New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1539621 = | 78 (0.760) | 10 (0.120) | 3/38 | NT | 16.0% | coding (51/2400 nt) | dos | cAMP phosphodiesterase, heme‑regulated |
? | REL606 | = 4445223 | 43 (0.530) | coding (715/2139 nt) | nrdD | anaerobic ribonucleoside triphosphate reductase |
Only 100 of 119 total aligned reads displayed.
CACTCTTCTGCGGTCTTGCGATGTTTGTTGTAGCTGGCGGTAACAAACGGCGCCAGCACTTCATCGATA > REL606/4445189‑4445257 | cACTCTTCTGCGGTCTTGCGATGTTTGTTGTAGCt < 1:7994829/35‑1 (MQ=255) cACTCTTCTGCGGTCTTGCGATGTTTGTTGTAGCt > 1:7797845/1‑35 (MQ=255) cACTCTTCTGCGGTCTTGCGATGTTTGTTGTAGCt > 1:19100145/1‑35 (MQ=255) cACTCTTCTGAGGTCTTGCGATGTTTGTTGTAGCt < 1:5572592/35‑1 (MQ=255) aCTCTTCTGCTGTCTTGCGATGTTTGTTGTAGCTg < 1:19110677‑M2/35‑2 (MQ=255) aCTCTTCTGCGGTCTTGCGATGTTTGTTGTAGCTg > 1:19559771‑M2/1‑34 (MQ=255) aCTCTTCTGCGGTCTTGCGATGTTTGTTGTAGCTg < 1:3954295‑M2/35‑2 (MQ=255) aCTCTTCTGCGGTCTTGCGATGTTTGTTGTAGCTg > 1:15745285‑M2/1‑34 (MQ=255) aCTCTTCTGCGGTCTTGCGATGTTTGTTGTAGCTg > 1:7108504‑M2/1‑34 (MQ=255) ctctTCTGCGGTCTTGCGATGTTTGTTGTAGCTgg > 1:17944585‑M2/1‑33 (MQ=255) ctctTCTGCGGTCTTGCGATGTTTGTTGTAGCTgg > 1:12931509‑M2/1‑33 (MQ=255) ctctTCTGCGGTCTTGCGATGTTTGTTGTAGCTgg > 1:17953339‑M2/1‑33 (MQ=255) ctctTCTGCGGTCTTGCGATGTTTGTTGTAGCTgg > 1:17013775‑M2/1‑33 (MQ=255) ctctTCTGCGGTCTTGCGATGTTTGTTGTAGCAgg > 1:6492547/1‑35 (MQ=255) tcttctGCGTTCTTGCGATGTTTGTTGTAGCTggc < 1:14425745‑M2/35‑4 (MQ=255) tcttctGCGGTCTTGCGATGTTTGTTGTAGCTggc < 1:15230261‑M2/35‑4 (MQ=255) tcttctGCGGTCTTGCGATGTTTGTTGTAGCTggc > 1:8691362‑M2/1‑32 (MQ=255) cttctGCGGTCTTGCGATGTTTGTTGTAGCTggcg > 1:17884797‑M2/1‑31 (MQ=255) cttctGCGGTCTTGCGATGTTTGTTGTAGCTggcg > 1:16838807‑M2/1‑31 (MQ=255) cttctGCGGTCTTGCGATGTTTGTTGTAGCTggcg > 1:3948362‑M2/1‑31 (MQ=255) ttctGCGGTCTTGCGATGTTTGTTGTAGTTGGGgg > 1:14316959/1‑35 (MQ=38) ttctGCGGTCTTGCGATGTTTGTTGTAGCTggcgg > 1:13077347‑M2/1‑30 (MQ=255) ttctGCGGTCTTGCGATGTTTGTTGTAGCTggcgg > 1:7213603‑M2/1‑30 (MQ=255) tctGCGGTCTTGCGATGTTTGTTGTAGCTgggggg < 1:8239174‑M2/35‑7 (MQ=255) tctGCGGTCTTGCGATGTTTGTTGTAGCTggcggg < 1:16198704‑M2/35‑7 (MQ=255) tctGCGGTCTTGCGATGTTTGTTGTAGCTGGCGGt < 1:2630401/35‑1 (MQ=255) ctGCGGTCTTGCGATGTTTGTTGTAGCTggggggg < 1:11706906‑M2/35‑8 (MQ=255) ctGCGGTCTTGCGATGTTTGTTGTAGCTGGCGGTa < 1:2653147/35‑1 (MQ=255) ctGCGGTCTTGCGATGTTTGTTGTAGCTGGCGGTa < 1:6058165/35‑1 (MQ=255) ctGCGGTCTTGCGATGTTTGTTGTAGCTGGCGGTa < 1:7247359/35‑1 (MQ=255) tGCGGTCTTGCGATGTTTGTTGTAGCTggcgggga < 1:20335024‑M2/35‑9 (MQ=255) tGCGGTCTTGCGATGTTTGTTGTAGCTGGCGGTaa < 1:19542234/35‑1 (MQ=255) tGCGGTCTTGCGATGTTTGTTGTAGATGGCGGTaa < 1:10035865/35‑1 (MQ=255) gCGGTCTTGCGATGTTTGTTGTAGCTGGCGGTAAc < 1:20020830/35‑1 (MQ=255) gCGGTCTTGCGATGTTTGTTGTAGCTGGCGGTAAc < 1:20550616/35‑1 (MQ=255) gCGGTCTTGCGATGTTTGTTGTAGCTGGCGGTAAc < 1:11566729/35‑1 (MQ=255) cGGTCTTGCGATGTTTGTTGTAGCTggcggggaaa < 1:19161025‑M2/35‑11 (MQ=255) cGGTCTTGCGATGTTTGTTGTAGCTggcggggaaa < 1:3719947‑M2/35‑11 (MQ=255) cGGTCTTGCGATGTTTGTTGTAGCTGGCGGTAACa < 1:10950334/35‑1 (MQ=255) cGGTCTTGCGATGTTTGTTGTAGCTGGCGGTAACa < 1:19099510/35‑1 (MQ=255) cGGTCTTGCGATGTTTGTTGTAGCTGGCGGTAACa < 1:5757217/35‑1 (MQ=255) ggTCTTGCGATGTTTGTTGTAGCTggcggggaaca < 1:1219349‑M2/35‑12 (MQ=255) ggTCTTGCGATGTTTGTTGTAGCTggcggggaaaa < 1:410494‑M2/35‑12 (MQ=255) ggTCTTGCGATGTTTGTTGTAGCTggcggggaaaa < 1:6266175‑M2/35‑12 (MQ=255) ggTCTTGCGATGTTTGTTGTAGCTggcggggaaaa < 1:9391261‑M2/35‑12 (MQ=255) ggTCTTGCGATGTTTGTTGTAGCTGGCNGTAACaa < 1:16255715/35‑1 (MQ=255) ggTCTTGCGATGTTTGTTGTAGCTGGCGGTAACaa < 1:18654037/35‑1 (MQ=255) ggTCTTGCGATGTTTGTTGTAGCTGGCGGTAACaa < 1:18941488/35‑1 (MQ=255) ggTCTTGCGATGTTTGTTGTAGCTGGCGGTAACaa < 1:12936204/35‑1 (MQ=255) ggTCTTGCGATGTTTGTTGTAGCTGGCGGTAACaa < 1:6600020/35‑1 (MQ=255) ggTCTTGCGATGTTTGTTGTAGCTGGCGGTAACaa < 1:10440736/35‑1 (MQ=255) gTCTTGCGATGTTTGTTGTAGCTGGCGGTAACaaa < 1:6280944/35‑1 (MQ=255) tCTTGGGATGTTTGTTGTAGCTGGCGGTAACAAAc < 1:1646503/35‑1 (MQ=255) tCTTGCGATGTTTGTTGTAGCTggcggggaaaaaa < 1:2796183‑M2/35‑14 (MQ=255) tCTTGCGATGTTTGTTGTAGCTGGCGGTAACAAAc < 1:1745955/35‑1 (MQ=255) tCTTGCGATGTTTGTTGTAGCTGGCGGTAACAAAc < 1:4333926/35‑1 (MQ=255) tCTTGCGATGTTTGTTGTAGCTGGCGGTAACAAAc < 1:4859516/35‑1 (MQ=255) cTTGCGATGTTTGTTGTAGCTggcgggggaaaaag < 1:10754952‑M2/35‑15 (MQ=255) cTTGCGATGTTTGTTGTAGCTggcggggaaaaaaa < 1:2843361‑M2/35‑15 (MQ=255) cTTGCGATGTTTGTTGTAGCTGGCGGTAACAAACg < 1:4535273/35‑1 (MQ=255) cTTGCGATGTTTGTTGTAGCTGGCGGTAACAAACg < 1:11326649/35‑1 (MQ=255) ttGCGATGTTTGTTGTAGCTggcggggaaaaaaag < 1:9286767‑M2/35‑16 (MQ=255) ttGCGATGTTTGTTGTAGCTggcggggaaaaaaag < 1:17465494‑M2/35‑16 (MQ=255) ttGCGATGTTTGTTGTAGCTggcggggaaaaaaac < 1:10951186‑M2/35‑16 (MQ=255) ttGCGATGTTTGTTGTAGCTGGCTGGGACAAACgg > 1:5700779/1‑35 (MQ=25) tGCGATGTTTGTTGTAGCTggcggggaaaaaaagg < 1:14322535‑M2/35‑17 (MQ=255) gCGATGTTTGTTGTAGCTGGCGGTAACAAACGgcg < 1:13384933/35‑1 (MQ=255) cGATTTTTGTTGTAGCTGACGGTAACAAACGgcgc < 1:16398755/35‑1 (MQ=25) gATGTTTGTTGTAGCTGGCGGTAACAAACGGCGcc < 1:436127/35‑1 (MQ=255) tttttgttGTAGCTGGCGGTAACAAACGGCGCCAg < 1:9127831/33‑1 (MQ=255) tgtttgttGTAGCTGGCGGTAACAAACGGCGCCAg < 1:16368360/35‑1 (MQ=255) gtttgttGTAGCTGGCGGTAACAAACGGCGCCAGc < 1:14065253/35‑1 (MQ=255) tttgttGTAGCTGGCGGTAACAAACGGCGCCAGCa < 1:1863540/35‑1 (MQ=255) ttgttgTAGCTGGCGGTAACAAACGGCGCCAGCAc < 1:7222655/35‑1 (MQ=255) tgttgtAGCTGGCGGTAACAAACGGCGCCAGCACt < 1:14469794/35‑1 (MQ=255) tgttgtAGCTGGCGGTAACAAACGGCGCCAGCACt < 1:6489262/35‑1 (MQ=255) gttgtAGCTGGCGGTAACAAACGGCGCCAGCACtt < 1:5143192/35‑1 (MQ=255) gttgtAGCTGGCGGTAACAAACGGCGCCAGCACtt < 1:2050215/35‑1 (MQ=255) gttgtAGCTGGCGGTAACAAACGGCGCCAGCACtt < 1:20492367/35‑1 (MQ=255) ttgtAGCTGGCGGTAACAAACGGCGCCAGCACTTc < 1:14813430/35‑1 (MQ=255) ttgtAGCTGGCGGTAACAAACGGCGCCAGCACTTc < 1:3025030/35‑1 (MQ=255) ttgtACCTGGCGGTAACAAACGGCGCCAGCACTTc < 1:17326703/35‑1 (MQ=255) tgtAGCTGGCGGTAACAAACGGCGCCAGCACTTCa < 1:7268088/35‑1 (MQ=255) tgtAGCTGGCGGTAACAAACGGCGCCAGCACTTCa < 1:847593/35‑1 (MQ=255) gtAGCTGGCGGTAACAAACGGCGCCAGCACTTCAt < 1:649927/35‑1 (MQ=255) gtAGCTGGCGGTAACAAACGGCGCCAGCACTTCAt < 1:4127047/35‑1 (MQ=255) gtAGCTGGCGGTAACAAACGGCGCCAGCACTTCAt < 1:14416432/35‑1 (MQ=255) gtAGCTGGCGGTAACAAACGGCGCCAGCACTTCAt < 1:10823874/35‑1 (MQ=255) tAGCTGGCGGTAACAAACGGCTCCAGCACTTCATc < 1:1131271/35‑1 (MQ=255) tAGCTGGCGGTAACAAACGGCGCCAGCACTTCATc < 1:9643496/35‑1 (MQ=255) tAGCTGGCGGTAACAAACGGCGCCAGCACTTCATc < 1:15643276/35‑1 (MQ=255) tAGCTGGCGGTAACAAACGGCGCCAGCACTTCATc < 1:13392202/35‑1 (MQ=255) aGCTGGCGGTAACAAACGGCGCCAGCACTTCATCg < 1:17775284/35‑1 (MQ=255) aGCTGGCGGTAACAAACGGCGCCAGCACTTCATCg < 1:5030068/35‑1 (MQ=255) aGCTGGCGGTAACAAACGGCGCCAGCACTTCATCg < 1:15234611/35‑1 (MQ=255) gCTGGAGGTAACAAACGGCGCCAGCACTTCATCGa < 1:7780492/35‑1 (MQ=255) gCTGGAGGTAACAAACGGCGCCAGCACTTCATCGa < 1:17092206/35‑1 (MQ=255) cTGGCGGTAACAAACGGCGCCAGCACTTCATCGAt < 1:3087133/35‑1 (MQ=255) tGGCGGTAACAAACGGCGCCAGCACTTCATCGATa < 1:16867341/35‑1 (MQ=255) tGGCGGTAACAAACGGCGCCAGCACTTCATCGATa < 1:19599076/35‑1 (MQ=255) | CACTCTTCTGCGGTCTTGCGATGTTTGTTGTAGCTGGCGGTAACAAACGGCGCCAGCACTTCATCGATA > REL606/4445189‑4445257 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |