New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 140702 = | 57 (0.550) | 10 (0.130) | 3/36 | NT | 18.6% | coding (817/1551 nt) | cueO | multicopper oxidase (laccase) |
? | REL606 | 1349560 = | 45 (0.580) | intergenic (‑152/+216) | fabI/ycjD | enoyl‑(acyl carrier protein) reductase/hypothetical protein |
CCACCAGCACTTCAAAACGCTCGCCCATCAGCACCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/140741‑140702 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcagGGGGGGCGCTTT > REL606/1349560‑1349571 CCACCAGCACTTCAAAACGCTCGCCCATCAGCACC > 1:17494988/1‑35 CCACCAGCACTTCAAAACGCTCGCCCATCAGCACC < 1:3854060/35‑1 CCACCAGCACTTCAAAACGCTCGCCCATCAGCACC > 1:7744959/1‑35 CCACCAGCACTTCAAAACGCTCGCCCATCAGCACC < 1:7113485/35‑1 CACCAGCACTTCAAAACGCTCGCCCATCAGCACCG > 1:20037079/1‑35 CACCAGCACTTCAAAACGCTCGCCCATCAGCACCG < 1:13888356/35‑1 CACCAGCACTTCAAAACGCTCGCCCATCAGCACCG < 1:7005772/35‑1 CACCAGCACTTCAAAACGCTCGCCCATCAGCACCG < 1:10722583/35‑1 CACCAGCACTTCAAAACGCTCGCCCATCAGCACCG < 1:4461461/35‑1 ACCAGCACTTCAAAACGCTCGCCCATCAGCACCGG > 1:11084323/1‑35 ACCAGCACTTCAAAACGCTCGCCCATCAGCACCGG > 1:2695974/1‑35 ACCAGCACTTCAAAACGCTCGCCCATCAGCACCGG < 1:15416851/35‑1 CCAGCACTTCAAAACGCTCGCCCATCAGCACCGGC < 1:2791494/35‑1 CCAGCACTTCAAAACGCTCGCCCATCAGCACCGGC < 1:6626257/35‑1 CCAGCACTTCAAAACGCTCGCCCATCAGCACCGGC < 1:13589616/35‑1 CCAGCACTTCAAAACGCTCGCCCATCAGCACCGGC < 1:5852571/35‑1 CCAGCACTTCAAAACGCTCGCCCATCAGCACCGGC > 1:14444879/1‑35 CAGCACTTCAAAACGCTCGCCCATCAGCACCTGCA > 1:4822484/1‑35 CAGCACTTCAAAACGCTCGCCCATCAGCACCGGCA < 1:16566959/35‑1 CAGCACTTCAAAACGCTCGCCCATCAGCACCGGCA > 1:10727357/1‑35 CAGCACTTCAAAACGCTCGCCCATCAGCACCGGCA > 1:12693410/1‑35 CAGCACTTCAAAACGCTCGCCCATCAGCACCGGCA > 1:12299800/1‑35 AGCACTTTAAAACGCTCGCCCATCAGCACCGGCAG > 1:9680457/1‑35 AGCACTTCAAAACGCTCGCCCATCAGCACCGGCAG < 1:5495352/35‑1 AGCACTTCAAAACGCTCGCCCATCAGCACCGGCAG < 1:10711030/35‑1 AGCACTTCAAAACGCTCGCCCATCAGCACCGGCAG > 1:6256999/1‑35 AGCACTTCAAAACGCTCGCCCATCAGCACCGGCAG > 1:10952812/1‑35 AGCACTTCAAAACGCTCGCCCATCAGCACCGGCAG > 1:9133907/1‑35 AGCACTTCAAAACGCTCGCCCATCAGCACCGGCAG > 1:785301/1‑35 AGCACTTCAAAACGCTCGCCCATCAGCACCGGCAG > 1:8150555/1‑35 GCACTTCAAAACGCTCGCCCATCAGCACCGGCAGG > 1:2959269/1‑35 GCACTTCAAAACGCTCGCCCATCAGCACCGGCAGG > 1:9850772/1‑35 ACTTCAAAACGCTCGCCCATCAGCACCGGCAGGGG > 1:14313660/1‑35 ACTTCAAAACGCTCGCCCATCAGCACCGGCAGGGG > 1:14412090/1‑35 ACTTCAAAACGCTCGCCCATCAGCACCGGCAGGGG > 1:18493458/1‑35 CTTCAAAACGCTCGCCCATCAGCACCGGCAGGGGG > 1:9861377/1‑35 CTTCAAAACGCTCGCCCATCAGCACCGGCAGGGGG > 1:4503250/1‑35 CTTCAAAACGCTCGCCCATCAGCACCGGCAGGGGG > 1:20161530/1‑35 TTCAAAACGCTCGCCCATCAGCACCGGCAGGGGGG > 1:18930136/1‑35 TTCAAAACGCTCGCCCATCAGCACCGGCAGGGGGG > 1:10223976/1‑35 TCAAAACGCTCGCCCATCAGCACCGGCAGGGGGcg > 1:3262231/1‑33 TCAAAACGCTCGCCCATCAGCACCGGCAGGGGGGG > 1:5490678/1‑35 AAAACGCTCGCCCATCAGCACCGGCAGGGGGGctg > 1:20277772/1‑32 AAAACGCTCGCCCATCAGCACCGGCAGGGGGGGgg > 1:2862721/1‑33 AAAACGCTCGCCCATCAGCACCGGCAGGGGGGGgg > 1:12848895/1‑33 AAAACGCTCGCCCATCAGCACCGGCAGGGGGGGCa > 1:3211972/1‑34 AAAACGCTCGCCCATCAGCACCGGCAGGGGGGGCG > 1:2646995/1‑35 AAAACGCTCGCCCATCAGCACCGGCAGGGGGCGCG > 1:6676112/1‑35 AAACGCTCGCCCATCAGCACCGGCAGGGGGGGGGC > 1:10630125/1‑35 AAACGCTCGCCCATCAGCACCGGCAGGGGGGGCGC > 1:6584695/1‑35 AACGCTCGCCCATCAGCACCGGCAGGGGGGGGGCg > 1:2353287/1‑34 CGCTCGCCCATCAGCACCGGCAGGGGGGGCGCctg > 1:10197234/1‑32 CCACCAGCACTTCAAAACGCTCGCCCATCAGCACCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/140741‑140702 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcagGGGGGGCGCTTT > REL606/1349560‑1349571 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |