New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3656754 = | 92 (0.900) | 4 (0.070) | 3/28 | NT | 7.1% | coding (410/996 nt) | yiaH | conserved inner membrane protein |
? | REL606 | = 4045305 | 51 (0.850) | coding (165/1407 nt) | yihP | predicted transporter |
Only 100 of 159 total aligned reads displayed.
AAAAGATAATGCCGCCATAGGTGCCTGGCAGCCCCAGAACGTCGGTATAAAACTTCAAAAGATAAAGCG > REL606/4045271‑4045339 | aaaaGATAATGCCTCCATAGGTGCCTGGCAGcccc > 1:2313675/1‑35 (MQ=255) aaaaGATAATGCCGCCATAGGTGCCTGGCAGcccc > 1:9425885/1‑35 (MQ=255) aaaaGATAATGCCGCCATAGGTGCCTGGCAGcccc > 1:11635141/1‑35 (MQ=255) aaaGATAATGCCGCCATAGGTGCCTGGCAGCCCCa < 1:324298‑M2/35‑2 (MQ=255) aaaGATAATGCCGCCATAGGTGCCTGGCAGCCCCa < 1:16584042‑M2/35‑2 (MQ=255) aaaGATAATGCCGCCATAGGTGCCTGGCAGCCCCa < 1:6395353‑M2/35‑2 (MQ=255) aaaGATAATGCCGCCATAGGTGCCTGGCAGCCCCa < 1:6701251‑M2/35‑2 (MQ=255) aaaGATAATGCCGCCATAGGTGCCTGGCAGCCCCa < 1:12847364‑M2/35‑2 (MQ=255) aaGATAATGCCGCCATAGGTGCCTGGCAGCCCCag < 1:736012‑M2/35‑3 (MQ=255) aGATAATGCCGCCATAGGTTCCTGGCAGCCCCaga < 1:1534504‑M2/35‑4 (MQ=255) aGATAATGCCGCCATAGGTGCCTGGCAGCCCCaga < 1:11462184‑M2/35‑4 (MQ=255) aGATAATGCCGCCATAGGTGCCTGGCAGCCCCaga < 1:14318973‑M2/35‑4 (MQ=255) gATAATGCCGCCATAGGTGCCTGGCAGCCCCagaa < 1:17993828‑M2/35‑5 (MQ=255) aTAATGCCGCCATAGGTGCCTGGCAGCCCCagaac < 1:16090883‑M2/35‑6 (MQ=255) tAATGCCGCCATAGGTGCCTGGCAGCCCCagaacg < 1:2098833‑M2/35‑7 (MQ=255) tAATGCCGCCATAGGTGCCTGGCAGCCCCagaacg < 1:13663131‑M2/35‑7 (MQ=255) tAATGCCGCCATAGGTGCCTGGCAGCCCCagaacg < 1:8674602‑M2/35‑7 (MQ=255) aaTGCCGCCATAGGTGCCTGGCAGCCCCagaacgt < 1:12176396‑M2/35‑8 (MQ=255) aaTGCCGCCATAGGTGCCTGGCAGCCCCagaacgt < 1:16825966‑M2/35‑8 (MQ=255) aaTGCCGCCATAGGTGCCTGGCAGCCCCagaacgt < 1:1094176‑M2/35‑8 (MQ=255) gccccgccataGGTGCCTGGCAGCCCCagaacgtc > 1:5120442‑M2/4‑27 (MQ=255) cccccgccataGGTGCCTGGCAGCCCCagaacgtc > 1:7821823‑M2/4‑27 (MQ=255) cccccgccataGGTGCCTGGCAGCCCCagaacgtc > 1:3915377‑M2/4‑27 (MQ=255) cccccgccataGGTGCCTGGCAGCCCCagaacgtc > 1:4068314‑M2/4‑27 (MQ=255) cccccgccataGGTGCCTGGCAGCCCCagaacgtc > 1:5743883‑M2/4‑27 (MQ=255) cccccgccATAGGTGCCTGGCAGCACCAGAACGTc < 1:3152571/32‑1 (MQ=25) aTGCCGCCATAGGTGCCTGGCAGCCCCagaacgtc < 1:9268650‑M2/35‑9 (MQ=255) aTGCCGCCATAGGTGCCTGGCAGCCCCagaacgtc < 1:19362577‑M2/35‑9 (MQ=255) aTGCCGCCATAGGTGCCTGGCAGCCCCagaacgtc < 1:13451379‑M2/35‑9 (MQ=255) aTGCCGCCATAGGTGCCTGGCAGCCCCagaacgtc < 1:11563066‑M2/35‑9 (MQ=255) tGCCGCCATAGGTGCCTGGCAGCCCCagaacgtcg < 1:6172956‑M2/35‑10 (MQ=255) tGCCGCCATAGGTGCCTGGCAGCCCCagaacgtcg < 1:828138‑M2/35‑10 (MQ=255) tGCCGCCATAGGTGCCTGGCAGCCCCagaacgtcg < 1:20328470‑M2/35‑10 (MQ=255) cccgccaTAGGTGCCTGGCAGCCCCagaacgtcgg > 1:18272024‑M2/2‑25 (MQ=255) ccgccATAGGTGCCTGGCATCCCCagaacgtcggg < 1:15061927‑M2/35‑12 (MQ=255) ccgccATAGGTGCCTGGCAGCCCCAGAACGTCGGt < 1:11956191/35‑1 (MQ=255) ccgccATAGGTGCCTGGCAGCCCCAGAACGTCGGt < 1:3664270/35‑1 (MQ=255) cgccATAGGTGCCTGGCATCCCCAGAACGTCgggg > 1:3047281/1‑33 (MQ=37) cgccATAGGTGCCTGGCAGCCCCagaacgtcgggt < 1:1913319‑M2/35‑13 (MQ=255) cgccATAGGTGCCTGGCAGCCCCagaacgtcgggg < 1:18236714‑M2/35‑13 (MQ=255) cgccATAGGTGCCTGGCAGCCCCagaacgtcgggg < 1:2699706‑M2/35‑13 (MQ=255) cgccATAGGTGCCTGGCAGCCCCAGAACGTCGGta < 1:16260032/35‑1 (MQ=255) cgccATAGGTGCCTGGCAGCCCCAGAACGTCGGta < 1:10720176/35‑1 (MQ=255) cgccATAGGTGCCTGGCAGCCCCAGAACGGCggga > 1:9136610/1‑33 (MQ=38) gccATAGGTGCCTGTCAGCCCCAGAACGTCggggg > 1:8338389/1‑32 (MQ=25) gccATAGGTGCCTGGCAGCCCCagaacgtcggggt < 1:17194179‑M2/35‑14 (MQ=255) gccATAGGTGCCTGGCAGCCCCagaacgtcggggt < 1:5760073‑M2/35‑14 (MQ=255) gccATAGGTGCCTGGCAGCCCCAGAACGTCGGtat < 1:1842888/35‑1 (MQ=255) gccATAGGTGCCTGGCAGCCCCAGAACGTCGGtat < 1:19611046/35‑1 (MQ=255) gccATAGGCGCCTGGCAGCCCCAGAACGTCggggt > 1:8069790/1‑32 (MQ=37) gcaaTAGGTGCCTGGCAGCCCCAGAACGTAGGtat < 1:15832705/32‑1 (MQ=37) ccATGGGTGCCTGGCAGCCCCAGAACGTCGGtata < 1:15722214/35‑1 (MQ=255) ccATAGGTGCCTTGCAGCCCCAGAACGTCGGtata < 1:2611558/35‑1 (MQ=255) ccATAGGTGCCTGGCAGCCCCAGAACGTCGGtata < 1:14800791/35‑1 (MQ=255) cATAGGTGCCTGGCAGCCCCagaacgtcgggggaa < 1:12473131‑M2/35‑16 (MQ=255) cATAGGTGCCTGGCAGCCCCAGAACGTCGGTATaa < 1:12247242/35‑1 (MQ=255) cATAGGTGCCTGGCAGCCCCAGAACGTCGGTATaa < 1:8049307/35‑1 (MQ=255) cATAGGTGCCTGGCAGCCCCAGAACGTCGGGATaa > 1:20051461/1‑35 (MQ=255) cATAGGTGCCTGGCAGCCCCAGAACGTCGGGATaa > 1:10010735/1‑35 (MQ=255) aTAGGTGCCTGGCAGCCCCagaacgtcgggggaaa < 1:3516354‑M2/35‑17 (MQ=255) aTAGGTGCCTGGCAGCCCCAGAACGTCGGTATaaa < 1:1919143/35‑1 (MQ=255) aTAGGTGCCTGGCAGCCCCAGAACGTCGGTATaaa < 1:11488764/35‑1 (MQ=255) aTAGGTGCCTGGCAGCCCCAGAACGTCGGTATaaa < 1:10415657/35‑1 (MQ=255) aTAGGTGCCTGGCAGCCCCAGAACGTCGGGGTaaa > 1:1924393/1‑35 (MQ=37) aTAGGTGCCTGGCAGCCCCAGAACGTCGGGAAaaa > 1:4830046/1‑35 (MQ=37) aTAGGTCCCTGGCAGCCCCAGAACGTCGGTATaaa < 1:16865349/35‑1 (MQ=255) tAGGTGCCTGGCAGCCCCagaacgtcgggggaaaa < 1:10969683‑M2/35‑18 (MQ=255) tAGGTGCCTGGCAGCCCCagaacgtcgggggaaaa < 1:7237962‑M2/35‑18 (MQ=255) aGGTGCCTGGCAGCCCCagaacgtcgggggaaaaa < 1:5868579‑M2/35‑19 (MQ=255) aGGTGCCTGGCAGCCCCAGAACGTCGGTATAAAAc < 1:4632349/35‑1 (MQ=255) aGGTGCCTGGCAGCCCCAGAACGTCGGGGTaaaaa > 1:12740755/1‑34 (MQ=25) ggTGCCTGGCAGCCCCAGAACGTCGGTATAAAACt < 1:15111786/35‑1 (MQ=255) ggTGCCTGGCAGCCCCAGAACGTCGGTATAAAACt < 1:7715137/35‑1 (MQ=255) ggTGCCTGGCAGCCCCAGAACGTCGGTATAAAACt < 1:10141272/35‑1 (MQ=255) ggtccTGCCAGCCCCAGAACGTCGGTATAAAACtt < 1:9344114/32‑1 (MQ=38) gTGCCTGGCAGCCCCAGAACGTCGGTATAAAACtt < 1:14936715/35‑1 (MQ=255) gTGCCTGGCAGCCCCAGAACGTCGGTATAAAACtt < 1:5883601/35‑1 (MQ=255) gTGCCTGGCAGCCCCAGAACGTCGGTATAAAACtt < 1:16909943/35‑1 (MQ=255) gTGCCTGGCAGCCCCAGAACGTCGGTATAAAACtt < 1:17716331/35‑1 (MQ=255) tGCCTGGCAGCCCCAGAACGTCGGTATAAAACTTc < 1:4597275/35‑1 (MQ=255) gCCTGGCAGCCCCAGAACGTCGGTATAAAACTTCa < 1:4701906/35‑1 (MQ=255) gCCTGGCAGCCCCAGAACGTCGGTATAAAACTTCa < 1:8133639/35‑1 (MQ=255) gCCTGGCAGCCCCAGAACGTCGGTATAAAACTTCa < 1:7741764/35‑1 (MQ=255) ccTGGCAGCCCCAGAACGTCGGTATAAAACTTCaa < 1:887780/35‑1 (MQ=255) ccTGGCAGCCCCAGAACGTCGGTATAAAACTTCaa < 1:9724036/35‑1 (MQ=255) cgggCAGCCCCAGAACGTCGGTATAAAACTTCaaa < 1:10416794/33‑1 (MQ=255) tGGCAGCCCCAGAACGTCGGTATAAAACTTCaaaa < 1:3839922/35‑1 (MQ=255) ggCAGCCCCAGAACGTCGGTATAAAACTTCAAAAg < 1:15326352/35‑1 (MQ=255) gCAGCCCCAGAACGTCGGTATAAAACTTCAAAAGa < 1:15904330/35‑1 (MQ=255) gCAGCCCCAGAACGTCGGGGTAAAACTTCaaaaaa > 1:6773500/1‑33 (MQ=25) aGCCCCAGAACGTCGGTATAAAACTTCAAAAGATa < 1:19822818/35‑1 (MQ=255) gCCCCAGAACGTCGGTATAAAACTTCAAAAGATaa < 1:9149505/35‑1 (MQ=255) gCCCCAGAACGTCGGTATAAAACTTCAAAAGATaa < 1:20552379/35‑1 (MQ=255) cccAGAACGTCGGTATAAAACTTCAAAAGATAAAg < 1:11912141/35‑1 (MQ=255) cccAGAACGTCGGTATAAAACTTCAAAAGATAAAg < 1:11759095/35‑1 (MQ=255) cccAGAACGTCGGTATAAAACTTCAAAAGATAAAg < 1:6429703/35‑1 (MQ=255) cccAGAACGTCGGTATAAAACTTCAAAAGATAAAg < 1:16404797/35‑1 (MQ=255) cccAGAACGTCGGTATAAAACTTCAAAAGATAAAg < 1:175624/35‑1 (MQ=255) cccAGAACGTCGGTATAAAACTTCAAAAGATAAAg < 1:178547/35‑1 (MQ=255) cAGAACGTCGGTATAAAACTTCAAAAGATAAAGCg < 1:19889450/35‑1 (MQ=255) | AAAAGATAATGCCGCCATAGGTGCCTGGCAGCCCCAGAACGTCGGTATAAAACTTCAAAAGATAAAGCG > REL606/4045271‑4045339 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |