New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 213184671 (0.690)4 (0.040) 3/46 NT 7.0% coding (848/1053 nt) fbaB fructose‑bisphosphate aldolase
?REL606 2517490 = 38 (0.390)coding (76/864 nt) ypfJ hypothetical protein

Only 100 of 107 total aligned reads displayed.

GCCTGCAGCACCGCCGGAGTTTATCAACCCGGCCCGGCCCATATAGCAGTTAGCTAACTGATAACGCAC  >  REL606/2131812‑2131880
                                  |                                  
gCCTGCAGCACCGCCGGAGTTTATCAACCCGGCCC                                    >  1:12135044‑M1/1‑35 (MQ=255)
cccTGCACCCCCGCCGGAGTTTATCAAcccggccc                                    <  1:16306351/34‑1 (MQ=37)
 ccTGCAGCACCGCCGGAGTTTATCAAcccggcccg                                   >  1:2998473/1‑35 (MQ=255)
 ccTGCAGCACCGCCGGAGTTTATCAAcccggcccg                                   >  1:5789703/1‑35 (MQ=255)
 ccTCCAGCCCCGCCGGAGTTTATCAAcccggcccg                                   <  1:5524420/35‑1 (MQ=37)
  cTGCAGCACCGCCGGAGTTTATCAAcccggcccgg                                  >  1:18356930/1‑35 (MQ=255)
   tGCAGCACCGCCGGAGTTTATCAACccggcccggc                                 >  1:11158424/1‑35 (MQ=255)
   tGCAGCACCGCCGGAGTTTATCAACccggcccggc                                 >  1:4736951/1‑35 (MQ=255)
    gcagcaCCGCCGGAGTTTATCAACCcggcccggcc                                >  1:577874/1‑35 (MQ=255)
       gccccgccgGAGTTTATCAACCCGGCCCGGCCCat                             <  1:17163859/32‑1 (MQ=255)
       gcaCCGCCGGAGTTTATCAACCCGGCCCGGCCCat                             >  1:6424936/1‑35 (MQ=255)
       gcaCCGCCGGAGTTTATCAACCCGGCCCGGCCCat                             >  1:876752/1‑35 (MQ=255)
       cccccgccgGAGTTTATCAACCCGGCCCGGCCCat                             <  1:13964064/32‑1 (MQ=255)
        ccccgccgGAGTTTATCAACCCGGCCCGGCCCata                            <  1:8998371/33‑1 (MQ=255)
        ccccgccgGAGTTTATCAACCCGGCCCGGCCCata                            <  1:13204304/33‑1 (MQ=255)
        ccccgccgGAGTTTATCAACCCGGCCCGGCCCata                            <  1:6630609/33‑1 (MQ=255)
        ccccgccgGAGTTTATCAACCCGGCCCGGCCCata                            <  1:10543245/33‑1 (MQ=255)
        caCCGCCGGAGTTTATCAACCCGGCCCGGCCCata                            >  1:11940955/1‑35 (MQ=255)
         cccgccgGAGTTTATCAACCCGGCCCGGCCCatat                           <  1:19105596/34‑1 (MQ=255)
         aCCGCCGGAGTTTATCAACCCGGCCCGGCCCatat                           >  1:18518247/1‑35 (MQ=255)
         aCCGCCGGAGTTTATCAACCCGGCCCGGACCacat                           >  1:9396642/1‑35 (MQ=38)
          ccgccgGAGTTTATCAACCCGGCCCGGCCCAtata                          <  1:4987577/35‑1 (MQ=255)
          ccgccgGAGTTTATCAACCCGGCCCGGCCCAtata                          >  1:15380688/1‑35 (MQ=255)
           cgacgGAGTTTATCAACCCGGCCCGGCCCATATAg                         <  1:9539191/32‑1 (MQ=255)
            gccgGAGTTTATCAACCCGGCCCGGCCCATATAGc                        >  1:6337146/1‑35 (MQ=255)
            gccgGAGTTTATCAACCCGGCCCGGCCCATATAGc                        <  1:15509817/35‑1 (MQ=255)
             ccgGAGTTTATCAACCCGGCCCGGCCCATATAGCa                       <  1:9434593/35‑1 (MQ=255)
              cgGAGTTTATCAACCCGGCCCGGCCCATATAGCAg                      >  1:2267539/1‑35 (MQ=255)
              cgGAGTTTATCAACCCGGCCCGGCCCATATAGCAg                      >  1:19600961/1‑35 (MQ=255)
              cgGAGTTTATCAACCCGGCCCGGCCCATATAGCAg                      >  1:16657804/1‑35 (MQ=255)
              cgGAGTTTATCAACCCGGCCCGGCCCATATAGCAg                      >  1:5854382/1‑35 (MQ=255)
              cgGAGTTTATCAACCCGGCCCGGCCCATATAGCAg                      <  1:15947764/35‑1 (MQ=255)
              cgGAGTTTATCAACCCGGCCCGCCCCATATAGCAg                      >  1:11625149/1‑35 (MQ=255)
              cgGAGTTTATCAACCCCGCCCGGCCCATATCGccg                      >  1:7434505/1‑33 (MQ=25)
               ggAGTTTATCAACCCGGCCCGGCCCATATAGCAGt                     >  1:1119009/1‑35 (MQ=255)
                gattttATCAACCCGGCCCGTCCCATATAGCAGtt                    <  1:1908983/32‑1 (MQ=37)
                gAGTTTATCACCCCGGCCCGGCCCATATAGCAGtt                    <  1:7592488/35‑1 (MQ=255)
                gAGTTTATCAACCCGGCCCGGCCCATATAGCAGtt                    <  1:2780933/35‑1 (MQ=255)
                gAGTTTATCAACCCGGCCCGGCCCATATAGCAGtt                    <  1:6429402/35‑1 (MQ=255)
                gAGTTTATCAACCCGGCCCGGCCCATATAGCAGtt                    >  1:17503170/1‑35 (MQ=255)
                 aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa                   >  1:15724570/1‑35 (MQ=255)
                 aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa                   >  1:4346084/1‑35 (MQ=255)
                 aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa                   <  1:1575401/35‑1 (MQ=255)
                 aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa                   >  1:1269765/1‑35 (MQ=255)
                 aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa                   >  1:16602839/1‑35 (MQ=255)
                 aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa                   >  1:16460833/1‑35 (MQ=255)
                 aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa                   >  1:16064651/1‑35 (MQ=255)
                  gtctATCAACCCGGCCCGGCCCATATAGCAGTTAg                  >  1:8728234/4‑35 (MQ=255)
                  gTTTATCAACCCGGCCCGGCCCATATAGCAGTTAg                  <  1:7754764/35‑1 (MQ=255)
                  gTTTATCAACCCGGCCCGGCCCATATAGCAGTTAg                  <  1:13179114/35‑1 (MQ=255)
                   tttATCAACCCGGCCCGGCCCATATAGCAGTTAGc                 >  1:982004/1‑35 (MQ=255)
                    ttATCAACCCGGCCCGGCCCATATAGCAGTTAGCt                <  1:6786743/35‑1 (MQ=255)
                    ttATCAACCCGGCCCGGCCCATATAGCAGTTAGCt                >  1:12811244/1‑35 (MQ=255)
                     tATCAACCCGGCCCGGCCCATATAGCAGTTAGCTa               <  1:1299267/35‑1 (MQ=255)
                     tATCAACCCGGCCCGGCCCATATAGCAGTTAGCTa               >  1:14828572/1‑35 (MQ=255)
                     tATCAACCCGGCCCGGCCCATATAGCAGTTAGCTa               <  1:8203285/35‑1 (MQ=255)
                      ttCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa              <  1:14497458/34‑1 (MQ=255)
                      aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa              <  1:669363/35‑1 (MQ=255)
                      aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa              >  1:7287298/1‑35 (MQ=255)
                      aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa              >  1:5983415/1‑35 (MQ=255)
                      aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa              >  1:7713849/1‑35 (MQ=255)
                      aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa              >  1:17979941/1‑35 (MQ=255)
                      aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa              >  1:9366056/1‑35 (MQ=255)
                      aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa              <  1:11200333/35‑1 (MQ=255)
                       tCAACCCGGCCCGGCCCATATAGCAGTTAGCTAAc             <  1:964101/35‑1 (MQ=255)
                       tCAACCCGGCCCGGCCCATATAGCAGTTAGCTAAc             >  1:14028452/1‑35 (MQ=255)
                        cgaCCCGGCCCGGCCCATATAGCAGTTAGCTAACt            <  1:12006876/33‑1 (MQ=255)
                        cAACCCGGCCCGGCCCATATAGCAGTTAGCTAACt            <  1:1874068/35‑1 (MQ=255)
                        cAACCCGGCCCGGCCCATATAGCAGTTAGCTAACt            <  1:6750592/35‑1 (MQ=255)
                         aaCCCGGCCCcgcccatagatggaccaccagagct           <  1:9533917‑M1/35‑26 (MQ=255)
                         aaCCCGGCCCGGCCCATATAGCAGTTAGCTAACTg           <  1:6069525/35‑1 (MQ=255)
                          aCCCGGCCCcgcccatagatggaccaccagagctg          <  1:11478054‑M1/35‑27 (MQ=255)
                          aCCCGGCCCcgcccatagatggaccaccagagctg          <  1:8847089‑M1/35‑27 (MQ=255)
                          aCCCGGCCCGGCCCATATAGCAGTTAGCTAACTGa          >  1:7356187/1‑35 (MQ=255)
                           cccggcccggCCCATATAGCAGTTAGCTAACTGAt         >  1:9171589/1‑35 (MQ=255)
                           cccGGCCCcgcccatagatggaccaccagagctgt         <  1:6092893‑M1/35‑28 (MQ=255)
                            ccggcccggcCCATATAGCAGTTAGCTAACTGATa        <  1:4909671/35‑1 (MQ=255)
                             cggcccggccCATATAGCAGTTAGCTAACTGATaa       >  1:10982099/1‑35 (MQ=255)
                             cggcccggccCATATAGCAGTTAGCTAACTGATaa       <  1:13763706/35‑1 (MQ=255)
                             cggcccggccCATATAGCAGTTAGCTAACTGATaa       <  1:3422570/35‑1 (MQ=255)
                              ggcccggcccATATAGCAGTTAGCTAACTGATAAc      <  1:19095290/35‑1 (MQ=255)
                              ggCCCcgcccatagatggaccaccagagctgttgc      <  1:20403071‑M1/35‑31 (MQ=255)
                              ggCCCcgcccatagatggaccaccagagctgttgc      <  1:20179815‑M1/35‑31 (MQ=255)
                              ggCCCcgcccatagatggaccaccagagctgttgc      <  1:1909173‑M1/35‑31 (MQ=255)
                               ggcccgcccatagatggaccaccagagctgttgcg     <  1:271233‑M1/33‑32 (MQ=255)
                               gcccggcccATATAGCAGTTAGCTAACTGATAACg     <  1:6310186/35‑1 (MQ=255)
                                cccggcccATATAGCAGTTAGCTAACTGATAACGc    <  1:5881389/35‑1 (MQ=255)
                                cccggcccATATAGCAGTTAGCTAACTGATAACGc    >  1:13021623/1‑35 (MQ=255)
                                ccccgcccatagatggaccaccagagctgttgcgc    <  1:19893074‑M1/35‑33 (MQ=255)
                                 ccggcccATATAGCAGTTAGCTAACTGATAACGCa   >  1:16731761/1‑35 (MQ=255)
                                 ccggcccATATAGCAGTTAGCTAACTGATAACGCa   >  1:14724638/1‑35 (MQ=255)
                                 ccggcccATATAGCAGTTAGCTAACTGATAACGCa   >  1:6403633/1‑35 (MQ=255)
                                 ccggcccATATAGCAGTTAGCTAACTGATAACGCa   >  1:19844372/1‑35 (MQ=255)
                                 cccgcccatagatggaccaccagagctgttgcgcc   <  1:11400163‑M1/35‑34 (MQ=255)
                                 cccgcccatagatggaccaccagagctgttgcgcc   <  1:11257680‑M1/35‑34 (MQ=255)
                                  cggcccATATAGCAGTTAGCTAACTGATAACGCAc  >  1:16968045/1‑35 (MQ=255)
                                  cggcccATATAGCAGTTAGCTAACTGATAACGCAc  <  1:5548825/35‑1 (MQ=255)
                                  cggcccATATAGCAGTTAGCTAACTGATAACGCAc  >  1:11115988/1‑35 (MQ=255)
                                  ccgcccatagatggaccaccagagctgttgcgcct  <  1:2661434‑M1/35‑35 (MQ=255)
                                  ccgcccatagatggaccaccagagctgttgcgcct  >  1:6091900‑M1/1‑1 (MQ=255)
                                  |                                  
GCCTGCAGCACCGCCGGAGTTTATCAACCCGGCCCGGCCCATATAGCAGTTAGCTAACTGATAACGCAC  >  REL606/2131812‑2131880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.