New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 610886 = | 57 (0.550) | 19 (0.260) | 4/34 | NT | 28.5% | coding (485/858 nt) | entB | isochorismatase |
? | REL606 | 1306336 = | 55 (0.760) | intergenic (‑97/+274) | cls/kch | cardiolipin synthetase/voltage‑gated potassium channel |
Only 100 of 107 total aligned reads displayed.
TGCCACCATAAACGGTTTAATATCGCGCATAAATGCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/610926‑610886 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtcggGGGCGGGGGTATAATGACCATTCTGTTATTGCAT > REL606/1306336‑1306369 tcCCACCATAAACGGTTTAATATCGCGCATAAATG < 1:10655623/33‑1 TGCCACCATAAACGGTTTAATATCGCGCATAAATG > 1:3648468/1‑35 TGCCACCATAAACGGTTTAATATCGCGCATAAATG < 1:18655009/35‑1 TGCCACCATAAACGGTTTAATATCGCGCATAAATG > 1:16517406/1‑35 TGCCACCATAAACGGTTTAATATCGCGCATAAATG > 1:13449508/1‑35 GCCACCATAAACGGTTTAATATCGCGCATAAATGC > 1:3568585/1‑35 GCCACCATAAACGGTTTAATATCGCGCATAAATGC < 1:4768338/35‑1 GCCACCATAAACGGTTTAATATCGCGCATAAATGC > 1:17983669/1‑35 GCCACCATAAACGGTTTAATATCGCGCATAAATGC < 1:7052864/35‑1 GCCACCATAAACGGTTTAATATCGCGCATAAATGC > 1:7337762/1‑35 GCCACCATAAACGGTTTAATATCGCGCATAAATGC > 1:11589150/1‑35 CCACCATAAACTGTTTAATATCGCGCATAAATGCG > 1:14148360/1‑35 CCACCATAAACGGTTTAATATCGCGCATAAATGCG < 1:956775/35‑1 CCACCATAAACGGTTTAATATCGCGCATAAATGCG < 1:8682641/35‑1 CCACCATAAACGGTTTAATATCGCGCATAAATGCG > 1:18936711/1‑35 CCACCATAAACGGTTTAATATCGCGCATAAATGCG < 1:5860687/35‑1 CCACCATAAACGGTTTAATATCGCGCATAAATGCG > 1:11016559/1‑35 CCACCATAAACGGTTTAATATCGCGCATAAATGCG > 1:13913865/1‑35 CCACCATAAACGGTTTAATATCGCGCATAAATGCG < 1:7379741/35‑1 CACCATAAACGGTTTAATATCGCGCATAAATGCGT > 1:17854859/1‑35 CACCATAAACGGTTTAATATCGCGCATAAATGCGT > 1:16740235/1‑35 CACCATAAACGGTTTAATATCGCGCATAAATGCGT < 1:143808/35‑1 CACCATAAACGGTTTAATATCGCGCATAAATGCGT > 1:7591909/1‑35 CACCATAAACGGTTTAATATCGCGCATAAATGCGT < 1:8668228/35‑1 ACCATAAACGGTTTAATATCGCGCATAAATGCGTC < 1:1221130/35‑1 ACCATAAACGGTTTAATATCGCGCATAAATGCGTC > 1:8985049/1‑35 ACCATAAACGGTTTAATATCGCGCATAAATGCGTC < 1:2031739/35‑1 ACCATAAACGGTTTAATATCGCGCATAAATGCGTC > 1:12298881/1‑35 ACCATAAACGGTTTAATATCGCGCATAAATGCGTC > 1:8585970/1‑35 ACCATAAACGGTTTAATATCGCGCATAAATGCGTC < 1:13025510/35‑1 ACCATAAACGGTTTAATATCGCGCATAAATGCGTC < 1:16594376/35‑1 ACCATAAACGGTTTAATATCGCGCATAAATGCGTC < 1:13790124/35‑1 CCATAAACGGTTTAATATCGCGCATAAATGCGTCG < 1:7964274/35‑1 CCATAAACGGTTTAATATCGCGCATAAATGCGTCG > 1:18284479/1‑35 CCATAAACGGTTTAATATCGCGCATAAATGAGTCG < 1:7633591/35‑1 CCATAAACGGTTTAATATAGCGCATAAATGCGTCG < 1:9343821/35‑1 CATAAACGGTTTAATATCGCGCATAAATGCGTCGG < 1:19614876/35‑1 CATAAACGGTTTAATATCGCGCATAAATGCGTCGG > 1:11457015/1‑35 CATAAACGGTTTAATATCGCGCATAAATGCGTCGG < 1:6734060/35‑1 CATAAACGGTTTAATATCGCGCATAAATGCGTCGG < 1:8947597/35‑1 TAAACGGTTTAATATCGCGCATAAATTCGTCGGGt > 1:16622759/1‑34 TAAACGGTTTAATATCGCGCATAAATGCGTCGGcg > 1:15723336/1‑33 TAAACGGTTTAATATCGCGCATAAATGCGTCGGGG > 1:4026768/1‑35 AAACGGTTTAATATCGCGCATAAATGCGTCGGGGG > 1:14924612/1‑35 AAACGGTTTAATATCGCGCATAAATGCGTCGGGGG > 1:16916912/1‑35 AACGGTTTAATATCGCGCATAAATGCGTCGGGGGg > 1:3342856/1‑34 AACGGTTTAATATCGCGCATAAATGCGTCGGGGGg > 1:5961157/1‑34 AACGGTTTAATATCGCGCATAAATGCGTCGGGGGg > 1:14816966/1‑34 AACGGTTTAATATCGCGCATAAATGCGTCGGGGGg > 1:8895496/1‑34 ACGGTTTAATATCGCGCATAAATGCGTCGGGGGgg > 1:2395777/1‑33 CGGTTTAATATCGCGCATAAATGCGTCGGGGGgcg > 1:1592207/1‑32 CGGTTTAATATCGCGCATAAATGCGTCGGGGGGGG > 1:12070471/1‑35 CGGTTTAATATCGCGCATAAATGCGTCGGGGGGGG > 1:564741/1‑35 CGGTTTAATATCGCGCATAAATGCGTCGGGGGGGG > 1:16847295/1‑35 GGTTTAATATCGCGCATAAATGCGTCGGGGGGGGG > 1:242420/1‑35 GGTTTAATATCGCGCATAAATGCGTCGGGGGGGGG > 1:14125139/1‑35 GGTTTAATATCGCGCATAAATGCGTCGGGGGGGGG > 1:5156231/1‑35 GGTTTAATATCGCGCATAAATGCGTCGGGGGGGGG > 1:1696332/1‑35 GGTTTAATATCGCGCATAAATGCGTCGGGGGGGGG > 1:18222684/1‑35 GGTTTAATATCGCGCATAAATGCGTCGGGGGCGGG > 1:5368361/1‑35 GTTTAATATCGCGCATAAATGCGTCGGGGGGGGGG > 1:8375646/1‑35 GTTTAATATCGCGCATAAATGCGTCGGGGGGGGGG > 1:10177065/1‑35 TTTAATATCGCGCATAAATGCGTCGGGGGGGGGGG > 1:10998283/1‑35 TTTAATATCGCGCATAAATGCGTCGGGGGGGGGGG > 1:12067980/1‑35 TTTAATATCGCGCATAAATGCGTCGGGGGGGGGGG > 1:4924808/1‑35 TTTAATATCGCGCATAAATGCGTCGGGGGGGGGGG > 1:1225908/1‑35 TTTAATATCGCGCATAAATGCGTCGGGGGGGGGGG > 1:2256202/1‑35 TTTAATATCGCGCATAAATGCGTCGGGGGGGGGGG > 1:12267700/1‑35 TTAATATCGCGCATAAATGCGTCGGGGGGGGGGGg > 1:8087375/1‑34 GCGTCGGGGGCGGGGGTATAATGACCATTCTGTTA < 1:11441430/35‑1 GCGTCGGGGGCGGGGGTATAATGACCATTCTGTTA > 1:13582595/1‑35 GCGTCGGGGGCGGGGGTATAATGACCATTCTGTTA < 1:13663117/35‑1 GCGTCGGGGGCGGGGGTATAATGACCATTCTGTTA < 1:18655143/35‑1 CGTCGGGGGCGGGGGTATAATGACCATTCTGTTAT < 1:3300669/35‑1 CGTCGGGGGCGGGGGTATAATGACCATTCTGTTAT > 1:13661356/1‑35 CGTCGGGGGCGGGGGGATAATGACCATTCTGTTAT > 1:8628107/1‑35 GTCGGGGGCGGGGGTATAATGACCATTCTGTTATT < 1:6816632/35‑1 GTCGGGGGCGGGGGTATAATGACCATTCTGTTATT < 1:8926571/35‑1 GTCGGGGGCGGGGGTATAATGACCATTCTGTTATT < 1:13111540/35‑1 GTCGGGGGCGGGGGTATAATGACAATTCTGTTATT < 1:2386677/35‑1 TCGGGGGCGTGGGTATAATGACCATTCTGTTATTG > 1:9292607/1‑35 TCGGGGGCGGGGGTATAATGACCATTCTGTTATTG < 1:6028338/35‑1 TCGGGGGCGGGGGTATAATGACCATTCTGTTATTG < 1:10919307/35‑1 TCGGGGGCGGGGGTATAATGACCATTCTGTTATTG < 1:6182135/35‑1 TCGGGGGCGGGGGTATAATGACCATTCTGTTATTG < 1:8047265/35‑1 CGGGGGCGGGGGTATAATGACCATTCTGTTATTGC < 1:12757251/35‑1 CGGGGGCGGGGGTATAATGACCATTCTGTTATTGC < 1:13019764/35‑1 CGGGGGCGGGGGTATAATGACCATTCTGTTATTGC < 1:1778674/35‑1 CGGGGGCGGGGGTATAATGACCATTCTGTTATTGC < 1:17283776/35‑1 GGGGGCGGGGGTATAATGACCATTCTGTTATTGCc > 1:20087150/1‑34 GGGGGCGGGGGTATAATGACCATTCTGTTATTGCA > 1:20552309/1‑35 GGGGGCGGGGGTATAATGACCATTCTGTTATTGCA < 1:51545/35‑1 GGGGGCGGGGGTATAATGACCATTCTGTTATTGCA < 1:8807097/35‑1 GGGGGCGGGGGTATAATGACCATTCTGTTATTGCA < 1:2275497/35‑1 GGGGGCGGGGGTATAATGACCATTCTGTTATTGCA > 1:15739156/1‑35 GGGGGCGGGGGTATAATGACCATTCTGTTATTGCA > 1:6036567/1‑35 GGGGCTGGGGTATAATGACCATTCTGTTATTGCAT > 1:17250216/1‑35 GGGGCGGGGTTATAATGACCATTCTGTTATTGCAT < 1:3623919/35‑1 GGGGCGGGGGTATAATGACCATTCTGTTATTGCAT > 1:6451332/1‑35 GGGGCGGGGGTATAATGACCATTCTGTTATTGCAT > 1:9402648/1‑35 TGCCACCATAAACGGTTTAATATCGCGCATAAATGCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/610926‑610886 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtcggGGGCGGGGGTATAATGACCATTCTGTTATTGCAT > REL606/1306336‑1306369 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |