New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2840701 = | 74 (0.720) | 27 (0.270) | 8/46 | NT | 24.4% | coding (1097/1098 nt) | mltA | membrane‑bound lytic murein transglycosylase A |
? | REL606 | 3891539 = | 96 (0.970) | intergenic (‑85/‑138) | yieN/kup | fused predicted transcriptional regulator: sigma54 activator protein/conserved protein/potassium transporter |
Only 100 of 179 total aligned reads displayed.
ACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGC > REL606/3891505‑3891573 | aCGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgg > 1:3287286/1‑35 (MQ=255) cGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAggg > 1:2172494/1‑35 (MQ=255) gccccgggcgcaggtaacgtctttagcggctgggg > 1:15871758‑M2/33‑35 (MQ=255) gccccgggcgcaggtaacgtctttagcggctgggg > 1:6073460‑M2/33‑35 (MQ=255) gccccgggcgcaggtaacgtctttagcggctgggg > 1:16426131‑M2/33‑35 (MQ=255) gTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggg > 1:6668508/1‑35 (MQ=255) tttCTTGCTGGTGGCTAAAATAGTCTCAAAggggg < 1:623818/35‑1 (MQ=255) tttCTTGCTGGTGGCTAAAATAGTCTCAAAggggg < 1:2048058/35‑1 (MQ=255) ttCTTGCTGGTGGCTAAAATAGTCTCAAAgggggg > 1:16194760/1‑35 (MQ=255) ttCTTGCTGGTGGCTAAAATAGTCTCAAAgggggg < 1:14595369/35‑1 (MQ=255) tCTTGCTGGTGGCTAAAATAGTCTCAAAggggggg < 1:16038214/35‑1 (MQ=255) tCTTGCTGGTGGCTAAAATAGTCTCAAAggggggg > 1:15589538/1‑35 (MQ=255) ccgggcgcaggtaacgtctttagcggctggggggg > 1:20374650‑M2/30‑35 (MQ=255) cTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGt > 1:14371466/1‑35 (MQ=255) tGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGTAt < 1:9553072/35‑1 (MQ=255) ggcgcaggtaacgtctttagcggctgggggggcaa > 1:13089583‑M2/27‑32 (MQ=255) ggcgcaggtaacgtctttagcggctgGTGGGGTAt > 1:6679040‑M2/27‑35 (MQ=255) gcgcaggtaacgtctttagcggctgGGGGGGTAtt > 1:7687687‑M2/26‑35 (MQ=255) cgcaggtaacgtctttagcggctgGGGGGGTGttt > 1:3875650‑M2/25‑35 (MQ=255) cgcaggtaacgtctttagcggctgGGGGGGTAttt > 1:5918085‑M2/25‑35 (MQ=255) cgcaggtaacgtctttagcggctgGGGGGGTAttt > 1:10272572‑M2/25‑35 (MQ=255) cTGGTGGCTAAAATAGTCTCAAAGGGGGGGTAttt > 1:7220458/1‑35 (MQ=255) cTGGTGGCTAAAATAGTCTCAAAGGGGGGGTAttt < 1:13422938/35‑1 (MQ=255) tggtggCTAAAATAGTCTCAAAGGGGGGGTAtttt > 1:16892818/1‑35 (MQ=255) tggtggCTAAAATAGTCTCAAAGGGGGGGTAtttt > 1:3615280/1‑35 (MQ=255) tggtggCTAAAATAGTCTCAAAGGGGGGGTAtttt < 1:7208879/35‑1 (MQ=255) gcaggtaacgtctttagcggctgGGGTGGTAtttt > 1:8748661‑M2/24‑35 (MQ=255) gcaggtaacgtctttagcggctgGGGGGGTttttc > 1:17847163‑M2/24‑34 (MQ=255) gcaggtaacgtctttagcggctgGGGGGGTAtttt > 1:10167706‑M2/24‑35 (MQ=255) ggtggCTAAAATAGTCTCAAAGGGGGGGTAttttt < 1:20078185/35‑1 (MQ=255) ggtggCTAAAATAGTCTCAAAGGGGGGGTAttttt < 1:17118494/35‑1 (MQ=255) ggtggCTAAAATAGTCTCAAAGGGGGGGTAttttt < 1:11722019/35‑1 (MQ=255) caggtaacgtctttagcggctgGGGGGGTAttttt > 1:12473859‑M2/23‑35 (MQ=255) gtggCTAAAATAGTCTCAAAGGGGGGTTATTTTTc > 1:12199533/1‑35 (MQ=255) gtggCTAAAATAGTCTCAAAGGGGGGTTATTTTTc > 1:3360829/1‑35 (MQ=255) gtggCTAAAATAGTCTCAAAGGGGGGGTATTTTTc < 1:1980148/35‑1 (MQ=255) gtggCTAAAATAGTCTCAAAGGGGGGGTATTTTTc < 1:18992859/35‑1 (MQ=255) gtggCTAAAATAGTCTCAAAGGGGGGGGATTTTTc > 1:9736956/1‑35 (MQ=255) tggCTAAAATAGTCTCAAAGGGGGGGTATTTTTCt < 1:17431063/35‑1 (MQ=255) tggCTAAAATAGTCTCAAAGGGGGGGTATTTTTCt > 1:18081877/1‑35 (MQ=255) tggCTAAAATAGTCTCAAAGGGGGGGTATTTTTCt > 1:10846160/1‑35 (MQ=255) ggtaacgtctttagcggctgGGGGGGtattttttt > 1:15846926‑M2/21‑33 (MQ=255) ggtaacgtctttagcggctgGGGGGGtattttttt > 1:932120‑M2/21‑33 (MQ=255) ggCTAAAATAGTCTCAAAGGGGGGGTATTTTTCtt > 1:12972883/1‑35 (MQ=255) ggCTAAAATAGTCTCAAAGGGGGGGTATTTTTCtt > 1:2643385/1‑35 (MQ=255) ggCTAAAATAGTCTCAAAGGGGGGGTATTTTTCtt < 1:18476711/35‑1 (MQ=255) ggCTAAAATAGTCTCAAAGGGGGGGTATTTTTCtt < 1:15224230/35‑1 (MQ=255) ggCTAAAATAGTCTCAAAGGGGGGGTATTTTTCtt > 1:4524710/1‑35 (MQ=255) taacgtctttagcggctgGGGGGGTATTTTTTttt > 1:8422934‑M2/19‑35 (MQ=255) gCTAAAATAGTCTCAAAGGGGGGGTATTTTTCttt > 1:19631854/1‑35 (MQ=255) gCTAAAATAGTCTCAAAGGGGGGGTATTTTTCttt < 1:13706545/35‑1 (MQ=255) cTAAAATAGTCTCAAAGGGGGGGTATTTTTCTTTg < 1:38553/35‑1 (MQ=255) cTAAAATAGTCTCAAAGGGGGGGTATTTTTCTTTg < 1:1104366/35‑1 (MQ=255) cTAAAATAGTCTCAAAGGGGGGGTATTTTTATTTg < 1:7851790/35‑1 (MQ=255) tAAAATAGTCTCAAAGGGGGGGTATTTTTCTTTGa > 1:20003135/1‑35 (MQ=255) tAAAATAGTCTCAAAGGGGGGGTATTTTTCTTTGa > 1:3170712/1‑35 (MQ=255) tAAAATAGTCTCAAAGGGGGGGTATTTTTCTTTGa < 1:20552509/35‑1 (MQ=255) aaaaTAGTCTCAAAGGGGGGGTATTTTTCTTTGAg < 1:18351811/35‑1 (MQ=255) aaaaTAGTCTCAAAGGGGGGGTATTTTTCTTTGAg < 1:18571803/35‑1 (MQ=255) aaaTAGTCTCAAAGGGGGGGTATTTTTCTTTGAGc > 1:7119115/1‑35 (MQ=255) aaaTAGTCTCAAAGGGGGGGTATTTTTCTTTGAGc < 1:11292194/35‑1 (MQ=255) aaaTAGTCTCAAAGGGGGGGTATTTTTCTTTGAGc > 1:6140886/1‑35 (MQ=255) aTAGTCTCAAAGGGTGGGTATTTTTCTTTTAGCCa > 1:7227590/1‑35 (MQ=38) aTAGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCa > 1:18240102/1‑35 (MQ=255) tAGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAg < 1:11657340/35‑1 (MQ=255) tAGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAg > 1:12521991/1‑35 (MQ=255) tAGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAg < 1:14902416/35‑1 (MQ=255) tAGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAg < 1:10436239/35‑1 (MQ=255) aGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAgg > 1:8898917/1‑35 (MQ=255) aGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAgg > 1:6320372/1‑35 (MQ=255) aGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAgg < 1:20133810/35‑1 (MQ=255) aGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAgg > 1:14572796/1‑35 (MQ=255) aGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAgg > 1:17978350/1‑35 (MQ=255) gTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGt > 1:13592812/1‑35 (MQ=255) tctcAAAGGGGGGGTATTTTTCTTTGAGCCAGGtt > 1:16716068/1‑35 (MQ=255) tctcAAAGGGGGGGTATTTTTCTTTGAGCCAGGtt < 1:1903831/35‑1 (MQ=255) ctcAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTa > 1:9056905/1‑35 (MQ=255) ctcAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTa < 1:12055552/35‑1 (MQ=255) tcAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTaa > 1:10053378/1‑35 (MQ=255) tcAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTaa < 1:4020989/35‑1 (MQ=255) cAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAAt < 1:9580806/35‑1 (MQ=255) cAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAAt < 1:20234422/35‑1 (MQ=255) cAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAAt < 1:10098294/35‑1 (MQ=255) cAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAAt < 1:3704702/35‑1 (MQ=255) cAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAAt > 1:2490246/1‑35 (MQ=255) cAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAAt < 1:8007855/35‑1 (MQ=255) aaaGGGGGGGTATTTTTCTTTGAGCCAGGTTAAtg > 1:15784735/1‑35 (MQ=255) aaaGGGGGGGTATTTTTCTTTGAGCCAGGTTAAtg < 1:16491506/35‑1 (MQ=255) aaaGGGGGGGTATTTTTCTTTGAGCCAGGTTAAtg > 1:18830421/1‑35 (MQ=255) aaaGGGGGGGTATTTTTCTTTGAGCCAGGTTAAtg > 1:6783471/1‑35 (MQ=255) aaaGGGGGGGTATTTTTCTTTGAGCAAGGTTAAtg < 1:19445044/35‑1 (MQ=255) aaGGGGGGGTATTTTTCTTTGAGCCAGGTTAAtgt > 1:16689649/1‑35 (MQ=255) aaGGGGGGGTATTTTTCTTTGAGCCAGGTTAAtgt < 1:2062707/35‑1 (MQ=255) aaGGGGGCGTATTTTTCTTTGAGCCAGGTTAAtgt > 1:141373/1‑35 (MQ=255) gggggggGATTTTTCTTTGAGCCAGGTTAATGCgg > 1:1680050/1‑35 (MQ=37) gGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTgg > 1:7306471‑M2/2‑35 (MQ=255) gGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTgg > 1:1269890‑M2/2‑35 (MQ=255) gGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTgg < 1:10862690‑M2/34‑1 (MQ=255) gGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTgg > 1:20212054‑M2/2‑35 (MQ=255) ggggggTATTTTTCTTTGAGCCAGGTTAATGTGGc < 1:8497493/35‑1 (MQ=255) | ACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGC > REL606/3891505‑3891573 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |