New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2530544 | 66 (0.640) | 11 (0.120) | 5/42 | NT | 18.2% | coding (1232/1668 nt) | hyfG | hydrogenase 4, subunit |
? | REL606 | 3367495 = | 41 (0.460) | intergenic (‑81/+26) | yhdN/rplQ | hypothetical protein/50S ribosomal protein L17 |
Only 100 of 121 total aligned reads displayed.
AATATTCCAAAAACACTGTTTACCTTTACCGGCGGCGATGTTTTCTCCCGCGTGATGGTCCGTGTCAAA > REL606/2530510‑2530578 | aaTATTCCAAAAACACTGTTTACCTTTACCGGCGG > 1:5327479‑M1/1‑35 (MQ=255) aaTATTCCAAAAACACTGTTTACCTTTACCGGCGG > 1:2718530‑M1/1‑35 (MQ=255) atatTCCAAAAACACTGTTTACCTTTACCggcggc < 1:14315619/35‑1 (MQ=255) atatTCCAAAAACACTGTTTACCTTTACCggcggc < 1:14260770/35‑1 (MQ=255) atatTCCAAAAACACTGTTTACCTTTACCGGCGGg > 1:17161321‑M1/1‑34 (MQ=255) atatTCCAAAAACACTGTTTACCTTTACCGGCGGg > 1:3097882‑M1/1‑34 (MQ=255) tatTCCAAAAACACTGTTTACCTTTACCGgcggcg < 1:20067734/35‑1 (MQ=255) tatTCCAAAAACACTGTTTACCTTTACCGGCGGgg > 1:19648369‑M1/1‑33 (MQ=255) tatTCCAAAAACACTGTTTACCTTTACCGGCGGgg > 1:13093636‑M1/1‑33 (MQ=255) tatTCCAAAAACACTGTTTACCTTTACCGGCGGgg > 1:2600791‑M1/1‑33 (MQ=255) tatTCCAAAAACACTGTTTACCTTTACCGGCGGgg > 1:4440412‑M1/1‑33 (MQ=255) atTCCAAAAACACTGTTTACCTTTACCGgcggcgg > 1:12798377/1‑34 (MQ=255) ttCCAAAAACACTGTTTACCTTTACCGGCGGgggg > 1:15732245‑M1/1‑31 (MQ=255) ttCCAAAAACACTGTTTAACTTTACCGGCGGCGAt < 1:8545274/35‑1 (MQ=255) tCCAAAAACACTGTTTACCTTTACCGGCGGggggg > 1:16011278‑M1/1‑30 (MQ=255) tCCAAAAACACTGTTTACCTTTACCGGCGGggggg > 1:18331714‑M1/1‑30 (MQ=255) tCCAAAAACACTGTTTACCTTTACCGGCGGCGATg < 1:2633030/35‑1 (MQ=255) tCCAAAAACACTGTTTACCTTTACCGGCGGCGATg < 1:683574/35‑1 (MQ=255) tCCAAAAACACTGTTTACCTTTACCGGCGGCGATg < 1:15399800/35‑1 (MQ=255) cAAAAACACTGTTTACCTTTACCGGCGGggggggg > 1:5486297‑M1/1‑28 (MQ=255) cAAAAACACTGTTTACCTTTACCGGCGGCGATGtt < 1:14570809/35‑1 (MQ=255) aaaaaCACTGTTTACCTTTACCGGCGGggggggtt > 1:10296251‑M1/1‑27 (MQ=255) aaaaCACTGTTTACCTTTACCGGCGTCGATGtttt > 1:5286947/1‑35 (MQ=255) aaaaCACTGTTTACCTTTACCGGCGGggggggttt > 1:18643198‑M1/1‑26 (MQ=255) aaaaCACTGTTTACCTTTACCGGCGGggggggttt > 1:1231938‑M1/1‑26 (MQ=255) aaaaCACTGTTTACCTTTACCGGCGGCGATGtttt < 1:969828/35‑1 (MQ=255) aaaaCACTGTTTACCTTTACCGGCGGCGATGtttt < 1:3746724/35‑1 (MQ=255) aaaCACTGTTTACCTTTACCGGCGTCGATGTTTtc > 1:17962962/1‑35 (MQ=255) aaCACTGTTTACCTTTGCCGGCGGCGATGTTTtct < 1:17838745/35‑1 (MQ=255) aaCACTGTTTACCTTTACCGGCGGCGATGTTTtct < 1:3672914/35‑1 (MQ=255) aaCACTGTTTACCTTTACCGGCGGCGATGTTTtct < 1:5841684/35‑1 (MQ=255) aaCACTGTTTACCTTTACCGGCGGCGATGTTTtct < 1:17198783/35‑1 (MQ=255) aaCACTGTTTACCTTTACCGGCGGCGATGTTTtct < 1:1806876/35‑1 (MQ=255) aaCACTGTTTACCTTTACCGGCGGCGATGTTTtct < 1:3690880/35‑1 (MQ=255) acacTGTTTACCTTTACCGGCGGggggggtttttt > 1:9087393‑M1/1‑23 (MQ=255) acacTGTTTACCTTTACCGGCGGCGATGTTTtctc < 1:16097133/35‑1 (MQ=255) cacTGTTTACCTTTACCGGCGGggggggttttttt > 1:7519609‑M1/1‑22 (MQ=255) cacTGTTTACCTTTACCGGCGGCGATGTTTTCTcc < 1:15433296/35‑1 (MQ=255) cacTGTTTACCTTTACCGGCGGCGATGTTTTCTcc < 1:9234361/35‑1 (MQ=255) acTGTTTGCCTTTACCGGCGGCGATGTTTTCTccc < 1:2093393/35‑1 (MQ=255) acTGTTTACCTTTACCGGCGGggggggtttttttc > 1:18464954‑M1/1‑21 (MQ=255) acTGTTTACCTTTACCGGCGGggggggtttttttc > 1:4099871‑M1/1‑21 (MQ=255) acTGTTTACCTTTACCGGCGGCGATGTTTTCTcct < 1:18860931/35‑2 (MQ=255) acTGTTTACCTTTACCGGCGGCGATGTTTTCTccc < 1:12872563/35‑1 (MQ=255) acTGTTTACCTTTACCGGCGGCGATGTTTTCTccc < 1:13486692/35‑1 (MQ=255) acTGTTTACCTTTACCGGCGGCGATGTTTTCTccc < 1:15381042/35‑1 (MQ=255) cTGTTTACCTTTACCGGCGGGGGGGGTTtctctcc > 1:6068648/1‑32 (MQ=12) cTGTTTACCTTTACCGGCGGCGATGTTTTCTCCcg < 1:20328918/35‑1 (MQ=255) cTGTTTACCTTTACCGGCGGCGATGTTTTCTCCcg < 1:6899101/35‑1 (MQ=255) cTGATTACCTTTACCGGCGGCGATGTTTTCTCCcg < 1:3795162/35‑1 (MQ=255) tGTTTACCTTTACCGGCGGGGGGGTTTTTTccctt > 1:9769776/1‑33 (MQ=16) tGTTTACCTTTACCGGCGGCGATGTTTTCTCCcgc < 1:6285956/35‑1 (MQ=255) tGTTTACCTTTACCGGCGGCGATGTTTTCTCCcgc < 1:16162209/35‑1 (MQ=255) gTTTACCTTTACCGGCGGCGATGTTTTCTCCcgcg < 1:19289366/35‑1 (MQ=255) gTTTACCTTTACCGGCGGCGATGTTTTCTCCcgcg < 1:18076801/35‑1 (MQ=255) tttacctttaccGGCGGCGATGTTTTCTCCCGCGt < 1:3904234/35‑1 (MQ=255) tttacctttaccGGCGGCGATGTTTTCTCCCGCGt < 1:10129541/35‑1 (MQ=255) tttacctttaccGGCGGCGATGTTTTCTCCCGCGt < 1:11586061/35‑1 (MQ=255) ttacctttaccGGCGGCGATGTTTTCTCCCGCGTg < 1:3297405/35‑1 (MQ=255) ccctgtaccGGCGGCGATGTTTTCTCCCGCGTGAt < 1:4126553/34‑1 (MQ=255) acctttaccGGCGGCGATGTTTTCTCCCGCGTGAt < 1:16653129/35‑1 (MQ=255) cctttaccGGCGGCGATGTTTTCTCCCGCGTGATg < 1:8771743/35‑1 (MQ=255) cctttaccGGCGGCGATGTTTTCTCCCGCGTGATg < 1:8078158/35‑1 (MQ=255) cctttaccGGCGGCGATGTTTTCTCCCGCGTGATg < 1:19395437/35‑1 (MQ=255) ctttagcGGCGGCGATGTTTTCTCCCGCGTGATgg < 1:3122355/35‑1 (MQ=255) ctttaccGGCGGCGATGTTTTCTCCCGCGTGATgg < 1:8173369/35‑1 (MQ=255) ctttaccGGCGGCGATGTTTTCTCCCGCGTGATgg < 1:10943259/35‑1 (MQ=255) ctttaccGGCGGCGATGTTTTCTCCCGCGTGATgg < 1:7763318/35‑1 (MQ=255) tttaccGGCGGCGATGTTTTCTCCCGCGTGATGGt < 1:5485388/35‑1 (MQ=255) tttaccGGCGGCGATGTTTTCTCCAGCGTGATGGt < 1:2416357/35‑1 (MQ=255) taccGGCGGCGATGTTTTCTCCCGCGTGATGGTcc < 1:9876752/35‑1 (MQ=255) gcccGGCGGCGAGGTTTGCTCCCGCGTGATGGTcc < 1:17913213/33‑1 (MQ=25) accGGCGGCGATGTTTTCTCCCGCGTGATGGTCCg < 1:12878160/35‑1 (MQ=255) accGGCGGCGATGTTTTCTCCCGCGTGATGGTCCg < 1:13895115/35‑1 (MQ=255) accGGCGGCGATGTTTTCTACCGCGTGATGGTCCg < 1:10684118/35‑1 (MQ=255) ccGGCGGCGATGTTTTCTCCCGCGTGATGGTCCgt < 1:12914733/35‑1 (MQ=255) ccGGCGGCGATGTTTTCTCCCGCGTGATGGTCCgt < 1:8132811/35‑1 (MQ=255) ccGGCGGCGATGTTTTCTCCCGCGTGATGGTCCgt < 1:754648/35‑1 (MQ=255) ccGGCGGCGATGTTTTCTCCCGCGTGATGGTCCgt < 1:6761504/35‑1 (MQ=255) ccGGCGGCGATGTTTTCTCCCGCGTGATGGTCCgt < 1:5143822/35‑1 (MQ=255) ccGGCGGCGATGTTTTCTCCCGCGTGATGGTCCgt < 1:5912776/35‑1 (MQ=255) ccGGCGGCGATGTTTTCTCCCGCGTGATGGTCCgt < 1:2277490/35‑1 (MQ=255) ccGGCGGCGATGTTTTCTCCCGCGTGATGGTCCgt < 1:6266717/35‑1 (MQ=255) cggcggCGATGTTTTCTCCCGCGTGATGGTCCgtg < 1:10681538/35‑1 (MQ=255) cggcggCGATGTTTTCTCCCGCGTGATGGTCCgtg < 1:15804110/35‑1 (MQ=255) gcggcgATGTTTTCTCCCGCGTGATGGTCCGTGTc < 1:17245368/35‑1 (MQ=255) cggcgATGTTTTCTCCCGCGTGATGGTCCGTGTCa < 1:11323972/35‑1 (MQ=255) cggcgATGTTTGCTCCCGCGTGATGGTCCGTGTCa < 1:14889840/35‑1 (MQ=255) ggcgATGTTTTCTCCCGCGTGATGGTCCGTGTCaa < 1:896481/35‑1 (MQ=255) ggcgATGTTTTCTCCCGCGTGATGGTCCGTGTCaa < 1:5396566/35‑1 (MQ=255) ggcgATGTTTTCTCCCGCGTGATGGTCCGTGTCaa > 1:4197169/1‑35 (MQ=255) ggcgATGTTTTCTCCCGCGTGATGGTCCGTGTCaa < 1:16726360/35‑1 (MQ=255) gcgATGTTTTCTCCCGCGTGATGGTCCGTGTCaaa > 1:817789/1‑35 (MQ=255) gcgATGTTTTCTCCCGCGTGATGGTCCGTGTCaaa < 1:12113138/35‑1 (MQ=255) gcgATGTTTTCTCCCGCGTGATGGTCCGTGTCaaa > 1:3184690/1‑35 (MQ=255) gcgATGTTTTCTCCCGCGTGATGGTCCGTGTCaaa < 1:11810353/35‑1 (MQ=255) gcgATGTTTTCTCCCGCGTGATGGTCCGTGTCaaa < 1:9546205/35‑1 (MQ=255) gcgATGTTTTCTCCCGCGTGATGGTCCGTGTCaaa < 1:4977966/35‑1 (MQ=255) gcgATGTTTTCTCCCGCGTGATGGTCCGTGTCaaa > 1:7102513/1‑35 (MQ=255) gcgATGTTTTCTCCCGCGTGATGGTCCGTGTCaaa > 1:6910437/1‑35 (MQ=255) | AATATTCCAAAAACACTGTTTACCTTTACCGGCGGCGATGTTTTCTCCCGCGTGATGGTCCGTGTCAAA > REL606/2530510‑2530578 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |