New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3069621 | 69 (0.670) | 12 (0.140) | 4/40 | NT | 17.1% | coding (838/1500 nt) | pitB | phosphate transporter |
? | REL606 | = 3625456 | 59 (0.690) | pseudogene (7/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
Only 100 of 219 total aligned reads displayed.
GTGATGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCATTCACCAATCCCCT > REL606/3625422‑3625490 | tGATGGTTGTTGTCCCCACGCCTCCCCGCCCCCCC < 1:9259149‑M1/35‑1 (MQ=255) aTGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCTG < 1:14295100‑M1/35‑1 (MQ=255) tGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCctg < 1:12126136‑M1/35‑4 (MQ=255) tGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGC < 1:15659230‑M1/35‑1 (MQ=255) ggTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGCa > 1:15790644/1‑35 (MQ=255) ggTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGCa > 1:5908933/1‑35 (MQ=255) ttgttgTCCCCACGCCTCCCCGCTCCCCCCGCAAt > 1:12672660/1‑35 (MQ=38) gttgtCCCCACGCCTCCCCGCCCCCCCTGCAAT‑cc < 1:16468131/35‑1 (MQ=255) gttgtCCCCACGCCTCCCCGCCCCCCCTGCAAT‑cc > 1:18515965/1‑35 (MQ=255) ttgtCCCCACGCCTCCCCGCCCCCCCTGCAAT‑ccc < 1:6867857/35‑1 (MQ=255) gtCCCCACGCCTCCCCGCCCCCCCTGCAAT‑CCCAg > 1:13713402/1‑35 (MQ=255) ccccCCCCCCCCCCCCCCCCCCTGCCATACCCAgg < 1:9678019/35‑2 (MQ=2) cccGCGCCTCCCCCCCCCCGCCACAAT‑TCTAGTag < 1:4857769/35‑2 (MQ=12) cccACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTAc > 1:8116624/1‑35 (MQ=255) cccACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTAc < 1:17229695/35‑1 (MQ=255) ccACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACg > 1:12998095/1‑35 (MQ=255) ccACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACg > 1:12582013/1‑35 (MQ=255) ccACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACg < 1:8975921/35‑1 (MQ=255) ccAAGCCTCCCCGCACCCCCTGCAAT‑CCCAGTACg < 1:14454292/35‑1 (MQ=255) cACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACgg > 1:7501651/1‑35 (MQ=255) cACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACgg < 1:7744756/35‑1 (MQ=255) cACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACgg < 1:19775017/35‑1 (MQ=255) cACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACgg > 1:19932768/1‑35 (MQ=255) aCGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGc > 1:1917258/1‑35 (MQ=255) gCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCa > 1:1164153/1‑35 (MQ=255) gCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCa > 1:14927046/1‑35 (MQ=255) gCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCa < 1:7086372/35‑1 (MQ=255) ccTCCCCCCCCCCCCTGCcattgaaacggatcccg < 1:8674388‑M1/35‑18 (MQ=255) cTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCAtt > 1:17119849/1‑35 (MQ=255) cTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCAtt > 1:20456641/1‑35 (MQ=255) cTCCCCCCCCCCCCTGCcattgaaacggatcccgg < 1:1308403‑M1/35‑19 (MQ=255) cccccgCCCCCCctgccattcaacggttgaaacca > 1:3913297‑M2/2‑12 (MQ=255) acccccCCCCCCCTGCcattgaaacggatcccggt < 1:6293306‑M1/34‑20 (MQ=255) ccccGCCCCCCctgccattcaacggttgaaaccag > 1:9786142‑M2/1‑11 (MQ=255) ccccGCCCCCCctgccaatttcggatgcggtgcga > 1:9425154‑M2/1‑11 (MQ=255) ccccCCCCCCCctgccgcagaagttgattgcgatg > 1:16499908‑M2/1‑11 (MQ=255) ccccCCCCCCCctgccacttcaccgtcggcgcgca > 1:2731959‑M2/1‑11 (MQ=255) ccccCCCCCCCCTGCcattgaaacggatcccggtg < 1:9634289‑M1/35‑21 (MQ=255) ccccCCCCCCCCTGCcattgaaacggatcccggtg < 1:10625689‑M1/35‑21 (MQ=255) cccGCCCCCCctgccattcaacggttgaaaccagc > 1:6484225‑M2/1‑10 (MQ=255) cccGCCCCCCCTGCAAT‑CCCAGTACGGCCATTCAc > 1:5383051/1‑35 (MQ=255) cccCCCCCCCctgccacttcaccgtcggcgcgcat > 1:3450120‑M2/1‑10 (MQ=255) cccCCCCCCCctgccacttcaccgtcggcgcgcat > 1:7168522‑M2/1‑10 (MQ=255) cccCCCCCCCctgccacttcaccgtcggcgcgcat > 1:19013933‑M2/1‑10 (MQ=255) cccCCCCCCCCTGCcattgaaacggatcccggtgc < 1:5198390‑M1/35‑22 (MQ=255) ccGCCGCCCctgccattcaacggttgaaaccagcc > 1:5701936‑M2/1‑9 (MQ=255) ccGCCCCCCctgccaatgtcggatgcggtgcgagc > 1:4660374‑M2/1‑9 (MQ=255) ccGCCCCCCCTGCcattgaaacggatcccggtgca < 1:13469155‑M1/35‑23 (MQ=255) ccGCCCCCCCTGCAAT‑CCCAGTACGGCCATTCAcc < 1:3580360/35‑1 (MQ=255) ccCCCCCCCctgccaatgtcggatgcggtgcgagc > 1:14016257‑M2/1‑9 (MQ=255) ccccccccctgccgcagaagttgattgcgatggaa > 1:16029725‑M2/3‑8 (MQ=255) ccccccccctgccacttcaccgtcggcgcgcattt > 1:12921888‑M2/3‑8 (MQ=255) ccccccccctgccaatgtcggatgcggtgcgagcg > 1:5798921‑M2/3‑8 (MQ=255) ccccccccctgCcattgaaacggatcccggtgcaa < 1:8891533‑M1/33‑24 (MQ=255) ccccccccctgCcattgaaacggatcccggtgcaa < 1:17371525‑M1/33‑24 (MQ=255) cGCCCCTCctgccattcaacggttgaaaccagcct > 1:18222591‑M2/1‑8 (MQ=255) cGCCCCCCctgccaatgtcggatgcggtgcgagcg > 1:8504143‑M2/1‑8 (MQ=255) cGCCCCCCCTGCAAT‑CCCAGTACGGCCATTCACCa > 1:4338125/1‑35 (MQ=255) tgcccccctgccattcaacggttgaaaccagcctg > 1:10844572‑M2/3‑7 (MQ=255) gCCCCCCCTGCAAT‑CCCAGTACGGCCATTCACCaa > 1:7252871/1‑35 (MQ=255) cccccccctgccattcaacggttgaaaccagcctg > 1:15180992‑M2/2‑7 (MQ=255) cccccccctGCcattgaaacggatcccggtgcaag < 1:2482922‑M1/34‑25 (MQ=255) ccccccctgccgcagaagttgattgcgatggaacc > 1:4958347‑M2/1‑6 (MQ=255) ccccccctgccacttcaccgtcggcgcgcatttca > 1:19346849‑M2/1‑6 (MQ=255) cccccccTGCcattgaaacggatcccggtgcaagt < 1:13869767‑M1/35‑26 (MQ=255) ccgccctgccgcagaagttgattgcgatggaacct > 1:3020323‑M2/1‑5 (MQ=255) cccccctgccacttcaccgtcggcgcgcatttcaa > 1:13638740‑M2/1‑5 (MQ=255) cccccctgccaatgtcggatgcggtgcgagcgcct > 1:5353572‑M2/1‑5 (MQ=255) ccccccTGCcattgaaacggatcccggtgcaagtg < 1:10130357‑M1/35‑27 (MQ=255) ccccccTGCcattgaaacggatcccggtgcaagtg < 1:15353296‑M1/35‑27 (MQ=255) ccccccTGCcattgaaacggatcccggtgcaagtg < 1:376980‑M1/35‑27 (MQ=255) ccccccTGCAAT‑CCCAGTCCGGCCATTCACCAATc < 1:7863695/35‑1 (MQ=255) ccccctgccgcagaagttgattgcgatggaacctc > 1:16779454‑M2/1‑4 (MQ=255) ccccctgccgcagaagttgattgcgatggaacctc > 1:1693778‑M2/1‑4 (MQ=255) ccccctgccattcaacggttgaaaccagcctgcta > 1:8604599‑M2/1‑4 (MQ=255) ccccctgccattcaacggttgaaaccagcctgcta > 1:15460511‑M2/1‑4 (MQ=255) ccccctgccacttcaccgtcggcgcgcatttcaat > 1:20425662‑M2/1‑4 (MQ=255) ccccctgccaatgtcggatgcggtgcgagcgcctt > 1:20078317‑M2/1‑4 (MQ=255) cccccTGCAAT‑CCCAGTACGGCCATTCACCAATcc > 1:13455153/1‑35 (MQ=255) cccctgccgcagaagttgattgcgatggaacctcc > 1:10983670‑M2/1‑3 (MQ=255) cccctgccgcagaagttgattgcgatggaacctcc > 1:12878756‑M2/1‑3 (MQ=255) cccctgccacttcaccgtcggcgcgcatttcaata > 1:6222435‑M2/1‑3 (MQ=255) cccctgccacttcaccgtcggcgcgcatttcaata > 1:10809731‑M2/1‑3 (MQ=255) cccctgccaatgtcggatgcggtgcgagcgcctta > 1:11311602‑M2/1‑3 (MQ=255) ccccTGCcattgaaacggatcccggtgcaagtgcc < 1:17840025‑M1/35‑29 (MQ=255) ccccTGCcattgaaacggatcccggtgcaagtgcc < 1:18666712‑M1/35‑29 (MQ=255) ccctgccattcaacggttgaaaccagcctgctact > 1:16212311‑M2/1‑2 (MQ=255) ccctgccaatgtcggatgcggtgcgagcgccttat > 1:5950794‑M2/1‑2 (MQ=255) cctgccgcagaagttgattgcgatggaccctccat > 1:14411894‑M2/1‑1 (MQ=255) cctgccattcaacggttgaaaccagcctgctactg > 1:971121‑M2/1‑1 (MQ=255) cctgccattcaacggttgaaacaagcctgctactg > 1:5768226‑M2/1‑1 (MQ=255) cctgccacttcaccgtcggcgcgcatttcaatatc > 1:4516450‑M2/1‑1 (MQ=255) cctgccaatgtcggatgcggtgcgagcgccttatc > 1:14173342‑M2/1‑1 (MQ=255) cctgccaatgtcggatgcggtgcgagcgccttatc > 1:9149969‑M2/1‑1 (MQ=255) ccTGCcattgaaacggatcccggtgcaagtgcctt < 1:733857‑M1/35‑31 (MQ=255) ccTGCcattgaaacggatcccggtgcaagtgcctt < 1:908297‑M1/35‑31 (MQ=255) ccTGCcattgaaacggatcccggtgcaagtgcctt < 1:6349489‑M1/35‑31 (MQ=255) ccTGCcattgaaacggatcccggtgcaagtgcctt < 1:10238596‑M1/35‑31 (MQ=255) ccTGCcattgaaacggatccaggtgcaagtgcctt < 1:10419030‑M1/35‑31 (MQ=255) ccTCCAAT‑CCCAGTCCGGCCATTCACCAATCCCCt < 1:3731525/35‑1 (MQ=25) | GTGATGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCATTCACCAATCCCCT > REL606/3625422‑3625490 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |