New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 875814 =63 (0.610)19 (0.220) 5/40 NT 23.4% coding (127/597 nt) ybjG undecaprenyl pyrophosphate phosphatase
?REL606 = 3285418 72 (0.840)coding (277/654 nt) yhbL isoprenoid biosynthesis protein with amidotransferase‑like domain

TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/875851‑875814
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAATT  <  REL606/3285418‑3285385
                                                                        
TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGG                                       >  1:16029636/1‑35
TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGG                                       >  1:11200131/1‑35
TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGG                                       >  1:8123150/1‑35
TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGG                                       >  1:11966280/1‑35
TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGG                                       >  1:6072934/1‑35
 GCTAAAGATTTGATTACCGTGGTGCGGTTGCTGGC                                      <  1:19153585/35‑1
 GCTAAAGATTTGATTACCGTGGTGCCGTTGCTGGC                                      >  1:9054847/1‑35
  CTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCC                                     <  1:7872098/35‑1
  CTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCC                                     <  1:2152324/35‑1
  CTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCC                                     >  1:4257062/1‑35
  CTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCC                                     >  1:1396575/1‑35
  CTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCC                                     <  1:9437435/35‑1
   TAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG                                    <  1:5960085/35‑1
   TAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG                                    <  1:7394922/35‑1
   TAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG                                    >  1:11555470/1‑35
   TAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG                                    <  1:5936939/35‑1
   TAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG                                    >  1:18792216/1‑35
    AAAGATTTGATTACCGTGGTGCCGTTGCTGGCCGG                                   >  1:16400411/1‑35
     AAGATTTTATTACCGTGGTGCCGTTGCTGGCCGGG                                  >  1:14217126/1‑35
     AAGATTTGATTACCGTGGTGCCGTTGCTGGCCGGG                                  >  1:17528159/1‑35
      AGATTTGATTACCGTGGTGCCGTTGCTGGCCGGGG                                 >  1:16904344/1‑35
       GATTTGATTACCGTGGTGCCGTTGCTGGCCGGGGG                                >  1:20580219/1‑35
       GATTTGATTACCGTGGTGCCGTTGCTGGCCGGGGG                                >  1:8574143/1‑35
       GATTTGATTACCGTGGTGCCGTTGCTGGCCGGGGG                                >  1:15772664/1‑35
       GATTTGATTACCGTCGTGCCGTTGCTGGCCGGGGG                                >  1:3450289/1‑35
        ATTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGG                               >  1:4932315/1‑35
        ATTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGG                               >  1:12745906/1‑35
        ATTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGG                               >  1:5820602/1‑35
         TTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGa                              >  1:17674200/1‑34
         TTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGG                              >  1:18380023/1‑35
         TTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGG                              >  1:20455775/1‑35
         TTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGG                              >  1:11815992/1‑35
         TTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGG                              >  1:13750854/1‑35
         TTTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGG                              >  1:2777538/1‑35
          TTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGGT                             >  1:8949098/1‑35
          TTGATTACCGTGGTGCCGTTGCTGGCCGGGGGGGT                             >  1:4140564/1‑35
           TGATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTT                            >  1:7997012/1‑35
           TGATTACCGTGGTGCCGTTGCTGGCCGGGGGGCTT                            >  1:9494065/1‑35
            GATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTT                           >  1:14925027/1‑35
            GATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTT                           >  1:15285841/1‑35
            GATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTT                           >  1:7648009/1‑35
            GATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTT                           >  1:18169103/1‑35
            GATTACCGTGGTGCCGTTGCTGGCCGGGGGGGCTT                           >  1:2347548/1‑35
            GATTACCGTGGTGCCGTTGCTGGCCGGGGGGGCTT                           >  1:13597295/1‑35
             ATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTTt                          >  1:18119420/1‑34
             ATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTTN                          >  1:9942611/1‑35
             ATTACCGTGGTGCCGTTGCTGGCCGGGGGGGTTTG                          >  1:9442202/1‑35
                 CCGTGGTGCCGTTGCTGGCCGGGGGGGTTTGGtgg                      >  1:15312708/1‑32
                                  GCCGGGGGGGTTTGTCGCGGCGAAGAATTTAAGCA     >  1:14664523/1‑35
                                  GCCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCA     <  1:10737366/35‑1
                                  GCCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCA     <  1:11895661/35‑1
                                  GCCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCA     <  1:3122640/35‑1
                                  GCCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCA     <  1:15067253/35‑1
                                   CCGGTGGGGTTTGGCGCGGCGAAGAATTTAAGCAA    >  1:7615931/1‑35
                                   CCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAA    >  1:3098342/1‑35
                                   CCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAA    <  1:2216517/35‑1
                                    CGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAAT   <  1:14826452/35‑1
                                    CGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAAT   >  1:18066657/1‑35
                                    CGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAAT   <  1:7164230/35‑1
                                    CGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAAT   <  1:5363426/35‑1
                                     GGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAATT  <  1:4694345/35‑1
                                     GGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAATT  <  1:501905/35‑1
                                     GGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAATT  >  1:10988355/1‑35
                                                                        
TGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/875851‑875814
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAATT  <  REL606/3285418‑3285385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.