Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 3,398,700 | 0 | G→T | 100.0% | 1.1 | 1 | L179M (CTG→ATG) | tuf | protein chain elongation factor EF‑Tu (duplicate of tufB) |
Rejected: E-value exceeds prediction threshold. | ||||||||||
Reads supporting (aligned to +/- strand): new base (0/1): ref base (0/0): total (0/1) |
GGATTTTCGCTTCCCACTCTGCGTCGC‑C‑TTCCAGCGCTTT > REL606/3398667‑3398706 | ggATTTTCGCTTCCCACTCTGCGTCGG‑T‑TCCCAgc > 1:15002491/1‑35 (MQ=1) nncTTNNCACTCTGCGTCGCACGTTCCATCGCttt < 1:13067686/33‑1 (MQ=9) | GGATTTTCGCTTCCCACTCTGCGTCGC‑C‑TTCCAGCGCTTT > REL606/3398667‑3398706 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |