Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 4,110,237 IS150 (–) +3 bp 100% coding (296‑298/2433 nt) metL → bifunctional aspartate kinase II/homoserine dehydrogenase II

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 3893554 =NA (NA)139 (1.480) 43/44 NT 100% noncoding (1/1443 nt) IS150 repeat region
?REL606 4110237 = 0 (0.000)coding (296/2433 nt) metL bifunctional aspartate kinase II/homoserine dehydrogenase II
* ? REL606 = 3894996NA (NA)79 (0.770) 28/48 NT 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 = 4110239 0 (0.000)coding (298/2433 nt) metL bifunctional aspartate kinase II/homoserine dehydrogenase II

Only 100 of 131 total aligned reads displayed.

GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/3894963‑3894996
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAATGAGGCTATCGGCTTCTTCAGCGGGTAGCAG  <  REL606/4110239‑4110206
                                                                    
GTGTTTAACTGTCCAACTTTTTGTGGTCAGTACAT                                   >  1:6145869/1‑35
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT                                   >  1:15886101/1‑35
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT                                   <  1:8485161/35‑1
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT                                   <  1:2199283/35‑1
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT                                   >  1:8338823/1‑35
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT                                   <  1:3427745/35‑1
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT                                   <  1:3834127/35‑1
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT                                   >  1:13944173/1‑35
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT                                   <  1:4015528/35‑1
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT                                   <  1:19571347/35‑1
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAT                                   >  1:12685526/1‑35
 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATg                                  <  1:5067116/35‑2
 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATA                                  <  1:8276837/35‑1
  GTTTAACTGTCCAACTTTTTTGGGTCAGTACATAA                                 >  1:14791968/1‑35
  GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA                                 <  1:20518981/35‑1
  GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA                                 >  1:13031370/1‑35
  GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA                                 >  1:16153077/1‑35
  GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA                                 >  1:20375474/1‑35
  GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA                                 >  1:17744236/1‑35
  GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA                                 <  1:13973185/35‑1
  GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA                                 <  1:14622383/35‑1
  GTTTAACTGTCCAACTTTTTGGGGTCAGTACATAA                                 >  1:7955961/1‑35
   TTTAACTGTCCAACTTTTTGGGGTCAGTACATAtt                                <  1:13091003/35‑3
   TTTAACTGTCCAACTTTTTGGGGTCAGTACATAAT                                >  1:11627023/1‑35
    TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG                               <  1:1585018/35‑1
    TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG                               <  1:17423695/35‑1
    TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG                               >  1:3871059/1‑35
    TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG                               <  1:7902151/35‑1
    TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG                               <  1:18133471/35‑1
    TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG                               <  1:5282535/35‑1
    TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG                               >  1:5366118/1‑35
    TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG                               >  1:18029835/1‑35
    TTAACTGTCCAACTTTTTGGGGTCAGTACATAATG                               >  1:12775706/1‑35
     TAACTGTCCAACTTTTTGGGGTCAGTACATAATGA                              <  1:14936942/35‑1
      AACTGTCCAACTTTTTGGGGTCAGTACATAATGAG                             >  1:19429098/1‑35
      AACTGTCCAACTTTTTGGGGTCAGTACATAATGAG                             <  1:19380247/35‑1
      AACTGTCCAACTTTTTGGGGTCAGTACATAATGAG                             <  1:13655515/35‑1
      AACTGTCCAACTTTTTGGGGTCAGTACATAATGAG                             >  1:10408996/1‑35
       ACTGTCCAACTTTTTGGGGTCAGTACATAATGAGG                            <  1:15810312/35‑1
       ACTGTCCAACTTTTTGGGGTCAGTACATAATGAGG                            <  1:2576815/35‑1
        CTGTCCAACTTTTTGGGGTCAGTACATAATGAGGC                           >  1:20144540/1‑35
        CTGTCCAACTTTTTGGGGTCAGTACATAATGAGGC                           <  1:14775945/35‑1
        CTGTCCAACTTTTTGGGGTCAGTACATAATGAGGC                           >  1:7004601/1‑35
        CTGTCCAACTTTTTGGGGTCAGTACATAATGAGGC                           >  1:19513236/1‑35
        CTGTCCAACTTTTTGGGGTCAGTACATAATGAGGC                           <  1:910161/35‑1
          GTCCAACTTTTTGGGGTCAGTACATAATGAGGCTA                         <  1:15030884/35‑1
          GTCCAACTTTTTGGGGTCAGTACATAATGAGGCTA                         >  1:2824711/1‑35
          GTCCAACTTTTTGGGGTCAGTACATAATGAGGCTA                         <  1:17009835/35‑1
          GTCCAACTTTTTGGGGTCAGTACATAATGAGGCTA                         >  1:12843745/1‑35
          GTCCAACTTTTTGGGGTCAGTACATAATGAGGCTA                         >  1:6167567/1‑35
          GTCCAACTTTTTGGGGTCAGTACATAATGAGGCTA                         <  1:20070594/35‑1
           TCCAACTTTTTGGGGTCAGTAGATAATGAGGCTAT                        <  1:10235729/35‑1
           TCCAACTTTTTGGGGTCAGTACATAATGAGGCTAc                        >  1:20325980/1‑34
           TCCAACTTTTTGGGGTCAGTACATAATGAGGCTAa                        >  1:11259304/1‑34
           TCCAACTTTTTGGGGTCAGTACATAATGAGGCTAT                        <  1:13149184/35‑1
           TCCAACTTTTTGGGGTCAGTACATAATGAGGCTAT                        <  1:1669588/35‑1
            CCAACTTTTTGGGGTCAGTACATAATGAGGCTAaa                       >  1:9227780/1‑33
             CAACTTTTTGGGGTCAGTACATAATGAGGCTAaaa                      >  1:3131777/1‑32
             CAACTTTTTGGGGTCAGTACATAATGAGGCTATCG                      >  1:135739/1‑35
             CAACTTTTTGGGGTCAGTACATAATGAGGCTATCG                      >  1:2301758/1‑35
              AACTTTTTGGGGTCAGTACATAATGAGTCTATCGG                     >  1:14493390/1‑35
              AACTTTTTGGGGTCAGTACATAATGAGGCTATCGG                     <  1:19068675/35‑1
              AACTTTTTGGGGTCAGTACATAATGAGGCTATCGG                     <  1:7483958/35‑1
               ACTTTTTGGGGTCAGTACATAATGAGGCTATCGGC                    <  1:11912970/35‑1
               ACTTTTTGGGGTCAGTACATAATGAGGCTATCGGC                    <  1:15506107/35‑1
               ACTTTTTGGGGTCAGTACATAATGAGGCTATCGGC                    <  1:19375134/35‑1
               ACTTTTTGGGGTCAGTACATAATGAGGCTAACGGC                    >  1:15009595/1‑35
               ACTTTTTGGGGTCAGTACATAATGAGGCTAACGGC                    >  1:3558471/1‑35
                CTTTTTGGGGTCAGTACATAATGAGGCTATCGGCT                   <  1:19144163/35‑1
                CTTTTTGGGGTCAGTACATAATGAGGCTATCGGCT                   <  1:11166860/35‑1
                 TTTTTGGGGTCAGTACATAATGAGGATATCGGCTT                  <  1:9555885/35‑1
                  TTTTGGGGTCAGTACATAATGAGGCTATCGGCTTC                 <  1:10681247/35‑1
                  TTTTGGGGTCAGTACATAATGAGGCTATCGGCTTC                 <  1:11278868/35‑1
                  TTTTGGGGTCAGTACATAATGAGGCTATCGGCTTC                 <  1:4325785/35‑1
                  TTTTGGGGTCAGTACATAATGAGGCTAACGGCTTt                 >  1:9895267/1‑34
                   TTTGGGGTCAGTACATAATGAGGCTATCGGCTTCT                <  1:18727009/35‑1
                    TTGGGGTCAGTACATAATGAGGCTATCGGCTTCTT               <  1:10396128/35‑1
                    TTGGGGTCAGTACATAATGAGGCTATCGGCTTCTT               <  1:12070117/35‑1
                      GGGGTCAGTACATAATGAGGCTATCGGCTTCTTCA             <  1:9786967/35‑1
                      GGGGTCAGTACATAATGAGGCTATCGGCTTCTTCA             <  1:5698781/35‑1
                       GGGTCAGTACATAATGAGGCTATCGGCTTCTTCAG            <  1:9944705/35‑1
                       GGGTCAGTACATAATGAGGCTATCGGCTTCTTCAG            <  1:19560041/35‑1
                       GGGTCAGTACATAATGAGGCTATCGGCTTCTTCAG            <  1:2706339/35‑1
                        GGTCAGTACATAATGAGGCTATCGGCTTCTTCAGC           <  1:5521049/35‑1
                        GGTCAGTACATAATGAGGCTATCGGCTTCTTCAGC           <  1:13557793/35‑1
                        GGTCAGTACATAATGAGGCTATCGGCTTCTTCAGC           <  1:16952810/35‑1
                        GGTCAGTACATAATGAGGCTATCGGCTTCTTCAGC           <  1:3767650/35‑1
                         GTCAGTACATAATGAGGCTATCGGCTTCTTCAGCG          <  1:3227595/35‑1
                         GTCAGTACATAATGAGGCTATCGGCTTCTTCAGCG          <  1:13935297/35‑1
                           CAGTACATAATGAGGCTATCGGCTTCTTCAGCGGG        <  1:4525125/35‑1
                           CAGTACATAATGAGGCTATCGGCTTCTTCAGCGGG        <  1:14184631/35‑1
                            atTACATAATGAGGCTATCGGCTTCTTCAGCGGGT       <  1:7848991/33‑1
                            AGTACATAATGAGGCTATCGGCTTCTTCAGCGGGT       <  1:14271990/35‑1
                            AGTACATAATGAGGCTATCGGCTTCTTCAGCGGGT       <  1:6717374/35‑1
                             GTACATAATGAGGCTATCGGCTTCTTCAGCGGGTA      <  1:6752879/35‑1
                              TACATAATGAGGCTATCGGCTTCTTCAGCGGGTAG     <  1:5040129/35‑1
                              TACATAATGAGGCTATCGGCTTCTTCAGCGGGTAG     <  1:11885654/35‑1
                                CATAATGAGGCTATCGGCTTCTTCAGCGGGTAGCA   <  1:1610938/35‑1
                                CATAATGAGGCTATCGGCTTCTTCAGCGGGTAGCA   <  1:16110781/35‑1
                                 ATAATGAGGCTATCGGCTTCTTCAGCGGGTAGCAG  <  1:6065412/35‑1
                                                                    
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/3894963‑3894996
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAATGAGGCTATCGGCTTCTTCAGCGGGTAGCAG  <  REL606/4110239‑4110206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.