New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1335926 | 52 (0.510) | 11 (0.170) | 5/30 | NT | 18.7% | coding (1724/2676 nt) | acnA | aconitate hydratase |
? | REL606 | = 2863313 | 63 (0.980) | coding (285/531 nt) | ygdP | dinucleoside polyphosphate hydrolase |
Only 100 of 193 total aligned reads displayed.
CGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCGTGTCCCAACGCA > REL606/2863279‑2863347 | cTCACCAGCTGCAAGAGAAACCATTTTTGTTTTtg > 1:4203539‑M2/1‑33 (MQ=255) cTCACCAGCTGCAAGAGAAACCATTTTTGTTTTtg < 1:13219610‑M2/35‑3 (MQ=255) tCACCAGCTGCAAGAGAAACCATTTTTGTTTTtgg < 1:10022406‑M2/35‑4 (MQ=255) tCACCAGCTGCAAGAGAAACCATTTTTGTTTTtgg > 1:5405484‑M2/1‑32 (MQ=255) cACCAGCTGCAAGAGAAACCATTTTTGTTTTtggc < 1:2638767‑M2/35‑5 (MQ=255) aCCAGCTGCAAGAGAAACCATTTTTGTTTTtggcc > 1:9954162‑M2/1‑30 (MQ=255) aCCAGCTGCAAGAGAAACCATTTTTGTTTTtggcc < 1:5685002‑M2/35‑6 (MQ=255) aCCAGCTGCAAGAGAAACCATTTTTGTTTTtggcc > 1:19834585‑M2/1‑30 (MQ=255) ccAGCTGCAAGAGAAACCATTTTTGTTTTtggccg < 1:15316995‑M2/35‑7 (MQ=255) ccAGCTGCAAGAGAAACCATTTTTGTTTTtggccg < 1:17788534‑M2/35‑7 (MQ=255) ccAGCTGCAAGAGAAACCATTTTTGTTTTtggccg < 1:14418622‑M2/35‑7 (MQ=255) ccAGCTGCAAGAGAAACCATTTTTGTTTTtggccg > 1:20333113‑M2/1‑29 (MQ=255) ccAGCTGCAAGAGAAACCATTTTTGTTTTtggccg < 1:428840‑M2/35‑7 (MQ=255) ccAGCTGCAAGAGAAACCATTTTTGTTTTtggccg > 1:5993279‑M2/1‑29 (MQ=255) aGCTGCAAGAGAAACCATTTTTGTTTTtggccgat < 1:17094407‑M2/35‑9 (MQ=255) aGCTGCAAGAGAAACCATTTTTGTTTTtggccgat > 1:307728‑M2/1‑27 (MQ=255) gCTGCAAGAGAAACCATTTTTGTTTTtggccgata < 1:2064640‑M2/35‑10 (MQ=255) tctcAAGAGAAACCATTTTTGTTTTTGGCCGATAc < 1:3629041/32‑1 (MQ=255) cTGCAAGAGAAACCATTTTTGTTTTTGGCCGATAc < 1:20515587/35‑1 (MQ=255) cTGCAAGAGAAACCATTTTTGTTTTTGGCCGATAc < 1:5930147/35‑1 (MQ=255) cTGCAAGAGAAACCATTTTTGTTTTTGGCCGATAc < 1:19902401/35‑1 (MQ=255) tGCAAGAGAAACCATTTTTGTTTTTGTCCGATACa > 1:15730035/1‑35 (MQ=255) tGCAAGAGAAACCATTTTTGTTTTTGGCCGATACa > 1:20253080/1‑35 (MQ=255) tGCAAGAGAAACCATTTTTGTTTTTGGCCGATACa < 1:12161232/35‑1 (MQ=255) tGCAAGAGAAACCATTTTTGTTTTTGGCCGATACa < 1:353421/35‑1 (MQ=255) tGCAACAGAAACCATTTTTGTTTTTGGCCGATACa > 1:18152712/1‑35 (MQ=255) gCAAGAGAACCCATTTTTGTTTTTGGCCGATACaa < 1:5065194/35‑1 (MQ=255) gCAAGAGAAACCATTTTTGTTTTTGGCCGATACaa > 1:20307347/1‑35 (MQ=255) cAAGAGAAACCATTTTTGTTTTTGGCCGATACaaa > 1:20015371/1‑35 (MQ=255) cAAGAGAAACCATTTTTGTTTTTGGCCGATACaaa > 1:10709312/1‑35 (MQ=255) cAAGAGAAACCATTTTTGTTTTTGGCCGATACaaa > 1:18798911/1‑35 (MQ=255) cAAGAGAAACCATTTTTGTTTTTGGCCGATACaaa < 1:2483971/35‑1 (MQ=255) cAAGAGAAACCATTTTTGTTTTTGGCCGATACaaa < 1:11428056/35‑1 (MQ=255) cAAGAGAAACCATTTTTGTTTTTGGCCGATACaaa < 1:12631543/35‑1 (MQ=255) cAAGAGAAACCATTTTTGTTTTTGGCCGATACaaa > 1:11265681/1‑35 (MQ=255) aaGAGAAACCATTTTTGTTTTTGGCCGATACAAAc > 1:93890/1‑35 (MQ=255) aaGAGAAACCATTTTTGTTTTTGGCCGATACAAAc > 1:8896469/1‑35 (MQ=255) aaGAGAAACCATTTTTGTTTTTGGCCGATACAAAc > 1:8249055/1‑35 (MQ=255) aaGAGAAACCATTTTTGTTTTTGGCCGATACAAAc < 1:12271807/35‑1 (MQ=255) aaGAGAAACCATTTTTGTTTTTGGCCGATACAAAc > 1:13903542/1‑35 (MQ=255) agagAAACCATTTTTGTTTTTTGCCGATACAAAcc > 1:5807693/1‑35 (MQ=255) agagAAACCATTTTTGTTTTTTGCCGATACAAAcc > 1:1293574/1‑35 (MQ=255) agagAAACCATTTTTGTTTTTGGCCGATACAAAcc < 1:15484931/35‑1 (MQ=255) agagAAACCATTTTTGTTTTTGGCCGATACAAAcc > 1:15563902/1‑35 (MQ=255) agagAAACCATTTTTGTTTTTGGCCGATACAAAcc < 1:2290772/35‑1 (MQ=255) aaagaAACCATTTTTGTTTTTGGCCGATACAAAcc < 1:19044216/33‑1 (MQ=255) gagaAACCATTTTTGTTTTTGGCCGATACAAACCg > 1:10157005/1‑35 (MQ=255) gagaAACCATTTTTGTTTTTGGCCGATACAAACCg > 1:16237938/1‑35 (MQ=255) agaAACCATTTTTGTTTTTGGCCGATACAAACCgg > 1:16282601/1‑35 (MQ=255) agaAACCATTTTTGTTTTTGGCCGATACAAACCgg > 1:3757351/1‑35 (MQ=255) agaAACCATTTTTGTTTTTGGCCGATACAAACCgg > 1:7476683/1‑35 (MQ=255) gaAACCATTTTTGTTTTTGGCCGATACAAACCGGc < 1:14969252/35‑1 (MQ=255) gaAACCATTTTTGTTTTTGGCCGATACAAACCGGc < 1:15874134/35‑1 (MQ=255) gaAACCATTTTTGTTTTTGGCCGATACAAACCGGc > 1:19192335/1‑35 (MQ=255) aaaCCATTTTTGTTTTTGGCCGATACAAACCGGCt < 1:9757293/35‑1 (MQ=255) aaaCCATTTTTGTTTTTGGCCGATACAAACCGGCt > 1:1490595/1‑35 (MQ=255) aaaCCATTTTTGTTTTTGGCCGATACAAACCGGCt > 1:1511236/1‑35 (MQ=255) aaaCCATTTTTGTTTTTGGCCGATACAAACCGGCt < 1:7963408/35‑1 (MQ=255) aaaCCATTTTTGTTTTTGGCCGATACAAACCGGCt > 1:2567587/1‑35 (MQ=255) aaCCATTTTTGTTTTTGGCCGATACAAACCGGCtt > 1:7993226/1‑35 (MQ=255) aCCATTTTTGTTTTTGGCCGATACAAACCGGCTTc < 1:5818073/35‑1 (MQ=255) aCCATTTTTGTTTTTGGCCGATACAAACCGGCTTc < 1:6901358/35‑1 (MQ=255) aCCATTTTTGTTTTTGGCCGATACAAACCGGCTTc < 1:17290724/35‑1 (MQ=255) aCCATTTTTGTTTTTGGCCGATACAAACCGGCTTc < 1:1421591/35‑1 (MQ=255) ccATTTTTGTTTATGGCCGATACAAACCGGCTTCg > 1:6958575/1‑35 (MQ=255) cATTTTTGTTTTTGGCCGATACAAACCGNNTTCnn > 1:17529284/1‑35 (MQ=255) cATTTTTGTTTTTGGCCGATACAAACCGGCTTCgt < 1:15398520/35‑1 (MQ=255) aTTTTTGTTTTTGGCCGATACAAACCGGCTTCgtg < 1:7068644/35‑1 (MQ=255) aTTTTTGTTTTTGGCCGATACAAACCGGCTTCgtg < 1:11488296/35‑1 (MQ=255) tttttttttttggccgataggctcagaagccaggt > 1:8112101‑M2/1‑10 (MQ=255) tttttgtttttgGCCGATACAAACCGGCTTCgtgt > 1:16922084/1‑35 (MQ=255) ttttttttttggccgataggctcagaagccaggtt > 1:9012896‑M2/1‑9 (MQ=255) ttttttttttggccgataggctcagaagccaggtt > 1:15289517‑M2/1‑9 (MQ=255) tttttttttggccgataggctcagaagccaggttg > 1:13455040‑M2/1‑8 (MQ=255) tttttttttggccgataggctcagaagccaggttg > 1:2809660‑M2/1‑8 (MQ=255) tttgtttttgGCCGATACAAACCGGCTTCGTGTcc > 1:7372078/1‑35 (MQ=255) tttgtttttgGCCGATACAAACCGGCTTCGTGTcc > 1:6318405/1‑35 (MQ=255) ttttttttggccgataggctcagaagccaggttga > 1:4909589‑M2/1‑7 (MQ=255) ttgtttttgGCCGATACAAACCGGCTTCGTGTccc > 1:13626491/1‑35 (MQ=255) ttgtttttgGCCGATACAAACCGGCTTCGTGTccc > 1:12304803/1‑35 (MQ=255) tgtttttgGCCGATACAAACCGGCTTNGTGTCCCa < 1:13415123/35‑1 (MQ=255) tgtttttgGCCGATACAAACCGGCTTCGTGTCCCa < 1:18459909/35‑1 (MQ=255) tgtttttgGCCGATACAAACCGGCTTCGTGTCCCa > 1:10923120/1‑35 (MQ=255) tgtttttgGCCGATACAAACCGGCTTCGTGTCCCa < 1:10855629/35‑1 (MQ=255) tgtttttgGCCGATACAAACCGGCTTCGTGTCCCa < 1:16491293/35‑1 (MQ=255) cttttttggccgataggctcagaagccaggttgat > 1:1832644‑M2/3‑6 (MQ=255) gtttttgGCCGATACAAACCGGCTTCGTGTCCCaa > 1:14032555/1‑35 (MQ=255) gtttttgGCCGATACAAACCGGCTTCGTGTCCCaa < 1:1615096/35‑1 (MQ=255) tttttggccgataggctcagaagccaggttgatat > 1:8505782‑M2/1‑4 (MQ=255) tttttgGCCGATACAAACCGGCTTCGTGTCCCAAc < 1:4608929/35‑1 (MQ=255) tttttgGCCGATACAAACCGGCTTCGTGTCCCAAc < 1:15335647/35‑1 (MQ=255) ttttcgGCCGATACAAACCGGCTTCGTGTCCCAAc > 1:19232437/1‑35 (MQ=255) ttttgGCCGATACAAACCGGCTTCGTGTCCCAACg > 1:12494081/1‑35 (MQ=255) tttggccgataggctcagaagccaggttgatattc > 1:18948172‑M2/1‑2 (MQ=255) tttggccgagaggctcagaagccaggttgatattc > 1:1198564‑M2/1‑2 (MQ=255) tttgGCCGATACAAACCGGCTTCGTGTCCCAACGc > 1:4478517/1‑35 (MQ=255) tttgGCCGATACAAACCGGCTTCGTGTCCCAACGc < 1:10376962/35‑1 (MQ=255) tttgGCCGATACAAACCGGCTTCGTGTCCCAACGc < 1:2231795/35‑1 (MQ=255) ttgGCCGATACAAACCGGCTTCGTGTCCCAACGCa < 1:7840754/35‑1 (MQ=255) ttgGCCGATACAAACCGGCTTCGTGTCCCAACGCa < 1:11196361/35‑1 (MQ=255) | CGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCGTGTCCCAACGCA > REL606/2863279‑2863347 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |