New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1723584 = | 50 (0.490) | 4 (0.050) | 3/36 | NT | 6.2% | intergenic (‑190/‑118) | ydhQ/valV | hypothetical protein/tRNA‑Val |
? | REL606 | = 2780594 | 110 (1.070) | intergenic (‑196/‑120) | cysJ/ygcM | sulfite reductase, alpha subunit, flavoprotein/6‑pyruvoyl tetrahydrobiopterin synthase (PTPS) |
Only 100 of 112 total aligned reads displayed.
TGAATAAAAATCGCCCTTGCAAATCAACAAAATATAGCCAATTTGCTTAAAAGCTCTGCAAACGGTCGA > REL606/1723550‑1723618 | tGAATAAAAATCGCCCTTGCAAATCAACAAAatat < 1:11071656/35‑1 (MQ=255) tGAATAAAAATCGCCCTTGCAAATCAACAAAatat > 1:19717050/1‑35 (MQ=255) tGAATAAAAATCGCCCTTGCAAATCAACAAAatat < 1:12872987/35‑1 (MQ=255) tGAATAAAAATCGCCCTTGCAAATCAACAAAatat > 1:8115145/1‑35 (MQ=255) tGAATAAAAATCGCCCTTGCAAATCAACAAAatat > 1:7988035/1‑35 (MQ=255) gAATAAAAATCGCCCTTGCAAATCAACAAAAtata > 1:6822760/1‑35 (MQ=255) gAATAAAAATCGCCCTTGCAAATCAACAAAAtata > 1:11009697/1‑35 (MQ=255) aaTAAAAATCGCCCTTGCAAATCAACAAAATATAg > 1:2566753/1‑35 (MQ=255) aaTAAAAATCGCCCTTGCAAATCAACAAAATATAg > 1:15027994/1‑35 (MQ=255) aaTAAAAATCGCCCTTGCAAATCAACAAAATATAg < 1:7016259/35‑1 (MQ=255) aaTAAAAATCGCCCTTGCAAATCAACAAAATATAg < 1:13334051/35‑1 (MQ=255) aaTAAAAATCGCCCTTGCAAATCAACAAAATATAg < 1:7594492/35‑1 (MQ=255) aaTAAAAATCGCCCTTGCAAATCAACAAAATATAg < 1:11872688/35‑1 (MQ=255) aaTAAAAATCGCCCTTGAAAATCAACAAAATATAg < 1:18030578/35‑1 (MQ=255) tAAAAATCGCCCTTGCAAATCAACAAAATATAGcc > 1:11317287/1‑35 (MQ=255) tAAAAATCGCCCTTGCAAATCAACAAAATATAGcc < 1:16711329/35‑1 (MQ=255) aaaaTCGCCCTTGCAAATCAACAAAATATAGCCaa > 1:14194591/1‑35 (MQ=255) aaaTCGCCCTTGCAAATCAACAAAATATAGCCAAt > 1:7190479/1‑35 (MQ=255) aaaTCGCCCTTGCAAATCAACAAAATATAGCCAAt > 1:9157039/1‑35 (MQ=255) naTCGCCCTTGCAAATCAACAAAATATAGCCAAtt > 1:16569081/2‑35 (MQ=255) aaTCGCCCTTGCAAATCAACAAAATATAGCCAAtt > 1:4424074/1‑35 (MQ=255) aTCGCCCTTGCAAATCAACAAAATATAGCCAAttt > 1:132593/1‑35 (MQ=255) aTCGCCCTTGCAAATCAACAAAATATAGCAAAttt < 1:13169875/35‑1 (MQ=255) tCGCCCTTGCAAATCAACAAAATATAGCCAATTTg > 1:1996479/1‑35 (MQ=255) cGCCCTTGCAAATCAACAAAATATAGCCAATTTGc > 1:19084479/1‑35 (MQ=255) gCCCTTGCAAATCAACAAAATATAGCCAATTTGCt > 1:553919/1‑35 (MQ=255) gCCCTTGCAAATCAACAAAATATAGCCAATTTGCt > 1:10377611/1‑35 (MQ=255) ccTTGCAAATCAACAAAATATAGCCAATTTGCTTa > 1:17960833/1‑35 (MQ=255) ccTTGCAAATCAACAAAATATAGCCAATTTGCTTa > 1:11492151/1‑35 (MQ=255) cTTGCAAATCAACAAAATATAGCCAATTTGCTTaa > 1:9359667/1‑35 (MQ=255) cTTGCAAATCAACAAAATATAGCCAATTTGCTTaa > 1:13101210/1‑35 (MQ=255) cTTGCAAATCAACAAAATATAGCCAATTTGCTTaa > 1:10458960/1‑35 (MQ=255) cTTGCAAATCAACAAAATATAGCCAATTTGCTTaa > 1:11288976/1‑35 (MQ=255) ttGCAAATCAACAAAATATATCCAATTTGCTTaaa > 1:17479632/1‑35 (MQ=255) ttGCAAATCAACAAAATATAGCCAATTTGCTTaaa > 1:12544419/1‑35 (MQ=255) tgaaaaaaaaaaaaattTAGCCAATTTGCTTaaaa > 1:2353982‑M1/18‑35 (MQ=255) cAAATCAACAAAATATAGCCAATTTGCTTAAAAGc > 1:17929949/1‑35 (MQ=255) cAAATCAACAAAATATAGCCAATTTGCTTAAAAGc > 1:7204877/1‑35 (MQ=255) aaaaaaaaaaaattTAGCCAATTTGCTTAAAAGct > 1:9666375‑M1/15‑35 (MQ=255) aaaTCAACAAAATATAGCCAATTTGCTTAAAAGct > 1:20573813/1‑35 (MQ=255) aaaTCAACAAAATATAGCCAATTTGCTTAAAAGct > 1:18009494/1‑35 (MQ=255) naTCAACAAAATATAGCCAATTTGCTTAAAAGctc > 1:12991542/2‑35 (MQ=255) aaTCAACAAAATATAGCCAATTTGCTTAAAAGctc > 1:11834957/1‑35 (MQ=255) aaTCAACAAAATATAGCCAATTTGCTTAAAAGctc > 1:1117741/1‑35 (MQ=255) aaTCAACAAAATATAGCCAATTTGCTTAAAAGctc > 1:9596930/1‑35 (MQ=255) aacaaaaaatttTAGCCAATTTGCTTAAAAGctct > 1:17696788‑M1/13‑35 (MQ=255) aaaaaaaaaattTAGCCAATTTGCTTAAAAGctct > 1:280‑M1/13‑35 (MQ=255) aTCAACAAAATATAGCCAATTTGCTTAAAAGctct > 1:11204078/1‑35 (MQ=255) aTCAACAAAATATAGCAAATTTGCTTAAAAGctct < 1:4899374/35‑1 (MQ=255) tCAACAAAATATAGCCAATTTGCTTAAAAGCTCTg > 1:4661137/1‑35 (MQ=255) tCAACAAAATATAGCCAATTTGCTTAAAAGCTCTg > 1:6250948/1‑35 (MQ=255) aaaaaaaaattTAGCCAATTTGCTTAAAAGCTCTg > 1:1014444‑M1/12‑35 (MQ=255) caacaaAATATAGCCAATTTGCTTAAAAGCTCTGc > 1:14224330/1‑35 (MQ=255) caacaaAATATAGCCAATTTGCTTAAAAGCTCTGc > 1:15188852/1‑35 (MQ=255) caacaaAATATAGCCAATTTGCTTAAAAGCTCTGc > 1:19812491/1‑35 (MQ=255) caacaaAATATAGCCAATTTGCTTAAAAGCTCTGc > 1:19010575/1‑35 (MQ=255) aacaaAATATAGCCAATTTGCTTAAAAGCTCTGCa > 1:1061742/1‑35 (MQ=255) aacaaAATATAGCCAATTTGCTTAAAAGCTCTGCa > 1:5013030/1‑35 (MQ=255) acaaAATATAGCCAATTTGCTTAAAAGCTCTGCaa > 1:16663112/1‑35 (MQ=255) aaaatTATAGCCAATTTGCTTAAAAGCTCTGCaaa < 1:6832383/34‑1 (MQ=255) aaatttTAGCCAATTTGCTTAAAAGCTCTGCAAAc > 1:19696772‑M1/7‑35 (MQ=255) aaatTATAGCCAATTTGCTTAAAAGCTCTGCAAAc < 1:2746589/35‑1 (MQ=255) aaaattTAGCCAATTTGCTTAAAAGCTCTGCAAAc > 1:5382297‑M1/7‑35 (MQ=255) aaaaTATAGCCAATTTGCTTAAAAGCTCTGCAAAc > 1:5764796/1‑35 (MQ=255) aaaaTATAGCCAATTTGCTTAAAAGCTCTGCAAAc > 1:5813114/1‑35 (MQ=255) aaaaTATAGCCAATTTGCTTAAAAGCTCTGCAAAc > 1:14926573/1‑35 (MQ=255) aaaaTATAGCCAATTTGCTTAAAAGCTCTGCAAAc > 1:18862792/1‑35 (MQ=255) aaattTAGCCAATTTGCTTAAAAGCTCTGCAAACg > 1:8424190‑M1/6‑35 (MQ=255) aaaTATAGCCAATTTGCTTAAAAGCTCTGCAAACg > 1:11215518/1‑35 (MQ=255) aaTATAGCCAATTTGCTTAAAAGCTCTGCAAACgg > 1:11097133/1‑35 (MQ=255) aaTATAGCCAATTTGCTTAAAAGCTCTGCAAACgg > 1:3748004/1‑35 (MQ=255) tttTAGCCAATTTGCTTAAAAGCTCTGCAAACGGt > 1:17105628‑M1/4‑35 (MQ=255) attTAGCCAATTTGCTTAAAAGCTCTGCAAACGGt > 1:16297765‑M1/4‑35 (MQ=255) atatAGCCAATTTGCTTAAAAGCTCTGCAAACgga > 1:3810306/1‑34 (MQ=255) atatAGCCAATTTGCTTAAAAGCTCTGCAAACGGt < 1:14618566/35‑1 (MQ=255) atatAGCCAATTTGCTTAAAAGCTCTGCAAACGGt > 1:19165912/1‑35 (MQ=255) atatAGCCAATTTGCTTAAAAGCTCTGCAAACGGt > 1:14190419/1‑35 (MQ=255) atatAGCCAATTTGCTTAAAAGCTCTGCAAACGGt > 1:3871723/1‑35 (MQ=255) atatAGCCAATTTGCTTAAAAGCTCTGCAAACGGt > 1:11623558/1‑35 (MQ=255) ttTAGCCAATTTGCTTAAAAGCTCTGCAAACGGTc > 1:6993245‑M1/3‑35 (MQ=255) ttTAGCCAATTTGCTTAAAAGCTCTGCAAACGGTc > 1:5750008‑M1/3‑35 (MQ=255) ttTAGCCAATTTGCTTAAAAGCTCTGCAAACGGTc > 1:5578276‑M1/3‑35 (MQ=255) ttTAGCCAATTTGCTTAAAAGCTCTGCAAACGGTc > 1:15692265‑M1/3‑35 (MQ=255) tataGCCAATTTGCTTACAAGCTCTGCAAACGGTc > 1:17968091/1‑35 (MQ=255) tataGCCAATTTGCTTAAAAGCTCTGCAAACGGTc > 1:5144741/1‑35 (MQ=255) tTAGCCAATTTGCTTAAAAGCTCTGCAAACGGTCg > 1:1039772‑M1/2‑35 (MQ=255) tTAGCCAATTTGCTTAAAAGCTCTGCAAACGGTCg > 1:15562145‑M1/2‑35 (MQ=255) tTAGCCAATTTGCTTAAAAGCTCTGCAAACGGTCg > 1:1519610‑M1/2‑35 (MQ=255) ataGCCAATTTGCTTAAAAGCTCTGCAAACGGTCg > 1:5082811/1‑35 (MQ=255) ataGCCAATTTGCTTAAAAGCTCTGCAAACGGTCg > 1:13233778/1‑35 (MQ=255) ataGCCAATTTGCTTAAAAGCTCTGCAAACGGTCg > 1:2853899/1‑35 (MQ=255) ataGCCAATTTGCTTAAAAGCTCTGCAAACGGTCg > 1:5372301/1‑35 (MQ=255) ataGCCAATTTGCTTAAAAGCTCTGCAAACGGTCg > 1:1475561/1‑35 (MQ=255) taGCCAATTTGCTTAAAAGCTCTGCAAACGGTCGa > 1:19373028/1‑35 (MQ=255) taGCCAATTTGCTTAAAAGCTCTGCAAACGGTCGa > 1:14566858/1‑35 (MQ=255) taGCCAATTTGCTTAAAAGCTCTGCAAACGGTCGa < 1:13475426/35‑1 (MQ=255) taGCCAATTTGCTTAAAAGCTCTGCAAACGGTCGa > 1:6379910/1‑35 (MQ=255) taGCCAATTTGCTTAAAAGCTCTGCAAACGGTCGa > 1:5216891/1‑35 (MQ=255) taGCCAATTTGCTTAAAAGCTCTGCAAACGGTCGa > 1:2531927/1‑35 (MQ=255) taGCCAATTTGCTTAAAAGCTCTGCAAACGGTCGa > 1:20194159/1‑35 (MQ=255) | TGAATAAAAATCGCCCTTGCAAATCAACAAAATATAGCCAATTTGCTTAAAAGCTCTGCAAACGGTCGA > REL606/1723550‑1723618 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |