New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 989609 | 56 (0.540) | 13 (0.160) | 4/38 | NT | 32.0% | coding (766/894 nt) | ycbJ | hypothetical protein |
? | REL606 | 2795469 = | 11 (0.140) | coding (831/873 nt) | ygcG | hypothetical protein |
ATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/989571‑989609 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGGC > REL606/2795469‑2795502 ATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTG > 1:17466979/1‑35 ATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTG > 1:19220449/1‑35 ATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTG > 1:13839767/1‑35 TTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGG > 1:9027900/1‑35 TTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGG > 1:1597519/1‑35 TTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGC < 1:17048665/35‑1 TTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGC < 1:7518429/35‑1 TTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGC < 1:5868205/35‑1 TTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGC < 1:14668023/35‑1 TTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGC < 1:4090033/35‑1 TGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCG < 1:13629086/35‑1 TGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCG > 1:13915821/1‑35 TGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCG < 1:12368150/35‑1 TGCTCTGGAGTTACATGCAACGCGCGCCAGTGGCG < 1:5213967/35‑1 GCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG > 1:13547320/1‑35 GCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG < 1:6104612/35‑1 GCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG > 1:12273941/1‑35 GCTCTGGAGTTACCTGCAACGCGCCCCAGTGGCGG > 1:19352679/1‑35 CTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGG > 1:10481470/1‑35 TCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGGG > 1:17102860/1‑35 TCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGGG > 1:7944263/1‑35 CTGGAGTTACCTTCAACGCGCGCCAGTGGCGGGGG > 1:4592357/1‑35 CTGGAGTTACCTGCAACGCGCGCCAGTGGCGGGGG > 1:8718294/1‑35 TGGAGTTACGTGCAACGCGCGCCAGTGGCGGGGGg > 1:14687469/1‑34 GGAGTTACCTGCAACGCGCGCCAGTGGCGGGGGCa > 1:13625183/1‑34 GGAGTTACCTGCAACGCGCGCCAGTGGCGGGGGCG > 1:3193225/1‑35 GAGTTACCTGCAACGCGCGCCAGTGGCGGGGGagt > 1:17837103/1‑32 GAGTTACCTGCAACGCGCGCCAGTGGCGGGGGCGt > 1:20112009/1‑34 GAGTTACCTGCAACGCGCGCCAGTGGCGGGGGCGG > 1:256790/1‑35 GAGTTACCTGCAACGCGCGCCAGTGGCGGGGGCGG > 1:3733318/1‑35 AGTTACCTGCAACGCGCGCCAGTGGCGGGGGGGGT > 1:209421/1‑35 AGTTACCTGCAACGCGCGCCAGTGGCGGGGGCGGT > 1:9407853/1‑35 GTTACCTGCAACGCGCGCCAGTGGCGGGGGGGGTc > 1:703186/1‑34 GTTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTg > 1:16866409/1‑34 GTTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTc > 1:18471756/1‑34 GTTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTc > 1:17744746/1‑34 GTTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTT > 1:2566668/1‑35 TTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTcc > 1:17778729/1‑33 TTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTca > 1:1318561/1‑33 TTACCTGCAACGCGCGCCAGTGGCGGGGGCGGTTC > 1:6223488/1‑35 ACCTGCAACGCGCGCCAGTGGCGGGGTCGGTTCTc > 1:11433879/1‑34 tGCGGGGGCGGTTATTCTGGAGGTGGCGGCGCATC < 1:11993433/34‑1 GCGGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCC < 1:15607195/35‑1 GCGGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCC < 1:7857409/35‑1 CGGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCG < 1:3707507/35‑1 CGGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCG < 1:17137562/35‑1 GGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGG < 1:2422434/35‑1 GGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGG < 1:9939635/35‑1 GGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGGC < 1:15429025/35‑1 ATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/989571‑989609 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGGC > REL606/2795469‑2795502 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |