCTACAAAATCGCCATTACCCGTTTCGAt > 1:10888602/1‑35 (MQ=255) atgaAACCTACAAAATCGCCATTACCCGTTTCGAt > 1:8645233/1‑35 (MQ=255) ataaacccaaaaaatTCGCCATTACCCGTTTCGAt < 1:993304‑M2/20‑1 (MQ=255) tgaAACCTACAAAATCGCCATTACCCGTTTCGATa > 1:12130482/1‑35 (MQ=255) tgaAACCTACAAAATCGCCATTACCCGTTTCGATa > 1:2795535/1‑35 (MQ=255) tgaAACCTACAAAATCGCCATTACCCGTTTCGATa > 1:17320762/1‑35 (MQ=255) tgaAACCTACAAAATCGCCATTACCCGTTTCGATa > 1:18097342/1‑35 (MQ=255) taaacccaaaaaaaTCGCCATTACCCGTTTCGATa < 1:10398839‑M2/21‑1 (MQ=255) gaAACCTACAAAATCGCCATTACCCGTTTCGATaa > 1:4899369/1‑35 (MQ=255) gaAACCTACAAAATCGCCATTACCCGTTTCGATaa > 1:16035181/1‑35 (MQ=255) gaAACCTACAAAATCGCCATTACCCGTTTCGATaa > 1:14186757/1‑35 (MQ=255) gaAACCTACAAAATCGCCATTACCCGTTTCGATaa > 1:1275784/1‑35 (MQ=255) gaAACCTACAAAATCGCCATTACCCGTTTCGATaa > 1:214160/1‑35 (MQ=255) gaAACCTACAAAATCGCCATTACCCGTTTCGATaa > 1:10017106/1‑35 (MQ=255) aacccaaaaaatTCGCCATTACCCGTTTCGATAAc < 1:6673431‑M2/23‑1 (MQ=255) aaaCCTACAAAATCGCCATTACCCGTTTCGATAAc > 1:10869605/1‑35 (MQ=255) aaaCCTAAAAAATCGCCATTACCCGTTTCGATAAc < 1:1156038/35‑1 (MQ=255) acccaaaaaatTCGCCATTACCCGTTTCGATAAcc < 1:17547192‑M2/24‑1 (MQ=255) acccaaaaaatTCGCCATTACCCGTTTCGATAAcc < 1:5918530‑M2/24‑1 (MQ=255) acccaaaaaatTCGCCATTACCCGTTTCGATAAcc < 1:9216358‑M2/24‑1 (MQ=255) aaCCTACAAAATCGCCATTACCCGTTTCGATAAcc > 1:12635115/1‑35 (MQ=255) cccaaaaaatTCGCCATTACCCGTTTCGATAACCg < 1:18675674‑M2/25‑1 (MQ=255) cccaaaaaatTCGCCATTACCCGTTTCGATAACCg < 1:5069163‑M2/25‑1 (MQ=255) ccTACAAAATCGCCATTACCCGTTTCGATAACCGc > 1:5088952/1‑35 (MQ=255) taaaaatTCGCCATTACCCGTTTCGATAACCGCAt < 1:9143273‑M2/28‑1 (MQ=255) tACAAAATCGCCATTACCCGTTTCGATAACCGCAt > 1:1191765/1‑35 (MQ=255) tACAAAATCGCCATTACCCGTTTCGATAACCGCAt > 1:12993355/1‑35 (MQ=255) aaaaaatTCGCCATTACCCGTTTCGATAACCGCAt < 1:3065550‑M2/28‑1 (MQ=255) aaaaaatTCGCCATTACCCGTTTCGATAACCGCAt < 1:454845‑M2/28‑1 (MQ=255) aaaaatTCGCCATTACCCGTTTCGATAACCGCAtt < 1:2820629‑M2/29‑1 (MQ=255) aaaaatTCGCCATTACCCGTTTCGATAACCGCAtt < 1:11939163‑M2/29‑1 (MQ=255) aCAAAATCGCCATTACCCGTTTCGATAACCGCAtt > 1:19009661/1‑35 (MQ=255) cAAAATCGCCATTACCCGTTTCGATAACCGCATTc > 1:6396718/1‑35 (MQ=255) aaaatTCGCCATTACCCGTTTCGATAACCGCATTc < 1:5708027‑M2/30‑1 (MQ=255) aaaatTCGCCATTACCCGTTTCGATAACCGCATTc < 1:16842277‑M2/30‑1 (MQ=255) aaaatTCGCCATTACCCGTTTCGATAACCGCATTc < 1:13836290‑M2/30‑1 (MQ=255) aaaaTCGCCATTACCCGTTTCGATAACCGCATTCg > 1:9369434/1‑35 (MQ=255) aatTCGCCATTACCCGTTTCGATAACCGCATTCgt < 1:6943466‑M2/32‑1 (MQ=255) aatTCGCCATTACCCGTTTCGATAACCGCATTCgt < 1:11655752‑M2/32‑1 (MQ=255) aaaTCGCCATTACCCGTTTCGATAACCGCATTCgt > 1:19010136/1‑35 (MQ=255) aaaTCGCCATTACCCGTTTCGATAACCGCATTCgt > 1:10183033/1‑35 (MQ=255) atTCGCCATTACCCGTTTCGATAACCGCATTCgtg < 1:4687762‑M2/33‑1 (MQ=255) tTCGCCATTACCCGTTTCGATAACCGCATTCgtgt < 1:5522866‑M2/34‑1 (MQ=255) tTCGCCATTACCCGTTTCGATAACCGCATTCgtgt < 1:17861928‑M2/34‑1 (MQ=255) aTCGCCATTACCCGTTTCGATAACCGCATTCgtgt > 1:8629568/1‑35 (MQ=255) tCGCCATTACCCGTTTCGATAACCGCATTCGTGtt < 1:8403073/35‑1 (MQ=255) tCGCCATTACCCGTTTCGATAACCGCATTCGTGtt < 1:1609267/35‑1 (MQ=255) | CCGGTATCCACCATTCTTGATGAAACCTACAAAATCGCCATTACCCGTTTCGATAACCGCATTCGTGTT > REL606/1238582‑1238650 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |