New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 447249 = | 84 (0.820) | 18 (0.180) | 5/46 | NT | 17.5% | intergenic (‑21/‑197) | tesB/ybaY | acyl‑CoA thioesterase II/predicted outer membrane lipoprotein |
? | REL606 | 1286712 = | 89 (0.900) | intergenic (+36/‑147) | narI/ECB_01206 | nitrate reductase 1, gamma (cytochrome b(NR)) subunit/hypothetical protein |
Only 100 of 228 total aligned reads displayed.
CGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTC > REL606/1286678‑1286746 | gttatactcaactcactttggcttgctgcggcagg > 1:8794015‑M2/35‑35 (MQ=255) ttatactcaactcactttggcttgctgcggccggc > 1:1108847‑M2/34‑34 (MQ=255) tggcaagcgaatgaatatgccgtggtggGGCgggg < 1:15152729‑M1/7‑1 (MQ=255) tggcaagcgaatgaatatgccgtggtggGGCgggg < 1:13391104‑M1/7‑1 (MQ=255) tggcaagcgaatgaatatgccgtggtggGGCgggg < 1:8602864‑M1/7‑1 (MQ=255) taggccgccagaaccagttgttgcgtaaGGCgggg < 1:6799146‑M1/7‑1 (MQ=255) taggccgccagaaccagttgttgcgtaaGGCgggg < 1:12547507‑M1/7‑1 (MQ=255) gAATTTTAGTTCACATAGACCCTGCTTCGGCgggg > 1:9641240/1‑35 (MQ=255) gAATTTTAGTTCACATAGACCCTGCTTCGGCgggg < 1:14110352/35‑1 (MQ=255) aggccgccagaaccagttgttgcgtaaGGCGGGGt < 1:10396277‑M1/8‑1 (MQ=255) aggccgccagaaccagttgttgcgtaaGGCGGGGt < 1:18878622‑M1/8‑1 (MQ=255) actgcgcccagcaggcagggcaggagtcGCGGGGt < 1:6735293‑M1/7‑1 (MQ=255) aaTTTTAGTTCACATAGACCCTGCTTCGGCGGGGt < 1:15519154/35‑1 (MQ=255) aaTTTTAGTTCACATAGACCCTGCTTCGGCGGGGt < 1:15107725/35‑1 (MQ=255) aaTTTTAGTTCACATAGACCCTGCTTCGGCGGGGt < 1:20594066/35‑1 (MQ=255) ggccgccagaaccagttgttgcgtaaGGCGGGGtt < 1:6858154‑M1/9‑1 (MQ=255) atactcaactcactttggcttgctgcggcagGGtt > 1:4593894‑M2/32‑35 (MQ=255) atactcaactcactttggcttgctgcggcagGGtt > 1:515354‑M2/32‑35 (MQ=255) aTTTTAGTTCACATAGACCCTGCTTCGGCtggggt > 1:10054941/1‑33 (MQ=37) aTTTTAGTTCACATAGACCCTGCTTCGGCGGGGtt < 1:5834969/35‑1 (MQ=255) tgcgcccagcaggcagggcaggagtcgcgggggtt < 1:7389424‑M1/9‑4 (MQ=255) tactcaactcactttggcttgctgcggcagGTttt > 1:14688577‑M2/31‑35 (MQ=255) gccgccagaaccagttgttgcgtaaGGCGGGgtta < 1:16954289‑M1/10‑2 (MQ=255) caagcgaatgaatatgccgtggtggggcgggggtt < 1:8449417‑M1/10‑4 (MQ=255) caagcgaatgaatatgccgtggtggggcggggggg < 1:7171694‑M1/10‑4 (MQ=255) tttAGTTCACATAGACCCTGCTTCGGCGGGGgttt > 1:6024420/1‑35 (MQ=255) gcgcccagcaggcagggcaggagtcGCGGGGtttt < 1:15266931‑M1/10‑1 (MQ=255) ccgccagaaccagttgttgcgtaaGGCGGGGtttt < 1:7900049‑M1/11‑1 (MQ=255) aagcgaatgaatatgccgtggtggGGCGGGgtttg < 1:10717920‑M1/11‑2 (MQ=255) ttAGTTCACATAGACCCTGCTTCGGCGGGGttttt < 1:13335840/35‑1 (MQ=255) ctcaactcactttggcttgctgcggcagGGttttt > 1:11804003‑M2/29‑35 (MQ=255) cgccagaaccagttgttgcgtaaGGCGGGTttttt < 1:1097387‑M1/12‑1 (MQ=255) cgccagaaccagttgttgcgtaaGGCGGGGttttt < 1:5177674‑M1/12‑1 (MQ=255) agcgaatgaatatgccgtggtggCGCGGGGttttt < 1:15657331‑M1/12‑1 (MQ=255) tcaactcactttggcttgctgcggcagGGtttttt > 1:18590846‑M2/28‑35 (MQ=255) tcaactcactttggcttgctgcggcagGGttgttt > 1:9217269‑M2/28‑35 (MQ=255) gcccagcaggcagggcaggagtcGCGGGGtgtttt < 1:8241798‑M1/12‑1 (MQ=255) gccagaaccagttgttgcgtaaGGCGGGGtttttt < 1:6588445‑M1/13‑1 (MQ=255) cgaatgaatatgccgtggtggGGCGGGGttttttt < 1:16936278‑M1/14‑1 (MQ=255) cgaatgaatatgccgtggtggGGCGGGGttttttt < 1:4422187‑M1/14‑1 (MQ=255) ccagaaccagttgttgcgtaaGGCGGGGttttttt < 1:3839295‑M1/14‑1 (MQ=255) caactcactttggcttgctgcggcagGgttttttc > 1:16507253‑M2/27‑34 (MQ=255) aGTTCACATAGACCCTGCTTCGGCGGGGttttttt < 1:15749372/35‑1 (MQ=255) aGTTCACATAGACCCTGCTTCGGCGGGGgtttttt > 1:15974824/1‑35 (MQ=255) gTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTa < 1:421066/35‑1 (MQ=255) ccagcaggcagggcaggagtcGCGGGGTTTTTTTa < 1:4449016‑M1/14‑1 (MQ=255) cagaaccagttgttgcgtaaGGCGgggtttttctt < 1:13832342‑M1/15‑4 (MQ=255) cagaaccagttgttgcgtaaGGCGgggtttttctt < 1:10246583‑M1/15‑4 (MQ=255) cagaaccagttgttgcgtaaGGCGGGgtttttttt < 1:9088719‑M1/15‑2 (MQ=255) cagaaccagttgttgcgtaaGGCGGGgtttttttc < 1:17758393‑M1/15‑2 (MQ=255) cagaaccagttgttgcgtaaGGCGGGGTTTTTTTa < 1:2220813‑M1/15‑1 (MQ=255) aactcactttggcttgctgcggcagGgtttttttt > 1:3030599‑M2/26‑34 (MQ=255) ttCACATAGACCCTGCTTCGGCGGGGttttttttt > 1:17694/1‑33 (MQ=255) ttCACATAGACCCTGCTTCGGCGGGGTTTTTTTAt < 1:12113704/35‑1 (MQ=255) ttCACATAGACCCTGCTTCGGCGGGGGTTTTTTAt > 1:8284543/1‑35 (MQ=255) ttCACATAGACACTGCTTCGGCGGGGTTTTTTTAt < 1:9888925/35‑1 (MQ=255) tccacaTAGACCCTGCTTCGGCGGGGGTTTTTTAt > 1:576444/3‑35 (MQ=25) cagcaggcagggcaggagtcGCGgggttttttcac < 1:200466‑M1/15‑4 (MQ=255) cagcaggcagggcaggagtcGCGGGGTTTTTTTAt < 1:17151065‑M1/15‑1 (MQ=255) tCACATAGACCCTGCTTCGGCGGGGGTTTTTTATg > 1:9741248/1‑35 (MQ=255) ctcactttggcttgctgcggcagggttttttttgg > 1:4015481‑M2/24‑32 (MQ=255) ctcactttggcttgctgcggcagGGTTTTTTTTTg > 1:16550107‑M2/24‑35 (MQ=255) tcactttggcttgctgcggcagGGTTTTTTTTTgg > 1:18337540‑M2/23‑35 (MQ=255) tcactttggcttgctgcggcagGGTTTTTTTTTgg > 1:12200993‑M2/23‑35 (MQ=255) aaccagttgttgcgtaaGGCGGGGTTTTtttacgg < 1:12388186‑M1/18‑4 (MQ=255) acaTAGACCCTGCTTCGGCGGGGTTTTTTTATggg < 1:10291870/35‑1 (MQ=255) acaTAGACCCTGCTTCGGCGGGGTTTTTTTATggg < 1:4068029/35‑1 (MQ=255) caTAGACCCTGCTTCTGCGTGGTTTTTTTATGGGc > 1:16778687/1‑35 (MQ=25) aTAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCa < 1:13014682/35‑1 (MQ=255) aTAGACCCTGCTTCGGCGGGGGTTTTTTTTTGGCa > 1:16071287/1‑35 (MQ=18) tAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCAc < 1:7533223/35‑1 (MQ=255) tAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCAc < 1:8998668/35‑1 (MQ=255) tAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCAc < 1:19426065/35‑1 (MQ=255) tAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCAc < 1:19211715/35‑1 (MQ=255) tAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCAc < 1:5983221/35‑1 (MQ=255) tAGACCCTGCTTCGGCGGGGGTTTTTTTTGGGCAc > 1:4860414/1‑35 (MQ=25) tAGACACTGCTTCGGCGGGGTTTTTTTATGGGCAc < 1:13241447/35‑1 (MQ=255) aGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACg < 1:17616947/35‑1 (MQ=255) gACCCTGCTTCGGCGGGGTTTTTTTATGGGCACgg < 1:18429771/35‑1 (MQ=255) gACCCTGCTTCGGCGGGGTTTTTTTATGGGCACgg < 1:4913605/35‑1 (MQ=255) gACCCTGCTTCGGCGGGGGTTTTTTATTGGGACgg > 1:20335957/1‑35 (MQ=21) ccccTGCTTCGGCGGGGTTTTTTTATGGGCACGGt < 1:247416/34‑1 (MQ=255) aCCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGt < 1:11407610/35‑1 (MQ=255) aCCCTGCTTCGGCGGGGGTTTTTTATGGGCACggg > 1:8027447/1‑34 (MQ=255) cccTGCTTCGGCGGGGTTTTTTTATGGGCACGGTg < 1:1734396/35‑1 (MQ=255) ccTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGc < 1:7701132/35‑1 (MQ=255) cTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCg < 1:2380369/35‑1 (MQ=255) tGCTTGGGCGGGGTTTTTTTATGGGCACGGTGCgg < 1:5321011/35‑1 (MQ=255) tGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCgg < 1:18172816/35‑1 (MQ=255) gCTTCGGCGGTGTTTTTTTATGGGCACGGTGCggg < 1:1968444/35‑1 (MQ=255) ttCGTCGGGGTTTTTTTATGGGCACGGTGCGGGGt > 1:20194319/1‑35 (MQ=255) gctgGGTTTTTTTATGGGCACGGTGCGGGGTGAGt > 1:4998928‑M2/5‑35 (MQ=255) GCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGt > 1:7205126‑M1/1‑35 (MQ=255) GCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGt < 1:14945268‑M1/35‑1 (MQ=255) CGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGtt > 1:5381239‑M1/1‑35 (MQ=255) GGGGTTTTTTTATGGGCACGGTGCGGGGCGAGTTg < 1:2918252‑M1/35‑1 (MQ=255) gGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGt < 1:9418298‑M2/34‑1 (MQ=255) ggTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTc > 1:6179304/1‑35 (MQ=255) ggTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTc > 1:19890461/1‑35 (MQ=255) ggTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTc > 1:11288712/1‑35 (MQ=255) | CGAATTTTAGTTCACATAGACCCTGCTTCGGCGGGGTTTTTTTATGGGCACGGTGCGGGGTGAGTTGTC > REL606/1286678‑1286746 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |