New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 756509 | 64 (0.620) | 16 (0.210) | 4/36 | NT | 23.0% | coding (475/693 nt) | tolQ | membrane spanning protein in TolA‑TolQ‑TolR complex |
? | REL606 | 1539626 = | 59 (0.770) | coding (46/2400 nt) | dos | cAMP phosphodiesterase, heme‑regulated |
Only 100 of 181 total aligned reads displayed.
AACACCGCGCCCATCATATTTTGTTCAAGGGCGGGGAAAAAAATGCCATCGGC‑GGCATTTTCCGCATCG > REL606/1539592‑1539660 | tctgcggtcttgcgatgtttgttgtagctGGGggg < 1:8239174‑M1/6‑1 (MQ=255) gggatcatgcacgcctttatcgccctcggggcggg > 1:4816494‑M2/35‑35 (MQ=255) gggatcatgcacgcctttatcgccctcggggcggg > 1:11980529‑M2/35‑35 (MQ=255) gggatcatgcacgcctttatcgccctcggggcggg > 1:18112307‑M2/35‑35 (MQ=255) gccgggctggactcttcccaggggccaacGGCggg < 1:14369371‑M1/6‑1 (MQ=255) aaCACCGCGCCCATCATATTTTGTTCAAGGGCggg > 1:1833888/1‑35 (MQ=255) aaCACCGCGCCCATCATATTTTGTTCAAGGGCggg > 1:17536742/1‑35 (MQ=255) aaCACCGAGCCCATCATATTTTGTTCAAGGGCggg < 1:1214377/35‑1 (MQ=255) ggatcatgcacgcctttatcgccctcggggcgggg > 1:11223072‑M2/34‑35 (MQ=255) ggatcatgcacgcctttatcgccctcggggcgggg > 1:13708483‑M2/34‑35 (MQ=255) ctgcggtcttgcgatgtttgttgtagctGGGgggg < 1:11706906‑M1/7‑1 (MQ=255) ccgggctggactcttcccaggggccaacGGcgggc < 1:19832829‑M1/7‑2 (MQ=255) ccgggctggactcttcccaggggccaacGGCgggg < 1:7921637‑M1/7‑1 (MQ=255) ccgggctggactcttcccaggggccaacGGCgggg < 1:2004507‑M1/7‑1 (MQ=255) acacCGCGCCCATCATATTTTGTTCAAGGGCgggg > 1:19560505/1‑35 (MQ=255) acacCGCGCCCATCATATTTTGTTCAAGGGCgggg > 1:17976208/1‑35 (MQ=255) acacCGCGCCCATCATATTTTGTTCAAGGGCgggg > 1:10089225/1‑35 (MQ=255) tgcggtcttgcgatgtttgttgtagctGGCGGGGa < 1:20335024‑M1/8‑1 (MQ=255) cgggctggactcttcccaggggccaacGGCGGGGa < 1:17185309‑M1/8‑1 (MQ=255) gggctggactcttcccaggggccaacGgcggggga < 1:14740056‑M1/9‑3 (MQ=255) atcatgcacgcctttatcgccctcggggcggGGaa > 1:15565978‑M2/32‑35 (MQ=255) acCGCGCCCATCATATTTTGTTCAAGGGCGGGGaa > 1:7705369/1‑35 (MQ=255) acCGCGCCCATCATATTTTGTTCAAGGGCGGGGaa > 1:4471284/1‑35 (MQ=255) tcatgcacgcctttatcgccctcggggcggGaaag > 1:748425‑M2/31‑34 (MQ=255) cggtcttgcgatgtttgttgtagctGGCGGGGaaa < 1:3719947‑M1/10‑1 (MQ=255) ggtcttgcgatgtttgttgtagctGGCGgggacaa < 1:5036058‑M1/11‑4 (MQ=255) ggtcttgcgatgtttgttgtagctGGCGGggaaca < 1:1219349‑M1/11‑3 (MQ=255) ggtcttgcgatgtttgttgtagctGGCGGGGaaaa < 1:6266175‑M1/11‑1 (MQ=255) ggtcttgcgatgtttgttgtagctGGCGGGGaaaa < 1:9391261‑M1/11‑1 (MQ=255) gctggactcttcccaggggccaacGGCGGGGgaaa < 1:2147787‑M1/11‑1 (MQ=255) cgcgCCCATCATATTTTGTTCAAGGGCGGGGaaaa < 1:6995696/35‑1 (MQ=255) catgcacgcctttatctccctcggggcggGGaaaa > 1:4059524‑M2/30‑35 (MQ=255) catgcacgcctttatcgccctcggggcggGgaaac > 1:20476655‑M2/30‑34 (MQ=255) attttggatctttgtgccgcccccGGCGGGGaaaa < 1:2635236‑M1/11‑1 (MQ=255) ttttggatctttgtgccgcccccGGCGGGGaaaaa < 1:16223364‑M1/12‑1 (MQ=255) gcgcCCATCATATTTTGTTCAAGGGCGGGGaaaaa < 1:9072223/35‑1 (MQ=255) ctggactcttcccaggggccaacGGCGGGGaaaaa < 1:2207069‑M1/12‑1 (MQ=255) atgcacgcctttatcgccctcggggcggggaaaca > 1:8902588‑M2/29‑33 (MQ=255) atgcacgcctttatcgccctcggggcggGGaaaaa > 1:16701578‑M2/29‑35 (MQ=255) atgcacgcctttatcgccctcggggcggGGaaaaa > 1:8496589‑M2/29‑35 (MQ=255) tttggatctttgtgccgcccccGGCGgggaaacaa < 1:15364491‑M1/13‑4 (MQ=255) tttggatctttgtgccgcccccGGCGGGGaaaaaa < 1:527614‑M1/13‑1 (MQ=255) tttggatctttgtgccgcccccGGCGGGGaaaaaa < 1:20202255‑M1/13‑1 (MQ=255) tggactcttcccaggggccaacGGCGgggaaataa < 1:17159259‑M1/13‑4 (MQ=255) tgcacgcctttatcgccctcggggcggGGgaaaaa > 1:3153834‑M2/28‑35 (MQ=255) tcttgcgatgtttgttgtagctGGCGGGGaaaaaa < 1:2796183‑M1/13‑1 (MQ=255) cgcCCATCATATTTTGTTCAAGGGCGGGGaaaaaa > 1:18159108/1‑35 (MQ=255) cgcCCATCATATTTTGTTCAAGGGCGGGGaaaaaa > 1:2452290/1‑35 (MQ=255) ggactcttcccagtggccaacGGCGGGGaaaaaaa < 1:5902689‑M1/14‑1 (MQ=255) ggactcttcccaggggccaacGGCGGggaaaaaca < 1:13282931‑M1/14‑3 (MQ=255) gcacgcctttatcgccctcggggcggGGaaaaaaa > 1:2703605‑M2/27‑35 (MQ=255) gcCCATCATATTTTGTTCAAGGGCGGGGaaaaaaa < 1:15721695/35‑1 (MQ=255) gcCCATCATATTTTGTTCAAGGGCGGGGaaaaaaa > 1:16397055/1‑35 (MQ=255) gcCCATCATATTTTGTTCAAGGGCGGGGaaaaaaa > 1:20457082/1‑35 (MQ=255) gcCCATCATATTTTGTTCAAGGGCGGGGaaaaaaa > 1:5455849/1‑35 (MQ=255) cttgcgatgtttgttgtagctGGCGGGggaaaaag < 1:10754952‑M1/14‑2 (MQ=255) ttgcgatgtttgttgtagctGGCGGGgaaaaaaag < 1:17465494‑M1/15‑2 (MQ=255) ttgcgatgtttgttgtagctGGCGGGgaaaaaaac < 1:10951186‑M1/15‑2 (MQ=255) cccATCATATTTTGTTCAAGGGCGGGGAAAAAAAt < 1:3990717/35‑1 (MQ=255) cacgcctttatcgccctcggggcggGgaaaaaaaa > 1:15051438‑M2/26‑34 (MQ=255) cacgcctttatcgccctcggggcggGaaaaaaaac > 1:16779729‑M2/26‑34 (MQ=255) tgcgatgtttgttgtagctGGCGGggaaaaaaagg < 1:14322535‑M1/16‑3 (MQ=255) ggatctttgtgccgcccccGGCGGggaaaaaaagc < 1:13586159‑M1/16‑3 (MQ=255) ccATCATATTTTGTTCAAGGGCTGGGAAAAAAATg > 1:20106201/1‑35 (MQ=255) actcttcccaggggccaacGGCGGggaaaaaaaat < 1:12168449‑M1/16‑3 (MQ=255) acgcctttatcgccctcggggcggggaaaaaaaca > 1:12542969‑M2/25‑33 (MQ=255) acgcctttatcgccctcggggcggggaaaaaaaaa > 1:16835855‑M2/25‑33 (MQ=255) catcatATTTTGTTCAAGGGCGGGGAAAAAAATGc < 1:11611755/35‑1 (MQ=255) catcatATTTTGTTCAAGGGCGGGGAAAAAAATGc > 1:13455611/1‑35 (MQ=255) catcatATTTTGTTCAAGGGCGGGGAAAAAAATGc > 1:4248002/1‑35 (MQ=255) catcatATTTTGTTCAAGGGCGGGGAAAAAAATGc < 1:4456135/35‑1 (MQ=255) catcatATTTTGTTCAAGGGCGGGGAAAAAAATGc < 1:15199588/35‑1 (MQ=255) tcttcccaggggccaacGGCGGGGAAAAaaatttt < 1:9660419‑M1/18‑4 (MQ=255) atcatATTTTGTTCAATGGCGGGGGAAAAAAAGcc > 1:15513426/1‑35 (MQ=25) atcatATTTTGTTCAAGGGCGGGGAAAAAAATGcc > 1:19763218/1‑35 (MQ=255) atcatATTTTGTTCAAGGGCGGGGAAAAAAATGcc < 1:17741803/35‑1 (MQ=255) tcatATTTTGTTCAAGGGCGGGGAAAAAAATGCCa > 1:19144364/1‑35 (MQ=255) catATTTTGTTCAAGGGCGGGGAAAAAAATGCCAt > 1:7045781/1‑35 (MQ=255) catATTTTGTTCAAGGGCGGGGAAAAAAATGCCAt < 1:6936153/35‑1 (MQ=255) catATTTTGTTCAAGGGCGGGGAAAAAAATGCCAt > 1:13819810/1‑35 (MQ=255) catATTTTGTTCAAGGGCGGGGAAAAAAATGCCAt > 1:9372675/1‑35 (MQ=255) catATTTTGTTCAAGGGCGGGGAAAAAAATGCCAt < 1:9729950/35‑1 (MQ=255) catATTTTGTTCAAGGGCGGGGAAAAAAATGCCAt > 1:6634371/1‑35 (MQ=255) catATTTTGTTCAAGGGCGGGGAAAAAAATGCCAt > 1:6475746/1‑35 (MQ=255) atatTTTGTTCAAGGGCGGGGAAAAAAATGCCATc > 1:2833314/1‑35 (MQ=255) atTTTGTTCAAGGGCGGGGAAAAAAATGCCATcgg < 1:8187857/35‑1 (MQ=255) ttttGTTCAAGGGCGGGGAAAAAAATGCCATcggc < 1:13164812/35‑1 (MQ=255) ttttGTTCAAGGGCGGGGAAAAAAATGCCATcggc > 1:8571228/1‑35 (MQ=255) tttGTTCAAGGGCGGGGAAAAAAATGCCATcggc‑g < 1:18742053/35‑1 (MQ=255) ttGTTCAAGGGCGGGGAAAAAAATGCCATcggc‑gg < 1:3517030/35‑1 (MQ=255) tGTTCAAGGGCGGGGAAAAAAATGCCATcggc‑ggg > 1:20610411/1‑34 (MQ=255) tGTTCAAGGGCGGGGAAAAAAATGCCATcggc‑ggg > 1:14128541/1‑34 (MQ=255) gTTCAAGGGCGGGGAAAAAAATGCCATcggc‑gggg > 1:10201887/1‑33 (MQ=255) aGGGCGGGGAAAAAAATGCCATCGGC‑GGCATTTTc < 1:13983234/35‑1 (MQ=255) ggCGGGGAAAAAAATGCCATCGGCGGGCCTTTTcc > 1:11785970/1‑35 (MQ=25) GGCGGGGAAAAAAATGCCATCGGC‑GGCATTTTCCg > 1:19486393‑M1/1‑35 (MQ=255) GGCGGGGAAAAAAATGCCATCGGC‑GGCATTTTCCg > 1:5736683‑M1/1‑35 (MQ=255) CGGGGAAAAAAATGCCATCGGC‑GGCATTTTCCGCa > 1:16585281‑M1/1‑35 (MQ=255) GGGAAAAAAATGCCATCGGC‑GGCATTTTCCGCATc > 1:9086103‑M1/1‑35 (MQ=255) ggAAAAAAATGCCATCGGC‑GGCATTTTCCGCATCg < 1:2985310/35‑1 (MQ=255) | AACACCGCGCCCATCATATTTTGTTCAAGGGCGGGGAAAAAAATGCCATCGGC‑GGCATTTTCCGCATCG > REL606/1539592‑1539660 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |