New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1711816 = | 78 (0.760) | 21 (0.250) | 4/40 | NT | 22.6% | coding (188/816 nt) | ydhO | predicted lipoprotein |
? | REL606 | = 2450890 | 79 (0.920) | intergenic (‑182/+27) | yfeA/alaX | predicted diguanylate cyclase/tRNA‑Ala |
AGAAGCGGTTTTGCTTTTGGTCGTACTTTTACTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1711853‑1711816 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGTA < REL606/2450890‑2450857 AGAAGCGGTTTTGCTTTTGGTCGTACTTTTACTGG < 1:2113937/35‑1 AGAAGCGGTTTTGCTTTTGGTCGTACTTTTACTGG < 1:5787564/35‑1 GAAGCGGTTTTGCTTTTGGTCGTACTTTTACTGGC < 1:12058070/35‑1 GAAGCGGTTTTGCTTTTGGTCGTACTTTTACTGGC < 1:1393353/35‑1 AAGCGGTTTTGCTTTTGGTCGTACTTTTGCTGGCG < 1:5347558/35‑1 AAGCGGTTTTGCTTTTGGTCGTACTTTTACTGGgg > 1:15629417/1‑33 AAGCGGTTTTGCTTTTGGTCGTACTTTTACTGGCG > 1:19738762/1‑35 AAGCGGTTTTGCTTTTGGTCGTACTTTTACTGGCG < 1:7239570/35‑1 AAGCGGTTTTGCTTTTGGTCGTACTTTTACTGGCG < 1:11504457/35‑1 AGCGGTTTTGCTTTTGGTCGTACTTTTACTGGCGG < 1:5833462/35‑1 CGGTTTTGCTTTTGGTCGTACTTTTACTGGCGGGG > 1:711098/1‑35 CGGTTTTGCTTTTGGTCGTACTCTTACTGGCGGGG > 1:3466270/1‑35 GGTTTTGCTTTTGGTCGTACTTTTACTGGCGGGGt > 1:1467716/1‑34 GGTTTTGCTTTTGGTCGTACTTTTACTGGCGGGGt > 1:15444038/1‑34 GGTTTTGCTTTTGGTCGTACTTTTACTGGCGGGGG > 1:3808218/1‑35 GGTTTTGCTTTTGGTCGTACTTTTACTGGCGGGGG > 1:13388816/1‑35 GGTTTTGCTTTTGGTCGTACTTTTACTGGCGGGGG > 1:15682730/1‑35 GGTTTTGCTTTTGGTCGTACTTTTACTGGCGGGGG > 1:19009382/1‑35 GGTTTTGCTTTTGGTCGTACTTTTACTGGCGGGGG > 1:6335699/1‑35 GTTTTGCTTTTGGTCGTACTTTTACTGGCGGGGtt > 1:4896796/1‑33 GTTTTGCTTTTGGTCGTACTTTTACTGGCGGGGtt > 1:14439492/1‑33 GTTTTGCTTTTGGTCGTACTTTTACTGGCGGGGtg > 1:6628391/1‑33 GTTTTGCTTTTGGTCGTACTTTTACTGGCGGGGGT > 1:14533073/1‑35 TTTTGCTTTTGGTCGTACTTTTACTGGCGGGGtgt > 1:2284617/1‑32 TTTTGCTTTTGGTCGTACTTTTACTGGCGGGGTTT > 1:11408457/1‑35 TTTTGCTTTTGGTCGTACTTTTACTGGCGGGGGTT > 1:9200977/1‑35 TTTGCTTTTGGTCGTACTTTTACTGGCGGGGTTTT > 1:9340385/1‑35 TTTGCTTTTGGTCGTACTTTTACTGGCGGGGTTTT > 1:10674026/1‑35 TTTGCTTTTGGTCGTACTTTTACTGGCGGGGGTTT > 1:695776/1‑35 TTTGCTTTTGGTCGTACTTTTACTGGCGGGGGTTT > 1:8098592/1‑35 TTGCTTTTGGTCGTACTTTTACTGGCGGGGGTTTT > 1:19139342/1‑35 GCTTTTGGTCGTACTTTTACTGGCGGGGTTTTTTT > 1:8998147/1‑35 GCTTTTGGTCGTACTTTTACTGGCGGGGGTTTTTT > 1:2061880/1‑35 GCTTTTGGTCGTACTTTTACTGGCGGGGGTTTTTT > 1:12825964/1‑35 GCTTTTGGTCGTACTTTTACTGGCGGGGGGTTTTT > 1:845463/1‑35 CTTTTGGTCGTACTTTTACTGGCGGGGTTTTTTTt > 1:17560558/1‑34 CTTTTGGTCGTACTTTTACTGGCGGGGGTTTTTct > 1:18019015/1‑33 CTTTTGGTCGTACTTTTACTGGCGGGGGTTTTTTt > 1:17592448/1‑34 CTTTTGGTCGTACTTTTACTGGCGGGGGTTTTTTt > 1:11446062/1‑34 CTTTTGGTCGTACTTTTACTGGCGGGGGTTTTTTG > 1:3610100/1‑35 TTTTGGTCGTACTTTTACTGGCGGGGGTTTTTTtt > 1:19329413/1‑33 TTTTGGTCGTACTTTTACTGGCGGGGGTTTTTTtt > 1:10109490/1‑33 TTTTGGTCGTACTTTTACTGGCGGGGGTTTTTTtt > 1:11946546/1‑33 TTTTGGTCGTACTTTTACTGGCGGGGGTTTTTTtc > 1:2390807/1‑33 TTTGGTCGTACTTTTACTGGCGGGGGTTTTTTttt > 1:15917235/1‑32 TTTGGTCGTACTTTTACTGGCGGGGGTTTTTTttg > 1:2713727/1‑32 TTTGGTCGTACTTTTACTGGCGGGGGGTTTTTGTt > 1:18892336/1‑34 GCGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTT < 1:10420586/35‑1 GCGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTT < 1:898788/35‑1 GCGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTT < 1:6901862/35‑1 GCGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTT > 1:12247156/1‑35 GCGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTT < 1:12485322/35‑1 GCGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTT < 1:1826543/35‑1 GCGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTT < 1:17651131/35‑1 GCGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTT < 1:18078704/35‑1 GCGGGGGTTTTTTGTCTCTGCTTTTTGCAGCTTTT < 1:11967168/35‑1 CGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTG < 1:18761149/35‑1 CGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTG > 1:14400591/1‑35 CGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTG < 1:10861803/35‑1 CGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTG < 1:14094366/35‑1 CGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTG < 1:13148157/35‑1 CGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTG < 1:19781989/35‑1 CGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTG > 1:7806583/1‑35 CGGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTG > 1:11292616/1‑35 GGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGT < 1:7889722/35‑1 GGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGT < 1:13156310/35‑1 GGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGT < 1:14192284/35‑1 GGGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGT > 1:15887574/1‑35 GGGGATTTTTTGTCTCTGCTTTTTGCCGCTTTTGT > 1:18711594/1‑35 GGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGTA > 1:6971690/1‑35 GGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGTA > 1:11448146/1‑35 GGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGTA > 1:11859613/1‑35 GGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGTA > 1:19617614/1‑35 GGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGTA < 1:1085841/35‑1 GGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGTA > 1:16089850/1‑35 GGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGTA > 1:9104615/1‑35 GGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGTA > 1:10114827/1‑35 AGAAGCGGTTTTGCTTTTGGTCGTACTTTTACTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1711853‑1711816 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggGGGTTTTTTGTCTCTGCTTTTTGCCGCTTTTGTA < REL606/2450890‑2450857 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |