New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1054933 | 86 (0.840) | 11 (0.120) | 4/44 | NT | 9.8% | coding (103/1545 nt) | appC | cytochrome bd‑II oxidase, subunit I |
? | REL606 | = 3766502 | 123 (1.310) | coding (1206/1206 nt) | gltS | glutamate transporter |
Only 100 of 150 total aligned reads displayed.
ACCCCTTACCCTGGGGCTGATTTTTTTGCTGGCTATTATGGAAACCATTTACGTGGTCACCGGCAAAAC > REL606/1054899‑1054967 | aCCCCTTACCCTGGGGCTGATTTTTTTGCTGGCTA < 1:3115289‑M1/35‑1 (MQ=255) aCCCCTTACCCTGGGGCTGATTTTTTTGCTGGCTA < 1:3417765‑M1/35‑1 (MQ=255) aCCCCTTACCCTGGGGCTGATTTTTTTGCTGGCTA < 1:4665715‑M1/35‑1 (MQ=255) ccccTTACCCTGGGGCTGATTTTTTTGCTGGCtat < 1:18444461/35‑1 (MQ=255) ccccTTACCCTGGGGCTGATTTTTTTGCTGGCtat < 1:12933444/35‑1 (MQ=255) ccccTTACCCTGGGGCTGATTTTTTTGCTGGCTAa > 1:10285532‑M1/1‑34 (MQ=255) ccccTTACCCTGGGGCTGATTTTTTTGCTGGAtat < 1:16576522/35‑1 (MQ=255) cccTTACCCTGGGGCTGATTTTTTTGCTGGCtatt < 1:3283979/35‑1 (MQ=255) cccTTACCCTGGGGCTGATTTTTTTGCTGGCtatt < 1:1407745/35‑1 (MQ=255) cccTTACCCTGGGGCTGATTTTTTTGCTGGCTAaa > 1:13721282‑M1/1‑33 (MQ=255) ccTTACCCTGGGGCTGATTTTTTTGCTGGCtatta < 1:18612416/35‑1 (MQ=255) ccTTACCCTGGGGCTGATTTTTTTGCTGGCTAaaa > 1:14733607‑M1/1‑32 (MQ=255) ccTTACCCTGGGGCTGATTTTTTTGCTGGCTAaaa > 1:9718308‑M1/1‑32 (MQ=255) cTTACCCTGGGGCTGATTTTTTTGCTGGCtattat < 1:4080322/35‑1 (MQ=255) attACCCTGGGGCTGATTTTTTTGCTGGCtattat < 1:3690065/34‑1 (MQ=255) ttACCCTGGGGCTGATTTTTTTGCTGGCTAaaata > 1:13794526‑M1/1‑30 (MQ=255) ttACCCTGGGGCTGATTTTTTTGCTGGCTATTATg < 1:7536917/35‑1 (MQ=255) tACGCTGGGGCTGATTTTTTTGCTGGCTATTATgg < 1:15938455/35‑1 (MQ=255) tACCCTGGGGCTGATTTTTTTGCTGGCTAaaaata > 1:15394268‑M1/1‑29 (MQ=255) tACCCTGGGGCTGATTTTTTTGCTGGCTATTATgg < 1:2608030/35‑1 (MQ=255) tACCCTGGGGCTGATTTTTTTGCTGGCTATTATgg < 1:8845206/35‑1 (MQ=255) aCCCTGGGGCTGATTTTTTTGCTGGCTATTATGGa < 1:11202426/35‑1 (MQ=255) cccTGGGGCTGATTTTTTTGCTGGCTAataatgaa > 1:15561178‑M1/1‑27 (MQ=255) ccTGGGGCTGATTTTTTTGCTGGCTAataatgaaa > 1:6001951‑M1/1‑26 (MQ=255) ccTGGGGCTGATTTTTTTGCTGGCTAaaattgaaa > 1:20311894‑M1/1‑26 (MQ=255) ccTGGGGCTGATTTTTTTGCTGGCTAaaattgaaa > 1:16346057‑M1/1‑26 (MQ=255) ccTGGGGCTGATTTTTTTGCTGGCTAaaaatgaaa > 1:70090‑M1/1‑26 (MQ=255) ccTGGGGCTGATTTTTTTGCTGGCTATTATGGaaa < 1:14148319/35‑1 (MQ=255) ccTGGGGCTGATTTTTTTGCTGGCTATTATGGaaa < 1:4757869/35‑1 (MQ=255) ccTGGGGCTGATTTTTTTGCTGGCTAATATAGaaa > 1:13432951/1‑35 (MQ=37) cTGGGGCTGATTTTTTTGCTGGCTATTATGGaacc < 1:16432451/35‑3 (MQ=255) cTGGGGCTGATTTTTTTGCTGGCTATTATGGAAAc < 1:1234936/35‑1 (MQ=255) cTGGGGCTGATTTTTTTGCTGGCTATTATGGAAAc < 1:18727396/35‑1 (MQ=255) cTGGGGCTGATTTTTTTGCTGGCTATTATGGAAAc < 1:17899632/35‑1 (MQ=255) tGGGGCTGATTTTTTTGCTGGCTAaaattgaaaac > 1:8033628‑M1/1‑24 (MQ=255) tGGGGCTGATTTTTTTGCTGGCTAaaaatgaaaaa > 1:6705855‑M1/1‑24 (MQ=255) tGGGGCTGATTTTTTTGCTGGCTATTATGGAAAcc < 1:12312390/35‑1 (MQ=255) tGGGGCTGATTTTTTTGCTGGCTATTATGGAAAcc < 1:13796910/35‑1 (MQ=255) tGGGGCTGATTTTTTTGCTGGCTAATAAAGaaaac > 1:5565190/1‑33 (MQ=18) ggggCTGATTTTTTTGCTGGCTAaaaatgaaaaaa > 1:1317822‑M1/1‑23 (MQ=255) ggggCTGATTTTTTTGCTGGCTATTATGGAAACCn < 1:17787760/35‑1 (MQ=255) gggCTGATTTTTTTGCTGGCTAaaaatgaaaacaa > 1:7677693‑M1/1‑22 (MQ=255) gggCTGATTTTTTTGCTGGCTATTATGGAAACCAt < 1:19629452/35‑1 (MQ=255) gggCTGATTTTTTTGCTGGCTAAAATTGAAAcaaa > 1:2145795/1‑32 (MQ=16) ggCTGATTTTTTTGCTGGCTATTATGGAAACCAtt < 1:7213430/35‑1 (MQ=255) ggCTGA‑TTTTTTGCTGGCTATTATGGAAACCAttt < 1:13466182/35‑1 (MQ=37) cTGATTTTTTTGCTGGCTATTATGGAAACCATTTa < 1:14886054/35‑1 (MQ=255) cTGATTTTTTTGCTGGCTATTATGGAAACCATTTa < 1:2458060/35‑1 (MQ=255) cTGATTTTTTTGCTGGCTATTATGGAAACCATTTa < 1:19142506/35‑1 (MQ=255) cTGATTTTTTTGCTGGCTATTATGGAAACCATTTa < 1:19511905/35‑1 (MQ=255) tGATTTTTTTGCTGGCTATTATGGAAACCATTTAc < 1:9670800/35‑1 (MQ=255) tGATTTTTTTGCTGGCTATTATGGAAACCATTTAc < 1:5804193/35‑1 (MQ=255) tGATTTTTTTGCTGGCTATTATGGAAACCATTTAc < 1:20524184/35‑1 (MQ=255) tGATTTTTTTGCTGGCTATTATGGAAACCATTTAc < 1:193662/35‑1 (MQ=255) tGATTTTTTTGCTGGCTATTATGGAAACCATTTAc < 1:12112326/35‑1 (MQ=255) tGATTTTTTTGCTGGCTATTATGGAAACCATTTAc < 1:14051034/35‑1 (MQ=255) gATTTTTTTGCTGGCTATTATGGAAACCATTTACg < 1:5446836/35‑1 (MQ=255) gATTTTTTTGCTGGCTATTATGGAAACCATTTACg < 1:15658948/35‑1 (MQ=255) gATTTTTTTGCTGGCTATTATGGAAACCATTTACg < 1:17119563/35‑1 (MQ=255) gATTTTTTTGCTGGCTATTATGGAAACCATTTACg < 1:5628428/35‑1 (MQ=255) aTTTTTTTGCTGGCTATTATGGAAACCATTTACGt < 1:4095923/35‑1 (MQ=255) tttttttGCTGGCTATTATGGAAACCATTTACGTg < 1:4057783/35‑1 (MQ=255) ttttttGCTGGCTATTATGGAAACCATTTACGTgg < 1:5424167/35‑1 (MQ=255) tttttGCTGGCTATTATGGAAACCATTTACGTGGt < 1:14796226/35‑1 (MQ=255) ttttGCTGGCTATTATGGAAACCATTTACGTGGTc < 1:5772643/35‑1 (MQ=255) ttttGCTGGCTATTATGGAAACCATTTACGTGGTc < 1:12130758/35‑1 (MQ=255) ttttGCTGGCTATTATGGAAACCATTTACGTGGTc < 1:6280922/35‑1 (MQ=255) ttttGCTGGCTATTATGGAAACCATTTACGTGGTc < 1:11862900/35‑1 (MQ=255) ttttGCTGGCTATTATGGAAACCATTTACGTGGTc < 1:7963812/35‑1 (MQ=255) tttGCTGGCTATTATGGAAACCATTTACGTGGTCa < 1:8556531/35‑1 (MQ=255) tttGCTGGCTATTATGGAAACCATTTACGTGGTCa < 1:9243952/35‑1 (MQ=255) ttGCTTGCTATTATGGAAACCATTTACGTGGTCAc < 1:19593542/35‑1 (MQ=255) ttGCTGGCTATTATGGAAACCATTTACGTGGTCAc < 1:14356434/35‑1 (MQ=255) ttGCTGGCTATTATGGAAACCATTTACGTGGTCAc < 1:10174453/35‑1 (MQ=255) ttGCTGGCTATTATGGAAACCATTTACGTGGTCAc < 1:11616135/35‑1 (MQ=255) gCTGGCTATTATGGAAACCATTTACGTGGTCACCg < 1:15510200/35‑1 (MQ=255) gCTGGCTATTATGGAAACCATTTACGTGGTCACCg < 1:19004716/35‑1 (MQ=255) cTGGCTATTATGGAAACCATTTACGTGGTCACCgg < 1:4017505/35‑1 (MQ=255) cTGGCTATTATGGAAACCATTTACGTGGTCACCgg < 1:5957578/35‑1 (MQ=255) cTGGCTATTATGGAAACCATTTACGTGGTCACCgg < 1:18513173/35‑1 (MQ=255) ggCTATTATGGAAACCATTTACGTGGTCACCGGCa < 1:9563440/35‑1 (MQ=255) ggCTATTATGCAAACCATTTACGTGGTCACCGGCa > 1:8771101/1‑35 (MQ=255) gCTATTATGGAAACCATTTACGTGGTCACCGGCaa < 1:13595797/35‑1 (MQ=255) gCTATTATGGAAACCATTTACGTGGTCACCGGCaa > 1:11283958/1‑35 (MQ=255) cTATTATGGAAACCATTTACGTGGTCACCGTCaaa > 1:20133191/1‑35 (MQ=255) cTATTATGGAAACCATTTACGTGGTCACCGGCaaa > 1:10129001/1‑35 (MQ=255) cTATTATGGAAACCATTTACGTGGTCACCGGCaaa < 1:11946981/35‑1 (MQ=255) cTATTATGGAAACCATTTACGTGGTCACCGGCaaa < 1:3615699/35‑1 (MQ=255) cTATTATGGAAACCATTTACGTGGTCACCGGCaaa > 1:14220973/1‑35 (MQ=255) tattatGGAAACGATTTACGTGGTCACCGGCaaaa < 1:6904939/35‑1 (MQ=255) tattatGGAAACCATTTACGTGGTCACCGGCaaan < 1:7248475/35‑1 (MQ=255) tattatGGAAACCATTTACGTGGTCACCGGCaaaa > 1:11690599/1‑35 (MQ=255) tattatGGAAACCATTTACGTGGTCACCGGCaaaa > 1:2395991/1‑35 (MQ=255) tattatGGAAACCATTTACGTGGTCACCGGCaaaa > 1:8204339/1‑35 (MQ=255) tattatGGAAACCATTTACGTGGTCACCGGCaaaa > 1:20104987/1‑35 (MQ=255) attatGGAAACCATTTACGTGGTCACCGGCAAAAc > 1:2175086/1‑35 (MQ=255) attatGGAAACCATTTACGTGGTCACCGGCAAAAc > 1:10324839/1‑35 (MQ=255) attatGGAAACCATTTACGTGGTCACCGGCAAAAc < 1:15365706/35‑1 (MQ=255) aaaaatgaaaaagcgtcggaaggaaccggaaacgc > 1:18044455‑M1/1‑1 (MQ=255) aaaaatgaaaaagcgtcggaaggaaccggaaacgc < 1:16745864‑M1/35‑35 (MQ=255) | ACCCCTTACCCTGGGGCTGATTTTTTTGCTGGCTATTATGGAAACCATTTACGTGGTCACCGGCAAAAC > REL606/1054899‑1054967 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |