New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 790656 = | 71 (0.690) | 5 (0.070) | 3/34 | NT | 9.7% | coding (88/186 nt) | ECB_00731 | conserved hypothetical protein |
? | REL606 | 1598222 = | 43 (0.590) | coding (459/1461 nt) | ydfI | predicted mannonate dehydrogenase |
TCGCGTTGCATTTCATCGATAACTTTTGGCGTCATCGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/790696‑790656 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggctgGTGGGGATTTTGCACGTCGGCAGCGACCATCGGG > REL606/1598222‑1598255 TCGCGTTGCATTTCATCGATAACTTTTGGCGTCAT < 1:17353332/35‑1 TCGCGTTGCATTTCATCGATAACTTTTGGCGTCAT > 1:19741354/1‑35 TCGCGTTGCATTTCATCGATAACTTTTGGCGTCAT > 1:14463855/1‑35 TCGCGTTGCATTTCATCGATAACTTTTGGCGTCAT < 1:4688357/35‑1 TCGCGTTGCATTTCATCGATAACTTTTGGCGTCAT > 1:7169466/1‑35 TCGCGTTGCATTTCATCGATAACTTTTGGCGTCAN < 1:10762695/35‑1 CGCGTTGCATTTCATCGATAACTTTTGGCGTCATC > 1:1865322/1‑35 CGCGTTGCATTTCATCGATAACTTTTGGCGTCATC < 1:20252748/35‑1 CGCGTTGCATTTCATCGATAACTTTTGGCGTCATC < 1:15390751/35‑1 CGCGTTGCATTTCATCGATAACTTTTGGCGTCATC < 1:3126440/35‑1 CGCGTTGCATTTCATCGATAACTTTTGGCGTCATC < 1:14797963/35‑1 CGCGTTGCATTTCATCGATAACTTTTGGCGTCATC > 1:14721734/1‑35 CGCGTTGCATTTCATCGATAACTTTTGGCGTCATC > 1:12675728/1‑35 CGCGTTGCATTTCATCGATAACTTTTGGCGTCATC < 1:10619083/35‑1 CGCGTTGCATTTCATCGATAACTTTTGGCGTCATC < 1:1042948/35‑1 CGCGTTGCATTTCATAGATAACTTTTGGCGTCATC < 1:829587/35‑1 GCGTTGCATTTCATCGATAACTTTTGGCGTCATCG < 1:2616123/35‑1 GCGTTGCATTTCATCGATAACTTTTGGCGTCATCG > 1:2616544/1‑35 CGTTGCATTTCATCGATAACTTTTGGCGTCATCGG > 1:13814227/1‑35 CGTTGCATTTCATCGATAACTTTTGGCGTCATCGG > 1:16958282/1‑35 CGTTGCATTTCATCGATAACTTTTGGCGTCATCGG < 1:11423432/35‑1 GTTGCATTTCATCGATAACTTTTGGCGTCATCGGC < 1:19887316/35‑1 GTTGCATTTCATCGATAACTTTTGGCGTCATCGGC > 1:14953269/1‑35 GTTGCATTTCATCGATAACTTTTGGCGTCATCGGC > 1:18668873/1‑35 GTTGCATTTCATCGATAACTTTTGGCGTCATCGGC < 1:8218672/35‑1 GTTGCATTTCATCGATAACTTTTGGCGTCATCGGC > 1:14039173/1‑35 GTTGCATTTCATCGATAACTTTTGGCGTCATCGGC > 1:4117340/1‑35 GTTGCATTTCATCGATAACTTTTGGCGTCATCGGC > 1:413455/1‑35 GTTGCATTTCATCGATAACTTTTGGCGTCATCGGC < 1:5005251/35‑1 GTTGCATTTCATCCATAACTTTTGGCGTCATCGGC > 1:10503817/1‑35 TTGCATTTCATCGATAACTTTTGGCGTCATCGGCT > 1:17667074/1‑35 TTGCATTTCATCGATAACTTTTGGCGTCATCGGCT < 1:16901303/35‑1 TTGCATTTCATCGATAACTTTTGGCGTCATCGGCT < 1:912180/35‑1 TTGCATTTCATCGATAACTTTTGGCGTCATCGGCT > 1:1535609/1‑35 TTGCATTTCATCGATAACTTTTGGCGTCATCGGCT < 1:14896566/35‑1 TTGCATTTCATCGATAACTTTTGGCGTCATCGGCT > 1:7915877/1‑35 TTGCATTTCATCGATAACTTTTGGCGTCATCGGCT < 1:14266635/35‑1 TGCATTTCATCGATAACTTTTGGCGTCATCGGCTG > 1:19913825/1‑35 TGCATTTCATCGATAACTTTTGGCGTCATCGGCTG > 1:19705117/1‑35 TGCATTTCATCGATAACTTTTGGCGTCATCGGCTG < 1:17684706/35‑1 TGCATTTCATCGATAACTTTTGGCGTCATCGGCTG > 1:7803790/1‑35 TGCATTTCATCGATAACTTTTGGCGTCATCGGCTG > 1:12319202/1‑35 TGCATTTCATCGATAACTTTTGGCGTCATCGGCTG > 1:17014259/1‑35 TGCATTTCATCGATAACTTTTGGCGTCATCGGCTG > 1:1301884/1‑35 TGCATTTCATCGATAACTTTTGGCGTCATCGGCTG > 1:16054892/1‑35 TGCATTTCATCGATAACTTTTGGCGTCATCGGCTG < 1:15243795/35‑1 GCATTTCATCGATAACTTTTGGCGTCATCGGCTGG > 1:4689733/1‑35 CATTTCATCGATAACTTTTGGCGTCATCGGCTGGg > 1:13183051/1‑34 ATTTCATCGATAACTTTTGGCGTCATCGGCTGGgg > 1:8541351/1‑33 ATTTCATCGATAACTTTTGGCGTCATCGGCTGGgg > 1:12782306/1‑33 ATTTCATCGATAACTTTTGGCGTCATCGGCTGGgg > 1:15803974/1‑33 ATTTCATCGATAACTTTTGGCGTCATCGGCTGGcg > 1:6989929/1‑33 ATTTCATCGATAACTTTTGGCGTCATCGGCTGGTG > 1:55186/1‑35 TTTCATCGATAACTTTTGGCGTCATCGGCTGGTGG > 1:16360882/1‑35 TTTCATCGATAACTTTTGGCGTCATCGGCTGGTGG > 1:3311714/1‑35 TTCATCGATAACTTTTGGCGTCATCGGCTGGTGcg > 1:17650293/1‑33 TCATCGATAACTTTTGGCGTCATCGGCTGGTGGGc > 1:10834876/1‑34 TCATCGATAACTTTTGGCGTCATCGGCTGGGGGGc > 1:12169571/1‑34 TCATCGATAACTTTTGGCGTCATCGGCTGGGGGGG > 1:13371507/1‑35 CATCGATAACTTTTGGCGTCATCGGCTGGTGGGGA > 1:6573006/1‑35 ATCGATAACTTTTGGCGTCATCGGCTGGTGGGtcc > 1:14827760/1‑32 ATCGATAACTTTTGGCGTCATCGGCTGGTGGGccg > 1:7169365/1‑32 ATCGATAACTTTTGGCGTCATCGGCTGGTGGGGgt > 1:2069212/1‑33 ATCGATAACTTTTGGCGTCATCGGCTGGTGGGGAT > 1:3107425/1‑35 TCGATAACTTTTGGCGTCATCGGCTGGTGGGCATa > 1:7178786/1‑34 TCGGCTGGTGGGGATTTTGCACGTCGGCAGCGACC < 1:19963831/35‑1 GGCTGGTGGGGATTTTGCACGTCGGCAGCGACCAc > 1:17301248/1‑34 GGCTGGTGGGGATTTTGCACGTCGGCAGCGACCAT < 1:17074790/35‑1 GGCTGGTGGGGATTTTGCACGTCGGCAGCGACCAT < 1:7428059/35‑1 GCTGGTGGGGATTTTGCACGTCGGCAGGGACCATC > 1:16812515/1‑35 GCTGGTGGGGATTTTGCACGTCGGCAGCGACCATC > 1:3097965/1‑35 GCTGGTGGGGATTTTGCACGTCGGCAGCGACCATC < 1:736273/35‑1 GCTGGTGGGGATTTTGCACGTCGGCAGCGACCATC < 1:18121086/35‑1 GCTGGTGGGGATTTTGCACGTCGGCAGCGACCATC < 1:17084617/35‑1 GCTGGTGGGGATTTTGCACGTCGGCAGCGACCATC < 1:19501909/35‑1 CTGGTGGGGATTTTGCACGTCGGCAGCGACCATCG > 1:15924824/1‑35 CTGGTGGGGATTTTGCACGTCGGCAGCGACCATCG < 1:11034346/35‑1 GGTGGGGATTTTGCACGTCGGCAGCGACCATCGGG < 1:7183536/35‑1 GGTGGGGATTTTGCACGTCGGCAGCGACCATCGGG > 1:7023805/1‑35 GGTGGGGATTTTGCACGTCGGCAGCGACCATCGGG < 1:8031811/35‑1 GGTGGGGATTTTGCACGTCGGCAGCGACCATCGGG > 1:1149448/1‑35 GGTGGGGATTTTGCACGTCGGCAGCGACCATCGGG < 1:1279270/35‑1 GGTGGGGATTTTGCACGTCGGCAGCGACCATCGGG < 1:9070647/35‑1 GGTGGGGATTTTGCACGTCGGCAGCGACCATCGGG < 1:9126259/35‑1 TCGCGTTGCATTTCATCGATAACTTTTGGCGTCATCGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/790696‑790656 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggctgGTGGGGATTTTGCACGTCGGCAGCGACCATCGGG > REL606/1598222‑1598255 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |