New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3265224 = | 32 (0.310) | 6 (0.070) | 3/38 | NT | 9.0% | coding (1028/1434 nt) | dacB | D‑alanyl‑D‑alanine carboxypeptidase |
? | REL606 | = 3603631 | 96 (1.180) | coding (778/1014 nt) | yhjD | conserved inner membrane protein |
CATCGGCAATAATGGTGTTTCCAATATCGACACCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3265262‑3265224 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcttTTTTGCGCGGACGGTGGCGCGGCAACCGCCAGAA < REL606/3603631‑3603598 CATCGGCAATAATGGTGTTTCCAATATCGACACCG > 1:10978482/1‑35 CATCGGCAATAATGGTGTTTCCAATATCGACACCG > 1:2705258/1‑35 CATCGGCAATAATGGTGTTTCCAATATCGACACCG < 1:2683173/35‑1 CATCGGCAATAATGGTGTTTCCAATATCGACACCG > 1:17649620/1‑35 CATCGGCAATAATGGTGTTTCCAATATCGACACCG < 1:805633/35‑1 CATCGGCAATAATGGTGTTTCCAATATCGACACCG < 1:13228075/35‑1 CATCGGCAATAATGGTGTTTCCAATATCGACACCG > 1:4202118/1‑35 CATCGGCAATAATGGTGTTTCCAATATCGACACCG > 1:13603953/1‑35 CATCGGCAATAATGGTGTTTCCAATATCGACACCG < 1:5484177/35‑1 CATCGGCAATAATGGTGTTTCCAATATCGACACCG < 1:16013952/35‑1 ATCGGCAATAATGGTGTTTCCAATATCGACACCGG < 1:4176393/35‑1 ATCGGCAATAATGGTGTTTCCAATATCGACACCGG < 1:202261/35‑1 gCGGCAATAATGGTTTTTCCAATATCGACACCGGC < 1:1866411/34‑1 TCGGCAATAATGGTGTTTCCAATATCGACACCGGC < 1:17229021/35‑1 cgtCAATAATGGTGTTTCCAATATCGACACCGGCT < 1:3047043/32‑1 CGGCAATAATGGTGTTTCCAATATCGACACCGGCT < 1:3809004/35‑1 CGGCAATAATGGTGTTTCCAATATCGACACCGGCT < 1:2269262/35‑1 CGGCAATAATGGTGTTTCCAATATCGACACCGGCT < 1:2579806/35‑1 CGGCAATAATGGTGTTTCCAATATCGACACCGGCT > 1:3189648/1‑35 CGGCAATAATGGTGTTTCCAATATCGACACCGGCT > 1:4091457/1‑35 CGGCAATAATGGTGTTTCCAATATCGACACCGGCT > 1:4457079/1‑35 CGGCAATAATGGTGTTTCCAATATCGACACCGGCT > 1:13824652/1‑35 CGGCAATAATGGTGTTTCCAATATCGACACCGGCT > 1:5879361/1‑35 CGGCAATAATGGTGTTTCCAATATCGACACCGGCT > 1:6092321/1‑35 CGGCAATAATGGTGTTTCCAATATCGACACCGGCT < 1:12164049/35‑1 GGCAATAATGGTGTTTCCAATATCGACACCGGCTT > 1:8366555/1‑35 GGCAATAATGGTGTTTCCAATATCGACACCGGCTT < 1:8708752/35‑1 GGCAATAATGGTGTTTCCAATATCGACACCGGCTT < 1:9058543/35‑1 GGCAATAATGGTGTTTCCAATATCGACACCGGCTT > 1:9672832/1‑35 GGCAATAATGGTGTTTCCAATATCGACACCGGCTT < 1:210777/35‑1 GGCAATAATGGTGTTTCCAATATCGACACCGGCTT > 1:10669520/1‑35 GGCAATAATGGTGTTTCCAATATCGACACCGGCTT > 1:17671002/1‑35 GGCAATAATGGTGTTTCCAATATCGACACCGGCTT < 1:12610426/35‑1 GGCAATAATGGTGTTTCCAATATCGACAACGGCTT < 1:7275202/35‑1 GGCAATAACGGTGTTTCCAATATCGACACCGGCTT < 1:1145561/35‑1 GCAATAATTGTGTTTCCAATATCGACACCGGCTTT > 1:4903020/1‑35 GCAATAATGGTGTTTCCAATATCGACACCGGCTTT > 1:6933148/1‑35 GCAATAATGGTGTTTCCAATATCGACACCGGCTTT > 1:5477107/1‑35 AATAATGGTGTTTCCAATATCGACACCGGCTTaga > 1:13594444/1‑32 AATAATGGTGTTTCCAATATCGACACCGGCTTTTT > 1:4955848/1‑35 ATAATGGTGTTTCCAATATCGACACCGGCTTTctc > 1:14533975/1‑32 ATAATGGTGTTTCCAATATCGACACCGGCTTTTTT > 1:17684407/1‑35 ATAATGGTGTTTCCAATATCGACACCGGCTTTTTT > 1:7095330/1‑35 TAATGGTGTTTCCAATATCGACACCGGCTTTTTgt > 1:13024536/1‑33 AATGGTGTTTCCAATATCGACACCGGCTTTTTTGt > 1:7882598/1‑34 AATGGTGTTTCCAATATCGACACCGGCTTTTTTGt > 1:7740324/1‑34 ATGGTGTTTCCAATATCGACACCGGCTTTTTTGCG > 1:16740330/1‑35 TGGTGTTTCCAATATCGACACCGGCTTTTTTGGGC > 1:4220874/1‑35 TGGTGTTTCCAATATCGACACCGGCTTTTTTGCGC > 1:9190498/1‑35 GGTGTTTCCAATATCGACACCGGCTTTTTTGGGCG > 1:720638/1‑35 GGTGTTTCCAATATCGACACCGGCTTTTTTGCGCG > 1:4595640/1‑35 TGTTTCCAATATCGACACCGGCTTTTTTGCGCacg > 1:10545634/1‑32 GGCTTTTTTGCGCGGACGGTGGCGCGGCAAACGCC > 1:4416670/1‑35 GCTTTTTTGCGCGGACGGTGGCGCGGCAACCGCCA > 1:8090311/1‑35 TTTTTTGCGCGCACGGTGGCGCGGCAACCGCCAGA > 1:1373533/1‑35 TTTTTGCGCGGACGGTGGCGCGGCAACCGCCCGAA > 1:13517834/1‑35 TTTTTGCGCGGACGGTGGCGCGGCAACCGCCAGAA > 1:8684602/1‑35 CATCGGCAATAATGGTGTTTCCAATATCGACACCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3265262‑3265224 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcttTTTTGCGCGGACGGTGGCGCGGCAACCGCCAGAA < REL606/3603631‑3603598 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |