New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1112140 = | NA (NA) | 14 (0.140) | 5/48 | NT | 35.9% | noncoding (81/88 nt) | serX | tRNA‑Ser |
? | REL606 | = 3173882 | 25 (0.240) | coding (905/1245 nt) | ygjU | sodium:serine/threonine symporter |
TCTATTCCGCTGGGTGCCACCATCAATATGGCGGGCGCAGCAATCACCATTACCGTGTTGACGCTGGCT > REL606/3173848‑3173916 | tCTATTCCGCTGGGTGCCACCATCAATATggcggg < 1:19603867/35‑1 (MQ=255) tCTATTCCGCTGGGTGCCACCATCAATATggcggg < 1:15141527/35‑1 (MQ=255) tCTATTCCGCTGGGTGCCACCATCAATATggcggg > 1:5327103/1‑35 (MQ=255) tCTATTCCGCTGGGTGCCACCATCAATATggcggg < 1:16968758/35‑1 (MQ=255) tCTATTCCGCTGGGTGCCACCATCAATATggcggg > 1:1635427/1‑35 (MQ=255) tCTATTCCGCTGGGTGCCACCATCAATATggcggg > 1:15986254/1‑35 (MQ=255) cTATTCCGCTGGGTGCCACCATCAATATGGCGGGg < 1:12603607‑M2/35‑2 (MQ=255) tATTCCGCTGGGTGCCACCATCAATATGGCGGGgg < 1:17095838‑M2/35‑3 (MQ=255) aTTCCGCTGGGTGCCACCATCAATATGGCGGgcgc < 1:4969989/35‑1 (MQ=255) aTTCCGCTGGGTGCCACCATCAATATGGCGGgcgc < 1:6942514/35‑1 (MQ=255) aTTCCGCTGGGTGCCACCATCAATATGGCGGGggg < 1:19072227‑M2/35‑4 (MQ=255) aTTCCGCTGGGTGCCACCATCAATATGGCGGGggg < 1:17714398‑M2/35‑4 (MQ=255) aTTCCGCTGGGTGCCACCATCAATATGGCGGGggg < 1:16014695‑M2/35‑4 (MQ=255) ttCCGCTGGGTGCCACCATCAATATGGCGGGgggg < 1:16021206‑M2/35‑5 (MQ=255) ttCCGCTGGGTGCCACCATCAATATGGCGGGCgca < 1:2424951/35‑1 (MQ=255) tCCGCTGGGTGCCACCATCAATATGGCGGGggggg < 1:7592129‑M2/35‑6 (MQ=255) tCCGCTGGGTGCCACCATCAATATGGCGGGggggg < 1:19472337‑M2/35‑6 (MQ=255) tCCGCTGGGTGCCACCATCAATATGGCGGGCgcag < 1:369814/35‑1 (MQ=255) ccGCTGGGTGCCACCATCAATATGGCGGGgggggg < 1:17920451‑M2/35‑7 (MQ=255) ccGCTGGGTGCCACCATCAATATGGCGGGgggggg < 1:16569456‑M2/35‑7 (MQ=255) ccGCTGGGTGCCACCATCAATATGGCGGGgggggg < 1:14454741‑M2/35‑7 (MQ=255) ccGCTGGGTGCCACCATCAATATGGCGGGgggggg < 1:8015691‑M2/35‑7 (MQ=255) ccGCTGGGTGCCACCATCAATATGGCGGGgggggg < 1:13513223‑M2/35‑7 (MQ=255) ccGCTGGGTGCCACCATCAATATGGCGGGCgcagc < 1:8893370/35‑1 (MQ=255) cGCTGGGTGCCACCATCAATATGGCGGGggggggg < 1:666461‑M2/35‑8 (MQ=255) cGCTGGGTGCCACCATCAATATGGCGGGCgcagca < 1:12116/35‑1 (MQ=255) gCTGGGTGCCCCCATCAATATGGCGGGCGCAGCaa < 1:10082644/35‑1 (MQ=255) gCTGGGTGCCACCATCAATATGGCGGGgggggggg < 1:8732747‑M2/35‑9 (MQ=255) cggggTGCCACCATCAATATGGCGGGCGCAGCAAt < 1:6605878/33‑1 (MQ=255) cTGGGTGCCCCCATCAATATGGCGGGCGCAGCAAt < 1:5372281/35‑1 (MQ=255) cTGGGTGCCACCATCAATATGGCGGGggggggggg < 1:15797588‑M2/35‑10 (MQ=255) cTGGGTGCCACCATCAATATGGCGGGggggggggg < 1:3214526‑M2/35‑10 (MQ=255) cTGGGTGCCACCATCAATATGGCGGGggggggggg < 1:14161945‑M2/35‑10 (MQ=255) cTGGGTGCCACCATCAATATGGCGGGCGCAGCAAt < 1:1071302/35‑1 (MQ=255) cTGGGTGCCACCATCAATATGGCGGGCGCAGCAAt < 1:9279070/35‑1 (MQ=255) tGGGTGCCACCATCAATATGGCGGGgggggggggg < 1:19401678‑M2/35‑11 (MQ=255) tGGGTGCCACCATCAATATGGCGGGgggggggggg < 1:7594178‑M2/35‑11 (MQ=255) tGGGTGCCACCATCAATATGGCGGGgggggggggc < 1:14642204‑M2/35‑11 (MQ=255) tGGGTGCCACCATCAATATGGCGGGggggggggga < 1:9070020‑M2/35‑11 (MQ=255) tGGGTGCCACCATCAATATGGCGGGCGCAGCAATc < 1:366443/35‑1 (MQ=255) tGGGTGCCACCATCAATATGGCGGGCGCAGCAATc < 1:10479661/35‑1 (MQ=255) gggTGCCACCATCAATATGGCGGGCGCAGCAATCa < 1:11212754/35‑1 (MQ=255) gggTGCCACCATCAATATGGCGGGCGCAGCAATCa < 1:2147773/35‑1 (MQ=255) gggTGCCACCATCAATATGGCGGGCGCAGCAATCa < 1:1294170/35‑1 (MQ=255) ggTGCCACCATCAATATGGCGGGCGCAGCAATCAc < 1:12790229/35‑1 (MQ=255) gTGCCACCATCAATATGGCGGGCGCAGCAATCAcc < 1:16576959/35‑1 (MQ=255) gacaccaTCAATATGGCGGGCGCAGCAATCACAAt < 1:740320/33‑1 (MQ=38) cccccaTCAATATGGCGGGCGCAGCAATCAACAtt < 1:6533512/32‑1 (MQ=37) cccccaTCAATATGGAGGGCGCAGCATTCACCAtt < 1:19042679/32‑1 (MQ=25) aTCAATATGGCGGGCGCAGCAATCACCATTACCgt < 1:10717854/35‑1 (MQ=255) cAATATGGGGGGCGCAGCAATCACCATTACCgtgt < 1:1410819/35‑1 (MQ=255) aaTATGGCGGGCGCAGCAATCACCATTACCGTGtt < 1:3177831/35‑1 (MQ=255) aaTAGGGCGGGCGCAGCAATCACCATTACCGTGtt < 1:9268832/35‑1 (MQ=255) atatGGCGGGCGCAGCAATCACCATTACCGTGTTg < 1:4655919/35‑1 (MQ=255) tatGGCGGGCGCAGAAATCACCATTACCGTGTTGa < 1:14196561/35‑1 (MQ=255) tGGCGGGCGCAGCAATCACAATTACCGTGTTGACg < 1:9748194/35‑1 (MQ=255) ggggggcgCAGCATTCACCATTACCGTGTTGACgc < 1:12336591/32‑1 (MQ=37) ggcgggcgCAGCAATCACCATTACCGTGTTGACgc < 1:3178062/35‑1 (MQ=255) gcgggcgCAGCAATCACCATTACCGTGTTGACgct < 1:4928236/35‑1 (MQ=255) gcgggcgCAGCAATCACCATTACCGTGTTGACgct > 1:13810310/1‑35 (MQ=255) ggggcgCAGCAATCACCATTACAGTGTTGACgctg < 1:16387170/34‑1 (MQ=255) cgggcgCAGCATTCACCATTACCGTGTTGACgctg < 1:10295758/35‑1 (MQ=255) cgggcgCAGCATTCACCATTACCGTGTTGACgctg < 1:7401808/35‑1 (MQ=255) cgggcgCAGCAATCACCATTACCGTGTTGACgctg < 1:12867632/35‑1 (MQ=255) cgggcgCAGCAATCACCATTACCGTGTTGACgctg > 1:1421594/1‑35 (MQ=255) cgggcgCAGCAATCACCATTACCGTGTTGACgctg > 1:15731626/1‑35 (MQ=255) cgggcgCAGCAATCACCATTACCGTGTTGACgctg < 1:18377201/35‑1 (MQ=255) cgggcgCAGCAATCACCATTACCGTGTTGACgctg > 1:16822957/1‑35 (MQ=255) cgggcgCAGCAATCACCATTACCGTGTTGACgctg > 1:5737964/1‑35 (MQ=255) cgggcgCAACATTCACCATTACCGTGTTGACgctg < 1:6163754/35‑1 (MQ=37) gggcgCAGCATTCACCATTACCGTGTTGACgctgg < 1:4940574/35‑1 (MQ=255) gggcgCAGCAATCACCATTACCGTGTTGACgctgg < 1:1641404/35‑1 (MQ=255) gggcgCAGCAATCACCATTACCGTGTTGACgctgg > 1:19426266/1‑35 (MQ=255) gggcgCAGCAATCACCATTACCGTGTTGACgctgg < 1:8506461/35‑1 (MQ=255) gggcgCAGCAATCACCATTACCGTGTTGACgctgg > 1:2897532/1‑35 (MQ=255) gggcgCAGCAATCACCATTACCGTGTTGACgctgg < 1:10915228/35‑1 (MQ=255) gggcgCAGCAATCACCATCACCGTGTTGACgctgg > 1:6075211/1‑35 (MQ=255) gggagCAGCAATCACCATTACCGTGTTGACgctgg < 1:13845099/35‑1 (MQ=255) ggcgCAGCAATCACCATTACCGTGTTGACgctggc > 1:1237004/1‑35 (MQ=255) ggcgCAGCAATCACCATTACCGTGTTGACgctggc > 1:10809097/1‑35 (MQ=255) gcgcAGCATTCACCATTACCGTGTTGACgctggct < 1:16369957/35‑1 (MQ=255) gcgcAGCAATCACCATTACCGTGTTGACgctggct < 1:5571509/35‑1 (MQ=255) gcgcAGCAATCACCATTACCGTGTTGACgctggct > 1:7265636/1‑35 (MQ=255) | TCTATTCCGCTGGGTGCCACCATCAATATGGCGGGCGCAGCAATCACCATTACCGTGTTGACGCTGGCT > REL606/3173848‑3173916 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |