New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2840701 = | 74 (0.720) | 27 (0.270) | 8/46 | NT | 24.4% | coding (1097/1098 nt) | mltA | membrane‑bound lytic murein transglycosylase A |
? | REL606 | 3891539 = | 96 (0.970) | intergenic (‑85/‑138) | yieN/kup | fused predicted transcriptional regulator: sigma54 activator protein/conserved protein/potassium transporter |
Only 100 of 166 total aligned reads displayed.
CATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCGGT > REL606/2840667‑2840735 | cttatCCGTAAAAACGGCATACAGAATATCACATc < 1:14249595/33‑1 (MQ=255) ccacattaacctggctcaaagaaaaataccccccc > 1:7306471‑M1/35‑35 (MQ=255) ccacattaacctggctcaaagaaaaataccccccc < 1:10862690‑M1/1‑1 (MQ=255) ccacattaacctggctcaaagaaaaataccccccc > 1:20212054‑M1/35‑35 (MQ=255) ccacattaacctggctcaaagaaaaataccccccc > 1:1269890‑M1/35‑35 (MQ=255) cATATCCGTAAAAACGGCATACAGAATATCACATc > 1:775339/1‑35 (MQ=255) cATATCCGTAAAAACGGCATACAGAATATCACATc > 1:15165056/1‑35 (MQ=255) cATATCCGTAAAAACGGCATACAGAATATCACATc < 1:14148369/35‑1 (MQ=255) cATATCCGTAAAAACGGCATACAGAATATCACATc > 1:5414982/1‑35 (MQ=255) ttatCCGTAAAAACGGCATACAGAATATCACATCa < 1:17850537/34‑1 (MQ=255) ttatCCGTAAAAACGGCATACAGAATATCACATCa < 1:19518970/34‑1 (MQ=255) tatCCGTAAAAACGGCATACAGAATATCACATCAg < 1:17155931/35‑1 (MQ=255) tatCCGTAAAAACGGCATACAGAATATCACATCAg > 1:11768166/1‑35 (MQ=255) atCCGTAAAAACGGCATACAGAATATCACATCAGc < 1:7694601/35‑1 (MQ=255) atCCGTAAAAACGGCATACAGAATATCACATCAGc > 1:19715838/1‑35 (MQ=255) atCCGTAAAAACGGCATACAGAATATCACATCAGc > 1:6235827/1‑35 (MQ=255) atCCGTAAAAACGGCATACAGAATATCACATCAGc > 1:11644681/1‑35 (MQ=255) atCCGTAAAAACGGCATACAGAATATCACATCAGc < 1:12058911/35‑1 (MQ=255) atCCGTAAAAACGGCATACAGAATATCACATCAGc < 1:12419691/35‑1 (MQ=255) atCCGTAAAAACGGCATACAGAATATCACATCAGc > 1:5189436/1‑35 (MQ=255) tCCGTAAAAACGGCATACAGAATATCACATCAGcc < 1:11766249/35‑1 (MQ=255) tCCGTAAAAACGGCATACAGAATATCACATCAGcc < 1:10703332/35‑1 (MQ=255) ccGTAAAAACGGCATACAGAATATCACATCAGCCg > 1:5118628/1‑35 (MQ=255) ccGTAAAAACGGCATACAGAATATCACATCAGCCg > 1:7034962/1‑35 (MQ=255) ccGTAAAAACGGCATACAGAATATCACATCAGCCg < 1:18522050/35‑1 (MQ=255) cagTAAAAACGGCATACAGAATATCACATCAGCCg < 1:12266798/33‑1 (MQ=255) cGTAAAAACGGCATACAGAATATCACATCAGCCGc > 1:13268372/1‑35 (MQ=255) cGTAAAAACGGCATACAGAATATCACATCAGCCGc > 1:13792213/1‑35 (MQ=255) tAAAAACTGCATACAGAATATCACATCAGCCGCTa > 1:10201610/1‑35 (MQ=255) tAAAAACGGCATACAGAATATCACATCAGCCGCTa > 1:555203/1‑35 (MQ=255) tAAAAACGGCATACAAAATATCACATGAGCCGCTa < 1:2320867/35‑1 (MQ=37) aaaaaCGGCATACAGAATATCACATCAGCCGCTaa > 1:3974427/1‑35 (MQ=255) aaaaaCGGCATACAGAATATCACATCAGCCGCTaa > 1:13671222/1‑35 (MQ=255) aaaaaCGGCATACAGAATATCACATCAGCCGCTaa > 1:19776641/1‑35 (MQ=255) aaaaaCGGCATACAGAATATCACATCAGCCGCTaa > 1:17778031/1‑35 (MQ=255) aaaaCGGCATACAGAATATCACATCAGCCGCTaaa > 1:10047984/1‑35 (MQ=255) aaCGGCATACAGAATATCACATCAGCCGCTAAAGa > 1:16862111/1‑35 (MQ=255) aCGGCATACAGAATATCACATCAGCCGCTAAAGAc > 1:12821460/1‑35 (MQ=255) cGGCATACAGAATATCACATCAGCCGCTAAAGACg > 1:2163147/1‑35 (MQ=255) cGGCATACAGAATATCACATCAGCCGCTAAAGACg > 1:15515036/1‑35 (MQ=255) cGGCATACAGAATATCACATCAGCCGCTAAAGACg > 1:17516503/1‑35 (MQ=255) ggCATACAGAATATCACATCAGCCGCTAAAGACGt > 1:5063875/1‑35 (MQ=255) gCATACAGAATATCACATCAGCCGCTAAAGACGtt > 1:5240481/1‑35 (MQ=255) gCATACAGAATATCACATCAGCCGCTAAAGACGtt > 1:114234/1‑35 (MQ=255) gCATACAGAATATCACATCAGCCGCTAAAGACGtt > 1:14522032/1‑35 (MQ=255) cATACAGAATATCACATCAGCCGCTAAAGACGTTa > 1:9461353/1‑35 (MQ=255) cATACAGAATATCACATCAGCCGCTAAAGACGTTa > 1:10357483/1‑35 (MQ=255) cATACAGAATATCACATCAGCCGCTAAAGACGTTa > 1:1496901/1‑35 (MQ=255) aaaaaaaaataccccccCAGCCGCTAAAGACGTTa > 1:8422934‑M1/18‑35 (MQ=255) aTACAGAATATCACATCAGCCGCTAAAGACGTTAc > 1:3582469/1‑35 (MQ=255) aTACAGAATATCACATCAGCCGCTAAAGACGTTAc > 1:253289/1‑35 (MQ=255) tACAGAATATCACATCAGCCGCTAAAGACGTTAcc > 1:9651706/1‑35 (MQ=255) tACAGAATATCACATCAGCCGCTAAAGACGTTAcc > 1:2700388/1‑35 (MQ=255) aaaaaaataccccccCAGCCGCTAAAGACGTTAcc > 1:15846926‑M1/16‑35 (MQ=255) aCAGAATATCACATCAGCCGCTAAAGACGTTACCt > 1:20410844/1‑35 (MQ=255) aCAGAATATCACATCAGCCGCTAAAGACGTTACCt > 1:4146554/1‑35 (MQ=255) aCAAAATACCACCCCAGCCGCTAAAGACGTTACCt < 1:451243/35‑1 (MQ=19) caaaaTATCACCCCAGCCGCTAAAGACGTTACCTg < 1:18105981/32‑1 (MQ=25) cAGAATATCACATCAGCCGCTAAAGACGTTACCTg > 1:11328891/1‑35 (MQ=255) aaaaataccccccCAGCCGCTAAAGACGTTACCTg > 1:2115748‑M1/14‑35 (MQ=255) aaaataccccccCAGCCGCTAAAGACGTTACCTgc > 1:10167706‑M1/13‑35 (MQ=255) aaaataccccccCAGCCGCTAAAGACGTTACCTgc > 1:20029582‑M1/13‑35 (MQ=255) aGAATATCACATCAGCCGCTAAAGACGTTACCTgc > 1:13440675/1‑35 (MQ=255) aGAATATCACATCAGCCGCTAAAGACGTTACCTgc > 1:6885794/1‑35 (MQ=255) gAATATCACATCAGCCGCTAAAGACGTTACCTgcg > 1:6332935/1‑35 (MQ=255) gAATATCACATCAGCCGCTAAAGACGTTACCTgcg > 1:1027232/1‑35 (MQ=255) aaataccccccCAGCCGCTAAAGACGTTACCTgcg > 1:5918085‑M1/12‑35 (MQ=255) aaacaccccccCAGCCGCTAAAGACGTTACCTgcg > 1:3875650‑M1/12‑35 (MQ=255) aaaaaccccccCAGCCGCTAAAGACGTTACCTgcg > 1:8837548‑M1/12‑35 (MQ=255) aaaTATACCACCAGCCGCTAAAGAAGTTACCTgcg < 1:8392379/34‑1 (MQ=16) aataccccccCAGCCGCTAAAGACGTTACCTgcgc > 1:7687687‑M1/11‑35 (MQ=255) aaTATCACATCAGCCGCTAAAGACGTTACCTgcgc > 1:4929535/1‑35 (MQ=255) ttgccccccCAGCCGCTAAAGACGTTACCTGCGcc > 1:13089583‑M1/10‑35 (MQ=255) atatCACATCAGCCGCTAAAGACGTTACCTGCGcc > 1:5657527/1‑35 (MQ=255) atatCACATCAGCCGCTAAAGACGTTACCTGCGcc > 1:980454/1‑35 (MQ=255) ataccccacCAGCCGCTAAAGACGTTACCTGCGcc > 1:6679040‑M1/10‑35 (MQ=255) tcccccccCAGCCGCTAAAGACGTTACCTGCGccc > 1:18989422‑M1/9‑35 (MQ=255) atCACATCAGCCGCTAAAGACGTTACCTGCGCCCg > 1:19749865/1‑35 (MQ=255) atCACATCAGCCGCTAAAGACGTTACCTGCGCCCg > 1:18208892/1‑35 (MQ=255) atCACATCAGCCGCTAAAGACGTTACCTGCGCCCg > 1:11024751/1‑35 (MQ=255) accccccCAGCCGCTAAAGACGTTACCTGCGCCCg > 1:3307985‑M1/8‑35 (MQ=255) accccccCAGCCGCTAAAGACGTTACCTGCGCCCg > 1:17644781‑M1/8‑35 (MQ=255) ccccccCAGCCGCTAAAGACGTTACCTGCGCCCgg > 1:2216413‑M1/7‑35 (MQ=255) ccccccCAGCCGCTAAAGACGTTACCTGCGCCCgg > 1:20374650‑M1/7‑35 (MQ=255) ccccacCAGCCGCTAAAGACGTTACCTGCGCCCgg > 1:17128694‑M1/7‑35 (MQ=255) cccccCAGCCGCTAAAGACGTTACCTGCGCCCggg > 1:1609758‑M1/6‑35 (MQ=255) cacaTCAGCCGCTAAAGACGTTACCTGCGCCCggg > 1:7169291/1‑35 (MQ=255) cacaTCAGCCGCTAAAGACGTTACCTGCGCCCggg > 1:13044800/1‑35 (MQ=255) cacaTCAGCCGCTAAAGACGTTACCTGCGCCCggg > 1:15535658/1‑35 (MQ=255) cccCAGCCGCTAAAGACGTTACCTGCGCCCGGGGc > 1:6073460‑M1/4‑35 (MQ=255) cccCAGCCGCTAAAGACGTTACCTGCGCCCGGGGc > 1:15871758‑M1/4‑35 (MQ=255) cccCAGCCGCTAAAGACGTTACCTGCGCCCGGGGc > 1:16426131‑M1/4‑35 (MQ=255) caTCAGCCGCTAAAGACGTTACCTGCGCCCGGGGc > 1:16287776/1‑35 (MQ=255) aTCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCg > 1:7643001/1‑35 (MQ=255) aTCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCg > 1:18852713/1‑35 (MQ=255) aTCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCg > 1:9351968/1‑35 (MQ=255) tCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCgg > 1:9076250/1‑35 (MQ=255) cCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCgg > 1:867488‑M1/2‑35 (MQ=255) CAGCCGCTAAAGACGTTACCTGCGCCCGGGGcggg < 1:12928036‑M1/35‑2 (MQ=255) CAGCCGCTAAAGACGTTACCTGCGCCCGGGGcggg < 1:3069595‑M1/35‑2 (MQ=255) | CATATCCGTAAAAACGGCATACAGAATATCACATCAGCCGCTAAAGACGTTACCTGCGCCCGGGGCGGT > REL606/2840667‑2840735 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |