New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 932696 = | 61 (0.590) | 12 (0.180) | 3/32 | NT | 18.9% | coding (59/696 nt) | aqpZ | aquaporin Z |
? | REL606 | = 3040633 | 62 (0.910) | coding (654/810 nt) | pppA | bifunctional prepilin leader peptidase/ methylase |
Only 100 of 120 total aligned reads displayed.
TTCCGGGAAGCCTGCGGCCAGTACAGCACTACCACAGCCACCAAAAACAAGCCAGAAAGTACCAAAACA > REL606/932662‑932730 | ttCCGGGAAGCCTGCGGCCAGTACAGCACTACcac > 1:16439124/1‑35 (MQ=255) ttCCGGGAAGCCTGCGGCCAGTACAGCACTACcac > 1:5324333/1‑35 (MQ=255) ccGGGAAGCCTGCGGCCAGTACAGCACTACCACAg > 1:3324093/1‑35 (MQ=255) ccGGGAAGCCTGCGGCCAGTACAGCACTACCACAg > 1:4954218/1‑35 (MQ=255) ccGGGAAGCCTGAGGCCAGTACAGCCCTACCACAg < 1:10701347/35‑1 (MQ=38) cGGGAAGCCTGCGGCCAGTACAGCACTACCACAGc > 1:13392902/1‑35 (MQ=255) gggAAGCCTGCGGCCAGTACAGCACTACCACAGcc > 1:6895898/1‑35 (MQ=255) ggAAGCCTGCGGCCAGTACAGCACTACCCCACccc > 1:7318546/1‑34 (MQ=25) ggAAGCCTGCGGCCAGTACAGCACTACCACAGcca > 1:4234455/1‑35 (MQ=255) gAAGCCTGCGGCCAGTACAGCACTACCACAGccac > 1:11467072/1‑35 (MQ=255) aacgttgggcagtgataacgcccccaccCAGccac < 1:8158929‑M1/7‑1 (MQ=255) aacgttgggcagtgataacgcccccaccCAGccac < 1:7591460‑M1/7‑1 (MQ=255) acgttgggcagtgataacgcccccaccTAGccacc < 1:13006885‑M1/8‑1 (MQ=255) acgttgggcagtgataacgcccccaccCAGccacc < 1:17123334‑M1/8‑1 (MQ=255) aaGCCTGCGGCCAGTACAGCACTACCACAGccacc > 1:15820852/1‑35 (MQ=255) aaGCCTGCGGCCAGTACAGCACTACCACAGccacc > 1:7215645/1‑35 (MQ=255) aaGCCTGCGGCCAGTACAGCACTACCACAGccacc > 1:7422194/1‑35 (MQ=255) aGCCTGCGTCCAGTACAGCACTACCACAGccacca > 1:10322136/1‑35 (MQ=255) aGCCTGCGGCCAGTACAGCACTACCACAGccacca > 1:11382258/1‑35 (MQ=255) gcatGCGGCCAGTACAGCACTACCACAGCCACCaa > 1:3228492/4‑35 (MQ=255) gCCTGCGGCCAGTACAGCACTACCACAGCCACCaa > 1:12703533/1‑35 (MQ=255) gCCTGCGGCCAGTACAGCACTACCACAGCCACCaa > 1:19415568/1‑35 (MQ=255) ccTGCGGCCAGTACAGCACTACCACAGCCACCaaa > 1:6785158/1‑35 (MQ=255) ccTGCGGCCAGTACAGCACTACCACAGCCACCaaa > 1:8902495/1‑35 (MQ=255) cTGCGGCCAGTACAGCACTACCACAGCCACCaaaa > 1:13025087/1‑35 (MQ=255) cTGCGGCCAGTACAGCACTACCACAGCCACCaaaa > 1:1101810/1‑35 (MQ=255) cTGCGGCCAGTACAGCACTACCACAGCCACCaaaa > 1:11408547/1‑35 (MQ=255) gCGGCCAGTACAGCACTACCACAGCCACCAAAAAc > 1:11059028/1‑35 (MQ=255) ggCCAGTACATCACTACCACAGCCACCAAAAACaa > 1:18054194/1‑35 (MQ=255) ggCCAGTACAGCACTACCACAGCCACCAAAAACaa > 1:3315930/1‑35 (MQ=255) ggCCAGTACAGCACTACCACAGCCACCAAAAACaa > 1:20393143/1‑35 (MQ=255) ggCCAGTACAGCACTACCACAGCCACCAAAAACaa > 1:12173356/1‑35 (MQ=255) ggCCAGTACAGCACTACCACAGCCACCAAAAACaa > 1:11987377/1‑35 (MQ=255) ggCCAGTACAGCACTACCACAGCCACCAAAAACaa > 1:20540106/1‑35 (MQ=255) ggCCAGTACAGCACTACCACAGCCACCAAAAACaa > 1:14881850/1‑35 (MQ=255) ccAGTACAGCACTACTACAGCCACCAAAAACaatc > 1:12986610/1‑33 (MQ=38) ccAGTACAGCACTACCACAGCCACCAAAAACAAGc > 1:15044275/1‑35 (MQ=255) cAGTACAGCACTACCACAGCCACCAAAAACAAGcc > 1:1453842/1‑35 (MQ=255) cAGTACAGCACTACCACAGCCACCAAAAACAAGcc > 1:20531790/1‑35 (MQ=255) cAGTACAGCACTACCACAGCCACCAAAAACAAGcc > 1:19556859/1‑35 (MQ=255) aGTACAGCACTACCACAGCCACCAAAAACAAGCCa > 1:7201645/1‑35 (MQ=255) aGTACAGCACTACCACAGCCACCAAAAACAAGCCa > 1:6032411/1‑35 (MQ=255) aGTACAGCACTACCACAGCCACCAAAAACAAGCCa > 1:13082506/1‑35 (MQ=255) aGTACAGCACTACCACAGCCACCAAAAACAAGCCa > 1:15517179/1‑35 (MQ=255) aGTACAGCACTACCACAGCCACCAAAAACAAGCCa > 1:5773064/1‑35 (MQ=255) gTACAGCACTACCACAGCCACCAAAAACAAGCCAg > 1:1627676/1‑35 (MQ=255) tACAGCACTACCACAGCCACCAAAAACAAGCCAGa > 1:18844584/1‑35 (MQ=255) aCAGCACTACCACAGCCACCAAAAACAAGCCAGaa > 1:874647/1‑35 (MQ=255) aCAGCACTACCACAGCCACCAAAAACAAGCCAGaa > 1:35741/1‑35 (MQ=255) aCAGCACTACCACAGCCACCAAAAACAAGCCAGaa > 1:18743711/1‑35 (MQ=255) aCAGCACTACCACAGCCACCAAAAACAAGCCAGaa > 1:15432874/1‑35 (MQ=255) aCAGCACTACCACAGCCACCAAAAACAAGCCAGaa > 1:1779561/1‑35 (MQ=255) aCAGCACTACCACAGCCACCAAAAACAAGCCAGaa > 1:1731906/1‑35 (MQ=255) aCAGCACTACCACAGCCACCAAAAACAAGCCAGaa > 1:16541666/1‑35 (MQ=255) aCAGCACTACCACAGCCACCAAAAACAAGCCAGaa > 1:16207490/1‑35 (MQ=255) cAGCACTACCACAGCCACCAAAAACAAGCCAGaaa > 1:18010912/1‑35 (MQ=255) cAGCACTACCACAGCCACCAAAAACAAGCCAGaaa > 1:4907995/1‑35 (MQ=255) aGCACTACCACAGCCACCAAAAACAAGCCAGAAAg > 1:15542951/1‑35 (MQ=255) gCACTACCACAGCCACCAAAAACAGGCCAGAAAGt > 1:6288154/1‑35 (MQ=255) gCACTACCACAGCCACCAAAAACAAGCCAGAAAGt > 1:18732326/1‑35 (MQ=255) cccccccccCAGCCACCAAAAACAAGCCAGAAAGt > 1:17952655‑M1/10‑35 (MQ=255) cccccccccCAGCCACCAAAAACAAGCCAGAAAGt > 1:7412818‑M1/10‑35 (MQ=255) ccccccccCAGCCACCAAAAACAAGCCAGAAAGTa > 1:5924314‑M1/9‑35 (MQ=255) cACTACCACAGCCACCAAAAACAAGCCAGAAAgat > 1:3637284/1‑33 (MQ=255) cACTACCACAGCCACCAAAAACAAGCCAGAAAgat > 1:10412848/1‑33 (MQ=255) cACTACCACAGCCACCAAAAACAAGCCAGAAAGTa > 1:3484161/1‑35 (MQ=255) cACTACCACAGCCACCAAAAACAAGCCAGAAAGTa > 1:8056715/1‑35 (MQ=255) cACTACCACAGCCACCAAAAACAAGCCAGAAAGTa > 1:11976248/1‑35 (MQ=255) cccccccCAGCCACCAAAAACAAGCCAGAAAGTAc > 1:20175815‑M1/8‑35 (MQ=255) cccccccCAGCCACCAAAAACAAGCCAGAAAGTAc > 1:15965649‑M1/8‑35 (MQ=255) cccccccCAGCCACCAAAAACAAGCCAGAAAGTAc > 1:4724000‑M1/8‑35 (MQ=255) ccccccCAGCCACCAAAAACAAGCCAGAAAGTAcc > 1:13849754‑M1/7‑35 (MQ=255) ccccccCAGCCACCAAAAACAAGCCAGAAAGTAcc > 1:20118680‑M1/7‑35 (MQ=255) ccccccCAGCCACCAAAAACAAGCCAGAAAGTAcc > 1:12108399‑M1/7‑35 (MQ=255) ccccccCAGCCACCAAAAACAAGCCAGAAAGTAcc > 1:17321129‑M1/7‑35 (MQ=255) cTACCACAGCCACCAAAAACAAGCCAGAAAGTAcc > 1:6072360/1‑35 (MQ=255) tACCACAGCCACCAAAAACAAGCCAGAAAGTACCa > 1:10692242/1‑35 (MQ=255) tACCACAGCCACCAAAAACAAGCCAGAAAGTACCa > 1:1990858/1‑35 (MQ=255) cccccCAGCCACCAAAAACAAGCCAGAAAGTACCa > 1:10831051‑M1/6‑35 (MQ=255) ccccCAGCCACCAAAAACAAGCCAGAAAGTACCaa > 1:7737844‑M1/5‑35 (MQ=255) ccccCAGCCACCAAAAACAAGCCAGAAAGTACCaa > 1:2580358‑M1/5‑35 (MQ=255) ccccCAGCCACCAAAAACAAGCCAGAAAGTACCaa > 1:18576239‑M1/5‑35 (MQ=255) aCCACAGCCACCAAAAACAAGCCAGAAAGTACCaa > 1:8625409/1‑35 (MQ=255) aCCACAGCCACCAAAAACAAGCCAGAAAGTACCaa > 1:190239/1‑35 (MQ=255) aCCACAGCCACCAAAAACAAGCCAGAAAGTACCaa > 1:18915969/1‑35 (MQ=255) aCCACAGCCACCAAAAACAAGCCAGAAAGTACCaa > 1:50358/1‑35 (MQ=255) aCCACAGCCACCAAAAACAAGCCAGAAAGTACCaa > 1:18443811/1‑35 (MQ=255) cccCAGCCGCCAAAAACAAGCCAGAAAGTACCaaa > 1:13219171‑M1/4‑35 (MQ=255) cccCAGCCACCAAAAACAAGCCAGAAAGTACCaaa > 1:13503916‑M1/4‑35 (MQ=255) ccACAGCCACCAAAAACAAGCCAGAAAGTACCaaa > 1:1786690/1‑35 (MQ=255) ccACAGCCACCAAAAACAAGCCAGAAAGTACCaaa > 1:4224415/1‑35 (MQ=255) ccACAGCCACCAAAAACAAGCCAGAAAGTACCaaa > 1:1425125/1‑35 (MQ=255) ccCAGCCACCAAAAACAAGCCAGAAAGTACCaaaa > 1:15622337‑M1/3‑35 (MQ=255) cacaGCCACCAAAAACAAGCCAGAAAGTACCaaaa > 1:5923845/1‑35 (MQ=255) cCAGCCACCAAAAACAAGCCAGAAAGTACCAAAAc > 1:13569776‑M1/2‑35 (MQ=255) cCACCCACCAAAAACAAGCCAGAAAGTACCAAAAc > 1:15182456‑M1/2‑35 (MQ=255) acaGCCACCAAAAACAAGCCAGAAAGTACCAAAAc > 1:3819987/1‑35 (MQ=255) CAGCCACCAAAAACAAGCCAGAAAGTACCAAAACa < 1:1197132‑M1/35‑1 (MQ=255) CAGCCACCAAAAACAAGCCAGAAAGTACCAAAACa > 1:20492704‑M1/1‑35 (MQ=255) CACCCACCAAAAACAAGCCAGAAAGTACCAAAACa > 1:3618165‑M1/1‑35 (MQ=255) | TTCCGGGAAGCCTGCGGCCAGTACAGCACTACCACAGCCACCAAAAACAAGCCAGAAAGTACCAAAACA > REL606/932662‑932730 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |