New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 220122361 (0.590)7 (0.090) 3/36 NT 9.6% coding (269/1050 nt) yeiH conserved inner membrane protein
?REL606 = 3512381 86 (1.120)intergenic (‑123/‑210) yhhX/yhhY predicted oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/predicted acetyltransferase

Only 100 of 133 total aligned reads displayed.

ATATTTATTACGTCTGGGTATCATTCTTTATGGCTTCCGTCTGACGTTCTCGCAAATTGCCGATGTCGGT  >  REL606/2201188‑2201257
                                   |                                  
atatTTATTACGTCTGGTATCATTCTTTATGGCtt                                    <  1:14857163/35‑1 (MQ=37)
 tatttattACGTCTGGTTATCATTCTTTATGGCTT                                    >  1:10188979‑M1/1‑35 (MQ=255)
 tatttattACGTCTGGTTATCATTCTTTATGGCTT                                    >  1:7046742‑M1/1‑35 (MQ=255)
 tatttattACGTCTGGGTATCATTCTTTATGGCTT                                    >  1:9736022‑M1/1‑35 (MQ=255)
 tatttattACGTCTGGGTATCATTCTTTATGGCTT                                    <  1:88003‑M1/35‑1 (MQ=255)
 tatttattACGTCTGGGTATCATTCTTTATGGCTT                                    >  1:8317428‑M1/1‑35 (MQ=255)
 tatttattACGTCTGGGTATCATTCTTTATGGCTT                                    <  1:5911666‑M1/35‑1 (MQ=255)
  atttattACGTCTGGGTATCATTCTTTATGGCTTt                                   >  1:3016742‑M1/1‑34 (MQ=255)
  atttattACGTCTGGGTATCATTCTTTATGGCTTt                                   >  1:7488068‑M1/1‑34 (MQ=255)
   tttattACGTCTGGGTATCATTCTTTATGGCTTtt                                  >  1:537652‑M1/1‑33 (MQ=255)
   tttattACGTCTGGGTATCATTCTTTATGGCTTtc                                  >  1:14549885‑M1/1‑33 (MQ=255)
   tttattACGTCTGGGTATCATTCTTTATGGCTTcc                                  <  1:8035391/35‑1 (MQ=255)
   tttattACGTCTGGGTATCATTCTTTATGGCTTcc                                  <  1:12268355/35‑1 (MQ=255)
   tttattACGTCTGGGTATCATTCTTTATGGCTTcc                                  <  1:13351962/35‑1 (MQ=255)
   tttattACGTCTGGGTATCATTATTTTTGGTTTcc                                  <  1:2443511/35‑1 (MQ=21)
   tttattACGTCTGGGCATCATTCTTTATGGCTTtt                                  >  1:20303753‑M1/1‑33 (MQ=255)
    ttattaCGTCTGGGTATCATTCTTTATGGCTTttt                                 >  1:19541059‑M1/1‑32 (MQ=255)
    ttattaCGTCTGGGTATCATTCTTTATGGCTTtct                                 >  1:3040352‑M1/1‑32 (MQ=255)
    ttattaCGTCTGGGTATCATTCTTTATGGCTTtct                                 >  1:9545667‑M1/1‑32 (MQ=255)
    ttattaCGTCTGGGTATCATTCTTTATGGCTTCCg                                 <  1:606524/35‑1 (MQ=255)
    ttattaCGTCTGGGTATCATTCTTTATGGCTTCCg                                 <  1:14577054/35‑1 (MQ=255)
    ttattaCGTCTGGGTATCATTCTTTATGGCTTCCg                                 <  1:1001694/35‑1 (MQ=255)
     tattaCGTCTGGGTATCATTCTTTATGGCTTtttt                                >  1:8055474‑M1/1‑31 (MQ=255)
     tattaCGTCTGGGTATCATTCTTTATGGCTTCCGt                                <  1:14429575/35‑1 (MQ=255)
      attaCGTCTGGGTATCATTCTTTATGGCTTCCGTc                               <  1:17131596/35‑1 (MQ=255)
      attaCGTCTGGGTATCATTCTTTATGGCTTCCGTc                               <  1:15739149/35‑1 (MQ=255)
      attaCGTCTGGGTATCATTCTTTATGGCTTCCGTc                               <  1:9789303/35‑1 (MQ=255)
       ttaCGTCTGGGTATCATTCTTTATGGCTTtttttt                              >  1:133325‑M1/1‑29 (MQ=255)
       ttaCGTCTGGGTATCATTCTTTATGGCTTCCGTCt                              <  1:17795623/35‑1 (MQ=255)
       ttaCGTCTGGGTATCATTCTTTATGGCTTCCGTCt                              <  1:8966469/35‑1 (MQ=255)
       ttaAGTCTGGGTATCATTCTTTATGGCTTCCGTCt                              <  1:4364838/35‑1 (MQ=255)
        taCGTCTGGGTATCATTCTTTATGGCTTttttctt                             >  1:14440275‑M1/1‑28 (MQ=255)
        taCGTCTGGGTATCATTCTTTATGGCTTttttctg                             >  1:1078202‑M1/1‑28 (MQ=255)
        taCGTCTGGGTATCATTCTTTATGGCTTttgtttt                             >  1:16423517‑M1/1‑28 (MQ=255)
        taCGTCTGGGTATCATTCTTTATGGCTTtcttttt                             >  1:8114827‑M1/1‑28 (MQ=255)
        taCGTCTGGGTATCATTCTTTATGGCTTCCGTCTg                             <  1:9008882/35‑1 (MQ=255)
         aCGTCTGGGTATCATTCTTTATGGCTTtttttttg                            >  1:496730‑M1/1‑27 (MQ=255)
         aCGTCTGGGTATCATTCTTTATGGCTTTCCTCtta                            >  1:14318219/1‑33 (MQ=25)
         aCGTCTGGGTATCATTCTTTATGGCTTTCCTCtta                            >  1:14654398/1‑33 (MQ=25)
         aCGTCTGGGTATCATTCTTTATGGCTTCCGTCTGa                            <  1:12842609/35‑1 (MQ=255)
          cGTCTGGGTATCATTCTTTATGGCTTTCTTCttgt                           >  1:5478953/1‑32 (MQ=21)
          cGTCTGGGTATCATTCTTTATGGCTTCCGTCTGAc                           <  1:9293075/35‑1 (MQ=255)
          cGTCTGGGTATCATTCTTTATGGCTTCCGTCTGAc                           <  1:12613816/35‑1 (MQ=255)
           gTCTGGGTATCATTCTTTATGGCTTTCGTTTGACg                          >  1:16536988/1‑35 (MQ=25)
           gTCTGGGTATCATTCTTTATGGCTTTCGTCTGACg                          >  1:15452704/1‑35 (MQ=255)
            tCTGGGTATCATTCTTTATGGCTTCCGTCTGACGt                         <  1:12103131/35‑1 (MQ=255)
            tCTGGGTATCATTCTTTATGGCTTCCGTCTGACGt                         <  1:15563726/35‑1 (MQ=255)
             cTGGGTATCATTCTTTATGGCTTTCGTCTTACggt                        >  1:12352274/1‑33 (MQ=25)
             cTGGGTATCATTCTTTATGGCTTTCGTCTGGCGtt                        >  1:18122692/1‑35 (MQ=25)
             cTGGGTATCATTCTTTATGGCTTTCCTCTGGCGtt                        >  1:16973765/1‑35 (MQ=21)
             cTGGGTATCATTCTTTATGGCTTCCGTCTGACGtt                        <  1:14734247/35‑1 (MQ=255)
              tGGGTATCATTCTTTATGGCTTTCGTCTGACGTtc                       >  1:11502494/1‑35 (MQ=255)
              tGGGTATCATTCTTTATGGCTTCCGTCTGACGTtc                       <  1:11538655/35‑1 (MQ=255)
               gggTATCATTCTTTATGGCTTCCGTCTGACGTtct                      <  1:14162289/35‑1 (MQ=255)
               gggTATCATTCTTTATGGCTTCCGTCTGACGTtct                      <  1:19363803/35‑1 (MQ=255)
                ggTATCATTCTTTATGGCTTCCGTCTGACGTtctc                     <  1:20451313/35‑1 (MQ=255)
                ggTATCATTATTTATGGCTTCCGTCTGACGTtctc                     <  1:2208947/35‑1 (MQ=255)
                 gTATCATTCTTTATGGCTTCCGTCTGACGTTATCg                    <  1:12575498/35‑1 (MQ=255)
                  tATCATTCTTTATGGCTTCCGTCTGACGTTCTCGc                   <  1:19297364/35‑1 (MQ=255)
                  tATCATTCTTTATGGCTTCCGTCTGACGTTCTCGc                   <  1:16636753/35‑1 (MQ=255)
                   aTCATTCTTTATGGCTTCCGTCTGACGTTCTCGCa                  <  1:8799243/35‑1 (MQ=255)
                   aTCATTCTTTATGCCTTCCGTCTGACGTTCTCGCa                  <  1:17076451/35‑1 (MQ=255)
                    tCATTCTTTATGGCTTCCGTCTGACGTTCTCGCaa                 <  1:6689198/35‑1 (MQ=255)
                    tCATTCTTTATGGCTTCCGTCTGACGTTCTCGCaa                 <  1:13433844/35‑1 (MQ=255)
                     cATTCTTTATGGCTTCCGTCTGACGTTCTCGCaaa                <  1:16731221/35‑1 (MQ=255)
                       ttCTTTATGGCTTCCGTCTGACGTTCTCGCAAAtt              <  1:19138975/35‑1 (MQ=255)
                       ttCTTTATGGCTTCCGTCTGACGTTCTCGCAAAtt              <  1:16218500/35‑1 (MQ=255)
                        tCTTTATGGCTTCCGTCTGACGTTCTCGCAAATTg             <  1:1633117/35‑1 (MQ=255)
                        tCTTTATGGCTTCCGTCTGACGTTCTCGCAAATTg             <  1:7781769/35‑1 (MQ=255)
                          tttATGGCTTCCGTCTGACGTTCTCGCAAATTGcc           <  1:18453870/35‑1 (MQ=255)
                           ttATGGCTTCCGTCTGACGTTCTCGCAAATTGCCg          <  1:19273518/35‑1 (MQ=255)
                           ttATGGCTTCCGTCTGACGTTCTCGCAAATTGCCg          <  1:11215277/35‑1 (MQ=255)
                           ttATGGCTTACGTCTGACGTTCTCGCAAATTGCCg          <  1:17906981/35‑1 (MQ=255)
                            tATGGCTTCCGTCTGACGTTCTCGCAAATTGCCGa         <  1:142348/35‑1 (MQ=255)
                             aTGGCTCCCGTCTGACGTTCTCGCAAATTGCCGAt        <  1:10366294/35‑1 (MQ=255)
                             aTGGATTCCGTCTGACGTTCTCGCAAATTGCCGAt        <  1:19830035/35‑1 (MQ=255)
                              tgtcTTCCGTCTGACGTTCTCGCAAATTGCCGATg       <  1:19965825/32‑1 (MQ=255)
                              tGGCTTCCGTCTGACGTTCTCGCAAATTGCCGATg       >  1:14476397/1‑35 (MQ=255)
                              tGGCTTCCGTCTGACGTTCTCGCAAATTGCCGATg       >  1:15844283/1‑35 (MQ=255)
                              tGGCTTCCGTCTGACGTTCTCGCAAATTGCCGATg       >  1:4642299/1‑35 (MQ=255)
                               ggCTTCCGTCTGACGTTCTCGCAAATTGCCGCTGt      >  1:1418849/1‑35 (MQ=255)
                               ggCTTCCGTCTGACGTTCTCGCAAATTGCCGATGt      >  1:15867293/1‑35 (MQ=255)
                               ggCTTCCGTCTGACGTTCTCGCAAATTGCCGATGt      <  1:1325446/35‑1 (MQ=255)
                                gcctCCGTCTGACGTTCTCGCAAATTGCCGATGTc     >  1:6112785/4‑35 (MQ=255)
                                gCTTCCGTCTGACGTTCTCGCAAATTGCCGATGTc     >  1:2312678/1‑35 (MQ=255)
                                gCTTCCGTCTGACGTTCTCGCAAATTGCCGATGTc     >  1:13465068/1‑35 (MQ=255)
                                gCTTCCGTCTGACGTTCTCGCAAATTGCCGATGTc     <  1:5640636/35‑1 (MQ=255)
                                 cTTCCGTCTGACGTTCTCGCAAATTGCCGATGTCg    <  1:3217562/35‑1 (MQ=255)
                                 cTTCCGTCTGACGTTCTCGCAAATTGCCGATGTCg    >  1:3085685/1‑35 (MQ=255)
                                 cTTCCGTCTGACGTTCTCGCAAATTGCCGATGTCg    >  1:19567726/1‑35 (MQ=255)
                                 cTTCCGTCTGACGTTCTCGCAAATTGCCGATGTCg    >  1:6620533/1‑35 (MQ=255)
                                 cTTCCGTCTGACGTTCTCGCAAATTGCCGATGTCg    <  1:18793896/35‑1 (MQ=255)
                                 cTTCCGTCTGACGTTCTCGCAAATTGCCGATGTCg    >  1:69839/1‑35 (MQ=255)
                                 cTTCCGTCTGACGTTCTCGCAAATTGCCGATGTCg    <  1:6896210/35‑1 (MQ=255)
                                  ttCCGTCTGACGTTCTCGCAAATTGCCGATGTCgg   <  1:3223286/35‑1 (MQ=255)
                                  ttCCGTCTGACGTTCTCGCAAATTGCCGATGTCgg   >  1:6079170/1‑35 (MQ=255)
                                  ttCCGTATGACGTTCTCGCAAATTGCCGATGTCgg   >  1:2749911/1‑35 (MQ=255)
                                   tCCGTCTGACGTTCTCGCAAATTGCCGATGTCggg  >  1:9411619/1‑34 (MQ=255)
                                   tCCGTCTGACGTTCTCGCAAATTGCCGATGTCGGt  <  1:13680289/35‑1 (MQ=255)
                                   tCCGTCAGACGTTCTCGCAAATTGCCGATGTCggg  >  1:15554612/1‑34 (MQ=255)
                                   |                                  
ATATTTATTACGTCTGGGTATCATTCTTTATGGCTTCCGTCTGACGTTCTCGCAAATTGCCGATGTCGGT  >  REL606/2201188‑2201257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.