New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1112140 = | NA (NA) | 14 (0.140) | 5/48 | NT | 35.9% | noncoding (81/88 nt) | serX | tRNA‑Ser |
? | REL606 | = 3173882 | 25 (0.240) | coding (905/1245 nt) | ygjU | sodium:serine/threonine symporter |
TCCCCCCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1112149‑1112140 ‑‑‑‑‑‑‑‑‑‑CCCGCCATATTGATGGTGGCACCCAGCGGAATAG < REL606/3173882‑3173849 gCCCCCCCCCCCCGCCATATTGATGGTGGCACCCA < 1:14642204/34‑1 cCCCCCCCCCCCCGCCATATTGATGGTGGCACCCA < 1:7594178/34‑1 cCCCCCCCCCCCCGCCATATTGATGGTGGCACCCA < 1:19401678/34‑1 TCCCCCCCCCCCCGCCATATTGATGGTGGCACCCA < 1:9070020/35‑1 CCCCCCCCCCCCGCCATATTGATGGTGGCACCCAG < 1:14161945/35‑1 CCCCCCCCCCCCGCCATATTGATGGTGGCACCCAG < 1:15797588/35‑1 CCCCCCCCCCCCGCCATATTGATGGTGGCACCCAG < 1:3214526/35‑1 CCCCCCCCCCCGCCATATTGATGGTGGCACCCAGC < 1:8732747/35‑1 CCCCCCCCCCGCCATATTGATGGTGGCACCCAGCG < 1:666461/35‑1 CCCCCCCCCGCCATATTGATGGTGGCACCCAGCGG < 1:8015691/35‑1 CCCCCCCCCGCCATATTGATGGTGGCACCCAGCGG < 1:17920451/35‑1 CCCCCCCCCGCCATATTGATGGTGGCACCCAGCGG < 1:16569456/35‑1 CCCCCCCCCGCCATATTGATGGTGGCACCCAGCGG < 1:14454741/35‑1 CCCCCCCCCGCCATATTGATGGTGGCACCCAGCGG < 1:13513223/35‑1 CCCCCCCCGCCATATTGATGGTGGCACCCAGCGGA < 1:19472337/35‑1 CCCCCCCCGCCATATTGATGGTGGCACCCAGCGGA < 1:7592129/35‑1 cccCCCCGCCATATTGATGGTGGCACCCAGCGGAA < 1:16021206/32‑1 ccCCCCGCCATATTGATGGTGGCACCCAGCGGAAT < 1:17714398/33‑1 ccCCCCGCCATATTGATGGTGGCACCCAGCGGAAT < 1:19072227/33‑1 ccCCCCGCCATATTGATGGTGGCACCCAGCGGAAT < 1:16014695/33‑1 cCCCCGCCATATTGATGGTGGCACCCAGCGGAATA < 1:17095838/34‑1 CCCCGCCATATTGATGGTGGCACCCAGCGGAATAG < 1:12603607/35‑1 TCCCCCCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1112149‑1112140 ‑‑‑‑‑‑‑‑‑‑CCCGCCATATTGATGGTGGCACCCAGCGGAATAG < REL606/3173882‑3173849 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |