New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1306327 = | 87 (0.850) | 9 (0.140) | 3/30 | NT | 15.9% | intergenic (‑88/+283) | cls/kch | cardiolipin synthetase/voltage‑gated potassium channel |
? | REL606 | = 3884923 | 41 (0.640) | coding (1072/1890 nt) | gidA | glucose‑inhibited division protein A |
ACCCCCGCCCCCGACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1306345‑1306327 ‑‑‑‑‑‑‑‑‑‑ccgacgctgGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGCTG < REL606/3884923‑3884890 cCCCCCCCCCCCGACGCTGGAGAGCAAGTTTATCC < 1:3710290/34‑1 CCCCCCCCCCCGACGCTGGAGAGCAAGTTTATCCA < 1:6403791/35‑1 CCCCCCCCCCGACGCTGGAGAGCAAGTTTATCCAG < 1:10799009/35‑1 CCCCCCCCCCGACGCTGGAGAGCAAGTTTATCCAG < 1:4993558/35‑1 CCCCCCCCCCGACGCTGGAGAGCAAGTTTATCCAG < 1:1332990/35‑1 CCCCCCCCCGACGCTGGAGAGCAAGTTTATCCAGG < 1:16854373/35‑1 CCCCCCCCCGACGCTGGAGAGCAAGTTTATCCAGG < 1:482860/35‑1 CCCCCCCCCGACGCTGGAGAGCAAGTTTATCCAGG < 1:6545660/35‑1 CCCCCCCCCGACGCTGGAGAGCAAGTTTATCCAGG < 1:623907/35‑1 cccCCCCCGACGCTGGAGAGCAAGTTTATCCAGGG < 1:6541698/32‑1 ccCCCCCGACGCTGGAGAGCAAGTTTATCCAGGGG < 1:17674231/33‑1 ccCCCCCGACGCTGGAGAGCAAGTTTATCCAGGGG < 1:2006030/33‑1 cCCCCCGACGCTGGAGAGCAAGTTTATCCAGGGGC < 1:8172764/34‑1 cCCCCCGACGCTGGAGAGCAAGTTTATCCAGGGGC < 1:1986119/34‑1 cCCCCCGACGCTGGAGAGCAAGTTTATCCAGGGGC < 1:20092454/34‑1 cCCCCCGACGCTGGAGAGCAAGTTTATCCAGGGGC < 1:7062122/34‑1 CCCCCGACGCTGGAGAGCAGGTTTATCCAGGGGCT < 1:6770817/35‑1 CCCCCGACGCTGGAGAGCAAGTTTATCGAGGGGCT < 1:11057782/35‑1 CCCCCGACGCTGGAGAGCAAGTTTATCCAGGGGCT < 1:5340334/35‑1 CCCCCGACGCTGGAGAGCAAGTTTATCCAGGGGCT < 1:5623750/35‑1 CCCCCGACGCTGGAGAGCAAGTTTATCCAGGGGCT < 1:16038391/35‑1 CCCCCGACGCTGGAGAGCAAGTTTATCCAGGGGCT < 1:10780355/35‑1 CCCCCGACGCTGGAGAGCAAGTTTATCAAGGGGCT < 1:10288919/35‑1 CCCCGACGCTGGAGAGCAAGTTTGTCCAGGGGCTG < 1:16618140/35‑1 CCCCGACGCTGGAGAGCAAGTTTATCCAGGGGCTG < 1:5555809/35‑1 CCCCGACGCTGGAGAGCAAGTTTATCCAGGGGCTG < 1:1820504/35‑1 CCCCGACGCTGGAGAGCAAGTTTATCCAGGGGCTG < 1:8234315/35‑1 CCCCGACGCTGGAGAGCAAGTTTATCCAGGGGCTG < 1:5924531/35‑1 CCCCGACGCTGGAGAGCAAGTTTATCCAGGGGCTG < 1:5915495/35‑1 CCCGACGCTGGAGAGCAAGTTTATCCAGGGGCTGT < 1:12965351/35‑1 caGACGCTGGAGAGCAAGTTTATCCAGGGGCTGTT < 1:13900055/33‑1 CCGACGCTGGAGAGCAAGTTTATCCAGGGGCTGgg > 1:356515/1‑33 CCGACGCTGGAGAGCAAGTTTATCCAGGGGCTGTT < 1:750125/35‑1 CCGACGCTGGAGAGCAAGTTTATCCAGGGGCTGTT < 1:20286921/35‑1 CCGACGCTGGAGAGCAAGTTTATCCAGGGGCTGTT < 1:4270302/35‑1 CGACGCTGGAGAGCAAGTTTATCCAGGGGCTGggg > 1:11547335/1‑32 CGACGCTGGAGAGCAAGTTTATCCAGGGGCTGggg > 1:7379626/1‑32 CGACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTC < 1:2046542/35‑1 CGACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTC < 1:16721411/35‑1 GACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCT < 1:4013723/35‑1 GACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCT < 1:3054985/35‑1 GACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCT < 1:4581970/35‑1 GACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCT < 1:7032122/35‑1 GACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCT < 1:17779774/35‑1 ACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCTT < 1:5661275/35‑1 ACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCTT < 1:20103935/35‑1 ACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCTT < 1:8205198/35‑1 ACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCTT < 1:11589656/35‑1 CGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCTTT < 1:20535859/35‑1 CGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCTTT < 1:1454548/35‑1 CGCTGGAGAGCAAGTTTATCCAGGGGCTGTGCTTT < 1:5788795/35‑1 GCTGGAGAGCAAGTTTATCCAGGGGCTGTTCTTTG < 1:12894880/35‑1 GCTGGAGAGCAAGTTTATCCAGGGGCTGTTCTTTG < 1:11525482/35‑1 CTGGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGC < 1:20197864/35‑1 TGGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGCT < 1:9657874/35‑1 TGGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGCT < 1:15597200/35‑1 TGGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGCT < 1:13159320/35‑1 GGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGCTG < 1:2061972/35‑1 GGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGCTG < 1:18424574/35‑1 GGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGCTG < 1:17613835/35‑1 GGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGCTG < 1:8391205/35‑1 GGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGCTG < 1:10053639/35‑1 ACCCCCGCCCCCGACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1306345‑1306327 ‑‑‑‑‑‑‑‑‑‑ccgacgctgGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGCTG < REL606/3884923‑3884890 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |