New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1924962 = | 56 (0.540) | 10 (0.100) | 4/48 | NT | 12.3% | intergenic (‑216/‑59) | ruvA/yebB | Holliday junction DNA helicase motor protein/hypothetical protein |
? | REL606 | = 2078183 | 86 (0.840) | coding (1712/3306 nt) | yegE | predicted diguanylate cyclase, GGDEF domain signalling protein |
AAAATTTATTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1924975‑1924962 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCGCCATATCAATACAGACCACGGCTTCACC < REL606/2078183‑2078152 AAAATTTATTTTTTTTCGCCATATCAATACAGACC < 1:3755659/35‑1 AATTTATTTTTTTTCGCCATATCAATACAGACCAC < 1:19771840/35‑1 gTTTATTTTTTTTCGCCATATCAATACAGACCACG < 1:10485714/34‑1 gTTATTTTTTTTCGCCATATCAATACAGACCACGG < 1:4708753/34‑1 TATTTTTTTTCGCCATATCAATACAGACCACGGCT < 1:14398271/35‑1 tTTTTTTTTCGCCATATCAATACAGACCACGGCTT < 1:11169321/34‑1 TTTTTTTTCGCCATATCAATACAGACCACGGCTTC < 1:14781394/35‑1 TTTTTTTTCGCCATATCAATACAGACCACGGCTTC < 1:18501860/35‑1 TTTTTTTTCGCCATATCAATACAGACCACGGCTTC < 1:4540234/35‑1 TTTTTTTTCGCCATATCAATACAGACCACGGCTTC < 1:9870383/35‑1 TTTTTTTCGCCATATCAATACAGACCACGGCTTCA < 1:18675770/35‑1 TTTTTTCGCCATATCAATACAGACCACGGCTTCAC < 1:8758845/35‑1 TTTTTCGCCATATCAATACAGACCACGGCTTCACC < 1:14541309/35‑1 TTTTTCGCCATATCAATACAGACCACGGCTTCACC < 1:17291426/35‑1 AAAATTTATTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1924975‑1924962 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCGCCATATCAATACAGACCACGGCTTCACC < REL606/2078183‑2078152 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |