Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,015,771 | IS150 (–) +3 bp | 97.6% | coding (1192‑1194/1677 nt) | ECB_02816 → | KpsD protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2775877 | NA (NA) | 109 (1.160) | 37/44 | NT | 97.9% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 3015771 = | 2 (0.020) | coding (1192/1677 nt) | ECB_02816 | KpsD protein | |||||
* | ? | REL606 | = 3015773 | 3 (0.040) | 97 (0.980) | 40/46 | NT | 96.6% | coding (1194/1677 nt) | ECB_02816 | KpsD protein |
? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 350 total aligned reads displayed.
ATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCC > REL606/3015739‑3015807 | aTCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACtt < 1:1934452/35‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaCTTTc > 1:10585671‑M2/31‑35 (MQ=255) ctctcGCTGCAAAAGCTGGAGGAAGCCTCACTTtg < 1:11507080‑M1/35‑3 (MQ=255) tcatcgtccaacaagatgggtgcagtacaCTTTCt > 1:8237403‑M2/30‑35 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaCTTTCt > 1:3602582‑M2/30‑35 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaCTTTCt > 1:12178769‑M2/30‑35 (MQ=255) catcgtccaacaaaatgggtgcagtacaCTTTCTg < 1:19019247‑M2/7‑1 (MQ=255) catcgtccaacaaaatgggtgcagtacaCTTTCTg < 1:15619745‑M2/7‑1 (MQ=255) catcgtccaacaaaatgggtgcagtacaCTCTctt < 1:10129657‑M2/7‑2 (MQ=255) tcGCTGCAAAAGCTGGAGTAAGCCTCACTTtgtac > 1:591700‑M1/1‑30 (MQ=255) atcgtccaacaaaatgggtgcagtacaCTTTCTGc < 1:18571660‑M2/8‑1 (MQ=255) cGCTGCAAAAGCTGGAGGAAGCCTCACTTtgtact < 1:10612558‑M1/35‑7 (MQ=255) cGCTGCAAAAGCTGGAGGAAGCCTCACTTtgtact < 1:6295033‑M1/35‑7 (MQ=255) gCTGCAAAAGCTGGAGGAAGCCTCACTTtgtactg > 1:5065151‑M1/1‑28 (MQ=255) gCTGCAAAAGCTGGAGGAAGCCTCACTTtgtactg < 1:13367379‑M1/35‑8 (MQ=255) cgtccaacaaaatgggtgcagtacaCTTTCTGccc < 1:12376254‑M2/10‑1 (MQ=255) gtccaacaaaatgggtgcagtacaCTTTCTGCCCa < 1:200984‑M2/11‑1 (MQ=255) gtccaacaaaatgggtgcagtacaCTTTCTGCCCa > 1:2115644‑M2/25‑35 (MQ=255) gtccaacaaaatgggtgcagtacaCTTTCTGCCCa < 1:16002933‑M2/11‑1 (MQ=255) tccaacaaaatgggtgcagtacaCTTTCTGCCCAg < 1:8892937‑M2/12‑1 (MQ=255) tGCAAAAGCTGGAGGAAGCCTCACTTtgtactgac > 1:2810173‑M1/1‑26 (MQ=255) tGCAAAAGCTGGAGGAAGCCTCACTTtgtactgac < 1:7783829‑M1/35‑10 (MQ=255) gCAAAAGCTGGAGGAAGCCTCACTTtgtactgacc > 1:11668331‑M1/1‑25 (MQ=255) gCAAAAGCTGGAGGAAGCCTCACTTtgtactgacc < 1:12652253‑M1/35‑11 (MQ=255) gCAAAAGCTGGAGGAAGCCTCACTTtgtactgacc > 1:5339020‑M1/1‑25 (MQ=255) gCAAAAGCTGGAGGAAGCCTCACTTtgtactgacc < 1:1288707‑M1/35‑11 (MQ=255) ccaacaaaatgggtgcagtacaCTTTCTGCCCAGt < 1:18462505‑M2/13‑1 (MQ=255) cAAAAGCTGGAGGAAGCCTCACTTtgtactgaccc > 1:17540841‑M1/1‑24 (MQ=255) aacaaaatgggtgcagtacaCTTTCTGCCCAGTCa < 1:18263547‑M2/15‑1 (MQ=255) aacaaaatgggtgcagtacaCTTTCTGCCCAGTCa < 1:15815354‑M2/15‑1 (MQ=255) aaaaGCTGGAGGAAGCCTCACTTtgtactgacccc < 1:4499658‑M1/35‑13 (MQ=255) aaaaGCTGGAGGAAGCCTCACTTtgtactgacccc < 1:12251268‑M1/35‑13 (MQ=255) acaaaatgggtgcagtacaCTTTCTGCCCAGTCAt > 1:19286715‑M2/20‑35 (MQ=255) acaaaatgggtgcagtacaCTTTCTGCCCAGTCAt < 1:1438419‑M2/16‑1 (MQ=255) aaaGCTGGAGGAAGCCTCACTTtgtactgacccca > 1:20249177‑M1/1‑22 (MQ=255) aaaGCGGGAGGAAGCCTCACTTtgtactgacccca < 1:20401881‑M1/35‑14 (MQ=255) aaGCTGGAGGAAGCCTCACTTtgtactgaccccaa < 1:19489234‑M1/35‑15 (MQ=255) aaaatgtgtgcagtacaCTTTCTGCCCAGTCATcc > 1:15094267‑M2/18‑35 (MQ=255) aaaatgggtgcagtacaCTTTCTGCCCAGTCATcc < 1:8980174‑M2/18‑1 (MQ=255) aaaatgggtgcagtacaCTTTCTGCCCAGTCATcc < 1:5710199‑M2/18‑1 (MQ=255) aaaatgggtgcagtacaCTTTCTGCCCAGTCATcc < 1:10993932‑M2/18‑1 (MQ=255) aaaatgggtgcagtacaCTTTCTGCCCAGTCATcc > 1:14968577‑M2/18‑35 (MQ=255) aaaatgggtgcagtacaCTTTCTGCCCAGTCATcc > 1:9695032‑M2/18‑35 (MQ=255) aaaatgggtgcagtacaCTTTCTGCACAGTCATcc < 1:7277826‑M2/18‑1 (MQ=255) aGCTGGAGGAAGCCTCACTTtgtactgaccccaaa < 1:5473164‑M1/35‑16 (MQ=255) gCTGGAGGAAGCCTCACTTtgtactgaccccaaaa < 1:12468061‑M1/35‑17 (MQ=255) aaatgggtgcagtacaCTTTCTGCACAGTCATcca < 1:6067611‑M2/19‑1 (MQ=255) cTGGAGGAAGCCTCACTTtgtactgaccccaaaaa < 1:16849819‑M1/35‑18 (MQ=255) cTGGAGGAAGCCTCACTTtgtactgaccccaaaaa < 1:16416681‑M1/35‑18 (MQ=255) aattggtgcagtacaCTTTCTGCCCAGTCATccac > 1:7176387‑M2/16‑35 (MQ=255) aatgggtgcagtacaCTTTCTGCCCAGTCATccac > 1:3259591‑M2/16‑35 (MQ=255) aatgggtgcagtacaCTTTCTGCCCAGTCATccac > 1:6693452‑M2/16‑35 (MQ=255) tGGAGGAAGCCTCACTTtgtactgaccccaaaaag > 1:4751912‑M1/1‑17 (MQ=255) tGGAGGAAGCCTCACTTtgtactgaccccaaaaag > 1:19697953‑M1/1‑17 (MQ=255) tGGAGGAAGCCTCACTTtgtactgaccccaaaaag > 1:17425565‑M1/1‑17 (MQ=255) tgggtgcagtacaCTTTCTGCCCAGTCATccacca < 1:1531768‑M2/22‑1 (MQ=255) gggtgcagtacaCTTTCTGCCCAGTCATCCACCaa > 1:9573095‑M2/13‑35 (MQ=255) ggtgcagtacaCTTTCTGCCCAGTCATCCACCaaa > 1:2351296‑M2/12‑35 (MQ=255) tgcagtacaCTTTCTGCCCAGTCATCCACCAaaga < 1:13900448‑M2/26‑1 (MQ=255) gaAGCCTCACTTtgtactgaccccaaaaagttgga > 1:9969419‑M1/1‑12 (MQ=255) gaAGCCTCACTTtgtactgaccccaaaaagttgga < 1:1469018‑M1/35‑24 (MQ=255) gcagtacaCTTTCTGCCCAGTCATCCACCAaagaa > 1:2393980‑M2/9‑35 (MQ=255) gcagtacaCTTTCTGCCCAGTCATCCACCAaagaa > 1:9133667‑M2/9‑35 (MQ=255) aaGCCTCACTTtgtactgaccccaaaaagttggac < 1:4187900‑M1/35‑25 (MQ=255) cagtacaCTTTCTGCCCAGTCATCCACCAaagaag > 1:17722129‑M2/8‑35 (MQ=255) aGCCTCACTTtgtactgaccccaaaaagttggaca > 1:18762546‑M1/1‑10 (MQ=255) aGCCTCACTTtgtactgaccccaaaaagttggaca < 1:18036557‑M1/35‑26 (MQ=255) aGCCTCACTTTCTGCCCAGTCATCCACCAaagaag > 1:4030529/1‑35 (MQ=255) gcatcacTTtgtactgaccccaaaaagttggacag < 1:16596857‑M1/32‑27 (MQ=255) gCCTCACTTtgtactgaccccaaaaagttggacag > 1:11354957‑M1/1‑9 (MQ=255) gCCTCACTTtgtactgaccccaaaaagttggacag < 1:8487066‑M1/35‑27 (MQ=255) gtacaCTTTCTGCCCAGTCATCCACCAaagaagaa < 1:6923071‑M2/30‑1 (MQ=255) gtacaCTTTCTGCCCAGTCATCCACCAaagaagaa > 1:10838891‑M2/6‑35 (MQ=255) ccTCACTTtgtactgaccccaaaaagttggacagt > 1:17872805‑M1/1‑8 (MQ=255) tCACTTtgtactgaccccaaaaagttggacagtta < 1:13239774‑M1/35‑30 (MQ=255) acaCTTTCTGCCCAGTCATCCACCAAAGAAGAAGc < 1:18973625‑M2/32‑1 (MQ=255) acaCTTTCTGCCCAGTCATCCACCAAAGAAGAAGc < 1:8743355‑M2/32‑1 (MQ=255) caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGcc > 1:4622795‑M2/3‑35 (MQ=255) caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGcc < 1:9323085‑M2/33‑1 (MQ=255) caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGcc > 1:20528379‑M2/3‑35 (MQ=255) caCTTTATGCCCAGTCATCCACCAAAGAAGAAGcc < 1:7499478‑M2/33‑1 (MQ=255) aaattgtactgaccccaaaaagttggacagttaaa > 1:16972545‑M1/4‑4 (MQ=255) aCTTtgtactgaccccaaaaagttggacagttaaa < 1:13788786‑M1/35‑32 (MQ=255) aCTTtgtactgaccccaaaaagttggacagttaaa > 1:7884569‑M1/1‑4 (MQ=255) aCTGtgtactgaccccaaaaagttggacagttaaa > 1:1037058‑M1/1‑4 (MQ=255) cTTtgtactgaccccaaaaagttggacagttaaac < 1:643702‑M1/35‑33 (MQ=255) cTTTCTGCCCAGTCATCCACCAAAGAAGAagccag < 1:3788214/35‑1 (MQ=255) aattgtactgaccccaaaaagttggacagttaaac < 1:7369908‑M1/33‑33 (MQ=255) aattgtactgaccccaaaaagttggacagttaaac < 1:14120628‑M1/33‑33 (MQ=255) aattgtactgaccccaaaaagttggacagttaaac < 1:3022153‑M1/33‑33 (MQ=255) tttgtactgaccccaaaaagttggacagttaaaca < 1:8301461‑M1/35‑34 (MQ=255) tttgtactgaccccaaaaagttggacagttaaaca > 1:3406202‑M1/1‑2 (MQ=255) tttCTGCCCAGTCATCCACCCAAGCAGAagccacc > 1:6600989/1‑33 (MQ=25) tttCTGCCCAGTCATCCACCAAAGAAGAagccagc > 1:16258913/1‑35 (MQ=255) attgtactgaccccaaaaagttggacagttaaaca > 1:1981109‑M1/2‑2 (MQ=255) attgtactgaccccaaaaagttggacagttaaaca < 1:9859825‑M1/34‑34 (MQ=255) attgtactgaccccaaaaagttggacagttaaaca > 1:19982592‑M1/2‑2 (MQ=255) ttgtactgaccccaaaaagttggacagttaaacac < 1:19592764‑M1/35‑35 (MQ=255) ttgtactgaccccaaaaagttggacagttaaacac > 1:11165181‑M1/1‑1 (MQ=255) ttgtactgaccccaaaaagttggacagttaaacac > 1:17311254‑M1/1‑1 (MQ=255) | ATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCC > REL606/3015739‑3015807 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |