New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 615035 | 53 (0.520) | 4 (0.050) | 3/38 | NT | 7.4% | coding (157/198 nt) | ybdD | hypothetical protein |
? | REL606 | = 3625455 | 58 (0.710) | pseudogene (8/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
Only 100 of 225 total aligned reads displayed.
GGTGATGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCATTCACCAATCCCC > REL606/3625421‑3625489 | ggTGATGGTTGTTGTCCCCACGCCTCCCCGccccc < 1:11112202/35‑1 (MQ=255) gTGATGGTTGTTGTCCCCACGCCTCCCCGCCCCCc > 1:6703790‑M2/1‑34 (MQ=255) gTGAT‑GTTGTTGTCCCCACGCCTCCCCGccccccc > 1:8897939/1‑35 (MQ=38) aTGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCTG < 1:14295100‑M1/35‑1 (MQ=255) tGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGC < 1:15659230‑M1/35‑1 (MQ=255) ggTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGCa > 1:20293186/1‑35 (MQ=255) ggTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGCa > 1:8808409/1‑35 (MQ=255) ggTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGCa < 1:12738087/35‑1 (MQ=255) ttgttgTCCCCACGCCTCCCCGCCCCCCCTGCAAt < 1:5818437/35‑1 (MQ=255) ttgtCCCCACGCCTCCCCGCCCCCCCTGCAAT‑ccc > 1:16331640/1‑35 (MQ=255) ttgtCCCCACGCCTCCCCGCCCCCCCTGCAAT‑ccc < 1:6867857/35‑1 (MQ=255) tgtCCCCACGCCTCCCCGCCCCCCCTGCAAT‑CCCa > 1:5542695/1‑35 (MQ=255) gtCCCCACGCCTCCCCGCCCCCCCTGCAAT‑CCCAg > 1:13713402/1‑35 (MQ=255) ccccCCCCCCCCCCCCCCCCCCTGCCATACCCAgg < 1:18873960/35‑2 (MQ=2) ccccCCCCCCCCCCCCCCCCCCTGCCAG‑CCCAgcg < 1:4933935/35‑3 (MQ=0) cccACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTAc < 1:12943112/35‑1 (MQ=255) cccACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTAc < 1:4829961/35‑1 (MQ=255) ccACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACg > 1:12582013/1‑35 (MQ=255) cACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACgg > 1:5716044/1‑35 (MQ=255) aCGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGc < 1:15919240/35‑1 (MQ=255) aCGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGc > 1:2753962/1‑35 (MQ=255) cGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGcc > 1:6062101/1‑35 (MQ=255) gCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCa < 1:7086372/35‑1 (MQ=255) ccTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCAt > 1:19875507/1‑35 (MQ=255) ccCCCCCGCCCCCCctgccaatgtcggatgcggtg > 1:15082620‑M2/1‑14 (MQ=255) cTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCAtt > 1:17119849/1‑35 (MQ=255) cTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCAtt > 1:20456641/1‑35 (MQ=255) tCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCATTc > 1:12908565/1‑35 (MQ=255) cccccgCCCCCCctgccattcaacggttgaaacca > 1:3913297‑M2/2‑12 (MQ=255) ccccccCCCCCCctgccattcaacggttgaaacca > 1:9685832‑M2/2‑12 (MQ=255) ccccccCCCCCCCTGCcattgaaacggatcccggt < 1:1995988‑M1/34‑20 (MQ=255) cccccaCCCCCCctgccaatgtcggatgcggtgcg > 1:9233500‑M2/2‑12 (MQ=255) acccccCCCCCCctgccgcagaagttgattgcgat > 1:8525978‑M2/2‑12 (MQ=255) ccccGCCCCCcctgccgctcacggaaaaactcttc > 1:1813478‑M2/1‑10 (MQ=255) ccccGCCCCCCctgccattcaacggttgaaaccag > 1:9786142‑M2/1‑11 (MQ=255) ccccCCCCCCCctgccgcagaagttgattgcgatg > 1:6320725‑M2/1‑11 (MQ=255) ccccCCCCCCCctgccaatgtcggatgcggtgcga > 1:9065337‑M2/1‑11 (MQ=255) ccccCCCCCCCCTGCcattgaaacggatcccggtg < 1:10625689‑M1/35‑21 (MQ=255) ccccCCCCCCCCTGCcattgaaacggatcccggtg < 1:7546485‑M1/35‑21 (MQ=255) cccGCCCCCCctgccattcaacggttgaaaccagc > 1:6484225‑M2/1‑10 (MQ=255) cccGCCCCCCCTGCAAT‑CCCAGTACGGCCATTCAc > 1:5383051/1‑35 (MQ=255) cccGCCCCCCCTGCAAT‑CCCAGTACGGCCATTCAc > 1:1219027/1‑35 (MQ=255) cccCCCCCCCctgccattcaacggttgaaaccagc > 1:14419950‑M2/1‑10 (MQ=255) cccCCCCCCCCTGCcattgaaacggatcccggtgc < 1:10205387‑M1/35‑22 (MQ=255) ccGCCCCCCctgccaatttcggatgcggtgcgagc > 1:18603571‑M2/1‑9 (MQ=255) ccGCCCCCCctgccaatgtcggatgcggtgcgagc > 1:4660374‑M2/1‑9 (MQ=255) ccGCCCCCCCTGCcattgaaacggatcccggtgca < 1:13469155‑M1/35‑23 (MQ=255) ccGCCCCCCCTGCAAT‑CCCAGTACGGCCATTCAcc > 1:5931982/1‑35 (MQ=255) ccCCCCCCCctgccgcagaagttgattgcgatgga > 1:7292365‑M2/1‑9 (MQ=255) ccCCCCCCCctgccaatgtcggatgcggtgcgagc > 1:14016257‑M2/1‑9 (MQ=255) ccccccccctgccgcagaagttgattgcgatggaa > 1:16029725‑M2/3‑8 (MQ=255) ccccccccctgccacttcaccgtcggcgcgcattt > 1:3463329‑M2/3‑8 (MQ=255) ccccccccctgCcattgaaacggatcccggtgcaa < 1:5069608‑M1/33‑24 (MQ=255) cGCCCCCcctgccgctcacggaaaaactcttcgta > 1:13561984‑M2/1‑7 (MQ=255) cGCCCCCCctgccaatgtcggatgaggtgcgagcg > 1:7155740‑M2/1‑8 (MQ=255) cGCCCCCCCTGCAAT‑CCCAGTACGGCCATTCACCa > 1:4338125/1‑35 (MQ=255) tgcccccctgccattcaacggttgaaaccagcctg > 1:10844572‑M2/3‑7 (MQ=255) gCCCCCCCTGCAAT‑CCCAGTCCGGCCATTCACCaa < 1:10964256/35‑1 (MQ=255) gCCCCCCCTGCAAT‑CCCAGTACGGCCATTCACCaa > 1:9635260/1‑35 (MQ=255) cccccccctgccacttcaccgtcggcgcgcatttc > 1:12664443‑M2/2‑7 (MQ=255) cccccccctGCcattgaaacggatcccggtgcaag < 1:7222412‑M1/34‑25 (MQ=255) cccccccctGCcattgaaacggatcccggtgcaag < 1:2482922‑M1/34‑25 (MQ=255) ccccccctgccacttcaccgtcggcgcgcatttca > 1:19346849‑M2/1‑6 (MQ=255) cccccccTGCcattgaaacggatcccggtgcaagt < 1:13869767‑M1/35‑26 (MQ=255) ctaccctgccgcagaagttgattgcgatggaacct > 1:7797552‑M2/4‑5 (MQ=255) cccccctgccgctcacggaaaaactcttcgtaggt > 1:17514414‑M2/1‑4 (MQ=255) cccccctgccgctcacggaaaaactcttcgtaggt > 1:2966051‑M2/1‑4 (MQ=255) cccccctgccgctcacggaaaaactcttcgtaggt > 1:8050182‑M2/1‑4 (MQ=255) cccccctgccacttcaccgtcggcgcgcatttcaa > 1:8634771‑M2/1‑5 (MQ=255) cccccctgccacttcaccgtcggcgcgcatttcaa > 1:13638740‑M2/1‑5 (MQ=255) cccccctgccacttcaccgtcggcgcgcatttcaa > 1:15449872‑M2/1‑5 (MQ=255) cccccctgccacttcaccgtcggcgcgcatttcaa > 1:8417468‑M2/1‑5 (MQ=255) cccccctgccaatgtcggatgcggtgcgagcgcct > 1:5353572‑M2/1‑5 (MQ=255) ccccccTGCcattgaaacggatcccggtgcaagtg < 1:10130357‑M1/35‑27 (MQ=255) ccccccTGCcattgaaacggatcccggtgcaagtg < 1:376980‑M1/35‑27 (MQ=255) ccccccTGCAAT‑CCCAGTCCGGCCATTCACCAATc < 1:7863695/35‑1 (MQ=255) ccccctgccgctcacggaaaaactcttcgtaggtc > 1:15546750‑M2/1‑3 (MQ=255) ccccctgccgcagaagttgattgcgatggaacctc > 1:16779454‑M2/1‑4 (MQ=255) ccccctgccgcagaagttgattgcgatggaacctc > 1:1693778‑M2/1‑4 (MQ=255) ccccctgccacttcaccgtcggcgcgcatttcaat > 1:3709337‑M2/1‑4 (MQ=255) ccccctgccacttcaccgtcggcgcgcatttcaat > 1:18378869‑M2/1‑4 (MQ=255) ccccctgccaatgtcggatgcggtgcgagcgcctt > 1:19553644‑M2/1‑4 (MQ=255) ccccctgccaatgtcggatgcggtgcgagcgcctt > 1:14884796‑M2/1‑4 (MQ=255) cccccTGCAAT‑CCCAGTACGGCCATTCACCAATcc > 1:13455153/1‑35 (MQ=255) cccctgccgctcacggaaaaactcttcgtaggtca > 1:16848837‑M2/1‑2 (MQ=255) cccctgccgcagaagttgattgcgatggaacctcc > 1:955876‑M2/1‑3 (MQ=255) cccctgccgcagaagttgattgcgatggaacctcc > 1:12878756‑M2/1‑3 (MQ=255) cccctgccattcaacggttgaaaccagcctgctac > 1:19127598‑M2/1‑3 (MQ=255) cccctgccattcaacggttgaaaccagcctgctac > 1:11724850‑M2/1‑3 (MQ=255) cccctgccacttcaccgtcggcgcgcatttcaata > 1:6222435‑M2/1‑3 (MQ=255) cccctgccaatgtcggatgcggtgcgagcgcctta > 1:11311602‑M2/1‑3 (MQ=255) ccccTGCcattgaaacggatcccggtgcaagtgcc < 1:3100798‑M1/35‑29 (MQ=255) ccccTGCcattgaaacggatcccggtgcaagtgcc < 1:17840025‑M1/35‑29 (MQ=255) ccctgccgctcacggaaaaactcttcgtaggtcat > 1:2161037‑M2/1‑1 (MQ=255) ccctgccgcagaagttgattgcgatggaacctcca > 1:16496884‑M2/1‑2 (MQ=255) ccctgccacttcaccgtcggcgcgcatttcaatat > 1:15323672‑M2/1‑2 (MQ=255) cccTGCcattgaaacggatcccggtgcaagtgcct < 1:104660‑M1/35‑30 (MQ=255) cccTGCcattgaaacggatcccggtgcaagtgcct < 1:13326347‑M1/35‑30 (MQ=255) cccTGCAAT‑CCCAGTACGGCCATTCACCAATcccc > 1:9263060/1‑35 (MQ=255) cccGGCAAC‑CCCAGTACGGCCATTCACCAATcccc < 1:17310965/35‑1 (MQ=37) | GGTGATGGTTGTTGTCCCCACGCCTCCCCGCCCCCCCTGCAAT‑CCCAGTACGGCCATTCACCAATCCCC > REL606/3625421‑3625489 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |