New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 422591 = | 80 (0.780) | 9 (0.110) | 4/38 | NT | 16.0% | intergenic (‑278/+184) | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
? | REL606 | 3002837 = | 31 (0.380) | coding (307/2517 nt) | yeeR | predicted membrane protein |
ACGATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/422627‑422591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCCTG > REL606/3002837‑3002869 ACGATTCAGCTAATGAGTCTTTATTTTCCCCCCCA > 1:19644290/1‑35 ACGATTCAGCTAATGAGTCTTTATTTTCCCCCCCA < 1:817555/35‑1 nGATTCAGCTAATGAGTCTTTATTTTCCCCCCCAC > 1:15836821/2‑35 CGATTCAGCTAATGAGTCTTTATTTTCCCCCCCAC > 1:18011126/1‑35 CGATTCAGCTAATGAGTCTTTATTTTCCCCCCCAC > 1:15560677/1‑35 CGATTCAGCTAATGAGTCTTTATTTTCCCCCCCAC > 1:15147218/1‑35 GATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC > 1:10535549/1‑35 GATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC < 1:9170637/35‑1 GATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC > 1:9026973/1‑35 GATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC > 1:4748879/1‑35 GATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC > 1:4957172/1‑35 GATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC < 1:15359976/35‑1 GATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC > 1:1234755/1‑35 GATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC > 1:14703611/1‑35 GATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC < 1:1436646/35‑1 GATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC > 1:13457696/1‑35 GATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC > 1:8085840/1‑35 ttTTTTCCCCCCCACCGCTCTCGCCGGTGGTCTGC < 1:5885077/33‑1 tTTTTCCCCCCCACCGCTCTCGCCGGTGGTCTGCT < 1:3051421/34‑1 TTTTCCCCCCCACCGCTCTCGCCGGTGGTCTGCTG < 1:12077096/35‑1 TTTTCCCCCCCACCGCTCTCGCCGGTGGTCTGCTG < 1:15597821/35‑1 TTTTCCCCCCCACCGCTCTCGCCGGTGGTCTGCTG < 1:3741699/35‑1 TTTTCCCCCCCACCGCTCTCGCCGGTGGTCTGCTG < 1:17314847/35‑1 TTTCCCCCCCACCGCTCTCGCAGGTGGTCTGCTGG < 1:523962/35‑1 TTCCCCCCCACCGCTCTCGCCGGTGGTCTGCTGGC < 1:18601162/35‑1 TCCCCCCCACCGCTCTCGCCGGTGGTCTGCTGGCT < 1:5202221/35‑1 gCCCCCCACCGCGCTCGCCGGTGGTCTGCTGGCTG < 1:11250385/34‑1 CCCCCCACCGCTCTCGCCGGTGGTCTGCTGGCTGT < 1:17526147/35‑1 CCCCCCACCGCTCTCGCCGGTGGTCTGCTGGCTGT < 1:6998721/35‑1 CCCCCCACCGCTCTCGCCGGTGGTCTGCTGGCTGT < 1:5729844/35‑1 CCCCCCACCGCTCTCGCCGGTGGTCTGCTGGCTGT < 1:4815654/35‑1 CCCCCACCGCTCTCGCCGGTGGTCTGCTGGCTGTT < 1:2942602/35‑1 CCCCACCGCTCTCGCCGGTGGTCTGCTGGCTGTTC < 1:3698596/35‑1 CCCCACCGCTCTCGCCGGTGGTCTGCTGGCTGTTC < 1:4948007/35‑1 cccCCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCC < 1:9458990/32‑1 CCACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCC < 1:15688254/35‑1 CCACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCC < 1:16657015/35‑1 CCACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCC < 1:17413320/35‑1 CCACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCC < 1:6219819/35‑1 CCACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCC < 1:12237246/35‑1 CCACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCC < 1:885531/35‑1 CACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCC < 1:15661618/35‑1 ACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCCT < 1:14025910/35‑1 ACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCCT < 1:13937304/35‑1 ACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCCT < 1:2340/35‑1 ACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCCT < 1:19902738/35‑1 ACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCCT < 1:17521371/35‑1 CCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCCTG < 1:493070/35‑1 CCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCCTG < 1:13344278/35‑1 CCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCCTG < 1:11648480/35‑1 ACGATTCAGCTAATGAGTCTTTATTTTCCCCCCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/422627‑422591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCCTG > REL606/3002837‑3002869 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |