New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1499429 | 88 (0.860) | 12 (0.150) | 6/38 | NT | 14.1% | coding (1346/2127 nt) | ECB_01413 | conserved hypothetical protein |
? | REL606 | 1692278 = | 76 (0.930) | coding (806/864 nt) | pdxY | pyridoxine kinase |
Only 100 of 175 total aligned reads displayed.
ATTGTGGACTTCCTCAACGGCGACCCGGACCAGCCGATTATTATGGGGCGTACCTACCACCATGAAAAC > REL606/1499395‑1499463 | atggtggacTTCCTCAACGGCGACCCGGACCAGCC < 1:13471007‑M1/32‑1 (MQ=255) aTTTTGGACTTCCTCAACGGCGACCCGGACCAGCC > 1:5164128‑M1/1‑35 (MQ=255) aTTGTGGACTTCCTCAACGGCGACCCGGACCAGCC > 1:7086389‑M1/1‑35 (MQ=255) ttGTGGACTTCCTCAACGGCGACCCGGACCACCCg > 1:18637158/1‑35 (MQ=255) tgtgGACTTCCTCAACGGCGACCCGGACCGGCCGa > 1:2861969/1‑35 (MQ=255) gtgGACTTCCTCAACGGCGACCCGGACCAGCCGat > 1:11880618/1‑35 (MQ=255) gtgGACTTCCTCAACGGCGACCCGGACCAGCCGat > 1:13919221/1‑35 (MQ=255) tgGACTTCCTCAACGGCGACCCGGACCTGCCGatt > 1:1653262/1‑35 (MQ=255) tgGACTTCCTCAACGGCGACCCGGACCAGCCGatt > 1:17658189/1‑35 (MQ=255) ggACTTCCTCAACGGCGACCCGGACCAGCCGatta > 1:16664529/1‑35 (MQ=255) gACTTCCTCAACGGCGACCCGGACCAGCCGattat > 1:11546883/1‑35 (MQ=255) ccTTCCCCAACGGCGCCCCGGCCCAGCCGattatt < 1:19445749/34‑1 (MQ=17) aCTTCCTCAACGGCGACCCGGACCAGCCGattatt > 1:14043069/1‑35 (MQ=255) aCTTCCTCAACGGCGACCCGGACCAGCCGattatt > 1:8043721/1‑35 (MQ=255) cTTCCTCAACGGCGACCCGGACCAGCCGAttatta > 1:17818485/1‑35 (MQ=255) ttCCTCAACGGCGACCCGGACCAGCCGATtattat > 1:11290461/1‑35 (MQ=255) tCCCCAACGGCGGCCCGGACCAGCCGATTATTATg < 1:15508860/35‑1 (MQ=17) ccTCAACGGCGACCCGGACCAGCCGATTATTATgg > 1:7735499/1‑35 (MQ=255) cTCAACGGCGACCCGGCCCAGCCGATTATTATggg < 1:20505582/35‑1 (MQ=255) cTCAACGGCGACCCGGACCAGACGATTATTATggg < 1:18255193/35‑1 (MQ=255) cagcGGCGACCCGGCCCAGCCGATTATTATGGGGc < 1:15719483/32‑1 (MQ=17) aaCGGCGACCCGGACCAGCCGATTATTATGGGGCg > 1:3043007/1‑35 (MQ=255) aaCGGCGACCCGGACCAGCCGATTATTATGGGGCg > 1:6940920/1‑35 (MQ=255) aaCGGCGACCCGGACCAGCCGATTATTATGGGGCg > 1:1104314/1‑35 (MQ=255) aaCGGCGACCCGGACCAGCCGATTATTATGGGGCg > 1:15318382/1‑35 (MQ=255) cGGCGCCCGGGCCCAGCCGATTATTATGGGGCGta < 1:15065206/35‑1 (MQ=18) cGGCGCCCCGGCCCAGCCGATTATTATGGGGCGta < 1:19954558/35‑1 (MQ=18) cGGCGCCCCGGCCCAGCCGATTATTATGGGGCGta < 1:8097184/35‑1 (MQ=18) cGGCGACCCGGACCAGCCGATTATTATGGGGCGta > 1:15927935/1‑35 (MQ=255) ggCGACCCGGACCAGCCGATTATTATGGGGCGtac > 1:20326481/1‑35 (MQ=255) gCGCCCCGGACCAGCCGATTATTATGGGGCGtacc < 1:81793/35‑1 (MQ=255) gCGACCCGGACCAGCCGATTATTATGGGGCGtacc > 1:9191030/1‑35 (MQ=255) gCGACCCGGACCAGCCGATTATTATGGGGCGtacc > 1:9526256/1‑35 (MQ=255) cgccccggaCCAGCCaccacttgcagctcatattc < 1:13427519‑M1/32‑21 (MQ=255) cGACCCTGACCAGCCaccacttgcagctcatattc < 1:8643418‑M1/35‑21 (MQ=255) cGACCCGGACCAGCCaccacttgcagctcatattc < 1:10084924‑M1/35‑21 (MQ=255) gtcccGGACCAGCCGATTATTATGGGGCGtaccta > 1:5494020/3‑35 (MQ=255) gatccggaCCAGCCaccacttgcagctcatattcc < 1:11736599‑M1/32‑22 (MQ=255) gACCCGGACCAGCCGATTATTATGGGGCGtaccta > 1:2267858/1‑35 (MQ=255) gACCCGGACCAGCCGATTATTATGGGGCGtaccta > 1:12257431/1‑35 (MQ=255) gACCCGGACCAGCCGATTATTATGGGGCGtaccta > 1:14534331/1‑35 (MQ=255) ccccGGCCCAGCCGATTATTATGGGGCGtacctac < 1:3980086/34‑1 (MQ=255) aCCCGGCCCAGCCGATTATTATGGGGCGtacctac < 1:6417799/35‑1 (MQ=255) aCCCGGACCAGCCaccacttgcagctcatattcct < 1:9003864‑M1/35‑23 (MQ=255) cccGGCCCAGCCaccacttgcagctcatattcctg < 1:18738431‑M1/35‑24 (MQ=255) cccGGCCCAGCCGATTATTATGGGGCGtacctacc < 1:3435795/35‑1 (MQ=255) cccGGCCCAGCCGATTATTATGGGGCGtacctacc < 1:13732085/35‑1 (MQ=255) cccGGCCCAGCCGATTATTATGGGGCGtacctacc < 1:16041929/35‑1 (MQ=255) cccGGCCCAGCCGATTATTATGGGGCGtacctacc < 1:18113286/35‑1 (MQ=255) cccGGACCAGCCGATTATTATGGGGCGtacctacc > 1:16918328/1‑35 (MQ=255) ccGGCCCAGCCGATTATTATGGGGCGTACCTacca < 1:10502707/35‑1 (MQ=255) ccGGACCAGCCGATTATTATGGGGCGTACCTacca > 1:2403485/1‑35 (MQ=255) cGGGCCAGCCaccacttgcagctcatattcctgca < 1:6739339‑M1/35‑26 (MQ=255) cGGACCAGCCGATTATTATGGGGCGTACCTaccac > 1:17537341/1‑35 (MQ=255) cGGACCAGCCGATTATTATGGGGCGTACCTaccac > 1:14405633/1‑35 (MQ=255) cGGACCAGCCGATTATTATGGGGCGTACCTaccac > 1:6286405/1‑35 (MQ=255) gggccagcCaccacttgcagctcatattcctgcat < 1:9574507‑M1/32‑27 (MQ=255) ggACCAGCCaccacttgcagctcatattcctgcat < 1:16324782‑M1/35‑27 (MQ=255) ggACCAGCCGATTATTATGGGGCGTACCTaccacc > 1:425991/1‑35 (MQ=255) ggACCAGCCGATTATTATGGGGCGTACCTaccacc > 1:13234717/1‑35 (MQ=255) ggACCAGCCGATTATTATGGGGCGTACCTaccacc > 1:13424909/1‑35 (MQ=255) ggACCAGCCGATTATTATGGGGCGTACCTaccacc > 1:13975351/1‑35 (MQ=255) ggACCAGCCGATTATTATGGGGCGTACCTaccacc > 1:731993/1‑35 (MQ=255) gccccAGCCGATTATTATGGGGCGTACCTaccacc < 1:14908595/32‑1 (MQ=255) accccAGCCGATTATTATGGGGCGTACCTaccacc < 1:12067939/32‑1 (MQ=255) gcccagCCaccacttgcagctcatattcctgcatt < 1:9942067‑M1/33‑28 (MQ=255) gACCAGCCaccacttgcagctcatattcctgcatt < 1:6753775‑M1/35‑28 (MQ=255) gACCAGCCGATTATTATTGGGCGTACCTAccacca > 1:1568938/1‑35 (MQ=255) gACCAGCCGATTATTATGGGGCGTACCTAccacca > 1:7514590/1‑35 (MQ=255) cccaGCCacaacttgcagctcatattcctgcattg < 1:6895095‑M1/34‑29 (MQ=255) aCCAGCCaccacttgcagatcatattcctgcattg < 1:517149‑M1/35‑29 (MQ=255) aCCAGCCGATTATTATGGGGCGTACCTACCACCAt > 1:5839582/1‑35 (MQ=255) ccAGCCaccacttgcagctcatattcctgcattgc < 1:5017184‑M1/35‑30 (MQ=255) ccAGCCaccacttgcagctcatattcctgcattgc < 1:2742952‑M1/35‑30 (MQ=255) ccAGCCGATTATTATGGGGCGTACCTACCACCATg > 1:610916/1‑35 (MQ=255) cAGCCaccacttgcagctcatattcctgcattgcn < 1:8302122‑M1/35‑31 (MQ=255) cAGCCGATTATTATGGGGCGTACCTACCACCATGa > 1:18041589/1‑35 (MQ=255) cAGCCGATTATTATGGGGCGTACCTACCACCATGa > 1:9098147/1‑35 (MQ=255) cAGCCGATTATTATGGGGCGTACCTACCACCATGa > 1:3353781/1‑35 (MQ=255) aGCCaccacttgcagctcatattcctgcattgctt > 1:12598625‑M1/1‑4 (MQ=255) aGCCaccacttgcagctcatattcctgcattgctt > 1:3320896‑M1/1‑4 (MQ=255) aGCCGATTATTATGGGGCGTACCTACCACCATGaa > 1:15616574/1‑35 (MQ=255) gCCaccacttgcagctcatattcctgcattgcttt > 1:2600830‑M1/1‑3 (MQ=255) gCCaccacttgcagctcatattcctgcattgcttt < 1:10106947‑M1/35‑33 (MQ=255) gCCaccacttgcagctcatattcctgcattgcttt > 1:10687993‑M1/1‑3 (MQ=255) gCCGATTATTATGGGGCGTACCTACCACCATGaaa > 1:8810855/1‑35 (MQ=255) gCCGATTATTATGGGGCGTACCTACCACCATGaaa > 1:12348016/1‑35 (MQ=255) ccaccacttgcagctcatattcctgcattgctttg < 1:1119625‑M1/35‑34 (MQ=255) ccaccacttgcagctcatattcctgcattgctttg < 1:5979930‑M1/35‑34 (MQ=255) ccaccacttgcagctcatattcctgcattgctttg > 1:12799039‑M1/1‑2 (MQ=255) ccGATTATTATGGGGCGTACCTACCACCGTGaaaa > 1:17300401/1‑35 (MQ=255) ccGATTATTATGGGGCGTACCTACCACCATGaaaa > 1:18379225/1‑35 (MQ=255) ccGATTATTATGGGGCGTACCTACCACCATGaaaa > 1:19529294/1‑35 (MQ=255) ccGATTATTATGGGGCGTACCTACCACCATGaaaa > 1:16178681/1‑35 (MQ=255) ccGATTATAATGGGGCGTACCTACCACCATGaaaa > 1:3874403/1‑35 (MQ=255) caccacttgcagctcatattcctgcattgctttgg < 1:15246666‑M1/35‑35 (MQ=255) caccacttgcagctcatattcctgcattgctttgg < 1:16900374‑M1/35‑35 (MQ=255) cGATTATTATGGGGCGTACCTACCACCATGAAAAc > 1:14515751/1‑35 (MQ=255) cGATTATTATGGGGCGTACCTACCACCATGAAAAc > 1:19814515/1‑35 (MQ=255) cGATTATTATGGGGCGTACCTACCACCATGAAAAc > 1:4513110/1‑35 (MQ=255) | ATTGTGGACTTCCTCAACGGCGACCCGGACCAGCCGATTATTATGGGGCGTACCTACCACCATGAAAAC > REL606/1499395‑1499463 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |