New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 326204 = | 101 (0.980) | 10 (0.130) | 4/36 | NT | 14.1% | coding (849/1887 nt) | prpE | predicted propionyl‑CoA synthetase with ATPase domain |
? | REL606 | = 4116137 | 46 (0.600) | intergenic (+15/‑78) | katG/yijE | catalase/hydroperoxidase HPI(I)/predicted permease |
CGGCGCGTAGACGATATACGAATGCCCCACCACCCAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/326243‑326204 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgCTGAACGGGGTCAGATTACAGCAGGTCGAAACGG < REL606/4116137‑4116104 CGGCGCGTAGACGATATACGAATGCCCCACCACCC < 1:172398/35‑1 CGGCGCGTAGACGATATACGAATGCCCCACCACCC > 1:12857163/1‑35 CGGCGCGTAGACGATATACGAATGCCCCACCACCC < 1:6963596/35‑1 CGGCGCGTAGACGATATACGAATGCCCCACCACCC > 1:8042215/1‑35 GGCGCGTAGACGATATACGAATGCCCCACCACCCA > 1:12122391/1‑35 GGCGCGTAGACGATATACGAATGCCCAACCACCCA < 1:4962766/35‑1 GCGCGTAGACGATATACGAATGCCCCACCACCCAG > 1:19750103/1‑35 GCGCGTAGACGATATACGAATGCCCCACCACCCAG > 1:17627994/1‑35 CGCGTAGACGATATACGAATGCCCCACCACCCCGC > 1:3357747/1‑35 CGCGTAGACGATATACGAATGCCCCACCACCCAGC > 1:15857100/1‑35 CGCGTAGACGATATACGAATGCCCCACCACACAGC < 1:1510566/35‑1 GCGTAGACGATATACGAATGCCCCACCACCCAGCC < 1:17070290/35‑1 CGTAGACGATATACGAATGCCCCACCACCCAGCCG > 1:16733429/1‑35 CGTAGACGATATACGAATGCCCCACCACCCAGCCG > 1:14743500/1‑35 CGTAGACGATATACGAATGCCCCACCACCCAGCCG > 1:5243996/1‑35 cccCCCCACCACCCAGCCGCTGAACGGGGTCAGAT < 1:19657853/32‑1 ccgCCCACCACCCAGCCGCTGAACGGGGTCAGATT < 1:15150431/32‑1 ctCCCACCACCCAGCCGCTGAACGGGGTCAGATTA < 1:11989631/33‑1 ccgCCACCACCCAGCCGCTGAACGGGGTCAGATTA < 1:13330638/32‑1 gCCCAGCACCCAGCCGCTGAACGGGGTCAGATTAC < 1:14783956/34‑1 aCCACCACCCAGCCGCTGAACGGGGTCAGATTACA < 1:16142710/34‑1 CCCACCACCCAGCCGCTGAACGGGGTCAGATTACA < 1:2747014/35‑1 ccgCCACCCAGCCGCTGAACGGGGTCAGATTACAG < 1:10739194/32‑1 CCACCACCCAGCCGCTGAACGGGGTCAGATTACAG < 1:6375029/35‑1 cgCCACCCAGCCGCTGAACGGGGTCAGATTACAGC < 1:11827749/33‑1 CACCCCCCAGCCGCTGAACGGGGTCAGATTACAGC < 1:13349467/35‑1 agCACCCAGCCGCTGAACGGGGTCAGATTACAGCA < 1:14322753/33‑1 ACCACCCAGCCGCTGAACGGGGTCAGATTACAGCA < 1:5690320/35‑1 CCACCCAGCCGCTGAACGGGGTCAGATTACAGCAG < 1:16241669/35‑1 CCACCCAGCCGCTGAACGGGGTCAGATTACAGCAG < 1:10113398/35‑1 CCACCCAGCCGCTGAACGGGGTCAGATTACAGCAG < 1:19247344/35‑1 CCACCCAGCCGCTGAACGGGGTCAGATTACAGCAG < 1:7390247/35‑1 cgCCCAGCCGCTGAACGGGGTCAGATTACAGCAGG < 1:16580461/33‑1 CACCCGGCCGCTGAACGGGGTCAGATTACAGCAGG < 1:959558/35‑1 CACCCAGCCGCTGAACGGGGTCAGGTTACAGCAGG < 1:13912201/35‑1 CACCCAGCCGCTGAACGGGGTCAGATTACAGCAGG < 1:8290480/35‑1 CACCCAGCCGCTGAACGGGGTCAGATTACAGCAGG < 1:12151299/35‑1 ACCCAGCCGCTGAACGGGGTCAGATTACAGAAGGT < 1:6894330/35‑1 CCCAGCCGCTGAACGGGGTCAGATTACAGCAGGTC < 1:4978393/35‑1 CCCAGCCGCTGAACGGGGTCAGATTACAGCAGGTC < 1:7143198/35‑1 CCCAGCCGCTGAACGGGGTCAGATTACAGCAGGTC < 1:9950333/35‑1 CCCACCCGCTGAACGGGGTCAGATTACAGCAGGTC < 1:8882106/35‑1 CCAGCCGCTGAACGGGGTCAGATTACAGCAGGTCG < 1:13824661/35‑1 CAGCCGCTGAACGGGGTCAGATTACAGCAGGTCGA > 1:8650427/1‑35 CAGCCGCTGAACGGGGTCAGATTACAGCAGGTCGA > 1:12876655/1‑35 CAGCCGCTGAACGGGGTCAGATTACAGCAGGTCGA > 1:3308616/1‑35 AGCCGCTGAACGGGGTCAGATTACAGCAGGTCGAA > 1:12756924/1‑35 GCCGCTGAACGGGGTCAGATTACAGCAGGTCGAAA < 1:19637470/35‑1 GCCGCTGAACGGGGTCAGATTACAGCAGGTCGAAA > 1:6182935/1‑35 GCCGCTGAACGGGGTCAGATTACAGCAGGTCGAAA < 1:13007314/35‑1 GCCGCTGAACGGGGTCAGATTACAGCAGGTCGAAA > 1:13663855/1‑35 CCGCTGAGCGGGGTCAGATTACAGCAGGTCGAAAC < 1:4960235/35‑1 CCGCTGAACGGGGTCAGATTACAGCATGTCGAAAC > 1:9887167/1‑35 CCGCTGAACGGGGTCAGATTACAGCAGTTCGAAAC > 1:4224071/1‑35 CCGCTGAACGGGGTCAGATTACAGCAGGTCGAAAC < 1:10103973/35‑1 CCGCTGAACGGGGTCAGATTACAGCAGGTCGAAAC < 1:11041670/35‑1 CCGCTGAACGGGGTCAGATTACAGCAGGTCGAAAC < 1:13272372/35‑1 CCGCTGAACGGGGTCAGATTACAGCAGGTCGAAAC > 1:17472734/1‑35 CCGCTGAACGGGGTCAGATTACAGCAGGTCGAAAC > 1:19298448/1‑35 CCGCTGAACGGGGTCAGATTACAGCAGGTCGAAAC > 1:13955956/1‑35 CCGCTGAACGGGGTCAGATTACAGCAGGTCGAAAC > 1:1673714/1‑35 CGCTGAACGGGGTCAGATTACAGCAGGTCGAAACG < 1:18178337/35‑1 CGCTGAACGGGGTCAGATTACAGCAGGTCGAAACG > 1:10796522/1‑35 CGCTGAACGGGGTCAGATTACAGCAGGTCGAAACG < 1:19690516/35‑1 CGCTGAACGGGGTCAGATTACAGCAGGTCGAAACG > 1:1232172/1‑35 CGCTGAACGGGGTCAGATTACAGCAGGTCGAAACG > 1:2298412/1‑35 CGCTGAACGGGGTCAGATTACAGCAGGTCGAAACG > 1:6229989/1‑35 CGCTGAACGGGGTCAGATTACAGCAGGTCGAAACG < 1:5653617/35‑1 CGCGGAACGGGGTCAGATTACAGCAGGTCGAAACG < 1:2461309/35‑1 GCTGAACGGGGTCAGATTACAGCAGGTCGAAACGG > 1:12702239/1‑35 GCTGAACGGGGTCAGATTACAGCAGGTCGAAACGG < 1:10399496/35‑1 GCTGAACGGGGTCAGATTACAGCAGGTCGAAACGG > 1:17309337/1‑35 GCTGAACGGGGTCAGATTACAGCAGGTCGAAACGG > 1:10384505/1‑35 GCTGAACGGGGTCAGATTACAGCAGGTCGAAACGG > 1:13861614/1‑35 GCTGAACGGGGTCAGATTACAGCAGGTCGAAACGG > 1:4173189/1‑35 CGGCGCGTAGACGATATACGAATGCCCCACCACCCAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/326243‑326204 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgCTGAACGGGGTCAGATTACAGCAGGTCGAAACGG < REL606/4116137‑4116104 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |