New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2017663 = | 30 (0.290) | 18 (0.200) | 5/42 | NT | 23.5% | intergenic (‑158/+109) | yeeF/yeeY | predicted amino‑acid transporter/predicted DNA‑binding transcriptional regulator |
? | REL606 | 3912266 = | 91 (1.010) | intergenic (+46/‑94) | ilvL/ilvG | ilvG operon leader peptide/acetolactate synthase II, valine insensitive, large subunit |
Only 100 of 101 total aligned reads displayed.
TTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTT > REL606/2017629‑2017696 | ttGGTATGAATGATTGGTTTGAAGCAAAAAATAAc < 1:16884627/35‑1 (MQ=255) tGGTATGAATGATTGGTTTGAAGCAAAAAATAAcc > 1:19855160/1‑35 (MQ=255) tGGTATGAATGATTGGTTTGAAGCAAAAAATAAcc > 1:9446561/1‑35 (MQ=255) tGGTATGAATGATTGGTTTGAAGCAAAAAATAAcc < 1:5804076/35‑1 (MQ=255) tGGTATGAATGATTGGTTTGAAGCAAAAAATAAcc > 1:13987185/1‑35 (MQ=255) ggTATGAATGATTGGTTTGAAGCAAAAAATAACCg > 1:17868938/1‑35 (MQ=255) ggTATGAATGATTGGTTTGAAGCAAAAAATAACCg < 1:3516634/35‑1 (MQ=255) ggTATGAATGATTGGTTTGAAGCAAAAAATAACCg > 1:6479511/1‑35 (MQ=255) gTATGAATGATTGGTTTGAAGCAAAAAATAACCGa > 1:16313025/1‑35 (MQ=255) tATGAATGATTGGTTTTAAGCAAAAAATAACCGAc > 1:485115/1‑35 (MQ=255) tATGAATGATTGGTTTGAAGCAAAAAATAACCGAc > 1:16625109/1‑35 (MQ=255) tATGAATGATTGGTTTGAAGCAAAAAATAACCGAc > 1:8284870/1‑35 (MQ=255) tATGAATGATTGGTTTGAAGCAAAAAATAACCGAc > 1:13541825/1‑35 (MQ=255) tATGAATGATTGGTTTGAAGCAAAAAATAACCGAc > 1:13452363/1‑35 (MQ=255) tATGAATGATTGGTTTGAAGCAAAAAATAACCGAc > 1:6648635/1‑35 (MQ=255) tgaatgaTTGGTTTGAAGCAAAAAATAACCGACGc > 1:5807193/1‑35 (MQ=255) tgaatgaTTGGTTTGAAGCAAAAAATAACCGACGc > 1:10015809/1‑35 (MQ=255) tgaatgaTTGGTTTGAAGCAAAAAATAACCGACGc > 1:8017254/1‑35 (MQ=255) tgaatgaTTGGTTTGAAGCAAAAAATAACCGACGc > 1:11966605/1‑35 (MQ=255) gaatgaTTGGTTTGAAGCAAAAAATAACCGACGCt > 1:16954707/1‑35 (MQ=255) gaatgaTTGGTTTGAAGCAAAAAATAACCGACGCt > 1:14942341/1‑35 (MQ=255) aatgaTTGGTTTGAAGCAAAAAATAACCGACGCtg > 1:8048352/1‑35 (MQ=255) aatgaTTGGTTTGAAGCAAAAAATAACCGACGCtg > 1:6840273/1‑35 (MQ=255) atgaTTGGTTTGAAGCAAAAAATAACCGACGCtga > 1:19788736/1‑35 (MQ=255) atgaTTGGTTTGAAGCAAAAAATAACCGACGCtga > 1:2174060/1‑35 (MQ=255) atgaTTGGTTTGAAGCAAAAAATAACCGACGCtga > 1:16892731/1‑35 (MQ=255) atgaTTGGTTTGAAGCAAAAAATAACCGACGCtga > 1:3649521/1‑35 (MQ=255) atgaTTGGTTTGAAGCAAAAAATAACCGACGCtga > 1:13908688/1‑35 (MQ=255) tgaTTTGTTTGAAGCAAAAAATAACCGACGCtgat > 1:5170079/1‑35 (MQ=255) tgaTTGGTTTGAAGCAAAAAATAACCGACGCtgat > 1:18304141/1‑35 (MQ=255) tgaTTGGTTTGAAGCAAAAAATAACCGACGCtgat > 1:12981465/1‑35 (MQ=255) tgaTTGGTTTGAAGCAAAAAATAACCGACGCtgat > 1:8514613/1‑35 (MQ=255) gaTTGGTTTGAAGCAAAAAATAACCGACGCttatg > 1:13133895/1‑35 (MQ=255) gaTTGGTTTGAAGCAAAAAATAACCGACGCtgatg > 1:14004473/1‑35 (MQ=255) gaTTGGTTTGAAGCAAAAAATAACCGACGCtgatg > 1:230471/1‑35 (MQ=255) gaTTGGTTTGAAGCAAAAAATAACCGACGCtgatg > 1:16627390/1‑35 (MQ=255) gaTTGGTTTGAAGCAAAAAATAACCGACGCtgatg > 1:7051130/1‑35 (MQ=255) aTTGGTTTGAAGCAAAAAATAACCGACGCtgatga > 1:15936960/1‑35 (MQ=255) aTTGGTTTGAAGCAAAAAATAACCGACGCtgatga > 1:2465977/1‑35 (MQ=255) aTTGGTTTGAAGCAAAAAATAACCGACGCtgatga > 1:10405637/1‑35 (MQ=255) tGGTTTGAAGCAAAAAATAACCGACGCTGATGaaa > 1:6242998/1‑35 (MQ=255) tGGTTTGAAGCAAAAAATAACCGACGCTGATGaaa > 1:9818029/1‑35 (MQ=255) ggTTTGAAGCAAAAAATAACCGACGCTGATGAAAc > 1:7037013/1‑35 (MQ=255) ggTTTGAAGCAAAAAATAACCGACGCTGATGAAAc > 1:5132981/1‑35 (MQ=255) gTTTGAAGCAAAAAATAACCGACGCTGATGAAACG > 1:697839‑M1/1‑35 (MQ=255) tttGAAGCAAAAAATAACCGACGCTGATGAAACGT > 1:16845628‑M1/1‑35 (MQ=255) tttGAAGCAAAAAATAACCGACGCTGATGAAACGT > 1:15411166‑M1/1‑35 (MQ=255) ttGAAGCAAAAAATAACCGACGCTGATGAAACGTC > 1:4884183‑M1/1‑35 (MQ=255) ttGAAGCAAAAAATAACCGACGCTGATGAAACGTC > 1:11198432‑M1/1‑35 (MQ=255) tGAAGCAAAAAATAACCGACGCTGATGAAACGTCG > 1:9767672‑M1/1‑35 (MQ=255) tGAAGCAAAAAATAACCGACGCTGATGAAACGTCG > 1:1566639‑M1/1‑35 (MQ=255) tGAAGCAAAAAATAACCGACGCTGATGAAACGTCG > 1:17919033‑M1/1‑35 (MQ=255) tGAAGCAAAAAATAACCGACGCTGATGAAACGTCG > 1:18642576‑M1/1‑35 (MQ=255) gAAGCAAAAAATAACCGACGCTGATGAAACGTCGG > 1:18311982‑M1/1‑35 (MQ=255) aaaaaaaaaacccCCGACGCTGATGAAACGTCGGt > 1:6223666‑M1/14‑35 (MQ=255) aaaaaaaaaacccCCGACGCTGATGAAACGTCGGt > 1:16882405‑M1/14‑35 (MQ=255) aaGCAAAAAATAACCGACGCTGATGAAACGTCGGg > 1:10554303‑M1/1‑34 (MQ=255) aaGCAAAAAATAACCGACGCTGATGAAACGTCGGg > 1:10668556‑M1/1‑34 (MQ=255) aaaaaaaaccccCCGACGCTGATGAAACGTCGGtt > 1:5180529‑M1/13‑35 (MQ=255) aaaaaaaaacccCCGACGCTGATGAAACGTCGGtt > 1:10243371‑M1/13‑35 (MQ=255) aGCAAAAAATAACCGACGCTTATGAAACGTCGGgg > 1:2782853‑M1/1‑33 (MQ=255) aGCAAAAAATAACCGACGCTGATGAAACGTCGGgg > 1:14884115‑M1/1‑33 (MQ=255) aGCAAAAAATAACCGACGCTGATGAAACGTCGGgg > 1:18456030‑M1/1‑33 (MQ=255) aGCAAAAAATAACCGACGCTGATGAAACGTCGGgg > 1:6752896‑M1/1‑33 (MQ=255) gCAAAAAATAACCGACGCTGATGAAACGTCGGggt > 1:13223610‑M1/1‑32 (MQ=255) gCAAAAAATAACCGACGCTGATGAAACGTCGGggt > 1:3748288‑M1/1‑32 (MQ=255) aaaaaaaacccCCGACGCTGATGAAACGTCGGttt > 1:5702640‑M1/12‑35 (MQ=255) cAAAAAATAACCGACGCTGATGAAACGTCGGggtt > 1:19347786‑M1/1‑31 (MQ=255) aaaaaaccccCCGACGCTGATGAAACGTCGGtttt > 1:1111737‑M1/11‑35 (MQ=255) aaaaaaccccCCGACGCTGATGAAACGTCGGtttt > 1:10421962‑M1/11‑35 (MQ=255) aaaaaaacccCCGACGCTGATGAAACGTCGGtttt > 1:15893402‑M1/11‑35 (MQ=255) aaaaaaacccCCGACGCTGATGAAACGTCGGtttt > 1:12780314‑M1/11‑35 (MQ=255) aaaaaaacccCCGACGCTGATGAAACGTCGGtttt > 1:8058193‑M1/11‑35 (MQ=255) aaaaaaTAACCGACGCTGATGAAACGTCGGggttt > 1:13783270‑M1/1‑30 (MQ=255) aaaaaaTAACCGACGCTGATGAAACGTCGGggttt > 1:15289764‑M1/1‑30 (MQ=255) aaaaccccCCGACGCTGATGAAACGTCGGTTTTTa > 1:5798182‑M1/9‑35 (MQ=255) aaaaacccCCGACGCTGATGAAACGTAGGTTTTTa > 1:5424980‑M1/9‑35 (MQ=255) aaaaacccCAGACGCTGATGAAACGTCGGTTTTTa > 1:902871‑M1/9‑35 (MQ=255) aaaccccCCGACGCTGATGAAACGTCGGTTTTTAg > 1:10934208‑M1/8‑35 (MQ=255) aaaacccCCGACGCTGATGAAACGTCGGTTTTTAg > 1:10625995‑M1/8‑35 (MQ=255) aaaaTAACCGACGCTGATGAAACGTCGGgtttttg > 1:18455566‑M1/1‑28 (MQ=255) aaaaTAACCGACGCTGATGAAACGTCGGggttttt > 1:14657661‑M1/1‑28 (MQ=255) aaaaTAACCGACGCTGATGAAACGTCGGggttttt > 1:16352585‑M1/1‑28 (MQ=255) aaaaTAACCGACGCTGATGAAACGTCGGggttttt > 1:8859657‑M1/1‑28 (MQ=255) aaccccCCGACGCTGATGAAACGTCGGTTTTTAGt > 1:9056801‑M1/7‑35 (MQ=255) aaccccCCGACGCTGATGAAACGTCGGTTTTTAGt > 1:20276429‑M1/7‑35 (MQ=255) aaacccCCGACGCTGATGAAACGTCGGTTTTTAGt > 1:19030614‑M1/7‑35 (MQ=255) aaaTAACCGACGCTGATGAAACGTCGGggtttttt > 1:15369435‑M1/1‑27 (MQ=255) aaaTAACCGACGCTGATGAAACGTCGGggtttttt > 1:3466032‑M1/1‑27 (MQ=255) aaaTAACCGACGCTGATGAAACGTCGGggtttttg > 1:11931193‑M1/1‑27 (MQ=255) aaaTAACCGACGCTGATGAAACGTCGGggttttgt > 1:2611915‑M1/1‑27 (MQ=255) aaaTAACCGACGCTGATGAAACGTCGGggttttgt > 1:5508404‑M1/1‑27 (MQ=255) aaaTAACCGACGCTGATGAAACGTCGGGTTTTAGt > 1:13244619/1‑35 (MQ=255) aaTAACCGACGCTGATGAAACGTCGGggttttttt > 1:9333497‑M1/1‑26 (MQ=255) aaTAACCGACGCTGATGAAACGTCGGggttttgtc > 1:19596341‑M1/1‑26 (MQ=255) acccCCGACGCTGATGAAACGTCGGTTTTTAGTCa > 1:1279604‑M1/5‑35 (MQ=255) aTAACCGACGCTGATGAAACGTCGGggttttttta > 1:17641764‑M1/1‑25 (MQ=255) tAACCGACGCTGATGAAACGTCGGggtttttttat > 1:3743737‑M1/1‑24 (MQ=255) ccCCGACGCTGATGAAACGTCGGTTTTTAGTCAtt > 1:17216064‑M1/3‑35 (MQ=255) aCCGACGCTGATGAAACGTCGGGGTTTTGTCAttt > 1:9872623/1‑35 (MQ=25) | TTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTT > REL606/2017629‑2017696 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |