New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 4187069 | 83 (0.810) | 13 (0.170) | 5/36 | NT | 15.8% | coding (49/1590 nt) | purH | bifunctionalphosphoribosylaminoimidazolecarboxam ide formyltransferase/IMP cyclohydrolase |
? | REL606 | = 4402608 | 76 (0.990) | intergenic (+67/+62) | sgaE/yjfY | L‑ribulose 5‑phosphate 4‑epimerase/hypothetical protein |
GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4187030‑4187069 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctttTTTTGAAAAACGGCTGCGGAATTAGACCAGTTAT < REL606/4402608‑4402575 GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG < 1:10336442/35‑1 GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG < 1:7321746/35‑1 GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG < 1:6716926/35‑1 GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG > 1:17806677/1‑35 GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG > 1:15811713/1‑35 GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG < 1:18445854/35‑1 GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG > 1:19391300/1‑35 GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG < 1:20345333/35‑1 GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG < 1:20002461/35‑1 TGCGGAAAGTGCCTGGGCGAATTCGACGATACCGG > 1:16155157/1‑35 TGCGGAAAGTGCCTGGGCGAATTCGACGATACCGG < 1:16896466/35‑1 TGCGGAAAGTGCCTGGGCGAATTCGACGATACCGG < 1:13300529/35‑1 TGCGGAAAGTGCCTGGGCGAATTCGACGATACCGG < 1:4125728/35‑1 GCGGAAAGTGCCTGGGCGAATTCGACGATACCGGC > 1:19116729/1‑35 GCGGAAAGTGCCTGGGCGAATTCGACGATACCGGC > 1:3814523/1‑35 CGGAAAGTGCCTGGGCGAATTCGACGATACCGTCT > 1:14897289/1‑35 CGGAAAGTGCCTGGGCGAATTCGACGATACCGGCT < 1:1920131/35‑1 CGGAAAGTGCCTGGGCGAATTCGACGATACCGGCT > 1:15469193/1‑35 GGAAAGTGCCTGGGCGAATTCGACGATACCGGCTT < 1:18901531/35‑1 GGAAAGTGCCTGGGCGAATTCGACGATACCGGCTT > 1:5753435/1‑35 GGAAAGTGCCTGGGCGAATTCGACGATACCGGCTT > 1:8747916/1‑35 GGAAAGTGCCTGGGCGAATTCGACGATACCGGCTT > 1:9971432/1‑35 GGAAAGTGCCTGGGCGAATTCGACGATACCGGCTT < 1:13660480/35‑1 GGAAAGTGCATGGGCGAATTCGACGATACCGGCTT < 1:18944569/35‑1 GAAAGTGCCTGGGCGAATTCGGCGATACCGGCTTT < 1:12237830/35‑1 GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT > 1:5427390/1‑35 GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT > 1:17392109/1‑35 GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT < 1:7870730/35‑1 GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT > 1:18386881/1‑35 GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT > 1:6435753/1‑35 GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT > 1:6414047/1‑35 AAAGTGCCTGGGCGAATTCGACGATACCGGCTTTT > 1:5751959/1‑35 AAAGTGCCTGGGCGAATTCGACGATACCGGCTTTT > 1:11441834/1‑35 AAAGTGCCTGGGCGAATTCGACGATACCGGCTTTT > 1:6076953/1‑35 AAGTGCCTGGGCGAATTCGACGATACCGGCTTTTT > 1:15855480/1‑35 AAGTGCCTGGGCGAATTCGACGATACCGGCTTTTT > 1:19663981/1‑35 AGTTCCTGGGCGAATTCGACGATACCGGCTTTTTc > 1:2126150/1‑34 AGTGCCTGGGCGAATTCGACGATACCGGCTTTTTT > 1:6489228/1‑35 GTGCCTGGGCGAATTCGACGATACCGGCTTTTTca > 1:8365941/1‑33 TGCCTGGGCGAATTCGACGATACCGGCTTTTTCTG > 1:8617602/1‑35 TGCCTGGGCGAATTCGACGATACAGGCTTTTTTTa > 1:3426095/1‑34 GCCTGGGCGAATTCGACGATACCGGCTTTTTTaca > 1:7788883/1‑32 CCTGGGCGAATTCGACGATACCGGCTTTTTTTGAA > 1:7917367/1‑35 CCTGGGCGAATTCGACGATACCGGCTTTTTTAGAA > 1:6114756/1‑35 CTGGGCGAATTCGACGATACCGGCTTTTTTTGAAA > 1:12905056/1‑35 TGGGCGAATTCGACGATACCGGCTTTTTTTGAAAA > 1:16634873/1‑35 TGGGCGAATTCGACGATACCGGCTTTTTTTGAAAA > 1:19044980/1‑35 TGGGCGAATTCGACGATACCGGCTTTTTTAGAAAc > 1:13407386/1‑34 GGGCGAATTCGACGATACCGGCTTTTTTTGAAAAA > 1:5182341/1‑35 GGCGAATTCGACGATACCGGCTTTTTTTGAAACAC > 1:10819775/1‑35 GGCGAATTCGACGATACCGGCTTTTTTCGAAAAAa > 1:10131480/1‑34 GGCGAATTCGACGATACCGGCTTTTTTAGAAAAAa > 1:19478113/1‑34 CGAATTCGACGATACCGGCTTTTTTTGAAAAACcg > 1:17311248/1‑33 GAATTCGACGATACCGGCTTTTTTTGAAAAACtga > 1:20597282/1‑32 GAATTCGACGATACCGGCTTTTTTTGAAAAACtca > 1:17985605/1‑32 GGCTTTTTTTGAAAAACGGCTGCGGAATTAGACCA < 1:1924920/35‑1 GGCTTTTTTTGAAAAACGGCTGCGGAATTAGACCA < 1:4319175/35‑1 GGCTTTTTTTGAAAAACGGCTGCGGAATTAGACCA > 1:4648186/1‑35 GGCTTTTTTTGAAAAACGGCTGCGGAATTAGACCA < 1:18931760/35‑1 GGCTTTTTTTGAAAAACGGCCGCGGAATTAGACCA > 1:5410087/1‑35 GCTTTTTTTGAAAAACGGCTGCGGAATTAGACCAG < 1:7614877/35‑1 GCTTTTTTTGAAAAACGGCTGCGGAATTAGACCAG < 1:5822437/35‑1 GCTTTTTTTGAAAAACGGCTGCGGAATTAGACCAG < 1:19076849/35‑1 CTTTTTTTGAAAAACGGCTGCGGAATTAGACCAGT < 1:14662376/35‑1 CTTTTTTTGAAAAACGGCTGCGGAATTAGACCAGT > 1:14344770/1‑35 CTTTTTTTGAAAAACGGCTGCGGAATTAGACCAGT < 1:17521877/35‑1 CTTTTTTTGAAAAACGGCTGCGGAATTAGACCAGT < 1:3755404/35‑1 TTTTTTTGAAAAACGGCTGCGGAATTAGACCAGTT > 1:2052818/1‑35 TTTTTTTGAAAAACGGCTGCGGAATTAGACCAGTT < 1:3237325/35‑1 TTTTTTTGAAAAACGGCTGCGGAATTAGACCAGTT < 1:14907281/35‑1 TTTTTTTGAAAAACGGCTGCGGAATTAGACCAGTT < 1:14352927/35‑1 TTTTTTGAAAAACGGCTGCGGAATTAGACCAGTTA < 1:18424991/35‑1 TTTTTTGAAAAACGGCTGCGGAATTAGACCAGTTA < 1:15890470/35‑1 TTTTTTGAAAAACGGCTGCGGAATTAGACCAGTTA < 1:1384223/35‑1 TTTTTGAAAAACGGCTGCGGAATTAGACCAGTTAT > 1:10444375/1‑35 TTTTTGAAAAACGGCTGCGGAATTAGACCAGTTAT < 1:10415131/35‑1 TTTTTGAAAAACGGCTGCGGAATTAGACCAGTTAT < 1:9854235/35‑1 GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4187030‑4187069 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctttTTTTGAAAAACGGCTGCGGAATTAGACCAGTTAT < REL606/4402608‑4402575 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |