New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 449635 = | 24 (0.230) | 5 (0.070) | 3/34 | NT | 11.1% | coding (1050/1551 nt) | ylaB | conserved inner membrane protein |
? | REL606 | = 3144237 | 63 (0.870) | coding (314/1746 nt) | dnaG | DNA primase |
Only 100 of 138 total aligned reads displayed.
AATCTTGAAGTGCCATTTGAAGCAGGCAGCGGCCCCAGCCAGATCGAGCGCCATCAGAGGCAAACGCTT > REL606/3144203‑3144271 | aaTCTTGAAGTGCCATTTGAAGCAGGCAGCTGccc > 1:17618711/1‑35 (MQ=255) aaTCTTGAAGTGCCATTTGAAGCAGGCAGCGGccc > 1:5441445/1‑35 (MQ=255) aaTCTTGAAGTGCCATTTGAAGCAGGCAGCGGccc < 1:16391621/35‑1 (MQ=255) tattgaAGTGCCATTTGAAGCAGGCAGCGGCCCca > 1:19549700‑M2/3‑33 (MQ=255) tCTTGAAGTGCCATTTGAAGCAGGCAGCGGCCCca > 1:18721836‑M2/1‑33 (MQ=255) tCTTGAAGTGCCATTTGAAGCAGGCAGCGGCCCca > 1:11458835‑M2/1‑33 (MQ=255) cTTGAAGTGCCATTTGAAGCAGGCAGCGGCCCcag < 1:13429530‑M2/35‑4 (MQ=255) cTTGAAGTGCCATTTGAAGCAGGCAGCGGCCCcag > 1:6046492‑M2/1‑32 (MQ=255) ttGAAGTGCCATTTGAAGCAGGCAGCGGCCCcagc > 1:20518156‑M2/1‑31 (MQ=255) gAAGTGCCATTTGACGCAGGCAGCGGCCccaccca > 1:10249430/1‑35 (MQ=37) gAAGTGCCATTTGAAGCAGGCAGCGGCCCcagcca < 1:8017071‑M2/35‑7 (MQ=255) aaGTGCCATTTGAAGCAGGCAGCGGCCCcagccag < 1:11627382‑M2/35‑8 (MQ=255) aaGTGCCATTTGAAGCAGGCAGCGGCCCcagccag < 1:7795776‑M2/35‑8 (MQ=255) aaGTGCCATTTGAAGCAGGCAGCGGCCCcagccag > 1:14692364‑M2/1‑28 (MQ=255) aaGTGCCATTTGAAGCAGGCAGCGGCCCcagccag < 1:8251241‑M2/35‑8 (MQ=255) aGTGCCATTTGAAGCAGGCAGCGTCCCCAGCCAGa > 1:4593118/1‑35 (MQ=255) aGTGCCATTTGAAGCAGGCAGCGGGCCCAGCCAGa > 1:1725656/1‑35 (MQ=255) aGTGCCATTTGAAGCAGGCAGCGGCCCCAGCCAGa > 1:3580109/1‑35 (MQ=255) aGTGCCATTTGAAGCAGGCAGCGGCCCCAGCCAGa > 1:15837079/1‑35 (MQ=255) aGTGCCATTTGAAGCAGGCAGCGGCCACAGCCAGa > 1:5393820/1‑35 (MQ=255) gTGCCATTTGAAGCAGGCAGCGGCCCCAGCCAGAt < 1:18361432/35‑1 (MQ=255) gTGCCATTTGAAGCAGGCAGCGGCCCCAGCCAGAt < 1:8340679/35‑1 (MQ=255) tGCCTTTTGAAGCAGGCAGCGGCCCCAGCCAGATc < 1:16468367/35‑1 (MQ=255) tGCCATTTGAAGCAGGCAGCGGCCCCAGCCAGATc < 1:15436766/35‑1 (MQ=255) tGCCATTTGAAGCAGGCAGCGGCCCCAGCCAGATc < 1:10953098/35‑1 (MQ=255) gCCATTTGAAGCAGGCAGCGGCCCCAGCCAGATCg < 1:7207575/35‑1 (MQ=255) ccATTTGAAGCAGGCAGCGGCCCCAGCCAGATCGa < 1:19432387/35‑1 (MQ=255) cttttGAAGCAGGCAGCGGCCCCAGCCAGATCGAg < 1:1409036/33‑1 (MQ=255) cATTTGAAGCAGGCAGCGGCCCCCGCCAGATCGAg > 1:8669664/1‑35 (MQ=255) cATTTGAAGCAGGCAGCGGCCCCCGCCAGATCGAg > 1:11736842/1‑35 (MQ=255) cATTTGAAGCAGGCAGCGGCCCCAGCCAGATCGAg > 1:12017496/1‑35 (MQ=255) cATTTGAAGCAGGCAGCGGCCCCAGCCAGATCGAg > 1:4635323/1‑35 (MQ=255) cATTTGAAGCAGGCAGCGGCCCCAGCCAGATCGAg > 1:15590423/1‑35 (MQ=255) cATTTGAAGCAGGCAGCGGCCCCAGCCAGATCGAg > 1:10872514/1‑35 (MQ=255) ttttGAAGCAGGCAGCGGCCCCAGCCAGATCGAgc < 1:11668951/34‑1 (MQ=255) aTTTGAAGCAGGCAGCGGCCCCCGCCAGGTCGAgc > 1:8048775/1‑35 (MQ=37) aTTTGAAGCAGGCAGCGGCCCCAGCCAGATCGAgc < 1:7862778/35‑1 (MQ=255) tttGAAGCAGGCAGCGGCCCCAGCCAGATCGAgcg > 1:15626544/1‑35 (MQ=255) ttGAAGCAGGCAGCGGCCCCAGCCAGATCGAgcgc < 1:4308431/35‑1 (MQ=255) ttGAAGCAGGCAGCGGCCCCAGCCAGATCGAgcgc > 1:19728689/1‑35 (MQ=255) tGAAGCAGGCAGCGGCCCCAGCCAGATCGAGCGcc > 1:20376270/1‑35 (MQ=255) gaggcaggcagCGGCCCCAGCCAGATCGAGCGCCa < 1:13327559/32‑1 (MQ=255) gAAGCAGGCAGCGGCCCCAGCCAGATCGAGCGCCa > 1:17625284/1‑35 (MQ=255) aaGCAGGCAGCGGCCCCAGCCAGATCGAGCGCCAt > 1:15822126/1‑35 (MQ=255) aGCGGGCAGCGGCCCCAGCCAGATCGAGCGCCATc < 1:12037005/35‑1 (MQ=255) aGCAGGCAGCTGCCCCAGCCAGATCGAGCGCCATc > 1:8194554/1‑35 (MQ=255) aGCAGGCAGCGGCCCCAGCCAGATCGAGCGCCATc < 1:20108040/35‑1 (MQ=255) aGCAGGCAGCGGCCCCAGCCAGATCGAGCGCCATc < 1:16504485/35‑1 (MQ=255) gcgggcagCGGCCCCAGCCAGATCGAGCGCCATCa < 1:8244765/32‑1 (MQ=255) ccaggcagCGGCCCCAGCCAGATCGAGCGCCATCa < 1:714694/34‑1 (MQ=255) cgggcagCGGCCCCAGACAGATCGAGCGCCATCag < 1:18657288/33‑1 (MQ=38) caggcagCGGCCCCAGCCAGATCGAGCGCCATCag > 1:7212620/1‑35 (MQ=255) caggcagCGGCCCCAGCCAGATCGAGCGCCATCag > 1:2467674/1‑35 (MQ=255) caggcagCGGCCCCAGCCAGATCGAGCGCCATCag < 1:17413332/35‑1 (MQ=255) caggcagCGGCCCCAGCCAGATCGAGCGCCATCag > 1:2865360/1‑35 (MQ=255) aggcagCGGCCCCAGCCAGATCGAGCGCCATCaca > 1:2771283/1‑33 (MQ=255) ggccgCGGCCCcagccagtcgcccatatcttcaaa > 1:6606941‑M2/1‑11 (MQ=255) ggcagCGGCCCCAGCCAGATCGAGCGCCATCagag > 1:7496204/1‑35 (MQ=255) ggcagCGGCCCCAGCCAGATCGAGCGCCATCagag < 1:8105993/35‑1 (MQ=255) ggcagCGGCCCCAGCCAGATCGAGCGCCATCagag < 1:16186595/35‑1 (MQ=255) gcggCGCCCCCAGCCAGATCGAGCGCCATCAGAgg < 1:90565/32‑1 (MQ=37) gcagCGGCCCCAGCCAGATCGAGCGCCATCAGAgg > 1:1123316/1‑35 (MQ=255) gcagCGCCCCCAGCCAGATCGAGCGCCATCAGAgg < 1:10302852/35‑1 (MQ=255) cagCGGCCCCAGCCAGATCGAGCGCCATCAGAGGc > 1:4478603/1‑35 (MQ=255) cagCGGCCCCAGCCAGATCGAGCGCCATCAGAGGc < 1:20225180/35‑1 (MQ=255) cagCGGCCCCAGCCAGATCGAGCGCCATCAGAGGc < 1:15138908/35‑1 (MQ=255) cagCGGCCCCAGCCAGATCGAGCGCCATCAGAGGc > 1:13449893/1‑35 (MQ=255) ggcGGCCCcagccagtcgcccatatcttcaaagac > 1:13004132‑M2/2‑8 (MQ=255) agCGGCCCCAGCCAGATCGAGCGCCATCAGAGGCa > 1:695804/1‑35 (MQ=255) agCGGCCCCAGCCAGATCGAGCGCCATCAGAGGCa > 1:5286685/1‑35 (MQ=255) agCGGCCCCAGCCAGATCGAGCGCCATCAGAGGCa > 1:9611299/1‑35 (MQ=255) agCGGCCCCAGCCAGATCGAGCGCCATCAGAGGCa > 1:15575667/1‑35 (MQ=255) agCGGCCCCAGCCAGATCGAGCGCCATCAGAGGCa > 1:1973936/1‑35 (MQ=255) gCGGCCCcagccagtcgcccatatcttcaaagacg > 1:6691224‑M2/1‑7 (MQ=255) ccgCCCCcagccagtcgcccatatcttcaaagacg > 1:162656‑M2/2‑7 (MQ=255) ggcccccAGCCAGATCGAGCGCCATCAGAGGCaaa < 1:18757502/32‑1 (MQ=255) cGGCCCCAGCCAGATCGAGCGCCATCAGAGGCaaa < 1:10151887/35‑1 (MQ=255) cGCCCCcagccagtcgcccatatcttcaaagacgc > 1:18349036‑M2/1‑6 (MQ=255) ggCCCCAGCCAGATCGAGCGCCATCAGAGGCaaaa > 1:13578036/1‑34 (MQ=255) ggCCCCAGCCAGATCGAGCGCCATCAGAGGCAAAc > 1:2132795/1‑35 (MQ=255) ggCCCCAGCCAGATCGAGCGCCATCAGAGGCAAAc > 1:414112/1‑35 (MQ=255) gcccccagccagtcgcccatatcttcaaagacgct > 1:17817003‑M2/3‑5 (MQ=255) gCCCcagccagtcgcccatatcttcaaagacgctt > 1:4056725‑M2/1‑4 (MQ=255) gCCCcagccagtcgcccatatcttcaaagacgctt > 1:17324112‑M2/1‑4 (MQ=255) cccccagccagtcgcccatatcttcaaagacgctt > 1:16133215‑M2/2‑4 (MQ=255) ccccagccagtcgcccatatcttcaaagacgcttc > 1:2607843‑M2/1‑3 (MQ=255) ccccACCCAGATCGAGCGCCATCAGAGGCAAACGc < 1:12259846/35‑1 (MQ=255) cccagccagtcgcccatatcttcaaagacgcttct > 1:11045371‑M2/1‑2 (MQ=255) cccagccagtcgcccatatcttcaaagacgcttct > 1:6633266‑M2/1‑2 (MQ=255) cccagccagtcgcccatatcttcaaagacgcttct > 1:9396718‑M2/1‑2 (MQ=255) cccAGCCAGATCGAGCGCCATCAGAGGCAAACGCt > 1:3430818/1‑35 (MQ=255) ccagccagtcgcccatatcttcaaagacgcttctt > 1:14590627‑M2/1‑1 (MQ=255) ccagccagtcgcccatatcttcaaagacgcttctt > 1:16607884‑M2/1‑1 (MQ=255) ccagccagtcgcccatatcttcaaagacgcttctt > 1:7309435‑M2/1‑1 (MQ=255) ccagccagtcgcccatatcttcaaagacgcttctt > 1:1978645‑M2/1‑1 (MQ=255) ccagccagtcgcccatatcttcaaagacgcttctt > 1:4635681‑M2/1‑1 (MQ=255) ccagccagATCGAGCGCCATCAGAGGCAAACGCtt < 1:17036920/35‑1 (MQ=255) ccagccagATCGAGCGCCATCAGAGGCAAACGCtt < 1:19467808/35‑1 (MQ=255) ccagccagATCGAGCGCCATCAGAGGCAAACGCtt < 1:2884184/35‑1 (MQ=255) ccagccagATCGAGCGCCATCAGAGGCAAACGCtt > 1:4202690/1‑35 (MQ=255) | AATCTTGAAGTGCCATTTGAAGCAGGCAGCGGCCCCAGCCAGATCGAGCGCCATCAGAGGCAAACGCTT > REL606/3144203‑3144271 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |