New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2981401 | 48 (0.470) | 13 (0.170) | 5/36 | NT | 15.6% | coding (553/705 nt) | yggS | predicted enzyme |
? | REL606 | 3882315 = | 105 (1.360) | coding (103/816 nt) | atpB | F0F1 ATP synthase subunit A |
Only 100 of 121 total aligned reads displayed.
TGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGTAGCATTTGCCGGACTGAAAACGCGCTACCCGCA > REL606/2981367‑2981435 | tGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTG < 1:10906589‑M1/35‑1 (MQ=255) tGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTG > 1:12275016‑M1/1‑35 (MQ=255) tGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTG < 1:12199610‑M1/35‑1 (MQ=255) gTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGt < 1:5074947/35‑1 (MQ=255) gTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGt < 1:16758668/35‑1 (MQ=255) gTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGg > 1:18351706‑M1/1‑34 (MQ=255) gTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGg > 1:8228982‑M1/1‑34 (MQ=255) tAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGTa < 1:15506234/35‑1 (MQ=255) tAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGTa < 1:5903336/35‑1 (MQ=255) tAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGTa < 1:6654609/35‑1 (MQ=255) tAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGTa < 1:14367893/35‑1 (MQ=255) tcagCAGTTTGAAGTTGCACGCCAAATGGCTGTAg < 1:6126157/32‑1 (MQ=255) aaGGCAGTTTGAAGTTGCACGCCAAATGGCTGggg > 1:15692720‑M1/1‑32 (MQ=255) aaGGCAGTTTGAAGTTGCACGCCAAATGGCTGggg > 1:7053938‑M1/1‑32 (MQ=255) aaGGCAGTTTGAAGTTGCACGCCAAATGGCTGggg > 1:3045813‑M1/1‑32 (MQ=255) aaGGCAGTTTGAAGTTGCACGCCAAATGGCTGTAg < 1:18914806/35‑1 (MQ=255) aaGGCAGTTTGAAGTTGCACGCCAAATGGCTGTAg < 1:10251763/35‑1 (MQ=255) aGGCAGTTTGAAGTTGCACGCCAAATGGCTGgggg > 1:17873156‑M1/1‑31 (MQ=255) aGGCAGTTTGAAGTTGCACGCCAAATGGCTGgggg > 1:1597008‑M1/1‑31 (MQ=255) tctaGTTTGAAGTTGCACGCCAAATGGCTGTAGCa < 1:7086018/32‑1 (MQ=255) tctaGTTTGAAGTTGCACGCCAAATGGCTGTAGCa < 1:14739974/32‑1 (MQ=255) ggCAGTTTGAAGTTGCACGCCAAATGGCTGTAGCa < 1:1250807/35‑1 (MQ=255) ggCAGTTTGAAGTTGCACGCCAAATGGCTGTAGCa < 1:6512045/35‑1 (MQ=255) ggCAGTTTGAAGTTGCACGCCAAATGGCTGTAGCa < 1:13192063/35‑1 (MQ=255) ggCAGTTTGAAGTTGCACGCCAAATGGCTGTAGCa < 1:9184098/35‑1 (MQ=255) gCAGTTTGAAGTTGCACGCCAAATGGCTGgggggg > 1:8013564‑M1/1‑29 (MQ=255) gCAGTTTGAAGTTGCACGCCAAATGGCTGgggggg > 1:9435547‑M1/1‑29 (MQ=255) gCAGTTTGAAGTTGCACGCCAAATGGCTGTAGCAt < 1:17774285/35‑1 (MQ=255) gCAGTTTGAAGTTGCACGCCAAATGGCTGTAGCAt < 1:20241804/35‑1 (MQ=255) gCAGTTTGAAGATGCACGCCAAATGGCTGTAGCAt < 1:19928273/35‑1 (MQ=255) cAGTTTGAAGTTGCACGCCAAATGGCTGgggggtt > 1:15921627‑M1/1‑28 (MQ=255) cAGTTTGAAGTTGCACGCCAAATGGCTGgggggtt > 1:3783487‑M1/1‑28 (MQ=255) cAGTTTGAAGTTGCACGCCAAATGGCTGggggggt > 1:10205804‑M1/1‑28 (MQ=255) cAGTTTGAAGTTGCACGCCAAATGGCTGggggggt > 1:18458634‑M1/1‑28 (MQ=255) cAGTTTGAAGTTGCACGCCAAATGGCTGTAGCAtt < 1:3264418/35‑1 (MQ=255) cAGTTTGAAGTTGCACGCCAAATGGCTGTAGCAtt < 1:4480751/35‑1 (MQ=255) aGTTTGAAGTTGCACGCCAAATGGCTGgggggttt > 1:15471985‑M1/1‑27 (MQ=255) aGTTTGAAGTTGCACGCCAAATGGCTGgggggtgt > 1:4629848‑M1/1‑27 (MQ=255) aGTTTGAAGTTGCACGCCAAATGGCTGggggggtt > 1:176799‑M1/1‑27 (MQ=255) aGTTTGAAGTTGCACGCCAAATGGCTGggggggtt > 1:11617320‑M1/1‑27 (MQ=255) aGTTTGAAGTTGCACGCCAAATGGCTGTAGCAttt < 1:10245165/35‑1 (MQ=255) aGTTTGAAGTTGCACGCCAAATGGCTGTAGCAttt < 1:5862373/35‑1 (MQ=255) aGTTTGAAGTTGCACGCCAAATGGCTGTAGCAttt < 1:7478922/35‑1 (MQ=255) aGTTTGAAGTTGCACGCCAAATGGCTGTAGCAttt < 1:8292267/35‑1 (MQ=255) gTTTGAAGTTGCACGCCAAATGGCTGggggggttt > 1:9556537‑M1/1‑26 (MQ=255) gTTTGAAGTTGCACGCCAAATGGCTGggggggttg > 1:8515318‑M1/1‑26 (MQ=255) gTTTGAAGTTGCACGCCAAATGGCTGggggatttg > 1:8652427‑M1/1‑26 (MQ=255) gTTTGAAGTTGCACGCCAAATGGCTGTAGCATTTg < 1:2741393/35‑1 (MQ=255) gTTTGAAGTTGCACGACAAATGGCTGTAGCATTTg < 1:15686309/35‑1 (MQ=255) tttGAAGTTGCACGCCAAATGGCTGggggggtttt > 1:2631182‑M1/1‑25 (MQ=255) tttGAAGTTGCACGCCAAATGGCTGTAGCATTTGc < 1:8476241/35‑1 (MQ=255) tttGAAGTTGCACGCCAAATGGCTGTAGCATTTGc < 1:11724287/35‑1 (MQ=255) ttGAAGTCGCACGCCAAATGGCTGTAGCATTTGcc < 1:14853431/35‑1 (MQ=255) tGAAGTTGCACGCCAAATGGCTGggggggtttgtg > 1:3808703‑M1/1‑23 (MQ=255) gAAGTTGCACGCCAAATGGCTGTAGCATTTGCCgg < 1:17548249/35‑1 (MQ=255) gAAGTTGCACGCCAAATGGCTGTAGCATTTGCCgg < 1:8594575/35‑1 (MQ=255) aGTTGCACGCCAAATGGCTGTAGCATTTGCCGGAc < 1:5217613/35‑1 (MQ=255) gTTGCACGCCAAATGGCTGTAGCATTTGCCGGACt < 1:1002153/35‑1 (MQ=255) gTTGCACGCCAAATGGCTGTAGCATTTGCCGGACt < 1:12504016/35‑1 (MQ=255) tGCACGCCAAATGGCTGTAGCATTTGCCGGACTGa < 1:18275009/35‑1 (MQ=255) gCACGCCAAATGGCTGTAGCATTTGCCGGACTGaa < 1:10115391/35‑1 (MQ=255) gCACGCCAAATGGCTGTAGCATTTGCCGGACTGaa < 1:13644567/35‑1 (MQ=255) gCACGCCAAATGGCTGTAGCATTTGCCGGACTGaa < 1:15006036/35‑1 (MQ=255) cACGCCAAATGGCTGTAGCATTTGCCGGACTGaaa < 1:20587428/35‑1 (MQ=255) cACGCCAAATGGCTGTAGCATTTGCCGGACTGaaa < 1:11320891/35‑1 (MQ=255) aCGCCAAATGGCTGTAGCATTTGCCGGACTGaaaa < 1:13705050/35‑1 (MQ=255) cGCCAAATGGCTGTAGAATTTGCCGGACTGAAAAc < 1:3352907/35‑1 (MQ=255) ccAAATGGCTGTAGCATTTGCCGGACTGAAAAcgc < 1:1199631/35‑1 (MQ=255) cAAATGGCTGTAGCATTTGCCGGACTGAAAAcgcg < 1:331417/35‑1 (MQ=255) cAAATGGCTGTAGCATTTGCCGGACTGAAAAcgcg < 1:14647207/35‑1 (MQ=255) gaaTGGATGTAGCATTTGCCGGACTGAAAACgcgc < 1:5771126/34‑1 (MQ=255) aaaTGTCTGTAGCATTTGCCGGACTGAAAACgcgc > 1:2214756/1‑35 (MQ=255) aaaTGGCTGTAGCATTTGCCGGACTGAAAACgcgc < 1:4279125/35‑1 (MQ=255) aaaTGGCTGTAGCATTTGCCGGACTGAAAACgcgc < 1:5381150/35‑1 (MQ=255) aaTGGCTGTAGCATTTGCCGGACTGAAAACGCGCt < 1:19604604/35‑1 (MQ=255) aaTGGCTGTAGCATTTGCCGGACTGAAAACGCGCt < 1:4369978/35‑1 (MQ=255) aaTGGCTGTAGCATTTGCCGGACTGAAAACGAGCt < 1:18065176/35‑1 (MQ=255) tGGCTGTAGCATTTGCCGGACTGAAAACGCGCTAc < 1:16851034/35‑1 (MQ=255) gCTGTAGCATTTGCCGGACTGAAAACGCGCTAccc > 1:19514061/1‑35 (MQ=255) gCTGTAGCATTTGCCGGACTGAAAACGCGCTAccc < 1:8217092/35‑1 (MQ=255) gCTGTAGCATTTGCAGGACTGAAAACGCGCTAccc < 1:11184740/35‑1 (MQ=255) cTGTAGCATTTGCCGGACTGAAAACGCGCTACCCg > 1:14772986/1‑35 (MQ=255) cTGTAGCATTTGCCGGACTGAAAACGCGCTACCCg > 1:17813967/1‑35 (MQ=255) cTGTAGCATTTGCCGGACTGAAAACGCGCTACCCg < 1:14259583/35‑1 (MQ=255) cTGTAGCATTTGCCGGACTGAAAACGCGCTACCCg > 1:20496091/1‑35 (MQ=255) cTGTAGCATTTGCCGGACTGAAAACGCGCTACCCg < 1:3780810/35‑1 (MQ=255) cTGTAGCATTTGCCGGACTGAAAACGCGCTACCCg > 1:3068643/1‑35 (MQ=255) tGTAGCATTTGCCGGACTGAAAACGCGCTACCCGc < 1:10855238/35‑1 (MQ=255) tGTAGCATTTGCCGGACTGAAAACGCGCTACCCGc > 1:1112849/1‑35 (MQ=255) tGTAGCATTTGCCGGACTGAAAACGCGCTACCCGc < 1:8517268/35‑1 (MQ=255) tGTAGCATTTGCCGGACTGAAAACGCGCTACCCGc > 1:15308288/1‑35 (MQ=255) tGTAGCATTTGCCGGACTGAAAACGCGCTACCCGc < 1:4824149/35‑1 (MQ=255) tGTAGCATTTGCCGGACTGAAAACGCGCTACCCGc < 1:4730313/35‑1 (MQ=255) gTAGCATTTTCCGGACTGAAAACGCGCTACCCGCa > 1:535988/1‑35 (MQ=255) gTAGCATTTGCCGGACTGAAAACGCGCTACCCGCa > 1:14181467/1‑35 (MQ=255) gTAGCATTTGCCGGACTGAAAACGCGCTACCCGCa > 1:3455033/1‑35 (MQ=255) gTAGCATTTGCCGGACTGAAAACGCGCTACCCGCa < 1:14222347/35‑1 (MQ=255) gTAGCATTTGCCGGACTGAAAACGCGCTACCCGCa > 1:7042975/1‑35 (MQ=255) gTAGCATTTGCCGGACTGAAAACGCGCTACCCGCa > 1:15811471/1‑35 (MQ=255) gTAGCATTTGCCGGACTGAAAACGCGCTACCCGCa > 1:911375/1‑35 (MQ=255) | TGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGTAGCATTTGCCGGACTGAAAACGCGCTACCCGCA > REL606/2981367‑2981435 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |