New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 50078 | 64 (0.620) | 8 (0.100) | 3/38 | NT | 17.8% | coding (77/1332 nt) | yaaU | predicted transporter |
? | REL606 | 558256 = | 23 (0.280) | coding (193/294 nt) | ECB_00516 | conserved hypothetical protein |
CTCTATTCACCGCCGCATTTTGCTGTGGGGAAGCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/50040‑50078 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggGGCGGTTTTGATA > REL606/558256‑558268 CTCTATTCACCGCCGCATTTTGCTGTGGGGAAGCG > 1:13245326/1‑35 CTCTATTCACCGCCGCATTTTGCTGTGGGGAAGCG > 1:6279870/1‑35 TCTATTCACCGCCGCATTTTGCTGTGGGGAAGCGG > 1:17469080/1‑35 TCTATTCACCGCCGCATTTTGCTGTGGGGAAGCGG > 1:3653119/1‑35 CTATTCACCGCCGCATTTTGCTGTGGGGAAGCTGT > 1:9372742/1‑35 TATTCACCGCCGCATTTTGCTGCGGGGAAGCGGTG > 1:18859852/1‑35 ATTCACCGCCGCATTTTGCTGTGGGGAAGCGGTGG > 1:4575987/1‑35 ATTCACCGCCGCATTTTGCTGTGGGGAAGCGGGGG > 1:18229280/1‑35 ATTCACCGCCGCATTTTGCTGTGGGGAAGCGGGGG > 1:19568410/1‑35 TTCACCGCCGCATTTTGCTGTGGGGAAGCGGTGGG > 1:12450493/1‑35 TTCACCGCCGCATTTTGCTGTGGGGAAGCGGTGGG > 1:4075849/1‑35 TCACCGCCGCATTTTGCTGTGGGGAAGCGGTGGGc > 1:19594496/1‑34 TCACCGCCGCATTTTGCTGTGGGGAAGCGGTGGGc > 1:2842859/1‑34 CACCGCCGCATTTTGCTGTGGGGAAGCGGTGGGGC > 1:20483604/1‑35 CACCGCCGCATTTTGCTGTGGGGAAGCGGTGGGGC > 1:15266721/1‑35 ACCGCCGCATTTTGCTGTGGGGAAGCGGTGGGCCG > 1:4781141/1‑35 ACCGCCGCATTTTGCTGTGGGGAAGCGGTGGGCCG > 1:8780214/1‑35 CCGCCGCATTTTGCTGTGGGGAAGCGGTGGGGCcg > 1:1797176/1‑33 CCGCCGCATTTTGCTGTGGGGAAGCGGTGGGCCGG > 1:11043474/1‑35 GCCGCATTTTGCTGTGGGGAAGCGGTGGGGGGGTT > 1:6452171/1‑35 CCGCATTTTGCTGTGGGGAAGCGGTGGGGCGTTTT > 1:14093888/1‑35 CCGCATTTTGCTGTGGGGAAGCGGTGGGGCGGTTT > 1:15668275/1‑35 CCGCATTTTGCTGTGGGGAAGCGGTGGGGCGGTTT > 1:5297900/1‑35 GCATTTTGCTGTGGGGAAGCGGTGGGGCGGTTTTG > 1:2032565/1‑35 GCATTTTGCTGTGGGGAAGCGGTGGGGCGCTTTTG > 1:7678452/1‑35 CATTTTGCTGTGGGGAAGCGGTGGGGCGGTTTTGg > 1:5376979/1‑34 TTTTGCTGTGGGGAAGCGGTGGGGCGGTTTTGggt > 1:3011662/1‑32 CTCTATTCACCGCCGCATTTTGCTGTGGGGAAGCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/50040‑50078 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggGGCGGTTTTGATA > REL606/558256‑558268 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |