New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 4187069 | 83 (0.810) | 13 (0.170) | 5/36 | NT | 15.8% | coding (49/1590 nt) | purH | bifunctionalphosphoribosylaminoimidazolecarboxam ide formyltransferase/IMP cyclohydrolase |
? | REL606 | = 4402608 | 76 (0.990) | intergenic (+67/+62) | sgaE/yjfY | L‑ribulose 5‑phosphate 4‑epimerase/hypothetical protein |
Only 100 of 177 total aligned reads displayed.
GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGA > REL606/4187035‑4187103 | gAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT > 1:17392109‑M1/1‑35 (MQ=255) gAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT > 1:18386881‑M1/1‑35 (MQ=255) gAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT < 1:7870730‑M1/35‑1 (MQ=255) gAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT > 1:6435753‑M1/1‑35 (MQ=255) gAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT > 1:6414047‑M1/1‑35 (MQ=255) aaaGTGCCTGGGCGAATTCGACGATACCGGCTTTt > 1:5751959‑M1/1‑34 (MQ=255) aaaGTGCCTGGGCGAATTCGACGATACCGGCTTTg < 1:1099466/35‑1 (MQ=255) aaaGTGCCTGGGCGAATTCGACGATACCGGCTTTg < 1:11618127/35‑1 (MQ=255) aaGTGCCTGGGCGAATTCGACGATACCGGCTTTtt > 1:15855480‑M1/1‑33 (MQ=255) aaGTGCCTGGGCGAATTCGACGATACCGGCTTTtt > 1:19663981‑M1/1‑33 (MQ=255) aaGTGCCTGGGCGAATTCGACGATACCGGCTTTGt < 1:7097568/35‑1 (MQ=255) aaGTGCCTGGGCGAATTCGACGATACCGGCTTTGt < 1:12587766/35‑1 (MQ=255) aaGTGCCTGGGCGAATTCGACGATACCGGCTTTGt < 1:1249391/35‑1 (MQ=255) aGTGCCTGGGCGAATTCGACGATACCGGCTTTttt > 1:6489228‑M1/1‑32 (MQ=255) aGTGCCTGGGCGAATTCGACGATACCGGCTTTGTc < 1:13090764/35‑1 (MQ=255) aGTGCCTGGGCGAATTCGACGATACCGGCTTTGTc < 1:2425446/35‑1 (MQ=255) tGCCTGGGCGAATTCGACGATACCGGCTTTGTCAg < 1:3956171/35‑1 (MQ=255) tGCCTGGGCGAATTCGACGATACCGGCTTTGTCAg < 1:15156657/35‑1 (MQ=255) tGCCTGGGCGAATTCGACGATACCGGCTTTGTCAg < 1:15074053/35‑1 (MQ=255) tGCCTGGGCGAATTCGACGATACCGGCTTTGTCAg < 1:9500293/35‑1 (MQ=255) tGCCTGGGCGAATTCGACGATACCGGCTTTGTCAg < 1:20311810/35‑1 (MQ=255) tGCCTGGGCGAATTCGACGATACAGGCTTTtttta > 1:3426095‑M1/1‑30 (MQ=255) gCCTGGGCGAATTCGACGATACCGGCTTTtttaca > 1:7788883‑M1/1‑29 (MQ=255) gCCTGGGCGAATTCGACGATACCGGCTTTGTCAGa < 1:6751291/35‑1 (MQ=255) ccTGGGCGAATTCGACGATACCGGCTTTtttagaa > 1:6114756‑M1/1‑28 (MQ=255) ccTGGGCGAATTCGACGATACCGGCTTTGTAAGaa < 1:14683196/35‑1 (MQ=255) cTGGGCGAATTCGACGATACCGGCTTTttttgaaa > 1:12905056‑M1/1‑27 (MQ=255) cTGGGCGAATTCGACGATACCGGCTTTGTCAGaaa < 1:8764839/35‑1 (MQ=255) tGGGCGAATTCGACGATACCGGCTTTtttagaaac > 1:13407386‑M1/1‑26 (MQ=255) tGGGCGAATTCGACGATACCGGATTTGTCAGAAac < 1:17100617/35‑1 (MQ=255) tGGGCAAATTCGGCGATACCGGCTTTGTCAGAAac < 1:1946828/35‑1 (MQ=25) gggCGAATTCGACGATACCGGCTTTGTCAGAAaca < 1:737939/35‑1 (MQ=255) gggCGAATTCGACGATACCGGCTTTGTCAGAAaca < 1:16123721/35‑1 (MQ=255) ggCGAATTCGACGATACCGGCTTTtttcgaaaaaa > 1:10131480‑M1/1‑24 (MQ=255) ggCGAATTCGACGATACCGGCTTTtttagaaaaaa > 1:19478113‑M1/1‑24 (MQ=255) ggCGAATTCGACGATACCGGCTTTGTCAGAAacac < 1:6810485/35‑1 (MQ=255) gCGAATTCGACGATACCGGCTTTTTCAGAAacaat > 1:20337871/1‑33 (MQ=37) gCGAATTCGACGATACCGGCTTTGTCAGAAACACt < 1:7527645/35‑1 (MQ=255) gCGAATTCGACGATACCGGCTTTGTCAGAAACACt < 1:19109260/35‑1 (MQ=255) cGAATTCGACGATACCGGCTTTGTCAGAAACACTg < 1:7518215/35‑1 (MQ=255) cGAATTCGAAGATACCGGCTTTGTCAGAAACACTg < 1:81945/35‑1 (MQ=255) gAATTCGACGATACCGGCTTTttttgaaaaactga > 1:20597282‑M1/1‑21 (MQ=255) gAATTCGACGATACCGGCTTTttttgaaaaactca > 1:17985605‑M1/1‑21 (MQ=255) gAATTCGACGATACCGGCTTTGTCAGAAACACTGa < 1:17102882/35‑1 (MQ=255) gAATTCGACGATACCGGCTTTGTCAGAAACACTGa < 1:10097483/35‑1 (MQ=255) aTTCGACGATACCGGCTTTGTCAGAAACACTGAGc < 1:3648979/35‑1 (MQ=255) ttCGACGATACCGGCTTTTTTCGAAAAACCGAGCa > 1:14377118/1‑35 (MQ=12) tagacgaTACCGGCTTTGTCAGAAACACTGAGCag < 1:15705983/33‑1 (MQ=255) tCGACGATACCGGCTTTGTCAGAAACACTGAGCag < 1:7586567/35‑1 (MQ=255) cgacgaTGCCTGCTTTGTCAGAAACACTGAGCaga < 1:8550087/35‑1 (MQ=37) cgacgaTACCGGCTTTGTCAGAAACACTGAGCaga < 1:4857222/35‑1 (MQ=255) cgacgaTACCGGCTTTGTCAGAAACACTGAGCaga < 1:8674775/35‑1 (MQ=255) cgacgaTACCGGCTTTGTCAGAAACACTGAGCaga < 1:17745700/35‑1 (MQ=255) cgacgaTACCGGCTTTGTCAGAAACACTGAGCaga < 1:18999515/35‑1 (MQ=255) acgaTACCGGCTTTGTCAGAAACACTGAGCAGAgc < 1:11278213/35‑1 (MQ=255) acgaTACCGGCTTTGTCAGAAACACTGAGCAGAgc < 1:3077700/35‑1 (MQ=255) acgaTACCGGCTTTGTCAGAAACACTGAGCAGAgc < 1:12177338/35‑1 (MQ=255) acgaTACCGGCTTTGTCAGAAACACTGAGCAGAgc < 1:14017179/35‑1 (MQ=255) cnaNACCGGCTTTGTCAGAAACACTGAGCAGAgcn < 1:16383052/35‑1 (MQ=255) cgaTACCGTCTTTGTCAGAAACACTGAGCAGAgct > 1:11291394/1‑34 (MQ=255) gaTACCGGCTTTGTCAGAAACACTGAGCAGAgcgc < 1:12091985/35‑1 (MQ=255) gaTACCGGCTTTGTCAGAAACACTGAGCAGAgcgc < 1:10683611/35‑1 (MQ=255) gaTACCGGCTTTGTCAGAAACACTGAGCAGAgcgc < 1:14244416/35‑1 (MQ=255) aCCGGCTTTGTCAGAAACACTGAGCAGAGCgcggc < 1:12183083/35‑1 (MQ=255) aCCGGCTTTGTCAGAAACACTGAGCAGAGCgcggc < 1:490282/35‑1 (MQ=255) ccGGCTTTGTCAGAAACACTGAGCAGAGCgcggcg < 1:13487697/35‑1 (MQ=255) ccGGCTTTGTCAGAAACACTGAGCAGAGCgcggcg < 1:10754888/35‑1 (MQ=255) cGGCTTTGTCAGAAACACTGAGCAGAGCGcggcgg > 1:7619650/1‑35 (MQ=255) cGGCTTTGTCAGAAACACTGAGCAGAGCGcggcgg < 1:6540018/35‑1 (MQ=255) cGGCTTTGTCAGAAACACTGAGCAGAGCGcggcgg > 1:5623445/1‑35 (MQ=255) ggCTTTttttgaaaaacggctgcggaattagacca > 1:4648186‑M1/1‑6 (MQ=255) ggCTTTttttgaaaaacggctgcggaattagacca < 1:1924920‑M1/35‑30 (MQ=255) ggCTTTttttgaaaaacggccgcggaattagacca > 1:5410087‑M1/1‑6 (MQ=255) ggCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGa < 1:10838518/35‑1 (MQ=255) ggCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGa < 1:7672663/35‑1 (MQ=255) ggCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGa < 1:1661568/35‑1 (MQ=255) ggCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGa < 1:19333966/35‑1 (MQ=255) ggCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGa > 1:19824964/1‑35 (MQ=255) ggCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGa > 1:3499196/1‑35 (MQ=255) ggCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGa > 1:6052602/1‑35 (MQ=255) agCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGa < 1:15476068/34‑1 (MQ=255) gCTTTttttgaaaaacggctgcggaattagaccag < 1:5822437‑M1/35‑31 (MQ=255) gCTTTttttgaaaaacggctgcggaattagaccag < 1:19076849‑M1/35‑31 (MQ=255) gCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGAc < 1:19057479/35‑1 (MQ=255) cTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACt < 1:12323328/35‑1 (MQ=255) tttttttgaaaaacggctgcggaattagaccagtt < 1:14352927‑M1/35‑33 (MQ=255) tttttttgaaaaacggctgcggaattagaccagtt < 1:3237325‑M1/35‑33 (MQ=255) tttGTCAGAAACACTGAGCAGAGCGCGGCGGACTg > 1:415434/1‑35 (MQ=255) tttGTCAGAAACACTGAGCAGAGCGCGGCGGACTg > 1:15337492/1‑35 (MQ=255) tttGTCAGAAACACTGAGCAGAGCGCGGCGGACTg < 1:10801672/35‑1 (MQ=255) tttGTCAGAAACACTGAGCAGAGCGCGGCGGACTg < 1:9316604/35‑1 (MQ=255) ttttttgaaaaacggctgcggaattagaccagtta < 1:15890470‑M1/35‑34 (MQ=255) ttttttgaaaaacggctgcggaattagaccagtta < 1:18424991‑M1/35‑34 (MQ=255) ttGTCAGAAACACTGAGCAGAGCGCGGCGGACTgg < 1:13671688/35‑1 (MQ=255) ttGTCAGAAACACTGAGCAGAGCGCGGCGGACTgg < 1:11694696/35‑1 (MQ=255) tttttgaaaaacggctgcggaattagaccagttat > 1:10444375‑M1/1‑1 (MQ=255) tttttgaaaaacggctgcggaattagaccagttat < 1:9854235‑M1/35‑35 (MQ=255) tGTCAGAAACACTGAGCAGAGCGCGGCGGACTGga > 1:4574149/1‑35 (MQ=255) tGTCAGAAACACTGAGCAGAGCGCGGCGGACTGga < 1:13895122/35‑1 (MQ=255) tGTCAGAAACACTGAGCAGAGCGCGGCGGACTGga < 1:5457476/35‑1 (MQ=255) | GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTTGTCAGAAACACTGAGCAGAGCGCGGCGGACTGGA > REL606/4187035‑4187103 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |