New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 489053 =105 (1.020)9 (0.100) 5/42 NT 12.3% coding (303/780 nt) ybbM predicted inner membrane protein
?REL606 3821518 = 37 (0.410)coding (910/1323 nt) glvG predicted 6‑phospho‑beta‑glucosidase

Only 100 of 183 total aligned reads displayed.

AAGCTTTTATCTCATCGTTTATTGCCATTACGGTCGGGGCGGGAATTACCCTGGCGGTGCTGATTCTCT  >  REL606/489019‑489087
                                  |                                  
aaacaggttttcgatgcttgccgcgccattacggc                                    <  1:19344116‑M1/1‑1 (MQ=255)
aaGCTTTTATCTCATCGTTTATTGCCATTACGGTc                                    >  1:9021519/1‑35 (MQ=255)
aaGCTTTTATCTCATCGTTTATTGCCATTACGGTc                                    >  1:1727102/1‑35 (MQ=255)
aaGCTTTTATCTCATCGTTTATTGCCATTACGGTc                                    <  1:1295740/35‑1 (MQ=255)
aaGCTTTTATCTCATCGTTCATTGCCATTACGGTc                                    >  1:11440563/1‑35 (MQ=255)
 aacaggttttcgatgcttgccgcgccattacggcg                                   <  1:3615632‑M1/2‑1 (MQ=255)
 aacaggttttcgatgcttgccgcgccattacggcg                                   >  1:4189194‑M1/34‑35 (MQ=255)
 aGCTTTTATCTCATCGTTTATTGCCATTACGGTCg                                   <  1:18877585/35‑1 (MQ=255)
 aGCTTTTATCTCATCGTTTATTGCCATTACGGTCg                                   <  1:6432652/35‑1 (MQ=255)
 aGCTTTTATATCATCGTTTATTGCCATTACGGTCg                                   <  1:3484917/35‑1 (MQ=255)
  gCTTTTATCTCATCGTTTATTGCCATTACGGTCgg                                  <  1:15619358/35‑1 (MQ=255)
  gCTTTTATCTCATCGTTTATTGCCATTACGGTCgg                                  >  1:16489821/1‑35 (MQ=255)
  gCTTTTATCTCATCGTTTATTGCCATTACGGTCgg                                  <  1:423498/35‑1 (MQ=255)
  gCTTTTATCTCATCGTTTATTGCCATTACGGTCgg                                  >  1:4991014/1‑35 (MQ=255)
  gCTTTTATCTCATCGTTTATTGCCATTACGGTCgg                                  <  1:1132219/35‑1 (MQ=255)
  acagtttttcgatgcttgccgcgccattacggcgg                                  <  1:17421930‑M1/3‑1 (MQ=255)
  acaggttttcgatgcttgccgcgccattacggcgg                                  <  1:10315180‑M1/3‑1 (MQ=255)
  acaggttttcgatgcttgccgcgccattacggcgg                                  >  1:19955703‑M1/33‑35 (MQ=255)
   caggttttcgatgcttgccgcgccattacggcggg                                 <  1:13874827‑M1/4‑1 (MQ=255)
   caggttttcgatgcttgccgcgccattacggcggg                                 <  1:13773897‑M1/4‑1 (MQ=255)
   cTTTTATCTCATCGTTTATTGCCATTACGGTCggg                                 >  1:17499873/1‑35 (MQ=255)
   cTTTTATCTCATCGTTTATTGCCATTACGGTCggg                                 >  1:18294336/1‑35 (MQ=255)
   cTTTTATCTCATCGTTTATTGCCATTACGGTCggg                                 >  1:20417335/1‑35 (MQ=255)
   cTTTTATCTCATCGTTTATTGCCATTACGGTCggg                                 <  1:3170402/35‑1 (MQ=255)
    aggttttcgatgcttgccgcgccattacggcgggg                                <  1:16937886‑M1/5‑1 (MQ=255)
    aggttttcgatgcttgccgcgccattaccgcgggg                                <  1:31212‑M1/5‑1 (MQ=255)
     tttATCTCATCGTTTATTGCCATTACGGTCGGGGc                               <  1:10554074/35‑1 (MQ=255)
     tttATCTCATCGTTTATTGCCATTACGGTCGGGGc                               <  1:568640/35‑1 (MQ=255)
      ttATCTCATCGTTTATTGCCATTACGGTCGGGGCg                              <  1:16029514/35‑1 (MQ=255)
      ttATCTCATCGTTTATTGCCATTACGGTCGGGGCg                              >  1:717826/1‑35 (MQ=255)
      gttttcgatgcttgccgcgccattacggcgggggg                              <  1:10213543‑M1/7‑3 (MQ=255)
       ttttcgatgcttgccgcgccattacggcggggggg                             <  1:20534220‑M1/8‑4 (MQ=255)
        tttcgatgcttgccgcgccattacggcgggggggg                            <  1:10013434‑M1/9‑1 (MQ=255)
        aTCTCATCGTTTATTGCCATTACGGTCGGGGCggg                            >  1:4008173/1‑35 (MQ=255)
         ttcgatgcttgccgcgccattacggCGGGGGGGGa                           <  1:7494670‑M1/10‑1 (MQ=255)
         tctcATCGTTTATTGCCATTACGGTCGGGGCgggg                           >  1:16818986/1‑34 (MQ=255)
         tctcATCGTTTATTGCCATTACGGACGGGGCgggg                           >  1:7867023/1‑34 (MQ=255)
          ctcATCGTTTATTGCCATTACGGTCGGGGCgggga                          >  1:18577816/1‑33 (MQ=255)
          ctcATCGTTTATTGCCATTACGGTCGGGGCgggga                          >  1:8748326/1‑33 (MQ=255)
          ctcATCGTTTATTGCCATTACGGTCGGGGCGGGaa                          >  1:1121243/1‑35 (MQ=255)
          ctcATCGTTTATTGCCATTACGGTCGGGGCGGGaa                          <  1:7866201/35‑1 (MQ=255)
           tcATCGTTTATTGCCATTACGTTCGGGGCGGGAAt                         >  1:5442956/1‑35 (MQ=255)
           tcATCGTTTATTGCCATTACGGTCGGGGCGTGAAt                         >  1:5091451/1‑35 (MQ=255)
           tcATCGTTTATTGCCATTACGGTCGGGGCGGGAAt                         <  1:137747/35‑1 (MQ=255)
            gatgcttgccgcgccattacggCGGGGGGGGAAtt                        <  1:13248822‑M1/13‑1 (MQ=255)
            gatgcttgccgcgccattacggCGGGGGGGGAAtt                        <  1:20547457‑M1/13‑1 (MQ=255)
            cATCGTTTATTGCCATTACGGTCGGGGCGGGGAtt                        >  1:16076070/1‑35 (MQ=255)
            cATCGTTTATTGCCATTACGGTCGGGGCGGGGAtt                        >  1:4776315/1‑35 (MQ=255)
            cATCGTTTATTGCCATTACGGTCGGGGCGGGAAtt                        <  1:12209101/35‑1 (MQ=255)
             atgcttgccgcgccattacggCGGGGGGGGAATTa                       <  1:3095416‑M1/14‑1 (MQ=255)
             aTCGTTTATTGCCATTACGGTCGGGGCGGGGATTa                       >  1:10020283/1‑35 (MQ=255)
             aTCGTTTATTGCCATTACGGTCGGGGCGGGGATTa                       >  1:15931962/1‑35 (MQ=255)
             aTCGTTTATTGCCATTACGGTCGGGGCGGGGATTa                       >  1:13343030/1‑35 (MQ=255)
             aTCGTTTATTGCCATTACGGTCGGGGCGGGAATTa                       <  1:15431431/35‑1 (MQ=255)
             aTCGTTTATTGCCATTACGGTCGGGGCGGGAATTa                       <  1:12072081/35‑1 (MQ=255)
             aTCGTTTATTGCCATTACGGTCGGGGCGGGAATTa                       <  1:9177463/35‑1 (MQ=255)
             aTCGTTTATTGCCATTACGGTCGGGGCGGGAATTa                       <  1:14681293/35‑1 (MQ=255)
             aTCGTTTAATGCCATTACGGTCGGGGCTGGGATTa                       >  1:8477451/1‑35 (MQ=25)
              tCGTTTATTGCCATTACGGTCGGGGCGGGAATTAc                      >  1:5501491/1‑35 (MQ=255)
              tCGTTTATTGCCATTACGGTCGGGGCGGGAATTAc                      <  1:6218236/35‑1 (MQ=255)
               cGTTTATTGCCATTACGGTCGGGGCGGGAATTAcc                     >  1:4525210/1‑35 (MQ=255)
               cGTTTATTGCCATTACGGTCGGGGCGGGAATTAcc                     >  1:2818495/1‑35 (MQ=255)
                gTTTATTGCCATTACGGTCGGGGCGGGGATTAccc                    >  1:949530/1‑35 (MQ=255)
                gTTTATTGCCATTACGGTCGGGGCGGGAATTAccc                    <  1:19518525/35‑1 (MQ=255)
                 tttATTGCCATTACGGTCGGGGCGGGGATTACCCt                   >  1:18003971/1‑35 (MQ=255)
                 tttATTGCCATTACGGTCGGGGCGGGAATTAcccc                   >  1:13950887/1‑34 (MQ=255)
                 tttATTGCCATTACGGTCGGGGCGGGAATTACCCt                   <  1:20127314/35‑1 (MQ=255)
                 tttATTGCCATTACGGTCGGGGCGGGAATTACCCt                   <  1:17554168/35‑1 (MQ=255)
                 tttATTGCCATTACGGTCGGGGCGGGAATTACCCt                   >  1:14631701/1‑35 (MQ=255)
                  ttATTGCCATTACGGTCGGGGCGGGAATTACCCTg                  <  1:5091183/35‑1 (MQ=255)
                  ttATTGCCATTACGGTCGGGGCGGGAATTACCCTg                  <  1:13213327/35‑1 (MQ=255)
                  ttATTGCCATTACGGTCGGGGCGGGAATTACCCTg                  <  1:17333434/35‑1 (MQ=255)
                   tATTGCCATTACTGTCGGGGCGGGGATTACCCTgg                 >  1:8740990/1‑35 (MQ=37)
                   tATTGCCATTACGGTCGGGGCGGGAATTACCCTgg                 >  1:12664334/1‑35 (MQ=255)
                   tATTGCCATTACGGTCGGGGCGGGAATTACCCTgg                 <  1:12761735/35‑1 (MQ=255)
                   tATTGCCATTACGGTCGGGGCGGGAATTACCCTgg                 <  1:18519469/35‑1 (MQ=255)
                   tATTGCCATTACGGTCGGGGCGGGAATTACCCTgg                 <  1:14449407/35‑1 (MQ=255)
                    aTTGCCATTACGGTCGGGGCGGGAATTACCCTGGc                >  1:11818980/1‑35 (MQ=255)
                    aTTGCCATTACGGTCGGGGCGGGAATTACCCTGGc                >  1:10987819/1‑35 (MQ=255)
                     ttGCCATTACGGTCGGGGCGGGAATTACCCTGGCg               <  1:12351331/35‑1 (MQ=255)
                     ttGCCATTACGGTCGGGGCGGGAATTACCCTGGCg               <  1:13376636/35‑1 (MQ=255)
                     ttGCCATTACGGTCGGGGCGGGAATTACCCCGGCg               >  1:7674843/1‑35 (MQ=255)
                      tGCCATTACGGTCGGGGCGGGAATTACCCTGGCgg              >  1:12131830/1‑35 (MQ=255)
                      tGCCATTACGGTCGGGGCGGGAATTACCCTGGCgg              <  1:14737459/35‑1 (MQ=255)
                       gCCATTACGGTCGGGGCGGGAATTATCCTCGCggg             >  1:16395975/1‑34 (MQ=37)
                       gCCATTACGGTCGGGGCGGGAATTACCCTGGCGGt             <  1:9707021/35‑1 (MQ=255)
                       gCCATTACGGTCGGGGCGGGAATTACCCTGGCGGt             <  1:14972823/35‑1 (MQ=255)
                        ccATTACGGTCGGGGCGGGAATTACCCTGGCGGTg            <  1:14337612/35‑1 (MQ=255)
                        ccATTACGGTCGGGGCGGGAATTACACTGGCGGTg            <  1:13490391/35‑1 (MQ=255)
                         cATTACGGTCGGGGTGGGAATTACCCTGGCggggg           >  1:769095/1‑32 (MQ=37)
                          aTTACGGTCGGGGCGGGAATTACCCTGGCGGTGCt          <  1:16850801/35‑1 (MQ=255)
                          aTTACGGTCGGGGCGGGAATTACCCTGGCGGTGCt          <  1:9739271/35‑1 (MQ=255)
                           ttACGGTCGGGGCGGGAATTACCCTGGCGGTGCTg         <  1:6685760/35‑1 (MQ=255)
                           ttACGGTCGGGGCGGGAATTACCCTGGCGGTGCTg         <  1:9535015/35‑1 (MQ=255)
                              cGGTCGGGGCGGGAATTACCCTGGCGGTGCTGAtt      <  1:15517945/35‑1 (MQ=255)
                              aggTCGGGGCGGGAATTACCCTGGCGGTGCTGAtt      <  1:820905/34‑1 (MQ=255)
                                gTCGGGGCGGGAATTACCCTGGCGGTGCTGATtct    <  1:11730541/35‑1 (MQ=255)
                                gTCGGGGCGGGAATTACCCTGGCGGTGCTGATtct    <  1:1865484/35‑1 (MQ=255)
                                 tCGGGGCGGGAATTACCCTGGCGGTGCTGATtctc   <  1:419374/35‑1 (MQ=255)
                                  CGGGGCGGGAATTACCCTGGCGGTGCTGATtctct  >  1:2944131‑M1/1‑35 (MQ=255)
                                  |                                  
AAGCTTTTATCTCATCGTTTATTGCCATTACGGTCGGGGCGGGAATTACCCTGGCGGTGCTGATTCTCT  >  REL606/489019‑489087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.