New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1157306 = | 35 (0.340) | 4 (0.050) | 4/38 | NT | 11.3% | coding (1631/3186 nt) | rne | fused ribonucleaseE: endoribonuclease/RNA‑binding protein/RNA degradosome binding protein |
? | REL606 | = 1452435 | 35 (0.430) | intergenic (‑244/‑14) | acpD/hrpA | acyl carrier protein phosphodiesterase/ATP‑dependent helicase |
CTTTGCCATGCCGGATGTGCCGCCAGCGCCAACCCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1157344‑1157306 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcCGCTGCTGCAAGGCCGTAAAGGTCAATTTTTGTT < REL606/1452435‑1452402 CTTTGCCATGCCGGATGTGCCGCCAGCGCCAACCC > 1:7541091/1‑35 TTTGCCATGCCGGATGTGCCGCCAGCGCCAACCCC > 1:10282812/1‑35 TTTGCCATGCCGGATGTGCCGCCAGCGCCAACCCC > 1:10613217/1‑35 TTGCCATGCCGGATGTGCCGCCAGCGCCAACCCCA > 1:12330622/1‑35 TGCCATGCCGGATGTGCCGCCAGCGCCAACCCCAG > 1:15658197/1‑35 GCCATGCCGGATGTGCCGCCAGCGCCAACCCCAGC > 1:12496766/1‑35 GCCACCGCCAACCCCAGCCGCTGCTGCAAGGCCGT < 1:19635032/35‑1 CCACCGCCAACCCCAGCCGCTGCTGCAAGGCCGTA < 1:1348160/35‑1 CAGCGCCACCCCCAGCCGCTGCTGCAAGGCCGTAA < 1:8612109/35‑1 cagCAACCCCAGCCGCTGCTGCAAGGCCGTAAAGG < 1:9022777/32‑1 CGCCAACCCCAGCCGCTGCTGCAAGGCCGTAAAGG < 1:5710349/35‑1 gaaCCCAGCCGCTGCTGCAAGGCCGTAAAGGTCAA < 1:6950465/32‑1 AACCCCAGCCGCTGCTGCAAGGCCGTAAAGGTCAA < 1:11632577/35‑1 AACCCCAGCCGCTGCTGCAAGGCCGTAAAGGTCAA < 1:14829150/35‑1 AACCCCAGCCGCTGCTGCAAGGCCGTAAAGGTCAA < 1:20529202/35‑1 cCCCCAGCCGCTGCTGCAAGGCCGTAAAGGTCAAT < 1:14297942/34‑1 ACCCCAGCCGCTGCTGCAAGGCCGTAAAGGTCAAT < 1:12833508/35‑1 ACCCCAGCCGCTGCTGCAAGGCCGTAAAGGTCAAT < 1:7036638/35‑1 ACCCCAGCCGCTGCTGCAAGGCCGTAAAGGTCAAT < 1:2050457/35‑1 CCCCAGCCGCTGCTGCAAGGCCGTAAAGGTCAATT < 1:8571796/35‑1 CCCCAGCCGCTGCTGCAAGGCCGTAAAGGTCAATT < 1:11749525/35‑1 CCCAGCCGCTGCTGCAAGGCCGTAAAGGTCAATTT < 1:10837843/35‑1 CCCAGCCGCTGCTGCAAGGCCGTAAAGGTCAATTT < 1:20085705/35‑1 CCAGCCGCTGCTGCAAGGCCTTAAAGGTCAATTTT > 1:3542467/1‑35 CCAGCCGCTGCTGCAAGGCCGTAAAGGTCAATTTT < 1:3459593/35‑1 CCAGCCGCTGCTGCAAGGCCGTAAAGGTCAATTTT < 1:5563369/35‑1 CCAGCCGCTGCTGCAAGGCCGTAAAGGTCAATTTT < 1:8519525/35‑1 cacCCGCTGCTGCAAGGCCGTAAAGGTCAATTTTT < 1:3891892/32‑1 CAGCCGCTGCTGCAAGGCCGTAAAGGTCAATTTTT > 1:18472557/1‑35 AGCCGCTGCTGCAAGGCCGTAAAGGTCAATTTTTG > 1:6516239/1‑35 cCCGCTGCTGCAAGGCCGTAAAGGTCAATTTTTGT < 1:15746550/34‑1 GCCGCTGCTGCAAGGCCGTAAAGGTCAATTTTTGT > 1:1735460/1‑35 GCCGCTGCTGCAAGGCCGTAAAGGTCAATTTTTGT < 1:11480904/35‑1 CCGCTTCTGCAAGGCCGTAAAGGTCAATTTTTGTT < 1:6379086/35‑1 CCGCTGCTGCAAGGCCGTAAAGGTCAATTTTTGTT < 1:18406681/35‑1 CCGCTGCTGCAAGGCCGTAAAGGTCAATTTTTGTT < 1:7121499/35‑1 CCGCTGCTGCAAGGCCGTAAAGGTCAATTTTTGTT > 1:5939704/1‑35 CCGCTGCTGCAAGGCCGTAAAGGTCAATTTTTGTT < 1:11566845/35‑1 CCGCTGCTGCAAGGCCGTAAAGGTCAATTTTTGTT > 1:19163935/1‑35 CTTTGCCATGCCGGATGTGCCGCCAGCGCCAACCCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1157344‑1157306 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcCGCTGCTGCAAGGCCGTAAAGGTCAATTTTTGTT < REL606/1452435‑1452402 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |