New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3656754 = | 92 (0.900) | 4 (0.070) | 3/28 | NT | 7.1% | coding (410/996 nt) | yiaH | conserved inner membrane protein |
? | REL606 | = 4045305 | 51 (0.850) | coding (165/1407 nt) | yihP | predicted transporter |
AATCACTACCATTAGTACCAGCAACATTTTTCCGCCGACGTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3656797‑3656754 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgacgttctGGGGCTGCCAGGCACCTATGGCGGCATTATCTTT < REL606/4045305‑4045272 AATCCCTACCATTAGTACCAGCAACATTTTTCCGC < 1:2391377/35‑1 AATCACTACCATTAGTACCAGCAACATTTTTCCGC > 1:3947711/1‑35 ATCATTACCATTAGTACCAGCAACATTTTTCCGCC > 1:6765497/1‑35 ATCACTACCATTAGTACCAGCAACATTTTTCCGCC > 1:9799217/1‑35 cccCTACCATTAGTACCAGCAACATTTTTCCGCCG < 1:19237639/32‑1 cccCTACCATTAGTACCAGCAACATTTTTCCGCCG < 1:9105539/32‑1 ccCTACCATTAGTACCAGCAACATTTTTCCGCCGA < 1:6682389/33‑1 CACTACCATTAGTACCAGCAACATTTTTCCGCCGA > 1:8068441/1‑35 ACTACCATTAGTACCAGCAACATTTTTCCGCCGAC > 1:493200/1‑35 CTACCATTAGTACCAGCAACATTTTTCCGCCGACG > 1:19682419/1‑35 CTACCATTAGTACCAGCAACATTTTTCCGCCGACG > 1:20393221/1‑35 CTACCATTAGTACCAGCAACATTTTTCCGCCGACG > 1:18261404/1‑35 CTACCATTAGTACCAGCAACATTTTTCCGCCGACG < 1:4981091/35‑1 CTACCATTAGTACCAGCAACATTTTTCCGCCGACG < 1:10601048/35‑1 CTACCATTAGTACCAGCAACATTTTTCCGCCGACG > 1:935486/1‑35 CTACCATTAGTACCAGCAACATTTTTCCGCCGACG > 1:876500/1‑35 TACCATTAGTACCAGCAACATTTTTCCGCCGACGT > 1:1715408/1‑35 ACCATTAGTACCAGCAACATTTTTCCGCCGACGTT > 1:19822027/1‑35 ACCATTAGTACCAGCAACATTTTTCCGCAGACGTT < 1:6878230/35‑1 CCATTAGTCCCAGCAACATTTTTCCGCCGACGTTC < 1:2163706/35‑1 CCATTAGTACCAGCAACATTTTTCCGCCGCCGTTC > 1:16427855/1‑35 CCATTAGTACCAGCAACATTTTTCCGCCGACGTTC < 1:16706530/35‑1 CCATTAGTACCAGCAACATTTTTCCGCCGACGTTC > 1:2604825/1‑35 CCATTAGTACCAGCAACATTTTTCCGCCGACGTTC > 1:1491891/1‑35 CCATTAGTACCAGCAACATTTTTCCGCCGACGTTC < 1:13692086/35‑1 CATTAGTCCCAGCAACATTTTTCCGCCGACGTTCT < 1:16118515/35‑1 CATTAGTACCAGCAACATTTTTCCGCCGACGTTCT > 1:2513690/1‑35 CATTAGTACCAGCAACATTTTCCCGCCGACGTTCT < 1:2942341/35‑1 TTTTTCCCCCGACGTTCTGGGGCTGCCAGGCACCT < 1:5868579/35‑1 TTTTCCCCCGACGTTCTGGGGCTGCCAGGCACCTA < 1:7237962/35‑1 TTTTCCCCCGACGTTCTGGGGCTGCCAGGCACCTA < 1:10969683/35‑1 TTTCCCCCGACGTTCTGGGGCTGCCAGGCACCTAT < 1:3516354/35‑1 TTCCCCCGACGTTCTGGGGCTGCCAGGCACCTATG < 1:12473131/35‑1 accCCGACGTTCTGGGGCTGCCAGGCACCTATGGC < 1:5760073/32‑1 accCCGACGTTCTGGGGCTGCCAGGCACCTATGGC < 1:17194179/32‑1 ccCCGACGTTCTGGGGCTGCCAGGCACCTATGGCG < 1:18236714/33‑1 ccCCGACGTTCTGGGGCTGCCAGGCACCTATGGCG < 1:4042087/33‑1 ccCCGACGTTCTGGGGCTGCCAGGCACCTATGGCG < 1:2699706/33‑1 acCCGACGTTCTGGGGCTGCCAGGCACCTATGGCG < 1:1913319/33‑1 cCCGACGTTCTGGGGCTGCCAGGCACCTATGGCGG < 1:9891996/34‑1 cCCGACGTTCTGGGGCTGCCAGGCACCTATGGCGG < 1:2874248/34‑1 cCCGACGTTCTGGGGCTGCCAGGCACCTATGGCGG < 1:16348443/34‑1 cCCGACGTTCTGGGGATGCCAGGCACCTATGGCGG < 1:15061927/34‑1 CCGACGTTCTGGGGCTGCCAGGCACCTATGGCGGg > 1:18272024/1‑34 CGACGTTCTGGGGCTGCCAGGCACCTATGGCGGgg > 1:7387351/1‑33 CGACGTTCTGGGGCTGCCAGGCACCTATGGCGGCA < 1:6172956/35‑1 CGACGTTCTGGGGCTGCCAGGCACCTATGGCGGCA < 1:20328470/35‑1 CGACGTTCTGGGGCTGCCAGGCACCTATGGCGGCA < 1:828138/35‑1 GACGTTCTGGGGCTGCCAGGCACCTATGGGGGCAT < 1:6320245/35‑1 GACGTTCTGGGGCTGCCAGGCACCTATGGCGGggg > 1:7821823/1‑32 GACGTTCTGGGGCTGCCAGGCACCTATGGCGGggg > 1:5743883/1‑32 GACGTTCTGGGGCTGCCAGGCACCTATGGCGGggg > 1:3915377/1‑32 GACGTTCTGGGGCTGCCAGGCACCTATGGCGGggg > 1:4068314/1‑32 GACGTTCTGGGGCTGCCAGGCACCTATGGCGGggc > 1:5120442/1‑32 GACGTTCTGGGGCTGCCAGGCACCTATGGCGGCAT < 1:11563066/35‑1 GACGTTCTGGGGCTGCCAGGCACCTATGGCGGCAT < 1:13414611/35‑1 GACGTTCTGGGGCTGCCAGGCACCTATGGCGGCAT < 1:13451379/35‑1 GACGTTCTGGGGCTGCCAGGCACCTATGGCGGCAT < 1:9268650/35‑1 GACGTTCTGGGGCTGCCAGGCACCTATGGCGGCAT < 1:19506456/35‑1 GACGTTCTGGGGCTGCCAGGCACCTATGGCGGCAT < 1:19362577/35‑1 GACGTTCTGGGGCTGCCAGGCACCTATGGCGGCAT < 1:16844323/35‑1 ACGTTCTGGGGCTGCCAGGCACCTATGGCGGCATT < 1:1094176/35‑1 ACGTTCTGGGGCTGCCAGGCACCTATGGCGGCATT < 1:16041242/35‑1 ACGTTCTGGGGCTGCCAGGCACCTATGGCGGCATT < 1:16825966/35‑1 ACGTTCTGGGGCTGCCAGGCACCTATGGCGGCATT < 1:12176396/35‑1 CGTTCTGGGGCTGCCAGGCACCTATGGCGGCATTA < 1:11297063/35‑1 CGTTCTGGGGCTGCCAGGCACCTATGGCGGCATTA < 1:13663131/35‑1 CGTTCTGGGGCTGCCAGGCACCTATGGCGGCATTA < 1:8674602/35‑1 CGTTCTGGGGCTGCCAGGCACCTATGGCGGCATTA < 1:2098833/35‑1 GTTCTGGGGCTGCCAGGCACCTATGGCGGCATTAT < 1:8262233/35‑1 GTTCTGGGGCTGCCAGGCACCTATGGCGGCATTAT < 1:11811635/35‑1 GTTCTGGGGCTGCCAGGCACCTATGGCGGCATTAT < 1:16090883/35‑1 GTTCTGGGGCTGCCAGGCACCTATGGCGGCATTAT < 1:15830959/35‑1 GTTCTGGGGCTGCAAGGCACCTATGGCGGCATTAT < 1:12252997/35‑1 TTCTGGGGCTGCCAGGCACCTATGGCGGCATTATC < 1:17993828/35‑1 TTCTGGGGCTGCCAGGCACCTATGGCGGCATTATC < 1:9287825/35‑1 TCTGGGGCTGCCAGGCACCTATGGCGGCATTATCT < 1:11542982/35‑1 TCTGGGGCTGCCAGGCACCTATGGCGGCATTATCT < 1:11462184/35‑1 TCTGGGGCTGCCAGGCACCTATGGCGGCATTATCT < 1:14318973/35‑1 TCTGGGGCTGCCAGGAACCTATGGCGGCATTATCT < 1:1534504/35‑1 CTGGGGCTGCCAGGCACCTATGGCGGCATTATCTT < 1:736012/35‑1 CTGGGGCTGCCAGGCACCTATGGCGGCATTATCTT < 1:10948748/35‑1 TGGGGCTGCCAGGCACCTATGGCGGCATTATCTTT < 1:6701251/35‑1 TGGGGCTGCCAGGCACCTATGGCGGCATTATCTTT < 1:12847364/35‑1 TGGGGCTGCCAGGCACCTATGGCGGCATTATCTTT < 1:6395353/35‑1 TGGGGCTGCCAGGCACCTATGGCGGCATTATCTTT < 1:16584042/35‑1 TGGGGCTGCCAGGCACCTATGGCGGCATTATCTTT < 1:324298/35‑1 AATCACTACCATTAGTACCAGCAACATTTTTCCGCCGACGTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3656797‑3656754 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgacgttctGGGGCTGCCAGGCACCTATGGCGGCATTATCTTT < REL606/4045305‑4045272 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |