Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL606554,5310T→G100.0% 0.2 2S897R (AGT→AGGECB_00512putative tail component of prophage
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (2/0):  ref base (0/0):  total (2/0)

ATACGGGTGTTATTGATATGCCTGCAGGCAGTGGTGTAATGACACT  >  REL606/554500‑554545
                               |              
ataCGGGTGTTATTGATATGCCTGCAGGCAggggg             >  1:14187413/1‑34 (MQ=0)
ataCGGGTGTTATTGATATGCCTGCAGGCAggggg             >  1:5374510/1‑34 (MQ=0)
ataCGGGTGTTATTGATATGCCTGCAGGCAggggg             >  1:573290/1‑34 (MQ=0)
ataCGGGTGTTATTGATATGCCTGCAGGCAggggg             >  1:7306992/1‑34 (MQ=0)
ataCGGGTGTTATTGATATGCCTGCAGGCAggggg             >  1:8770205/1‑34 (MQ=0)
  aCGGGTGTTATTGATATGCCTGCAGGCAggggggg           >  1:13154887/1‑32 (MQ=1)
     ggTGTTATTGATATGCCTGCAGGCAGGGGGGTGAt        >  1:12285626/1‑35 (MQ=1)
           aTTGATATGCCTGCAGGCAGGGGGGTAATGaaacc  >  1:4715213/1‑34 (MQ=1)
           aTTGATATGCCTGCAGGCAGGGGGGGCATGACCCt  >  1:10461217/1‑35 (MQ=0)
                               |              
ATACGGGTGTTATTGATATGCCTGCAGGCAGTGGTGTAATGACACT  >  REL606/554500‑554545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.