New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 3676501106 (1.030)13 (0.130) 7/46 NT 12.1% coding (1242/1278 nt) yiaN predicted transporter
?REL606 = 3822225 91 (0.890)coding (203/1323 nt) glvG predicted 6‑phospho‑beta‑glucosidase

TTTGTTTTTATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/3676487‑3676501
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCACCGATCCTGAAGTAGCGTTCAGCGACGTTGA  <  REL606/3822225‑3822192
               |                                  
TTTGTTTTTATTCCCCCCACCGATCCTGAAGTAGC                 <  1:6595206/35‑1
 TTGTTTTTATTCCCCCCACCGATCCTGAAGTAGCG                <  1:20530198/35‑1
  TGTTTTTCTTCCCCCCACCGATCCTGAAGTAGCGT               <  1:12811314/35‑1
  TGTTTTTATTCCCCCCACCGATCCTGAAGTAGCGT               <  1:4635597/35‑1
  TGTTTTTATTCCCCCCACCGATCCTGAAGTAGCGT               <  1:3339658/35‑1
  TGTTTTTAGTCCCCCCACCGATCCTGAAGTAGCGT               <  1:19036717/35‑1
     TTTTATTCCCCCCACCGATCCTGAAGTAGCGTTCA            <  1:7835771/35‑1
     TTTTAGTCCCCCCACCGATCCTGAAGTAGCGTTCA            <  1:55787/35‑1
      TTTATTCCCCCCACCGATCCTGAAGTAGCGTTCAG           <  1:1998616/35‑1
      TTTATTCCCCCCACCGATCCTGAAGTAGCGTTCAG           <  1:1075665/35‑1
      TTTATTCCCCCAACCGATCCTGAAGTAGCGTTCAG           <  1:17846903/35‑1
       TTACTCCCCCCACCGATCCTGAAGTAGCGTTCAGC          <  1:6785496/35‑1
         ataCCCCCCACCGATCCTGAAGTAGCGTTCAGCGA        <  1:645523/32‑1
         acTCCCCCCACCGATCCTGAAGTAGCGTTCAGCGA        <  1:19719489/33‑1
         ATTCCCCCCACCGATCCTGAAGTAGCGTTCAGCGA        <  1:2129155/35‑1
          tcCCCCCCACCGATCCTGAAGTAGCGTTCAGCGAC       <  1:530208/33‑1
          gcCCCCCCACCGATCCTGAAGTAGCGTTCAGCGAC       <  1:19011953/33‑1
           cCCCCCCACCGATCCTGAAGTAGCGTTCAGCGACG      <  1:8193897/34‑1
           cCCCCCCACCGATCCTGAAGTAGCGTTCAGCGACG      <  1:4474945/34‑1
            CCCCCCACCGATCCTGAAGTAGCGTTCAGCGACGT     <  1:9421718/35‑1
            CCCCCCACCGATCCTGAAGTAGCGTTCAGCGACGT     <  1:1986901/35‑1
            CCCCCCACCGATCCTGAAGTAGCGTTCAGCGACGT     <  1:13357283/35‑1
             CCCCCACCGATCCTGAAGTAGCGTTCAGCGACGTT    <  1:6362945/35‑1
             CCCCCACCGATCCTGAAGTAGCGTTCAGCGACGTT    <  1:2135200/35‑1
             CCCCCACCGATCCTGAAGTAGCGTTCAGCGACGTT    <  1:13042206/35‑1
             CCCCCACCGATCCTGAAGTAGCGTTCAGCGACGTT    <  1:868682/35‑1
             CCCCCACCGATCCTGAAGTAGCGTTCAGCGACGTT    <  1:10310554/35‑1
              CCCCACCGATCCTGAAGTAGCGTTCAGCGACGTTG   <  1:14979524/35‑1
               CCCACCGATCCTGAAGTAGCGTTCAGCGACGTTGA  <  1:5862645/35‑1
               CCCACCGATCCTGAAGTAGCGTTCAGCGACGTTGA  <  1:8113231/35‑1
               |                                  
TTTGTTTTTATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/3676487‑3676501
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCACCGATCCTGAAGTAGCGTTCAGCGACGTTGA  <  REL606/3822225‑3822192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.