New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2064681 = | 76 (0.740) | 9 (0.120) | 3/36 | NT | 12.3% | coding (596/1218 nt) | wcaC | predicted glycosyl transferase |
? | REL606 | 4179328 = | 71 (0.920) | coding (213/591 nt) | yjaG | hypothetical protein |
Only 100 of 193 total aligned reads displayed.
CCGTTAAAGACGCAAAAGTAAATTTCGACAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCCG > REL606/4179294‑4179362 | ccGTTAAAGACGCAAAAGTAAATTTCGACAGCCaa > 1:8704950/1‑35 (MQ=255) ccGTTAAAGACGCAAAAGTAAATTTCGACAGCCaa > 1:20454706/1‑35 (MQ=255) ccGTTAAAGACGCAAAAGTAAATTTCGACAGCCaa > 1:13486044/1‑35 (MQ=255) cGTTAAAGACGCAAAAGTAAATTTCTACAGCCAAc > 1:12383129/1‑35 (MQ=255) cGTTAAAGACGCAAAAGTAAATTTCGACAGCCAAc > 1:6494494/1‑35 (MQ=255) gTTAAAGACGCAAAAGTAAATTTCGACAGCCAACt > 1:15420063/1‑35 (MQ=255) gTTAAAGACGCAAAAGTAAATTTCGACAGCCAACt > 1:14836243/1‑35 (MQ=255) gTTAAAGACGCAAAAGTAAATTTCGACAGCCAACt > 1:11933227/1‑35 (MQ=255) gTTAAAGACGCAAAAGTAAATTTCGACAGCCAACt > 1:1243091/1‑35 (MQ=255) tAAAGACGCAAAAGTAAATTTCGACAGCCAACTgg > 1:19110216/1‑35 (MQ=255) aaaGACGCAAAAGTAAATTTCGACAGCCAACTGga > 1:10077247/1‑35 (MQ=255) aaaGACGCAAAAGTAAATTTCGACAGCCAACTGga > 1:17422397/1‑35 (MQ=255) aaaGACGCAAAAGTAAATTTCGACAGCCAACTGga > 1:9774550/1‑35 (MQ=255) aaaGACGCAAAAGTAAATTTCCACAGCCAACTGga > 1:9260542/1‑35 (MQ=255) aaGACGCAAAAGTAAATTTCGACAGCCAACTGgag > 1:17256433/1‑35 (MQ=255) aaGACGCAAAAGTAAATTTCGACAGCCAACTGgag > 1:5224327/1‑35 (MQ=255) aaGACGCAAAAGTAAATTTCGACAGCCAACTGgag > 1:10078089/1‑35 (MQ=255) aaGACGCAAAAGTAAATTTCGACAGCCAACTGgag > 1:12106020/1‑35 (MQ=255) aGACGCAAAAGTAAATTTCGACAGCCAACTGgaga > 1:14659740/1‑35 (MQ=255) aGACGCAAAAGTAAATTTCGACAGCCAACTGgaga > 1:18635768/1‑35 (MQ=255) aGACGCAAAAGTAAATTTCGACAGCCAACTGgaga > 1:19347537/1‑35 (MQ=255) aGACGCAAAAGTAAATTTCGACAGCCAACTGgaga > 1:12303042/1‑35 (MQ=255) aCGCAAAAGTAAATTTCGACAGCCAACTGGAGaaa > 1:2500059/1‑35 (MQ=255) aCGCAAAAGTAAATTTCGACAGCCAACTGGAGaaa > 1:13725095/1‑35 (MQ=255) aCGCAAAAGTAAATTTCGACAGCCAACTGGAGaaa > 1:11982059/1‑35 (MQ=255) aCGCAAAAGTAAATTTCGACAGCCAACTGGAGaaa > 1:5287162/1‑35 (MQ=255) aCGCAAAAGTAAATTACGACAGCCAACTGGAGaaa > 1:5646314/1‑35 (MQ=255) cGCAAAAGTAAATTTCGACAGCCAACTGGAGAAAt > 1:6280516/1‑35 (MQ=255) cGCAAAAGTAAATTTCGACAGCCAACTGGAGAAAt > 1:23718/1‑35 (MQ=255) cGCAAAAGTAAATTTCGACAGCCAACTGGAGAAAt > 1:8969979/1‑35 (MQ=255) gCAAAAGTAAATTTCGACAGCCAACTGGAGAAAtt > 1:12837832/1‑35 (MQ=255) gCAAAAGTAAATTTCGACAGCCAACTGGAGAAAtt > 1:11140238/1‑35 (MQ=255) gCAAAAGTAAATTTCGACAGCCAACTGGAGAAAtt > 1:18005656/1‑35 (MQ=255) cAAAAGTAAATTTCGACAGCCAACTGGAGAAAttt > 1:4291321/1‑35 (MQ=255) cAAAAGTAAATTTCGACAGCCAACTGGAGAAAttt > 1:15042968/1‑35 (MQ=255) aaaaaGTAATTTCCCCCAGCCAACTGGAGAAAttt < 1:10308167/34‑1 (MQ=16) aaaGTAAATTTCGACAGCCAACTGGAGAAATTTga > 1:988721/1‑35 (MQ=255) aaaGTAAATTTCGACAGCCAACTGGAGAAATTTga > 1:15164775/1‑35 (MQ=255) aaGTAAATTTCGCCAGCCAACTGGAGAAATTTgaa < 1:6004765/35‑1 (MQ=255) aaGTAAATTTCGACAGCCAACTGGAGAAATTTgaa > 1:19991798/1‑35 (MQ=255) aGTAAATTTCGACAGCCAACTGGAGAAATTTgaag > 1:2765900/1‑35 (MQ=255) aGTAAATTTCGACAGCCAACTGGAGAAATTTgaag > 1:3597459/1‑35 (MQ=255) aGTAAATTTCGACAGCCAACTGGAGAAATTTgaag > 1:15693869/1‑35 (MQ=255) aGTAAATTTCGACAGCCAACTGGAGAAATTTgaag > 1:20195258/1‑35 (MQ=255) aGTAAATTTCGACAGCCAACTGGAGAAATTTgaag > 1:12592490/1‑35 (MQ=255) gTAAATTTCGACAGCCAACTGGAGAAATTTgaaga > 1:11443588/1‑35 (MQ=255) aaaatttcccccagccaACTGGAGAAATTTgaaga < 1:4553460‑M2/18‑1 (MQ=255) tAAATTTCGACAGCCAACTGGAGAAATTTgaagaa > 1:14308771/1‑35 (MQ=255) tAAATTCCCCCAGCCAACTGGAGAAATTTgaagaa < 1:444530/35‑1 (MQ=25) tAAATTCCCCCAGCCAACTGGAGAAATTTgaagaa < 1:1023067/35‑1 (MQ=25) tAAATTCCCCCAGCCAACTGGAGAAATTTgaagaa < 1:11463966/35‑1 (MQ=25) aaTTTCGACAGCCAACTGGAGAAATTTGAAGAAGc > 1:18821686/1‑35 (MQ=255) aaTTTCGACAGCCAACTGGAGAAATTTGAAGAAGc > 1:5929911/1‑35 (MQ=255) tttcccccagccaACTGGAGAAATTTGAAGAAGCg < 1:6145948‑M2/22‑1 (MQ=255) attccgccagccaACTGGAGAAATTTGAAGAAGCg < 1:20568271‑M2/22‑1 (MQ=255) ttcccccagccaACTGGAGAAATTTGAAGAAGCGa < 1:4988885‑M2/23‑1 (MQ=255) ttCGCCAGCCAACTGGAGAAATTTGAAGAAGCGAt < 1:17795792/35‑1 (MQ=255) ttCGACAGCCAACTGGAGAAATTTGAAGAAGCGAt > 1:12872584/1‑35 (MQ=255) ttCGACAGCCAACTGGAGAAATTTGAAGAAGCGAt > 1:5131788/1‑35 (MQ=255) tCGACAGCCAACTGGAGAAATTTGAAGAAGCGAtt > 1:13064807/1‑35 (MQ=255) cccccagccaACTGGAGAAATTTGAAGAAGCGAtt < 1:19633935‑M2/25‑1 (MQ=255) cccccagccaACTGGAGAAATTTGAAGAAGCGAtt < 1:4665525‑M2/25‑1 (MQ=255) cccccagccaACTGGAGAAATTTGAAGAAGCGAtt < 1:17100819‑M2/25‑1 (MQ=255) ccccagccaACTGGAGAAATTTGAAGAAGCGATTc < 1:15332278‑M2/26‑1 (MQ=255) cGACAGCCAACTGGAGAAATTTGAAGAAGCGATTc > 1:8178535/1‑35 (MQ=255) cGACAGCCAACTGGAGAAATTTGAAGAAGCGATTc > 1:18335468/1‑35 (MQ=255) gccagccaACTGGAGAAATTTGAAGAAGCGATTcc < 1:15808008‑M2/27‑1 (MQ=255) gACAGCCAACTGGAGAAATTTGAAGAAGCGATTcc > 1:8120520/1‑35 (MQ=255) gACAGCCAACTGGAGAAATTTGAAGAAGCGATTcc > 1:13347017/1‑35 (MQ=255) cccagccaACTGGAGAAATTTGAAGAAGCGATTcc < 1:348107‑M2/27‑1 (MQ=255) aCAGCCAACTGGAGAAATTTGAAGAAGCGATTCCt > 1:11799064/1‑35 (MQ=255) aCAGCCAACTGGAGAAATTTGAAGAAGCGATTCCt > 1:18875865/1‑35 (MQ=255) cagccaACTGGAGAAATTTGAAGAAGCGATTCCtt < 1:3621379‑M2/29‑1 (MQ=255) cagccaACTGGAGAAATTTGAAGAAGCGATTCCtt < 1:13954966‑M2/29‑1 (MQ=255) cagccaACTGGAGAAATTTGAAGAAGCGATTCCtt > 1:19705683‑M2/7‑35 (MQ=255) cagccaACTGGAGAAATTTGAAGAAGCGATTCCtt > 1:16208999‑M2/7‑35 (MQ=255) cagccaACTGGAGAAATTTGAAGAAGCGATTCCtt < 1:18549264‑M2/29‑1 (MQ=255) agccaACTGGAGAAATTTGAAGAAGCGATTCCTTc > 1:13825741‑M2/6‑35 (MQ=255) agccaACTGGAGAAATTTGAAGAAGCGATTCCTTc < 1:20263342‑M2/30‑1 (MQ=255) gccgACTGGAGAAATTTGAAGAAGCGATTCCTTCa < 1:14114589‑M2/31‑1 (MQ=255) gccaACTGGAGAAATTTGAAGAAGCGATTCCTTCa < 1:2694775‑M2/31‑1 (MQ=255) gccaACTGGAGAAATTTGAAGAAGCGATTCCTTCa < 1:15938525‑M2/31‑1 (MQ=255) gccaACTGGAGAAATTTGAAGAAGCGATTCCTTCa > 1:8525387‑M2/5‑35 (MQ=255) gccaACTGGAGAAATTTGAAGAAGCGATTCCTTCa < 1:12253835‑M2/31‑1 (MQ=255) gccaACTGGAGAAATTTGAAGAAGCGATTCCTTCa > 1:14270‑M2/5‑35 (MQ=255) gccaACTGGAGAAATTTGAAGAAGCGATTCCTTCa < 1:12912670‑M2/31‑1 (MQ=255) ccaACTGGAGAAATTTGAAGAAGCGATTCCTTCAg > 1:7570409‑M2/4‑35 (MQ=255) ccaACTGGAGAAATTTGAAGAAGCGATTCCTTCAg < 1:8817181‑M2/32‑1 (MQ=255) caACTGGAGAAATTTGAAGAAGCGATTCCTTCAGc > 1:18460042‑M2/3‑35 (MQ=255) caACTGGAGAAATTTGAAGAAGCGATTCCTTCAGc > 1:20036637‑M2/3‑35 (MQ=255) caACTGGAGAAATTTGAAGAAGCGATTCCTTCAGc > 1:1055468‑M2/3‑35 (MQ=255) caACTGGAGAAATTTGAAGAAGCGATTCCTTCAGc < 1:4274464‑M2/33‑1 (MQ=255) aACTGGAGAAATTTGAAGAAGCGATTCCTTCAGcc > 1:18919102‑M2/2‑35 (MQ=255) aACTGGAGAAATTTGAAGAAGCGATTCCTTCAGcc < 1:7791486‑M2/34‑1 (MQ=255) aACTGGAGAAATTTGAAGAAGCGATTCCTTCAGcc < 1:280647‑M2/34‑1 (MQ=255) aACTGGAGAAATTTGAAGAAGCGATTCCTTCAGcc > 1:16079632‑M2/2‑35 (MQ=255) aACTGGAGAAATTTGAAGAAGCGATTCCTTCAGcc > 1:11301926‑M2/2‑35 (MQ=255) aCTGGAGAAATTTGAAGAAGCGATTCCTTCAGCcg > 1:3202968/1‑35 (MQ=255) aCTGGAGAAATTTGAAGAAGCGATTCCTTCAGCcg > 1:2870215/1‑35 (MQ=255) aCTGGAGAAATTTGAAGAAGCGATTCCTTCAGCcg < 1:6809342/35‑1 (MQ=255) | CCGTTAAAGACGCAAAAGTAAATTTCGACAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCCG > REL606/4179294‑4179362 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |