New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1495878 = | 73 (0.710) | 13 (0.280) | 3/22 | NT | 21.2% | coding (215/1500 nt) | ansP | L‑asparagine transporter |
? | REL606 | = 1714633 | 138 (1.340) | intergenic (‑76/+90) | ydhP/ECB_01628 | putative transport protein (MFS family); b1657_2/predicted transporter |
CAGCACTGGCACTGGTTTATTTAATTTGTGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1495911‑1495878 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTGTGAT < REL606/1714633‑1714622 ||||||||||||| CAGCACTGGCACTGGTTTATTTAATTTGTGGCTTT > 1:8086802/1‑35 CAGCACTGGCACTGGTTTATTTAATTTGTGGCTTT > 1:1212107/1‑35 CAGCACTGGCACTGGTTTATTTAATTTGTGGCTTT > 1:15946010/1‑35 AGCACTGGCACTGGTTTATTTAATTTGTGGCTTTT > 1:18794021/1‑35 AGCACTGGCACTGGTTTATTTAATTTGTGGCTTTT > 1:1427216/1‑35 CACTGGCACTGGTTTATTTAATTTGTGGCTTTTTT > 1:12773933/1‑35 CACTGGCACTGGTTTATTTAATTTGTGGCTTTTTT > 1:2397071/1‑35 ACTGGCACTGGTTTATTTAATTTGTGGCTTTTTTT > 1:897934/1‑35 CTGGCACTGGTTTATTTAATTTGTGGCTTTTTTTT > 1:10079278/1‑35 CTGGCACTGGTTTATTTAATTTGTGGCTTTTTTTT > 1:7296266/1‑35 CTGGCACTGGTTTATTTAATTTGTGGCTTTTTTTT > 1:4809283/1‑35 CTGGCACTGGTTTATTTAATTTGTGGCTTTTTTTT > 1:4285196/1‑35 CTGGCACTGGTTTATTTAATTTGTGGCTTTTTTTT > 1:16544581/1‑35 TGGCACTGGTTTATTTAATTTGTGGCTTTTTTTTg > 1:9881888/1‑34 TGGCACTGGTTTATTTAATTTGTGGCTTTTTTTTT > 1:1094358/1‑35 TGGCACTGGTTTATTTAATTTGTGGCTTTTTTTTT > 1:16746764/1‑35 TGGCACTGGTTTATTTAATTTGTGGCTTTTTTTTT > 1:17777885/1‑35 TGGCACTGGTTTATTTAATTTGTGGCTTTTTTTTT > 1:17935473/1‑35 GCACTGGTTTATTTAATTTGTGGCTTTTTTTTTTT > 1:5710282/1‑35 GCACTGGTTTATTTAATTTGTGGCTTTTTTTTGTT > 1:7927655/1‑35 CACTGGTTTATTTAATTTGTGGCTTTTTTTTTTTT > 1:13129606/1‑35 ACTGGTTTATTTAATTTGTGGCTTTTTTTTTTTTT > 1:6400014/1‑35 ACTGGTTTATTTAATTTGTGGCTTTTTTTTTTTTT > 1:16519350/1‑35 ACTGGTTTATTTAATTTGTGGCTTTTTTTTTTTTT > 1:19761796/1‑35 CTGGTTTATTTAATTTGTGGCTTTTTTTTTTTTTT > 1:2982251/1‑35 TGGTTTATTTAATTTGTGGCTTTTTTTTTTTTTTT > 1:12805398/1‑35 GGTTTATTTAATTTGTGGCTTTTTTTTTTTTTTTT > 1:11227310/1‑35 GGTTTATTTAATTTGTGGCTTTTTTTTTTTTTTTT > 1:20150861/1‑35 GTTTATTTAATTTGTGGCTTTTTTTTTTTTTTTTT > 1:4655794/1‑35 GTTTATTTAATTTGTGGCTTTTTTTTTTTTTTTTT > 1:3960308/1‑35 GTTTATTTAATTTGTGGCTTTTTTTTTTTTTTTTT > 1:14144400/1‑35 TTTATTTAATTTGTGGCTTTTTTTTTTTTTTTTTT > 1:11224695/1‑35 TTTATTTAATTTGTGGCTTTTTTTTGTTTTTTTTT > 1:17678028/1‑35 TTATTTAATTTGTGGCTTTTTTTTTTTTTTTTTTT > 1:13210334/1‑35 TATTTAATTTGTGGCTTTTTTTTTTTTTTTTTTct > 1:16544902/1‑33 TATTTAATTTGTGGCTTTTTTTTTTTTTTTTTTTT > 1:9686595/1‑35 TATTTAATTTGTGGCTTTTTTTTTTTTTTTTTTTT > 1:11871196/1‑35 TATTTAATTTGTGGCTTTTTTTTTTTTTTTTTTTT > 1:13095537/1‑35 ATTTAATTTGTGGCTTTTTTTTTTTTTTTTTTTTT > 1:14118269/1‑35 ATTTAATTTGTGGCTTTTTTTTTTTTTTTTTTTTT > 1:9297861/1‑35 TTAATTTGTGGCTTTTTTTTTTTTTTTTTTTTTcg > 1:6410223/1‑33 TAATTTGTGGCTTTTTTTTTTTTTTTTTTTTTTtt > 1:1513531/1‑33 TAATTTGTGGCTTTTTTTTTTTTTTTTTTTTTTct > 1:18032676/1‑33 TAATTTGTGGCTTTTTTTTTTTTTTTTTTTTTTGT > 1:3608280/1‑35 TAATTTGTGGCTTTTTTTTTTTTTTTTTTTTTCGT > 1:13530190/1‑35 TAATTTGTGGCTTTTTTTTTTTTTTTTTTTTTCGT > 1:10984997/1‑35 TAATTTGTGGCTTTTTTTTTTTTTTTTTTTTTCGT > 1:2221259/1‑35 AATTTGTGGCTTTTTTTTTTTTTTTTTTTTTTGTG > 1:4758686/1‑35 ATTTGTGGCTTTTTTTTTTTTTTTTTTTTTTGTGt > 1:2278898/1‑34 ATTTGTGGCTTTTTTTTTTTTTTTTTTTTTTGTGc > 1:3844838/1‑34 TTTGTGGCTTTTTTTTTTTTTTTTTTTTTTGTtgg > 1:19308922/1‑32 ||||||||||||| CAGCACTGGCACTGGTTTATTTAATTTGTGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1495911‑1495878 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTGTGAT < REL606/1714633‑1714622 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |