New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 965820 = | 63 (0.610) | 8 (0.100) | 3/36 | NT | 12.3% | coding (842/909 nt) | ycaN | predicted DNA‑binding transcriptional regulator |
? | REL606 | 4368357 = | 67 (0.870) | coding (159/969 nt) | psd | phosphatidylserine decarboxylase |
AGATCTATTATCCAAACCGCCAGTATATGTCCTGCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/965859‑965820 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcttTTGCGCCTCTTTCATGTCGACCTTGTAGTATTTA > REL606/4368357‑4368390 AGATCTATTATCCAAACCGCCAGTATATGTCCTGC > 1:20251880/1‑35 AGATCTATTATCCAAACCGCCAGTATATGTCCTGC > 1:12035259/1‑35 AGATCTATTATCCAAACCGCCAGTATATGTCCTGC > 1:6884102/1‑35 AGATCTATTATCCAAACCGCCAGTATATGTCCTGC > 1:5560888/1‑35 GATCTATTATCCAAACCGCCAGTATATGTCCTGCG > 1:16937850/1‑35 GATCTATTATCCAAACCGCCAGTATATGTCCTGCG > 1:4445385/1‑35 ATCTATTATCCAAACCGCCAGTATATGTCCTGCGG > 1:11123138/1‑35 ATCTATTATCCAAACCGCCAGTATATGTCCTGCGG > 1:18954004/1‑35 TCTATTATCCAAACCGCCAGTATATGTCCTGCGGC > 1:20050638/1‑35 TCTATTATCCAAACCGCCAGTATATGTCCTGCGGC > 1:2863596/1‑35 TCTATTATCCAAACCGCCAGTATATGTCCTGCGGC > 1:15426167/1‑35 CTATTATCCAAACCGCCAGTATATGTCCTGCTGCT > 1:10641347/1‑35 CTATTATCCAAACCGCCAGTATATGTCCTGCGGCT > 1:14875661/1‑35 CTATTATCCAAACCGCCAGTATATGTCCTGCGGCT > 1:6883408/1‑35 cATTATCCAAACCGCCAGTATATGTCCTGCGGCTT > 1:3923526/2‑35 TATTATCCAAACCGCCAGTATATGTCCTGCGGCTT > 1:18956569/1‑35 ATTATCCAAACCGCCAGTATATGTCCTGCGGCTTT > 1:18079915/1‑35 TTATCCAAACCGCCAGTATATGTCCTGCGGCTTTc > 1:18722112/1‑34 TTATCCAAACCGCCAGTATATGTCCTGCGGCTTTc > 1:8414567/1‑34 TTATCCAAACCGCCAGTATATGTCCTGCGGCTTTc > 1:11095950/1‑34 TTATCCAAACCGCCAGTATATGTCCTGCGGCTTTT > 1:2465835/1‑35 TATCCAAACCGCCAGTATATGTCCTGCGGCTTTct > 1:5180403/1‑33 ATCCAAACCGCCAGTATATGTCCTGCGGCTTTTGC > 1:19381389/1‑35 TCCAAACCGCCAGTATATGTCCTGCGGCTTTTtgg > 1:10304671/1‑32 CCAAACCGCCAGTATATGTCCTGCGGCTTTTGCGC > 1:9518936/1‑35 CCAAACCGCCAGTATATGTCCTGCGGCTTTCGCGC > 1:20255089/1‑35 CCAAACCGCCAGTATATGTCCTGCGGCTTTCGCGC > 1:20457489/1‑35 nAACCGCCAGTATATGTCCTGCGGCTTTCGCGCCT > 1:13800169/2‑35 AAACCGCCAGTATATGTCCTGCGGCTTTTGCGCac > 1:20581101/1‑33 AAACCGCCAGTATATGTCCTGCGGCTTTTGCGCCT > 1:6796313/1‑35 AACCGCCAGTATATGTCCTGCGGCTTTTGCGCCTt > 1:12420255/1‑34 CGCCAGTATATGTCCTGCGGCTTTTGCGCCTTTTT > 1:17356075/1‑35 CGGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGT < 1:20261962/35‑1 CGGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGT < 1:9618895/35‑1 GGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTA > 1:6267962/1‑35 GGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTA < 1:562870/35‑1 GGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTA < 1:11862604/35‑1 GGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTA > 1:8949337/1‑35 GGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTA > 1:11107968/1‑35 GGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTA < 1:9929005/35‑1 GGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTA > 1:17621226/1‑35 GGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTA < 1:17307882/35‑1 GGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTA > 1:3069053/1‑35 GCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTAT > 1:3818381/1‑35 GCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTAT > 1:4150885/1‑35 GCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTAT < 1:9529974/35‑1 GCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTAT < 1:6140366/35‑1 GCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTAT > 1:165911/1‑35 GCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTAT > 1:20048415/1‑35 GCTTCTGCGCCTCTTTCATGTCGACCTTGTAGTAT > 1:7668851/1‑35 CTTTTGCGCCTCTTTCATGTCGACCTTGTAGTATT < 1:2395009/35‑1 CTTTTGCGCCTCTTTCATGTCGACCTTGTAGTATT > 1:4617083/1‑35 CTTTTGCGCCTCTTTCATGTCGACCTTGTAGTATT < 1:2256643/35‑1 TTTTGCGCCTCTTTCATGTCGACCTTGTAGTATTT < 1:7746128/35‑1 TTTTGCGCCTCTTTCATGTCGACCTTGTAGTATTT < 1:6951215/35‑1 TTTTGCGCCTCTTTCATGTCGACCTTGTAGTATTT < 1:6942596/35‑1 TTTTGCGCCTCTTTCATGTCGACCTTGTAGTATTT > 1:14292668/1‑35 TTTTGCGCCTCTTTCATGTCGACCTTGTAGTATTT > 1:16026027/1‑35 TTTTGCGCCTCTTTCATGTCGACCTTGTAGTATTT > 1:3674665/1‑35 TTTTGCGCCTCTTTCATGTCGACCTTGTAGTATTT > 1:16756620/1‑35 TTTTGCGCCTCTTTCATGTCGACCTTGTAGTATTT > 1:16971573/1‑35 TTTGCGCCTCTTTCATGTCGACCTTGTAGTATTTA < 1:13327033/35‑1 TTTGCGCCTCTTTCATGTCGACCTTGTAGTATTTA > 1:16211316/1‑35 TTTGCGCCTCTTTCATGTCGACCTTGTAGTATTTA < 1:3750782/35‑1 TTTGCGCCTCTTTCATGTCGACCTTGTAGTATTTA < 1:3189605/35‑1 TTTGCGCCTCTTTCATGTCGACCTTGTAGTATTTA > 1:19858420/1‑35 AGATCTATTATCCAAACCGCCAGTATATGTCCTGCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/965859‑965820 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcttTTGCGCCTCTTTCATGTCGACCTTGTAGTATTTA > REL606/4368357‑4368390 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |