New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1004939 = | 65 (0.630) | 15 (0.180) | 5/40 | NT | 19.2% | coding (1138/1401 nt) | asnS | asparaginyl‑tRNA synthetase |
? | REL606 | 1339539 = | 72 (0.840) | coding (610/1170 nt) | yciM | hypothetical protein |
Only 100 of 157 total aligned reads displayed.
CAGCGACGATCTCGATCGTGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAACAGCGCCCG > REL606/1339505‑1339573 | cgccttaacgaagacggtaaaaccgttgcggctaa > 1:10920229‑M2/35‑35 (MQ=255) cgccttaacgaagacggtaaaaccgttgcggctaa > 1:18870936‑M2/35‑35 (MQ=255) cgccttaacgaagacggtaaaaccgttgcggctaa > 1:12651748‑M2/35‑35 (MQ=255) cAGCGACGATCTCGATCGTGCCATGACCTTGCTaa < 1:12282428/35‑1 (MQ=255) gccttaacgaagactgtaaaaccgttgcggctaaa > 1:8482125‑M2/34‑35 (MQ=255) gccttaacgaagacggtaaaaccgttgcggctaaa > 1:4295859‑M2/34‑35 (MQ=255) aGCGACGATCTCGATCGTGCCATGACCTTGCTaaa > 1:20152597/1‑35 (MQ=255) gCGACGATCTCGATCGTGCCATGACCTTGCTaaaa > 1:693554/1‑35 (MQ=255) ccttaacgaatacggtaaaaccgttgcggctaaaa > 1:11400412‑M2/33‑35 (MQ=255) ccttaacgaagacggtaaaaccgttgcggctaaaa > 1:12795527‑M2/33‑35 (MQ=255) cttaacgaagacggtaaaaccgttgcggctaaaaa > 1:2672908‑M2/32‑35 (MQ=255) cgacgaTCTCGATCGTGCCATGACCTTGCTaaaaa < 1:16962018/35‑1 (MQ=255) cgacgaTCTCGATCGTGCCATGACCTTGCTaaaaa > 1:18028784/1‑35 (MQ=255) ttaacgaagacggtaaaaccgttgcggctaaagaa > 1:1589813‑M2/31‑35 (MQ=255) ttaacgaagacggtaaaaccgttgcggctaaaaaa > 1:910705‑M2/31‑35 (MQ=255) gacgaTCTCGATCGTGCCATGACCTTGCTaaaaaa > 1:19216209/1‑35 (MQ=255) gacgaTCTCGATCGTGCCATGACCTTGCTaaaaaa > 1:14545827/1‑35 (MQ=255) taacgaagacggtaaaaccgttgcggctaaaaaaa > 1:18681435‑M2/30‑35 (MQ=255) acgaTCTCGATCGTGCCATGACCTTGCTaaaaaaa > 1:20461054/1‑35 (MQ=255) cgaTCTCGATCGTGCCATGACCTTGCTAAAAAAAg > 1:3636042/1‑35 (MQ=255) aacgaagacggtaaaaccgttgcggctaaaaaagg > 1:10963992‑M2/29‑33 (MQ=255) aacgaagacggtaaaaccgttgcggctaaaaaaaa > 1:20144081‑M2/29‑34 (MQ=255) aacgaagacggtaaaaccgttgcggctaaaaaaaa > 1:1840674‑M2/29‑34 (MQ=255) gaTCTCGATCGTGCCATGACCTTGCTAAAAAAAgg > 1:11312800/1‑35 (MQ=255) gaTCTCGATCGTGCCATGACCTTGCTAAAAAAAgg > 1:10438321/1‑35 (MQ=255) acgaagacggtaaaaccgttgcggctaAAAAAAgg > 1:6168927‑M2/28‑35 (MQ=255) aTCTCGATCGTGCCATGACCTTGCTAAAAAAAggg > 1:19727222/1‑35 (MQ=255) aTCTCGATCGTGCCATGACCTTGCTAAAAAAAggg > 1:2654611/1‑35 (MQ=255) aTCTCGATCGTGCCATGACCTTGCTAAAAAAAggg < 1:3915075/35‑1 (MQ=255) aTCTCGATCGTGCCATGAACTTGCTAAAAAAAggg < 1:3489261/35‑1 (MQ=255) tctcGATCGTGCCATGACCTTGCTAAAAAAAgggg > 1:2260694/1‑35 (MQ=255) gaagacggtaaaaccgttgcggctaAAAAAAaggg > 1:5460775‑M2/26‑35 (MQ=255) ctcGATCGTGCCATGACCTTGCTAAAAAAAGGggc > 1:15282837/1‑35 (MQ=255) ctcGATCGTGCCATGACCTTGCTAAAAAAAGGggc < 1:3622526/35‑1 (MQ=255) ctcGATCGTGCCATGACCTTGCTAAAAAAAGGggc > 1:8026499/1‑35 (MQ=255) tcGATCGTGCCATTACCTTGCTAAAAAAAGGggcg > 1:6518590/1‑35 (MQ=255) tcGATCGTGCCATGACCTTGCTAAAAAAAGGggcg > 1:14844854/1‑35 (MQ=255) tcGATCGTGCCATGACCTTGCTAAAAAAAGGggcg < 1:14832818/35‑1 (MQ=255) tcGATCGTGCCATGACCTTGCTAAAAAAAGGggcg < 1:12724179/35‑1 (MQ=255) agacggtaaaaccgttgcggctaAAAAaaggggtg > 1:2261549‑M2/24‑33 (MQ=255) gacggtaaaaccgttgcggctaAAAAAAGGggggg > 1:7033477‑M2/23‑35 (MQ=255) cGATCGTGCCATGACCTTGCTAAAAAAAGGggcgg < 1:17773949/35‑1 (MQ=255) cGATCGTGCCATGACCTTGCTAAAAAAAGGggcgg < 1:6313505/35‑1 (MQ=255) cGATCGTGCCATGACCTTGCTAAAAAAAGGggcgg < 1:6878169/35‑1 (MQ=255) gATCGTGCCATGACCTTGCTAAAAAAAGGggcggc < 1:15454483/35‑1 (MQ=255) gATCGTGCCATGACCTTGCTAAAAAAAGGggcggc > 1:812742/1‑35 (MQ=255) gATCGTGCCATGACCTTGCTAAAAAAAGGggcggc > 1:5989548/1‑35 (MQ=255) aTCGTGCCATGACCTTGCTAAAAAAAGGggcggcg < 1:17658327/35‑1 (MQ=255) aTCGTGCCATGACCTTGCTAAAAAAAGGggcggcg < 1:8614839/35‑1 (MQ=255) aTCGTGCCATGACCTTGCTAAAAAAAGGggcggcg < 1:11611127/35‑1 (MQ=255) cGTGCCATGACCTTGCTAAAAAAAGGggcggcggc > 1:17464285/1‑35 (MQ=255) cGTGCCATGACCTTGCTAAAAAAAGGggcggcggc < 1:18478488/35‑1 (MQ=255) cGTGCCATGACCTTGCTAAAAAAAGGggcggcggc < 1:16387419/35‑1 (MQ=255) gTGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCa < 1:4108449/35‑1 (MQ=255) gTGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCa > 1:12918215/1‑35 (MQ=255) gTGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCa > 1:4300621/1‑35 (MQ=255) tGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAg > 1:10103874/1‑35 (MQ=255) tGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAg < 1:12090051/35‑1 (MQ=255) tGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAg > 1:6312859/1‑35 (MQ=255) gCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAGa < 1:12152480/35‑1 (MQ=255) gCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAGa < 1:11052431/35‑1 (MQ=255) gCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAGa > 1:10482669/1‑35 (MQ=255) ccATGACCTTGCTAAAAAAAGGGGCGGCGGCAGAt > 1:2366080/1‑35 (MQ=255) ccATGACCTTGCTAAAAAAAGGGGCGGCGGCAGAt > 1:14556055/1‑35 (MQ=255) cATGACCTTGCTAAAAAAAGGGGCGGCGGCAGATa > 1:11787317/1‑35 (MQ=255) cATGACCTTGCTAAAAAAAGGGGCGGCGGCAGATa < 1:7725668/35‑1 (MQ=255) cATGACCTTGCTAAAAAAAGGGGCGGCGGCAGATa < 1:7111960/35‑1 (MQ=255) aTGACCTTGCTAAAAAAAGGGGCGGCGGCAGATaa > 1:1208579/1‑35 (MQ=255) aTGACCTTGCTAAAAAAAGGGGCGGCGGCAGATaa > 1:19313986/1‑35 (MQ=255) aTGACCTTGCTAAAAAAAGGGGCGGCGGCAGATaa > 1:2747808/1‑35 (MQ=255) tGACCTTGCTAAAAAAAGGGGCGGCGGCAGATaaa < 1:19405580/35‑1 (MQ=255) tGACCTTGCTAAAAAAAGGGGCGGCGGCAGATaaa > 1:3067702/1‑35 (MQ=255) gACCTTGCTAAAAAAAGGGGCGGCGGCAGATaaaa > 1:6662868/1‑35 (MQ=255) gACCTTGCTAAAAAAAGGGGCGGCGGCAGATaaaa < 1:20505905/35‑1 (MQ=255) gACCTTGCTAAAAAAAGGGGCGGCGGCAGATaaaa < 1:10074429/35‑1 (MQ=255) gACCTTGCTAAAAAAAGGGGCGGCGGCAGATaaaa > 1:13880950/1‑35 (MQ=255) aCCTTGCTAAAAAAAGGGGCGGCGGCAGATaaaaa < 1:10944242/35‑1 (MQ=255) aCCGTGCTAAAAAAAGGGGCGGCGGCAGATaaaaa < 1:15158554/35‑1 (MQ=255) ccTTGCTAAAAAAAGGGGCGGCGGGAGATAAAAAc > 1:19793026/1‑35 (MQ=255) ccTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAAc > 1:9823790/1‑35 (MQ=255) ccTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAAc < 1:6123359/35‑1 (MQ=255) ccTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAAc < 1:13897968/35‑1 (MQ=255) ccTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAAc < 1:8749558/35‑1 (MQ=255) cTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAACa > 1:12252011/1‑35 (MQ=255) cTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAACa > 1:15912529/1‑35 (MQ=255) cTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAACa > 1:18267564/1‑35 (MQ=255) ttGCTAAAAAAAGGGGCGGCGGCAGATAAAAACAg < 1:7651719/35‑1 (MQ=255) ttGCTAAAAAAAGGGGCGGCGGCAGATAAAAACAg > 1:2362542/1‑35 (MQ=255) ttGCTAAAAAAAGGGGCGGCGGCAGATAAAAACAg > 1:11524906/1‑35 (MQ=255) tGCTAAAAAAAGGGGCGGCGGCAGATAAAAACAgc < 1:13424374/35‑1 (MQ=255) gctaAAAAAAGGGGCGGCGGCAGATAAAAACAgcg > 1:8891801‑M2/5‑35 (MQ=255) gctaAAAAAAGGGGCGGCGGCAGATAAAAACAgcg > 1:20230753‑M2/5‑35 (MQ=255) ctaAAAAAAGGGGCGGCGGCAGATAAAAACAgcgc < 1:16897670‑M2/32‑1 (MQ=255) ctaAAAAAAGGGGCGGCGGCAGATAAAAACAgcgc > 1:17417505‑M2/4‑35 (MQ=255) ctaAAAAAAGGGGCGGCGGCAGATAAAAACAgcgc > 1:8407172‑M2/4‑35 (MQ=255) aAAAAAAGGGGCGGCGGCAGATAAAAACAGCGccc > 1:1569094‑M2/2‑35 (MQ=255) aAAAAAAGGGGCGGCGGCAGATAAAAACAGCGccc < 1:15745319‑M2/34‑1 (MQ=255) aAAAAAAGGGGCGGCGGCAGATAAAAACAGCGccc > 1:4638167‑M2/2‑35 (MQ=255) aaaaaaGGGGCGGCGGCAGATAAAAACAGCGCCcg < 1:17919004/35‑1 (MQ=255) aaaaaaGGGGCGGCGGCAGATAAAAACAGCGCCcg > 1:3298725/1‑35 (MQ=255) | CAGCGACGATCTCGATCGTGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAACAGCGCCCG > REL606/1339505‑1339573 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |