New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 481061 = | 70 (0.680) | 12 (0.160) | 4/34 | NT | 13.9% | coding (2487/2505 nt) | copA | copper transporter |
? | REL606 | = 606452 | 99 (1.360) | coding (767/957 nt) | fepB | iron‑enterobactin transporter subunit |
CGTCGATTACCGTAGTGAGTAACGCCAACCGGTTGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/481101‑481061 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcggGGTTAAACGGTGAATCGCTATTCCTGTTCGCCGG < REL606/606452‑606419 CGTCGATTACCGTAGTGAGTAACGCCAACCGGTTG < 1:12261921/35‑1 CGTAGATTACCGTAGTGAGTAACGCCAACCGGTTG < 1:5723877/35‑1 GTCGATTACCGTAGTGAGTAACGCCAACCGGTTGg > 1:6343375/1‑34 GTCGATTACCGTAGTGAGTAACGCCAACCGGTTGC > 1:14396318/1‑35 GTCGATTACCGTAGTGAGTAACGCCAACCGGTTGC < 1:12278064/35‑1 TCGATTACCGTAGTGAGTAACGCCAACCGGTTGCT > 1:8925933/1‑35 TCGATTACCGTAGTGAGTAACGCCAACCGGTTGCT > 1:6159102/1‑35 TCGATTACCGTAGTGAGTAACGCCAACCGGTTGCT < 1:16177431/35‑1 CGATTACCGTAGTGAGTAACGCCAACCGGTTGCTG < 1:19027797/35‑1 CGATTACCGTAGTGAGTAACGCCAACCGGTTGCTG < 1:18232041/35‑1 CGATTACCGTAGTGAGTAACGCCAACCGGTTGCTG > 1:6867161/1‑35 CGATTACCGTAGTGAGTAACGCCAACCGGTTGCTG > 1:7200518/1‑35 CGATTACCGTAGTGAGTAACGCCAACCGGTTGCTG > 1:1328044/1‑35 CGATTACCGTAGTGAGTAACGCCAACCGGTTGCTG < 1:16503606/35‑1 GATTGCCGTAGTGAGTAACGCCAACCGGTTGCTGC < 1:16946960/35‑1 GATTACCGTAGTGAGTAACGCCAACCGGTTGCTGC > 1:14145526/1‑35 GATTACCGTAGTGAGTAACGCCAACCGGTTGCTGC < 1:16682794/35‑1 GATTACCGTAGTGAGTAACGCCAACCGGTTGCTGC < 1:11364457/35‑1 GATTACCGTAGTGAGTAACGCCAACCGGTTGCTGC > 1:10913229/1‑35 GATTACCGTAGTGAGTAACGCCAACCGGTTGCTGC > 1:18816980/1‑35 GATTACCGTAGTGAGTAACGCCAACCGGTTGCTGC < 1:4105270/35‑1 ATTCCCGTAGTGAGTAACGCCAACCGGTTGCTGCG < 1:17911246/35‑1 ATTACCGTAGTGAGTAACGCCAACCGGTTGCTGCG < 1:15304272/35‑1 ATTACCGTAGTGAGTAACGCCAACCGGTTGCTGCG < 1:650680/35‑1 ATTACCGTAGTGAGTAACGCCAACCGGTTGCTGCG > 1:9383373/1‑35 ATTACCGTAGTGAGTAACGCCAACCGGTTGCTGCG > 1:11182399/1‑35 ttgCCGTAGTGAGTAACGCCAACCGGTTGCTGCGG < 1:2782672/32‑1 TTACCGTAGTGAGTAACGCCAACCGGTTGGTGCGG > 1:323954/1‑35 TTACCGTAGTGAGTAACGCCAACCGGTTGCTGCGG > 1:14141762/1‑35 TTACCGTAGTGAGTAACGCCAACCGGTTGCTGCGG < 1:1523438/35‑1 TTACCGTAGTGAGTAACGCCAACCGGTTGCTGCGG < 1:19770722/35‑1 TTACCGTAGTGAGTAACGCCAACCGGTTGCTGCGG < 1:4843577/35‑1 TTACCGTAGTGAGTAACGCCAACCGGTTGCTGCGG > 1:9334569/1‑35 TTACCGTAGTGAGTAACGCCAACCGGTTGCTGCGG < 1:6038541/35‑1 TTACCGTAGTGAGTAACGCCAACCGGTTGCTGCGG < 1:12181580/35‑1 TACCGTAGTGAGTAACGCCAACCGGTTGCTGCGGG > 1:1696148/1‑35 TACCGTAGTGAGTAACGCCAACCGGTTGCTGCGGG > 1:12790336/1‑35 ACCGTAGTGAGTAACGCCAACCGGTTGCTGCGGGG > 1:2802724/1‑35 CGTAGTGAGTAACGCCAACCGGTTGCTGCGGTGTT > 1:8718491/1‑35 CGTAGTGAGTAACGCCAACCGGTTGCTGCGGGTTT > 1:8507465/1‑35 CGTAGTGAGTAACGCCAACCGGTTGCTGCGGGTTT > 1:10072066/1‑35 CGTAGTGAGTAACGCCAACCGGTTGCTGCGGGTTT > 1:5323323/1‑35 GTAGTGAGTAACGCCAACCGGTTGCTGCGGGTTTA > 1:3958296/1‑35 GTAGTGAGTAACGCCAACCGGTTGCTGCGGGTTTA > 1:4258879/1‑35 GTAGTGAGTAACGCCAACCGGTTGCTGCGGGTTTA > 1:1644092/1‑35 GTAGTGAGTAACGCCAACCGGTTGCTGCGGGTTTA > 1:10288716/1‑35 TAGTGAGTAACGCCAACCGGTTGCTGCGGGTTTAA > 1:16887407/1‑35 TAGTGAGTAACGCCAACCGGTTGCTGCGGGTTTAA > 1:12414961/1‑35 TAGTGAGTAACGCCAACCGGTTGCTGCGGGTTTAA > 1:1360440/1‑35 AGTGAGTAACGCCAACCGGTTGCTGCGGGTTTAAc > 1:8164462/1‑34 AGTGAGTAACGCCAACCGGTTGCTGCGGGTTTAAA > 1:644462/1‑35 AGTGAGTAACGCCAACCGGTTGCTGCGGGGTTTAA > 1:16887233/1‑35 AGTGAGTAACGCCAACCGGTTGCTGCGGGGTTAAA > 1:5860934/1‑35 AGTGAGTAACGCCAACCGGTTGCTGCGGGGTTAAA > 1:14190448/1‑35 GTGAGTAACGCCAACCGGTTGCTGCGGGTTTAAAC > 1:8175774/1‑35 GTGAGTAACGCCAACCGGTTGCTGCGGGGTTAAcc > 1:18066211/1‑33 GTGAGTAACGCCAACCGGTTGCTGCGGGGTTAAAC > 1:10324344/1‑35 TGAGTAACGCCAACCGGTTGCTGCGGGGTTAAACG > 1:3637635/1‑35 gaCTGCGGGGTTAAACGGTGAATCGCTATTCCTGT < 1:17781161/33‑1 GCTGCGGGGTTAAACGGTGAATCGCTATTCCTGTT > 1:10548571/1‑35 GCTGCGGGGTTAAACGGTGAATCGCTATTCCTGTT < 1:13944458/35‑1 GCTGCGGGGTTAAACGGTGAATCGCTATTCCTGTT > 1:6596347/1‑35 GCTGCGGGGTTAAACGGTGAATCGCTATTCCTGTT > 1:15057274/1‑35 CTGCGGGGTTAAACGGTGAATCGCTATTCCTGTTC < 1:19144167/35‑1 CTGCGGGGTTAAACGGTGAATCGCTATTCCTGTTC < 1:8313476/35‑1 CTGCGGGGTTAAACGGTGAATCGCTATTCCTGTTC < 1:7392044/35‑1 CTGCGGGGTTAAACGGTGAATCGCTATTCCTGTTC < 1:16922913/35‑1 TGCGGGGTTAAACGGTGAATCGCTATTCCTGTTCG > 1:10042606/1‑35 TGCGGGGTTAAACGGTGAATCGCTATTCCTGTTCG > 1:10652768/1‑35 TGCGGGGTTAAACGGTGAATCGCTATTCCTGTTCG < 1:150528/35‑1 TGCGGGGTTAAACGGTGAATCGCTATTCCTGTTCG < 1:17474278/35‑1 TGCGGGGTTAAACGGTGAATCGCTATTCCTGTTCG > 1:1768374/1‑35 GCGGGGTTAAACGGTGAATCGCTATTCCTGTTCGC < 1:6950703/35‑1 GCGGGGTTAAACGGTGAATCGCTATTCCTGTTCGC < 1:13886599/35‑1 GCGGGGTTAAACGGTGAATCGCTATTCCTGTTCGC > 1:11195143/1‑35 CGGGGTTAAACGGTGAATCGCTATTCCTGTTCGCC > 1:6537336/1‑35 CGGGGTTAAACGGTGAATCGCTATTCCTGTTCGCC < 1:2928250/35‑1 GGGGTTAAACGGTGAATCGCTATTCCTGTTCGCCG > 1:1559398/1‑35 GGGGTTAAACGGTGAATCGCTATTCCTGTTCGCCG < 1:6257202/35‑1 GGGGTTAAACGGTGAATCGCTATTCCTGTTCGCCG < 1:17684331/35‑1 GGGGTTAAACGGTGAATCGCTATTCCTGTTCGCCG < 1:10653843/35‑1 GGGGTTAAACGGTGAATCGCTATTCCTGTTCGCCG > 1:439003/1‑35 GGGGTTAAACGGTGAATCGCTATTCCTGTTCGCCG > 1:3958013/1‑35 GGGTTAAACGGTGAATCGCTATTCCTGTTCGCCGG > 1:11452678/1‑35 CGTCGATTACCGTAGTGAGTAACGCCAACCGGTTGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/481101‑481061 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcggGGTTAAACGGTGAATCGCTATTCCTGTTCGCCGG < REL606/606452‑606419 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |