New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 108685 | 72 (0.700) | 24 (0.310) | 8/36 | NT | 29.3% | coding (577/1152 nt) | ftsZ | cell division protein FtsZ |
? | REL606 | = 2243652 | 62 (0.800) | coding (1242/1944 nt) | ccmF | heme lyase, CcmF subunit |
Only 100 of 107 total aligned reads displayed.
GATGCGTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/108646‑108685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgGGGGCGGGATCGCCCGCGTAAGATCCGCAATTTA < REL606/2243652‑2243619 GATGCGTTTGGCGCAGCGAACGCTGTACTGAAAGG > 1:8427398/1‑35 GATGCGTTTGGCGCAGCGAACGATGTACTGAAAGG < 1:14874963/35‑1 GATGCGTTTGGCGCAGCGAACGATGTACTGAAAGG < 1:1396152/35‑1 ATGCGTTTGGCGCAGCGAACGATGTACTGAAAGGC < 1:7783416/35‑1 ATGCGTTTGGCGCAGCGAACGATGTACTGAAAGGC < 1:5881512/35‑1 ATGCGTTTGGCGCAGCGAACGATGTACTGAAAGGC > 1:5369834/1‑35 ATGCGTTTGGCGCAGCGAACGATGTACTGAAAGGC < 1:5252888/35‑1 ATGCGTTTGGCGCAGCGAACGATGTACTGAAAGGC < 1:4700263/35‑1 ATGCGTTTGGCGCAGCGAACGATGTACTGAAAGGC < 1:2948207/35‑1 ATGCGTTTGGCGCAGCGAACGATGTACTGAAAGGC > 1:16932206/1‑35 TGCGTTTGGCGCAGCGAACGATGTACTGAAAGGCG < 1:9955973/35‑1 TGCGTTTGGCGCAGCGAACGATGTACTGAAAGGCG < 1:1314371/35‑1 GCGTTTGGCGCAGCGAACGATGTACTGAAAGGCGC > 1:2926739/1‑35 CGTTTGGCGCAGCGAACGATGTACTGAAAGGCGCT < 1:9955014/35‑1 CGTTTGGCGCAGCGAACGATGTACTGAAAGGCGCT < 1:11802191/35‑1 CGTTTGGCGCAGCGAACGATGTACTGAAAGGCGCT > 1:5281831/1‑35 CGTTTGGCGCAGCGAACGATGTACTGAAAGGCGCT < 1:19373197/35‑1 CGTTTGGCGCAGCGAACGATGTACTGAAAGGCGCT > 1:17350589/1‑35 CGTTTGGCGCAGCGAACGATGTACTGAAAGGCGCT < 1:738688/35‑1 CGTTTGGCGCAGCGAACGAGGTACTGAAAGGCGCT > 1:3889433/1‑35 CGTTTGGCGAAGCGAACGATGTACTGAAAGGCGCT < 1:5752940/35‑1 GTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTG > 1:18514854/1‑35 GTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTG > 1:5441365/1‑35 GTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTG < 1:5584719/35‑1 GTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTG > 1:17386199/1‑35 GTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTG < 1:17292619/35‑1 GTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTG < 1:20338407/35‑1 GTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTG > 1:7776829/1‑35 GTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTG > 1:2299055/1‑35 GTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTG < 1:15875151/35‑1 GTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTG > 1:925572/1‑35 GTTTGGCGCAGCGAACGATGTAATGAAAGGCGCTG > 1:1628508/1‑35 TTTGGCGCAGCGAACGATGTACTGAAAGGCGCTGG > 1:20211744/1‑35 TTTGGCGCAGCGAACGATGTACTGAAAGGCGCTGG > 1:9775802/1‑35 TTTGGCGCAGCGAACGATGTACTGAAAGGCGCTGG > 1:19954661/1‑35 TTTGGCGCAGCGAACGATGTACTGAAAGGCGCTGG > 1:11090270/1‑35 TTGGCGCAGCGAACGATGTACTGAAAGGCGCTGGG > 1:16773438/1‑35 TTGGCGCAGCGAACGATGTACTGAAAGGCGCTGGG > 1:6464542/1‑35 TGGCTCAGCGAACGATGTACTGAAAGGCGCTGGGG > 1:3187120/1‑35 TGGCGCAGCGAACGATGTACTGAAAGGCGCTGGGG > 1:1877703/1‑35 GGCGCAGCGAACGATGTACTGAAAGGCGCTGGGGG > 1:974305/1‑35 GGCGCAGCGAACGATGTACTGAAAGGCGCTGGGGG > 1:1188925/1‑35 GCGCAGCGAACGATGTACTGAAAGGCGCTGGGGGa > 1:17655069/1‑34 GCGCAGCGAACGATGTACTGAAAGGCGCTGGGGGa > 1:4269310/1‑34 CGCAGCGAACGATGTACTGAAAGGCGCTGGGGGgg > 1:9279756/1‑33 CGCAGCGAACGATGTACTGAAAGGCGCTGGGGGgg > 1:12273086/1‑33 CGCAGCGAACGATGTACTGAAAGGCGCTGGGGGag > 1:6519085/1‑33 GCAGCGAACGATGTACTGAAAGGCGCTGGGGGGGG > 1:15605818/1‑35 GCAGCGAACGATGTACTGAAAGGCGCTGGGGGAGG > 1:5306946/1‑35 GCAGCGAACGATGTACTGAAAGGCGCTGGGGGAGG > 1:8357909/1‑35 CAGCGAACGATGTACTGAAAGGCGCTGGGGGGGGG > 1:12008510/1‑35 CAGCGAACGATGTACTGAAAGGCGCTGGGGGGGGG > 1:14842749/1‑35 CAGCGAACGATGTACTGAAAGGCGCTGGGGGAGGG > 1:5440666/1‑35 CAGCGAACGATGTACTGAAAGGCGCTGGGGGAGGG > 1:14355719/1‑35 CAGCGAACGATGTACTGAAAGGCGCTGGGGGAGGG > 1:3994694/1‑35 AGCGAACGATGTACTGAAAGGCGCTGGGGGGGGGA > 1:4766888/1‑35 AGCGAACGATGTACTGAAAGGCGCTGGGGGGGGGA > 1:12147995/1‑35 AGCGAACGATGTACTGAAAGGCGCTGGGGGAGGGg > 1:4635031/1‑34 AGCGAACGATGTACTGAAAGGCGCTGGGGGAGGGg > 1:236580/1‑34 GCGAACGATGTACTGAAAGGCGCTGGGGGCGGGcg > 1:154525/1‑33 GCGAACGATGTACTGAAAGGCGCTGGGGGAGGGAT > 1:16215945/1‑35 GCGAACGATGTACTGAAAGGCGCTGGGGGAGGGAT > 1:8106939/1‑35 GCGAACGATGTACTGAAAGGCGCTGGGGGAGGGAT > 1:15995297/1‑35 GCGAACGATGTACTGAAAGGCGCTGGGGGAGGGAT > 1:8685535/1‑35 GCGAACGATGTACTGAAAGGCGCTGGGGGAGGGAT > 1:9061902/1‑35 CGAACGATGTACTGAAAGGCGCTGGGGGAGGGATC > 1:3287380/1‑35 GAACGATGTACTGAAAGGCGCTGGGGGAGGGATCG > 1:10010171/1‑35 AACGATGTACTGAAAGGCGCTGGGGGAGGGATCGC > 1:17420108/1‑35 ACGATGTACTGAAAGGCGCTGGGGGAGGGATCGCt > 1:11808550/1‑34 ACGATGTACTGAAAGGCGCTGGGGGAGGGATCGCC > 1:20104923/1‑35 gctCTGGGGGCGGGATCGCCCGCGTAAGATCCGCA > 1:18304925/4‑35 GCGCTGGGGGCGGGATCGCCCGCGTAAGATCCGCA < 1:10391372/35‑1 GCGCTGGGGGCGGGATCGCCCGCGTAAGATCCGCA > 1:3279647/1‑35 GCGCTGGGGGCGGGATCGCCCGCGTAAGATCCGCA < 1:7677803/35‑1 CGCTGGGGGCGGGATCGCCCGCGTAAGATCCGCAA < 1:18173705/35‑1 CGCTGGGGGCGGGATCGCCCGCGTAAGATCCGCAA < 1:9603613/35‑1 CGCTGGGGGCGGGATCGCCCGCGTAAGATCCGCAA < 1:10917702/35‑1 CGCTGGGGGCGGGATCGCCCGCGTAAGATCCGCAA > 1:10210805/1‑35 CGCTGGGGGCGGGATCGCCCGCGTAAGATCCGCAA > 1:7408259/1‑35 gaTGGGGGCGGGATCGCCCGCGTAAGATCCGCAAT < 1:6271150/33‑1 GCTGGGGGCGGGATCGCCCGCGTAAGATCCGCAAT < 1:8001207/35‑1 GCTGGGGGCGGGATCGCCCGCGTAAGATCCGCAAT > 1:16560695/1‑35 GCTGGGGGCGGGATCGCCCGCGTAAGATCCGCAAT < 1:7186990/35‑1 GCTGGGGGCGGGATCGCCCGCGTAAGATCCGCAAT < 1:2169997/35‑1 cgGGGGGCGGGATCGCCCGCGTAAGATCCGCAATT < 1:15032295/33‑1 CTGGGGGCGGGATCGCCCGCGTAAGATCCGCAATT > 1:11096548/1‑35 CTGGGGGCGGGATCGCCCGCGTAAGATCCGCAATT > 1:12070260/1‑35 CTGGGGGCGGGATCGCCCGCGTAAGATCCGCAATT < 1:5548666/35‑1 CTGGGGGCGGGATCGCCCGCGTAAGATCCGCAATT < 1:13886847/35‑1 CTGGGGACGGGATCGCCCGCGTAAGATCCGCAATT < 1:1746077/35‑1 TGGGGGCGGGATCGCCCGCTTAAGATCCGCAATTT > 1:7143748/1‑35 TGGGGGCGGGATCGCCCGCTTAAGATCCGCAATTT > 1:6187249/1‑35 TGGGGGCGGGATCGCCCGCTTAAGATCCGCAATTT > 1:844280/1‑35 TGGGGGCGGGATCGCCCGCGTAAGATCCGCAATTT < 1:10270942/35‑1 TGGGGGCGGGATCGCCCGCGTAAGATCCGCAATTT < 1:8587191/35‑1 TGGGGGCGGGATCGCCCGCGTAAGATCCGCAATTT > 1:9248478/1‑35 GGGGGCGGGATCGCCCGCGTAAGATCCGCAATTTA > 1:3357108/1‑35 GGGGGCGGGATCGCCCGCGTAAGATCCGCAATTTA > 1:9117598/1‑35 GGGGGCGGGATCGCCCGCGTAAGATCCGCAATTTA > 1:17625957/1‑35 GGGGGCGGGATCGCCCGCGTAAGATCCGCAATTTA < 1:10158816/35‑1 GATGCGTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/108646‑108685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgGGGGCGGGATCGCCCGCGTAAGATCCGCAATTTA < REL606/2243652‑2243619 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |