New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3258154 = | 65 (0.630) | 8 (0.110) | 5/34 | NT | 13.0% | coding (1151/1338 nt) | glmM | phosphoglucosamine mutase |
? | REL606 | 3281934 = | 61 (0.840) | coding (122/492 nt) | ptsN | sugar‑specific enzyme IIA component of PTS |
Only 100 of 123 total aligned reads displayed.
CGCGCCCTGGAAATCATCAGCGAGCTGGCGGCGAAACAACTTAGCCTGCCGCCTCAGGTGGTTTTTGAA > REL606/3281900‑3281968 | cgcgCCCTGGAAATCATCAGCGAGCTGGCGGCGaa > 1:12487483/1‑35 (MQ=255) ggttaacgtacgttacaccgcaggtagcggcgaaa > 1:2900768‑M2/34‑35 (MQ=255) gcgcCCTGGAAATCATCAGCGAGCTGGCGGCGaaa > 1:18643622/1‑35 (MQ=255) gcgcCCTGGAAATCATCAGCGAGCTGGCGGCGaaa < 1:12713320/35‑1 (MQ=255) ttaacgtacgttacaccgcaggtagcggcgaaaca > 1:17549297‑M2/32‑35 (MQ=255) gcCCTGGAAATCATCAGCGAGCTGGCGGCGaacaa > 1:6015062/1‑32 (MQ=255) gcCCTGGAAATCATCAGCGAGCTGGCGGCGAaaca < 1:19989325/35‑1 (MQ=255) gcCCTGGAAATCATCAGCGAGCTGGCGGCGAaaca < 1:14642710/35‑1 (MQ=255) gcCCTGGAAATCATCAGCGAGCTGGCGGCGAaaca < 1:20390068/35‑1 (MQ=255) gcCCTGGAAATCATCAGCGAGCTGGCGGCGAaaca < 1:6433971/35‑1 (MQ=255) gcCCTGGAAATCATCAGCGAGCTGGCGGCGAaaca < 1:4556520/35‑1 (MQ=255) gcCCTGGAAATCAGCAGCGAGCTGGCGGCGAaaca < 1:13440816/35‑1 (MQ=255) taacgtacgttacaccgcaggtagcggcgaaaccc > 1:1432541‑M2/31‑33 (MQ=255) taacgtacgttacaccgcaggtagcggcgaaacac > 1:3401707‑M2/31‑34 (MQ=255) cccTGGAAATCATCAGCGAGCTGGCGGCGAaacaa < 1:13117813/35‑1 (MQ=255) cccTGGAAATCATCAGCGAGCTGGCGGCGAaacaa < 1:10046766/35‑1 (MQ=255) ccTGGAAATCATCAGCTAGCTGGCGGCGAaacaac > 1:8993105/1‑35 (MQ=255) ccTGGAAATCATCAGCGAGCTGGCGGCGAaataac > 1:5218437/1‑35 (MQ=255) ccTGGAAATCATCAGCGAGCTGGCGGCGAaataac > 1:11166236/1‑35 (MQ=255) ccTGGAAATCATCAGCGAGCTGGCGGCGAaacaac > 1:20596629/1‑35 (MQ=255) ccTGGAAATCATCAGCGAGCTGGCGGCGAaacaac > 1:1430869/1‑35 (MQ=255) ccTGGAAATCATCAGCGAGCTGGCGGCGAaacaaa > 1:12896240/1‑34 (MQ=255) acgtacgttacaccgcaggtagcggcgaaccaacc > 1:7286277‑M2/29‑34 (MQ=255) acgtacgttacaccgcaggtagcggcgaAACACCt > 1:18147064‑M2/29‑35 (MQ=255) tGGAAATCATCAGCGATCTGGCGGCGAAAAAACtt > 1:2616826/1‑35 (MQ=37) cgtacgttacaccgcaggtagcggcgaAACACCtt > 1:7808690‑M2/28‑35 (MQ=255) gtacgttacaccgcaggtagcggcgaAACAActtg > 1:19759372‑M2/27‑34 (MQ=255) ggAAATCATCAGCGAGCTGGCGGCGAAACAACTTa < 1:9677516/35‑1 (MQ=255) ggAAATCATCAGCGAGCTGGCGGCGAAACAACTTa < 1:11375458/35‑1 (MQ=255) ggAAATCATCAGCGAGCGGGCGGCGAAACAACTTa < 1:15769981/35‑1 (MQ=255) cgAAATCATCAGCGAGCGGGCGGCGAAACAACTTa < 1:733936/34‑1 (MQ=255) gAAATCATCAGCGAGCTGGCGGCGGAACAACtttg > 1:13353552/1‑33 (MQ=25) gAAATCATCAGCGAGCTGGCGGCGAAACAACTTAg > 1:4201045/1‑35 (MQ=255) gAAATCATCAGCGAGCTGGCGGCGAAACAACTTAg < 1:19244147/35‑1 (MQ=255) gAAATCATCAGCGAGCTGGCGGCGAAACAACTTAg < 1:19890124/35‑1 (MQ=255) gAAATCATCAGCGAGCTGGCGGCGAAACAACTTAg < 1:17047465/35‑1 (MQ=255) gAAATCATCAGCGAGCTGGCGGCGAAACAACTTAg < 1:1078235/35‑1 (MQ=255) gAAATCATCAGCGAGCTGGCGGCGAAACAACTTAg > 1:17511552/1‑35 (MQ=255) gAAATCATCAGCGAGCTGGCGGCGAAACAACTTAg < 1:18068256/35‑1 (MQ=255) gAAATCATCAGCGAGCTGGCGGCGAAACAACCTAg > 1:19530785/1‑35 (MQ=255) aaaTCATCAGCGAGCTGGCGGCGAAACAACTTAGc < 1:11397161/35‑1 (MQ=255) aaaTCATCAGCGAGCTGGCGGCGAAACAACTTAGc > 1:18185657/1‑35 (MQ=255) aaaTCATCAGCGAGCTGGCGGCGAAACAACTTAGc < 1:17234940/35‑1 (MQ=255) aaaTCATCAGCGAGCTGGCGGCGAAACAACTTAGc < 1:10233490/35‑1 (MQ=255) aaaTCATCAGCGAGCTGGCGGCGAAACAACTTAGc > 1:9180609/1‑35 (MQ=255) aaTCATCAGCGAGCTGGCGGCGAAACAACTTAGcc < 1:3701670/35‑1 (MQ=255) aaTCATCAGCGAGCTGGCGGCGAAACAACTTAGcc > 1:37885/1‑35 (MQ=255) atcatcAGCGAGCTGGCGGCGAAACCACTTAGGCt > 1:19755456/1‑35 (MQ=37) atcatcAGCGAGCTGGCGGCGAAACAACTTAGCCt < 1:11545815/35‑1 (MQ=255) atcatcAGCGAGCTGGCGGCGAAACAACTTAGCCt < 1:18930373/35‑1 (MQ=255) atcatcAGCGAGCTGGCGGCGAAACAACTTAGCCt < 1:2982266/35‑1 (MQ=255) atcatcAGCGAGCTGGCGGCGAAACAACTTAGCCt < 1:8666192/35‑1 (MQ=255) atcatcAGCGAGCTGGCGGCGAAACAACTTAGCCt > 1:3743361/1‑35 (MQ=255) atcatcAGCGAGCTGGCGGCGAAACAACTTAGCCt < 1:16257828/35‑1 (MQ=255) ttacaccgcaggtagcggcgaAACAACTTAGCATg > 1:4871720‑M2/22‑35 (MQ=255) tcatcaGCGAGCTGGCGGCGAAACAACTTAGCCTg < 1:8766936/35‑1 (MQ=255) catcaGCGAGCTGGCGGCGAAACAACTTAGCCTgc > 1:5947183/1‑35 (MQ=255) catcaGCGAGCTGGCGGCGAAACAACTTAGCCTgc < 1:18842237/35‑1 (MQ=255) atcaGCGAGCTGGCGGCGAAACAACTTAGCCTgcc > 1:13806884/1‑35 (MQ=255) atcaGCGAGCTGGCGGCGAAACAACTTAGCCTgcc < 1:6108126/35‑1 (MQ=255) atcaGCGAGCTGGCGGCGAAACAACTTAGCCTgcc < 1:8920623/35‑1 (MQ=255) atcaGCGAGCTGGCGGCGAAACAACTTAGCCTgcc < 1:3409307/35‑1 (MQ=255) tcaGCGAGCTGGCGGCGAAACAACTTAGCCTgccg > 1:18586952/1‑35 (MQ=255) tcaGCGAGCTGGCGGCGAAACAACTTAGCCTgccg > 1:9566417/1‑35 (MQ=255) caGCGAGCTGGCGGCGAAACAACTTAGCCTgccgc > 1:20225800/1‑35 (MQ=255) caGCGAGCTGGCGGCGAAACAACTTAGCCTgccgc > 1:10519904/1‑35 (MQ=255) aGCGAGCTGGCGGCGAAACAACTTAGCCTgccgcc > 1:20416135/1‑35 (MQ=255) gCGAGCTGGCGGCGAAACAACTTAGCCTGCCGCCt < 1:10232587/35‑1 (MQ=255) gCGAGCTGGCGGCGAAACAACTTAGCCTGCAGCCt < 1:15275779/35‑1 (MQ=255) gCGAGCGGGCGGCGAAACAACTTAGCCTGCCGCCt < 1:9114764/35‑1 (MQ=255) cGAGCTGGCGGCGAAACAACTTAGCCTGCCGCCTc > 1:18160970/1‑35 (MQ=255) gAGCTGGCGGCGAAAAAACTTAGCCTGCCGCCTCa > 1:5849321/1‑35 (MQ=255) cTGGCGGCGAAACAACTTAGCCTGCCGCCTCCggt > 1:19100777/1‑35 (MQ=255) cTGGCGGCGAAACAACTTAGCCTGCCGCCTCAggt > 1:16505744/1‑35 (MQ=255) cTGGCGGCGAAACAACTTAGCCTGCCGCCTCAggg > 1:12554157/1‑34 (MQ=255) gggggcaAAACAACTTAGCCTGCCGCCTCAggtgg < 1:5648427/32‑1 (MQ=38) cggcgaAACAACTTAGCCTGCCGCCTcaggtgggt > 1:15864828‑M2/7‑33 (MQ=255) cggcgaAACAACTTAGCCTGCCGCCTcaggtgggt > 1:5451146‑M2/7‑33 (MQ=255) cggcgaAACAACTTAGCCTGCCGCCTcaggtgggt > 1:3426204‑M2/7‑33 (MQ=255) cggcgaAACAACTTAGCCTGCCGCCTCAGGTGGtt > 1:15974956‑M2/7‑35 (MQ=255) ggcgaAACAACTTAGCCTGCCGCCTCAGGTGGgtt > 1:598015‑M2/6‑35 (MQ=255) gcgaAACAACTTAGCCTGCCGCCTCAGGTGGtttt > 1:255007‑M2/5‑35 (MQ=255) gcgAAACAACTTAGCCTGCCGCCTCAGGGGGgttt > 1:1504774/1‑35 (MQ=38) gcaaAACAACTTAGCCTGCCGCCTCAGGTGGtttt < 1:12721385‑M2/31‑1 (MQ=255) gcaaAACAACTTAGCCTGCCGCCTCAGGTGGtttt < 1:1771979‑M2/31‑1 (MQ=255) cgaAACAACTTAGCCTGCCGCCTCAGGTGGttttt > 1:291292‑M2/4‑35 (MQ=255) cgaAACAACTTAGCCTGCCGCCTCAGGTGGttttt > 1:12531262‑M2/4‑35 (MQ=255) cgaAACAACTTAGCCTGCCGCCTCAGGTGGttttt > 1:19809534‑M2/4‑35 (MQ=255) cgaAACAACTTAGCCTGCCGCCTCAGGTGGgtttt > 1:15472409‑M2/4‑35 (MQ=255) cgaAACAACTTAGCCTGCCGCCTCAGGTGGgtttt > 1:1365283‑M2/4‑35 (MQ=255) caaaaCACCTTACCCTGCCGCCTCAGGTGGttttt < 1:16485772/33‑1 (MQ=37) gaAACAACTTAGCCTGCCGCCTCAGGTTGTTTTTg > 1:15200463‑M2/3‑35 (MQ=255) gaAACAACTTAGCCTGCCGCCTCAGGTGGTTTTTg > 1:1863262‑M2/3‑35 (MQ=255) gaAACAACTTAGCCTGCCGCCTCAGGTGGTTTTTg > 1:1877758‑M2/3‑35 (MQ=255) gaAACAACTTAGCCTGCCGCCTCAGGTGGGTTTTg > 1:16696074‑M2/3‑35 (MQ=255) aAACAACTTAGCCTGCCGCCTCAGGTGGTTTTTGa > 1:7627906‑M2/2‑35 (MQ=255) aAACAACTTAGCCTGCCGCCTCAGGTGGGTTTTGa > 1:4134817‑M2/2‑35 (MQ=255) aacaccTTACCCTGCCGCCTCAGGTGGTTTTTGaa < 1:15708454/35‑1 (MQ=37) aacaacTTAGCCTGCCGCCTCAGGTGGTTTTTGaa > 1:6889510/1‑35 (MQ=255) aacaacTTAGCCTGCCGCCTCAGGTGGTTTTTGaa < 1:7798306/35‑1 (MQ=255) | CGCGCCCTGGAAATCATCAGCGAGCTGGCGGCGAAACAACTTAGCCTGCCGCCTCAGGTGGTTTTTGAA > REL606/3281900‑3281968 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |