New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1889905 | 87 (0.850) | 12 (0.130) | 5/42 | NT | 17.4% | coding (1053/1374 nt) | yebQ | predicted transporter |
? | REL606 | 2379272 = | 38 (0.420) | coding (970/1014 nt) | usg | hypothetical protein |
AGGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1889869‑1889905 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgCCATCAGCGCGCCGCCAAAGCGAACGTTATCGGC > REL606/2379272‑2379305 AGGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCC < 1:13781996/35‑1 ctGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCT < 1:14719510/33‑1 GGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCT < 1:12234309/35‑1 GGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCT < 1:18127280/35‑1 GGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCT < 1:1340560/35‑1 GGGTTGTTCATCATGGATGCGGGGCTTTTTTCCCT < 1:13041265/35‑1 GGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCTG < 1:3070340/35‑1 GGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCTG < 1:16546096/35‑1 cgcGGCTTTTTTCCCTGCCATCAGCGCGCCGCCAA < 1:2480669/32‑1 ccGGGCTTTTTTCCCTGCCATCAGCGCGCCGCCAA < 1:3328865/33‑1 gggTTTTTTCCCTGCCATCAGCGCGCCGCCAAAGC < 1:8997447/32‑1 GGCTTTTTTCCCTGCCATCAGCGCGCCGCCAAAGC < 1:5650751/35‑1 GCTTTTTTCCCTGCCATCAGCGCGCCGCCAAAGCG < 1:1300602/35‑1 GCTTTTTTCCCTGCCATCAGCGCGCAGCCAAAGCG < 1:13900200/35‑1 gTTTTTCCCTGCCATCAGCGCGCCGCCAAAGCGAA < 1:1392205/34‑1 TTTTTTTCCTGCCATCAGCGCGCCGCCAAAGCGAA < 1:4676770/35‑1 TTTTTCCCTGCCATCAGCGCGCCGCCAAAGCGAAC < 1:7328979/35‑1 TTTTCCCTGCCATCAGCGCGCCGCCAAAGCGAACG < 1:5668091/35‑1 TTTTCCCTGCCATCAGCGCGCCGCCAAAGCGAACG < 1:15476900/35‑1 TTTTCCCTGCCATCAGCGCGCCGCCAAAGCGAACG < 1:16873137/35‑1 TTTCCCTGCCATCAGCGCGCCGCCAAAGCGAACGT < 1:7138812/35‑1 tctCCTGCCATCAGCGCGCCGCCAAAGCGAACGTT < 1:17616630/32‑1 TTCCCTGCCATCAGCGCGCCGCCAAAGCGAACGTT < 1:3193041/35‑1 TTCCCTGCCATCAGCGCGCCGCCAAAGCGAACGTT < 1:9634183/35‑1 aCCCTGCCATCAGCGCGCCGCCAAAGCGAACGTTA < 1:11081078/34‑1 tCCTGCCATCAGCGCGCCGCCAAAGCGAACGTTAT < 1:8408564/34‑1 CCTGCCATCAGCGCGCCGCCAAAGCGAACGTTATC < 1:11349244/35‑1 CCTGCCATCAGCGCGCCGCCAAAGCGAACGTTATC < 1:8993298/35‑1 CTGCCATCAGCGCGCCGCCAAAGCGAACGTTATCG < 1:13931828/35‑1 CTGCCATCAGCGCGCCGCCAAAGCGAACGTTATCG > 1:14095834/1‑35 CTGCCATCAGCGCGCCGCCAAAGCGAACGTTATCG < 1:3037976/35‑1 TGCCATCAGCGCGCTGCCAAAGCGAACGTTATCGG > 1:16245478/1‑35 TGCCATCAGCGCGCCGCCAAAGCGAACGTTATCGG < 1:15609270/35‑1 TGCCATCAGCGCGCCGCCAAAGCGAACGTTATCGG < 1:1375175/35‑1 TGCCATCAGCGCGCCGCCAAAGCGAACGTTATCGG < 1:741783/35‑1 TGCCATCAGCGCGCCGCCAAAGCGAACGTTATCGG > 1:3229861/1‑35 TGCCATCAGCGCGCCGCCAAAGCGAACGTTATCGG < 1:18630399/35‑1 TGCCATCAGCGCGCCGCCAAAGCGAACGTTATCGG > 1:9024228/1‑35 TGCCACCAGCGCGCCGCCAAAGCGAACGTTATCGG < 1:20603326/35‑1 GCCATCAGCGCGCCGCCAAAGCGAACGTTATCGGC < 1:4353121/35‑1 GCCATCAGCGCGCCGCCAAAGCGAACGTTATCGGC > 1:3704523/1‑35 GCCATCAGCGCGCCGCCAAAGCGAACGTTATCGGC > 1:11999660/1‑35 AGGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1889869‑1889905 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgCCATCAGCGCGCCGCCAAAGCGAACGTTATCGGC > REL606/2379272‑2379305 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |