New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2017683 | 35 (0.340) | 14 (0.170) | 3/38 | NT | 18.8% | intergenic (‑178/+89) | yeeF/yeeY | predicted amino‑acid transporter/predicted DNA‑binding transcriptional regulator |
? | REL606 | = 2919373 | 93 (1.140) | intergenic (+6/+37) | idi/lysS | isopentenyl‑diphosphate delta‑isomerase/lysine tRNA synthetase, constitutive |
Only 100 of 205 total aligned reads displayed.
TGTTGTCTGCTTTCGCGCAGCACAATTAAAAAACCCCGACATTTGCCGGGGTTATGAGCATAACGTAAT > REL606/2919339‑2919407 | nttgtCNGCTTTCGCGCAGCACAATTAAAAAACCc > 1:516685‑M2/1‑34 (MQ=255) gttgtCTGCTTTCGCGCAGCACAATTAAAAAACCc > 1:18655976‑M2/1‑34 (MQ=255) ttgtCTGCTTTCGCGCAGCACAATTAAAAAACCcc > 1:4083073‑M2/1‑33 (MQ=255) ttgtCTGCTTTCGCGCAGCACAATTAAAAAACCcc > 1:17716208‑M2/1‑33 (MQ=255) ttgtCTGCTTTCGCGCAGCACAATTAAAAAACCcc > 1:10960839‑M2/1‑33 (MQ=255) ttgtCTGCTTTCGCGCAGCACAATTAAAAAACCcc < 1:18486562‑M2/35‑3 (MQ=255) tgtCTGCTTTCGCGCAGCACAATTAAAAAACCccg > 1:9081978‑M2/1‑32 (MQ=255) tgtCTGCTTTCGCGCAGCACAATTAAAAAACCccg > 1:1509111‑M2/1‑32 (MQ=255) tgtCTGCTTTCGCGCAGCACAATTAAAAAACCccg > 1:10309701‑M2/1‑32 (MQ=255) gtCTGCTTTCGCGCAGCACAATTAAAAAACCccga > 1:8672898‑M2/1‑31 (MQ=255) gtCTGCTTTCGCGCAGCACAATTAAAAAACCccga < 1:9505922‑M2/35‑5 (MQ=255) tCTGCTTTCGCGCAGCACAATTAAAAAACCccgcc < 1:2271413‑M2/35‑6 (MQ=255) tCTGCTTTCGCGCAGCACAATTAAAAAACCccgac < 1:3834622‑M2/35‑6 (MQ=255) tCTGCTTTCGCGCAGCACAATTAAAAAACCccgac < 1:18209017‑M2/35‑6 (MQ=255) tCTGCTTTCGCGCAGCACAATTAAAAAACCccgac > 1:17968062‑M2/1‑30 (MQ=255) cTGCTTTCGCGCAGCACAATTAAAAAACCCCGACa < 1:17448669/35‑1 (MQ=255) tGCTTTCGCGCAGCACAATTAAAAAACCCCGACAt < 1:11268090/35‑1 (MQ=255) tGCTTTCGCGCAGCACAATTAAAAAACCCCGACAt > 1:8770130/1‑35 (MQ=255) gCTTTCGCGCAGCACAATTAAAAAACCCCGACAtt > 1:20145939/1‑35 (MQ=255) gCTTTCGCGCAGCACAATTAAAAAACCCCGACAtt > 1:16626300/1‑35 (MQ=255) cTTTCGCGCAGCACAATTAAAAAACCCCGACAttt > 1:10659797/1‑35 (MQ=255) tttCGCGCAGCACAATTAAAAAACCCCGACATTTg > 1:3404213/1‑35 (MQ=255) ttCGCGCAGCACAATTAAAAAACCCCGACATTTGc < 1:4807293/35‑1 (MQ=255) ttCGCGCAGCACAATTAAAAAACCCCGACATTTGc < 1:5078045/35‑1 (MQ=255) tCGCGCAGCACAATTAAAAAACCCCGACATTTGcc > 1:19433446/1‑35 (MQ=255) tCGCGCAGCACAATTAAAAAACCCCGACATTTGcc > 1:19087510/1‑35 (MQ=255) tCGCGCAGCACAATTAAAAAACCCCGACATTTGcc > 1:17569040/1‑35 (MQ=255) tCGCGCAGCACAATTAAAAAACCCCGACATTTGcc < 1:12189746/35‑1 (MQ=255) tCGCGCAGCACAATTAAAAAACCCCGACAATTGcc > 1:6526893/1‑35 (MQ=255) gcgcaCAGCGCAATTAAAAACCCCCGACATTTGca < 1:19754153/34‑2 (MQ=21) cgcgCAGCACAATTAAAAAACCCCGACATTTGCCg < 1:9815556/35‑1 (MQ=255) gcgcAGCACAATTAAAAAACCCCGACATTTGCCgg > 1:14141216/1‑35 (MQ=255) gcgcAGCACAATTAAAAAACCCCGACATTTGCCgg < 1:5230076/35‑1 (MQ=255) gcgcAGCACAATTAAAAAACCCCGACATTTGCCgg > 1:680929/1‑35 (MQ=255) gcgcAGCACAATTAAAAAACCCCGACATTTGCCgg > 1:8033055/1‑35 (MQ=255) gcgcAGCACAATTAAAAAACCCCGACATTTGCCgg < 1:11546318/35‑1 (MQ=255) cgcAGCACAATTAAAAAACCCCGACATTTGCCggg > 1:313340/1‑35 (MQ=255) cgcAGCACAATTAAAAAACCCCGACATTTGCCggg > 1:7137192/1‑35 (MQ=255) gcagcaCAATTAAAAAACCCCGACATTTGCCgggg > 1:3949595/1‑35 (MQ=255) gcagcaCAATTAAAAAACCCCGACATTTGCCgggg < 1:1321207/35‑1 (MQ=255) gcagcaCAATTAAAAAACCCCGACATTTGCCgggg > 1:12417305/1‑35 (MQ=255) cagcaCAATTAAAAAACCCCGACATTTGCCGGGGt > 1:2022735/1‑35 (MQ=255) cagcaCAATTAAAAAACCCCGACATTTGCCGGGGt > 1:4300800/1‑35 (MQ=255) cagcaCAATTAAAAAACCCCGACATTTGCCGGGGt > 1:10181448/1‑35 (MQ=255) cagcaCAATTAAAAAACCCCGACATTTGCCGGGGt > 1:13346746/1‑35 (MQ=255) cagcaCAATTAAAAAACCCCGACATTTGCCGGGGt < 1:12536849/35‑1 (MQ=255) agcaCAATTAAAAAACCCCGACATTTGCCGGGGtt > 1:4652733/1‑35 (MQ=255) agcaCAATTAAAAAACCCCGACATTTGCCGGGGtt < 1:7753294/35‑1 (MQ=255) agcaCAATTAAAAAACCCCGACATTTGCCGGGGtt > 1:11696391/1‑35 (MQ=255) agcaCAATTAAAAAACCCCGACATTTGCCGGGGtt > 1:11613087/1‑35 (MQ=255) gcaCAATTAAAAAACCCCGACATTTGCCGGGGTTa > 1:16503409/1‑35 (MQ=255) gcaCAATTAAAAAACCCCGACATTTGCCGGGGTTa < 1:6896249/35‑1 (MQ=255) cacaATTAAAAAACCCCGACATTTGCCGGGGTTAt < 1:10457069/35‑1 (MQ=255) cacaATTAAAAAACCCCGACATTTGCCGGGGTTAt > 1:8987397/1‑35 (MQ=255) acaATTAAAAAACCCCTACATTTGCCGGGGTTATg > 1:15535913/1‑35 (MQ=255) acaATTAAAAAACCCCGACATTTGCCGGGGTTATg > 1:13383305/1‑35 (MQ=255) acaATTAAAAAACCCCGACATTTGCCGGGGTTATg > 1:3496873/1‑35 (MQ=255) acaATTAAAAAACCCCGACATTTGCCGGGGTTATg < 1:2483878/35‑1 (MQ=255) acaATTAAAAAACCCAGACATTTGCCGGGGTTATg < 1:14503264/35‑1 (MQ=255) caATTAAAAAACCCCGACATTTGCCGGGGTTATGa > 1:11249853/1‑35 (MQ=255) caATTAAAAAACCCCGACATTTGCCGGGGTTATGa < 1:787819/35‑1 (MQ=255) caATTAAAAAACCCCGACATTTGCCGGGGTTATGa > 1:19146895/1‑35 (MQ=255) aaTTAAAAAACCCCGACATTTGCCGGGGTTATGAg < 1:19625607/35‑1 (MQ=255) aTTAAAAACCCCCGACATTTGCCGGGGTTATGAGc < 1:16824760/35‑1 (MQ=255) aTAAAAAAACCccgacgtttcatcagcgtcggtta > 1:3743737‑M2/1‑11 (MQ=255) ttAAAAAACCCCGACATTTGCCGGGGTTATGAGCa < 1:9401616/35‑1 (MQ=255) ttAAAAAACCCCGACATTTGCCGGGGTTATGAGCa < 1:18605749/35‑1 (MQ=255) caaaaacCccgacgtttcatcagcgtcggttattt > 1:11931193‑M2/2‑8 (MQ=255) acaaaaccccgacgtttcatcagcgtcggttattt > 1:5508404‑M2/3‑8 (MQ=255) aaaaaaCCccgacgtttcatcagcgtcggttattt > 1:3466032‑M2/1‑8 (MQ=255) aaaaaaCCCCGACATTTGCCGGGGTTATGAGCATa > 1:14309326/1‑35 (MQ=255) caaaaaCccgacgtttcatcagcgtcggttatttt > 1:18455566‑M2/2‑7 (MQ=255) aaaaaCCccgacgtttcatcagcgtcggttatttt > 1:14657661‑M2/1‑7 (MQ=255) aaaaaCCccgacgtttcatcagcgtcggttatttt > 1:16352585‑M2/1‑7 (MQ=255) aaaaaCCccgacgtttcatcagcgtcggttatttt > 1:8859657‑M2/1‑7 (MQ=255) aaaaaCCCCGACATTTGCCGGGGTTATGAGCATaa < 1:14102632/35‑1 (MQ=255) aaaaaCCCCGACATTTGCCGGGGTTATGAGCATaa < 1:14922607/35‑1 (MQ=255) aaaaCCCCGACATTTGCCGGGGTTATGAGCATAAc > 1:9228494/1‑35 (MQ=255) aaaaCCCCGACATTTGCCGGGGTTATGAGCATAAc > 1:8338417/1‑35 (MQ=255) aaaaCCCCGACATTTGCCGGGGTTATGAGCATAAc < 1:1134482/35‑1 (MQ=255) aaaCCccgacgtttcatcagcgtcggttatttttt > 1:13783270‑M2/1‑5 (MQ=255) aaaCCCCGACATTTGCCGGGGTTATGAGCATAACg > 1:16065150/1‑35 (MQ=255) aaaCCCCGACATTTGCCGGGGTTATGAGCATAACg < 1:7536420/35‑1 (MQ=255) aaaCCCCGACATTTGCCGGGGTTATGAGCATAACg < 1:5071689/35‑1 (MQ=255) aaCCccgacgtttcatcagcgtcggttattttttg > 1:19347786‑M2/1‑4 (MQ=255) aaCCCCGACATTTGCCGGGGTTATGAGCATAACGt < 1:18381501/35‑1 (MQ=255) aaCCCCGACATTTGCCGGAGTTATGAGCATAACGt < 1:13246171/35‑1 (MQ=255) aCCCGGACATTTGCCGGGGTTATGAGCATAACGTa < 1:5694477/35‑1 (MQ=255) aCCCCGACATTTGCCGGGGTTATGAGCATAACGTa < 1:2152027/35‑1 (MQ=255) aCCCCGACATTTGCCGGGGTTATGAGCATAACGTa > 1:1535630/1‑35 (MQ=255) aCCCCGACATTTGCCGGGGTTATGAGCATAACGTa > 1:6643118/1‑35 (MQ=255) aCCCCGACATTTGCCGGGGTTATGAGCATAACGTa > 1:5945593/1‑35 (MQ=255) aCCCCGACATTTGCCGGGGTTATGAGCATAACGTa > 1:5549106/1‑35 (MQ=255) ccccgacgtttcatcagcgtcggttattttttgct > 1:6752896‑M2/1‑2 (MQ=255) ccccgacgtttcatcagcgtcggttattttttgct > 1:14884115‑M2/1‑2 (MQ=255) ccccgacgtttcataagcgtcggttattttttgct > 1:2782853‑M2/1‑2 (MQ=255) ccccGACATTTGCCGGGGTTATGAGCATAACGTaa > 1:20462555/1‑35 (MQ=255) ccccGACATTTGCCGGGGTTATGAGCATAACGTaa < 1:18812732/35‑1 (MQ=255) ccccGACATTTGCCGGGGTTATGAGCATAACGTaa < 1:14018188/35‑1 (MQ=255) cccGACATTTGCCGGGGTTATGAGCATAACGTAAt < 1:16862292/35‑1 (MQ=255) | TGTTGTCTGCTTTCGCGCAGCACAATTAAAAAACCCCGACATTTGCCGGGGTTATGAGCATAACGTAAT > REL606/2919339‑2919407 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |