New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3320231 | NA (NA) | 11 (0.180) | 3/28 | NT | 25.5% | intergenic (‑312/+118) | tldD/yhdP | predicted peptidase/conserved membrane protein, predicted transporter |
? | REL606 | = 3686161 | 55 (0.540) | coding (401/741 nt) | yiaT | hypothetical protein |
Only 100 of 441 total aligned reads displayed.
TGGAATACCGATAGCTCCCCCACCCAGCCGTTGCTGTTATCCAGAACGTCCGCAGCCGCAGAGGCTTT > REL606/3686128‑3686195 | aTACCGATAGCTCCCCCACCCAGCCGTTGCTGTTa > 1:11899864/1‑35 (MQ=255) tACCGATAGCTCCCCCACCCAGCCGTTGCTGTTAt > 1:10428884/1‑35 (MQ=255) aCCGATAGCTCCCCCACCCAGCCGTTGCTGTTATc > 1:4015937/1‑35 (MQ=255) cGATAGCCCCCCCCCCCAGCCGTTGCTGTTATCCa < 1:19965424/35‑1 (MQ=25) cGATAGCCCCCCCCCCCAGCCGTTGCTGTTATCCa < 1:7359730/35‑1 (MQ=25) gATAGCTCCCCCACCCAGCCGTTGCTGTTATCCAg > 1:349134/1‑35 (MQ=255) aTAGCCCCCCCCCCCAGCCGTTGCTGTTATCCAGa < 1:6408385/35‑1 (MQ=25) tAGCTCCCCCACCCAGCCGTTGCTGTTATCCAGaa > 1:14222753/1‑35 (MQ=255) tAGCTCCCCCACCCAGCCGTTGCTGTTATCCAGaa > 1:2573127/1‑35 (MQ=255) gCTCCCCCCCCCAGCCGTTGCTGTTATCCAGAACg < 1:6835682/35‑1 (MQ=255) gCTCCCCCCCCCAGCCGTTGCTGTTATCCAGAACg < 1:12249796/35‑1 (MQ=255) cccccccCCCAGCCGTTGCctgatgcgacgcgtaa > 1:19169819‑M2/2‑19 (MQ=255) cccccccCCCAGCCGTTGCctgatgcgacgcgtaa > 1:18260981‑M2/2‑19 (MQ=255) cccccccCCCAGCCGTTGCctgatgcgacgcgtaa > 1:12051679‑M2/2‑19 (MQ=255) cccccccCCCAGCCGTTGCctgatgcgacgcgtaa > 1:12119399‑M2/2‑19 (MQ=255) cccccCCCCAGCCGTTGCctgatgcgacgcgtaat > 1:13845880‑M2/1‑18 (MQ=255) cccccCCCCAGCCGTTGCctgatgcgacgcgtaat > 1:1003579‑M2/1‑18 (MQ=255) ccccCCCCAGCCGTTGCctgatgcgacgcgtaatg > 1:17035659‑M2/1‑17 (MQ=255) ccccCCCCAGCCGTTGCctgatgcgacgcgtaatg > 1:18881135‑M2/1‑17 (MQ=255) cccccccaGCCGTTGCctgatgcgacgctgtgcgt > 1:16414833‑M2/1‑16 (MQ=255) cccccccaGCCGTTGCctgatgcgacgcgtaatgc > 1:18118968‑M2/1‑16 (MQ=255) cccccccaGCCGTTGCctgatgcgacgcgtaatgc > 1:14693484‑M2/1‑16 (MQ=255) cccccccaGCCGTTGCctgatgcgacgcgtaatgc > 1:4892767‑M2/1‑16 (MQ=255) cccccccaGCCGTTGCctgatgcgacgcgtaatgc > 1:1520610‑M2/1‑16 (MQ=255) ccccccaGCCGTTGCctgatgcgacgcgtaatgcg > 1:1623568‑M2/1‑15 (MQ=255) cccccagcCGTTGCctgatgcgacgcgtaatgcgt > 1:6955427‑M2/3‑14 (MQ=255) cccccagcCGTTGCctgatgcgacgcgtaatgcgt > 1:13294247‑M2/3‑14 (MQ=255) cccccagcCGTTGCctgatgcgacgcgtaatgcgt > 1:11006735‑M2/3‑14 (MQ=255) ccccagCCGTTGCctgatgcgacgcgtaatgcgtc > 1:3352112‑M2/2‑13 (MQ=255) ccccagCCGTTGCctgatgcgacgcgtaatgcgtc > 1:575924‑M2/2‑13 (MQ=255) gccagCCGTTGCctgatgcgacgctgtgcgtctta > 1:1456709‑M2/2‑12 (MQ=255) gccagCCGTGGCctgatgcgacgctgtgcgtctta > 1:7605133‑M2/2‑12 (MQ=255) cccaGCCGTTGCctgatgcgacgcgtaatgcgtct > 1:15600769‑M2/1‑12 (MQ=255) cccaGCCGTTGCctgatgcgacgcgtaatgcgtct > 1:8022352‑M2/1‑12 (MQ=255) ccaGCCGTTGCctgatgcgacgctgtgcgtcttat > 1:2405370‑M2/1‑11 (MQ=255) ccaGCCGTTGCctgatgcgacgcgtaatgcgtctt > 1:17345753‑M2/1‑11 (MQ=255) caGCCGTTGCctgatgcgacgctgtgcgtcttatc > 1:18981135‑M2/1‑10 (MQ=255) caGCCGTTGCctgatgcgacgctgtgcgtcttatc < 1:16696645‑M2/35‑26 (MQ=255) aGCCGTTGCctgatgcgacgctgtgcgtcttatca < 1:15961213‑M2/35‑27 (MQ=255) aGCCGTTGCctgatgcgacgctgtgcgtcttatca < 1:9123500‑M2/35‑27 (MQ=255) aGCCGTTGCctgatgcgacgcgtaatgcgtcttat < 1:445628‑M2/35‑27 (MQ=255) aGCCGTTGCctgatgcgacgcgtaatgcgtcttat < 1:5421568‑M2/35‑27 (MQ=255) aGCCGTTGCctgatgcgacgcgtaatgcgtcttat < 1:13479481‑M2/35‑27 (MQ=255) gCCGTTGCctgatgcgacgctgtgcgtcttatcag > 1:15337758‑M2/1‑8 (MQ=255) gCCGTTGCctgatgcgacgctgtgcgtcttatcag > 1:1372887‑M2/1‑8 (MQ=255) gCCGTTGCctgatgcgacgctgtgcgtcttatcag > 1:11381129‑M2/1‑8 (MQ=255) gCCGTTGCctgatgcgacgcgtaatgcgtcttttc < 1:273817‑M2/35‑28 (MQ=255) gCCGTTGCctgatgcgacgcgtaatgcgtcttatc < 1:8221403‑M2/35‑28 (MQ=255) gCCGTTGCctgatgcgacgcgtaatgcgtcttatc > 1:845169‑M2/1‑8 (MQ=255) gCCGTTGCctgatgcgacgcgtaatgcggcttatc < 1:8829210‑M2/35‑28 (MQ=255) gCCGTTGActgatgcgacgctgtgcgtcttatcag > 1:18050283‑M2/1‑8 (MQ=255) ccGTTGCctgatgcgacgctgtgcgtcttatcagg < 1:9722182‑M2/35‑29 (MQ=255) ccGTTGCctgatgcgacgctgtgcgtcttatcagg > 1:4525432‑M2/1‑7 (MQ=255) ccGTTGCctgatgcgacgctgtgcgtcttatcagg < 1:1149429‑M2/35‑29 (MQ=255) ccGTTGCctgatgcgacgctgtgcgtcttatcagg < 1:12533080‑M2/35‑29 (MQ=255) ccGTTGCctgatgcgacgcgtaatgcgtcttatca < 1:1056423‑M2/35‑29 (MQ=255) ccGTTGCctgatgcgacgcgtaatgcgtcttatca > 1:17818305‑M2/1‑7 (MQ=255) ccGTTGCctgatgcgacgcgtaatgcgtcttatca < 1:1274857‑M2/35‑29 (MQ=255) ccGTTGCctgatgcgacgcgtaatgcgtattatca > 1:16563682‑M2/1‑7 (MQ=255) cGTTGCctgatgcgacgctgtgcgtcttatcaggc > 1:10250004‑M2/1‑6 (MQ=255) cGTTGCctgatgcgacgctgtgcgtcttatcaggc < 1:10319906‑M2/35‑30 (MQ=255) cGTTGCctgatgcgacgcgtaatgcgtcttatcag > 1:15820756‑M2/1‑6 (MQ=255) cGTTGCctgatgcgacgcgtaatgagtcttatcag > 1:17997388‑M2/1‑6 (MQ=255) gTTGCctgatgcgacgctgtgcgtcttatcaggcc < 1:6545229‑M2/35‑31 (MQ=255) gTTGCctgatgcgacgcgtaatgcgtcttatcagg < 1:10070518‑M2/35‑31 (MQ=255) gTTGCctgatgcgacgcgtaatgcgtcttatcagg > 1:11657467‑M2/1‑5 (MQ=255) gTTGCctgatgcgacgcgtaatgcgtcttatcagg < 1:6737280‑M2/35‑31 (MQ=255) gTTGCctgatgcgacgcgtaatgcgtcttatcagg < 1:14472761‑M2/35‑31 (MQ=255) ttGCctgatgcggcgctgtgcgtcttatcaggcct > 1:520958‑M2/1‑4 (MQ=255) ttGCctgatgcgacgctgtgcgtcttatcaggcct > 1:17556986‑M2/1‑4 (MQ=255) ttGCctgatgcgacgctgtgcgtcttatcaggcct > 1:4318302‑M2/1‑4 (MQ=255) ttGCctgatgcgacgctgtgcgtcttatcaggcct > 1:16498386‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc > 1:9384337‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc > 1:14789082‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc < 1:20192809‑M2/35‑32 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc > 1:10779152‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc > 1:20430051‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc > 1:6081075‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc > 1:2850711‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc > 1:2163620‑M2/1‑4 (MQ=255) ttGCctgatgcgacgcgtaatgcgtcttatcaggc < 1:7231305‑M2/35‑32 (MQ=255) tGCctgattcgacgcgtaatgcgtcttatcaggcc < 1:5962873‑M2/35‑33 (MQ=255) tGCctgatgcgacgctgtgcgtcttatcaggccta < 1:958612‑M2/35‑33 (MQ=255) tGCctgatgcgacgctgtgcgtcttatcaggccta < 1:19523867‑M2/35‑33 (MQ=255) tGCctgatgcgacgctgtgcgtcttatcaggccta < 1:19820968‑M2/35‑33 (MQ=255) tGCctgatgcgacgctgtgcgtcttatcaggccta < 1:1302286‑M2/35‑33 (MQ=255) tGCctgatgcgacgcgtaatgcgtcttatcaggcc < 1:11833382‑M2/35‑33 (MQ=255) tGCctgatgcgacgcgtaatgcgtcttatcaggcc > 1:5636643‑M2/1‑3 (MQ=255) tGCctgatgcgacgcgtaatgcgtcttatcaggcc < 1:14932826‑M2/35‑33 (MQ=255) tGCctgatgcgacgcgtaatgcgtcttatcaggcc > 1:3210125‑M2/1‑3 (MQ=255) tGCctgatgcgacgcgtaatgcgtcttatcaggcc > 1:16134293‑M2/1‑3 (MQ=255) gCctgatgcgacgctgtgcgtcttatcaggcctac < 1:7177197‑M2/35‑34 (MQ=255) gCctgatgcgacgctgtgcgtcttatcaggcctac > 1:3816026‑M2/1‑2 (MQ=255) gCctgatgcgacgctgtgcgtcttatcaggcctac < 1:18607350‑M2/35‑34 (MQ=255) gCatgatgcgacgctgtgcgtcttatcaggcctac > 1:14021672‑M2/1‑2 (MQ=255) cctgatgcgacgctgtgcgtcttatcaggcctaca < 1:16856383‑M2/35‑35 (MQ=255) cctgatgcgacgctgtgcgtcttatcaggcctaca < 1:742724‑M2/35‑35 (MQ=255) cctgatgcgacgctgtgcgtcttatcaggcctaca < 1:3034122‑M2/35‑35 (MQ=255) cctgatgcgacgcgtaatgcgtcttatcaggccta < 1:20594243‑M2/35‑35 (MQ=255) cctgatgcgacgcgtaatgcgtcttatcaggccta < 1:8544162‑M2/35‑35 (MQ=255) | TGGAATACCGATAGCTCCCCCACCCAGCCGTTGCTGTTATCCAGAACGTCCGCAGCCGCAGAGGCTTT > REL606/3686128‑3686195 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |