New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1006225 | 100 (0.970) | 9 (0.110) | 3/38 | NT | 13.2% | intergenic (‑149/+20) | asnS/pncB | asparaginyl‑tRNA synthetase/nicotinate phosphoribosyltransferase |
? | REL606 | = 4210740 | 39 (0.480) | intergenic (‑178/+75) | yjbD/lysC | hypothetical protein/aspartate kinase III |
Only 100 of 200 total aligned reads displayed.
AAAGATTTCGGAATTAAAGGTAAAAAAAGGGAGCCGATTAGCTCCCTGATGATATTAACTGGCTTTTTT > REL606/1006191‑1006259 | aaaGATTTCGGAATTAAAGGTAAAAAAAGGGAGCC < 1:7177916‑M1/35‑1 (MQ=255) aaaGATTTCGGAATTAAAGGTAAAAAAAGGGAGCC > 1:14901738‑M1/1‑35 (MQ=255) aaGATTTCGGAATTAAAGGTAAAAAAAGGGAGCCg < 1:1408511/35‑1 (MQ=255) aGATTTCGGAATTAAAGGTAAAAAAAGGGAGCCGa < 1:2077871/35‑1 (MQ=255) gATTTCGGAATTAAAGGTAAAAAAAGGGAGCCGAt > 1:11162677/1‑35 (MQ=255) aTTTCGGAATTAAAGGTAAAAAAAGGGAGCCGAtt > 1:17833036/1‑35 (MQ=255) tttCGGAATTAAAGGTAAAAAAAGGGAGCCGATTa < 1:11684322/35‑1 (MQ=255) tttCGGAATTAAAGGTAAAAAAAGGGAGCCGATTa < 1:12367167/35‑1 (MQ=255) ttCGGAATTAAAGGTAAAAAAAGGGAGCCGATTAg < 1:9233442/35‑1 (MQ=255) tCGGAATTAAAGGTAAAAAAAGGGAGCCGATTAGc < 1:18298909/35‑1 (MQ=255) tCGGAATTAAAGGTAAAAAAAGGGAGCCGATTAGc < 1:13779553/35‑1 (MQ=255) tCGGAATTAAAGGTAAAAAAAGGGAGCCGATTAGc < 1:8250909/35‑1 (MQ=255) tCGGAATTAAAGGTAAAAAAAGGGAGCAGATTAGc < 1:15178445/35‑1 (MQ=255) cGGAATTAAAGGTAAAAAAAGGGAGCCGATTAGCt < 1:18373321/35‑1 (MQ=255) gAATTAAAGGTAAAAAAAGGGAGCCGATTAGCTcc > 1:10320118/1‑35 (MQ=255) gAATTAAAGGTAAAAAAAGGGAGCCGATTAGCTcc > 1:10799779/1‑35 (MQ=255) gAATTAAAGGTAAAAAAAGGGAGCCGATTAGATcc < 1:9034360/35‑1 (MQ=255) aaTTAAAGGTAAAAAAAGGGAGCCGATTAGCTccc < 1:741775/35‑1 (MQ=255) aaTTAAAGGTAAAAAAAGGGAGCCGATTAGCTccc < 1:5795030/35‑1 (MQ=255) aaTTAAAGGAAAAAAAAGGGAGCCGATTAGCTccc < 1:8453619/35‑1 (MQ=255) ttAAAGGTAAAAAAAGGGAGCCTATTAGCTCCCtg > 1:12206853/1‑35 (MQ=255) ttAAAGGTAAAAAAAGGGAGCCGATTAGCTCCCtg > 1:3560002/1‑35 (MQ=255) tAAAGGTAAAAAAAGGGAGCCGATTAGCTCCCtga > 1:2125384/1‑35 (MQ=255) tAAAGGTAAAAAAAGGGAGCCGATTAGCTCCCtga < 1:15359137/35‑1 (MQ=255) tAAAGGTAAAAAAAGGGAGCCGATTAGCTCCCtga < 1:4649183/35‑1 (MQ=255) naaGGNNAAAAAAGGGAGCCGATTAGCTCCCtgat < 1:13590028/34‑1 (MQ=255) aaaGGTAAAAAAAGGGAGCCGATTAGCTCCCtgat > 1:13979926/1‑35 (MQ=255) aaaGGTAAAAAAAGGGAGCCGATTAGCTCCCtgat < 1:3275352/35‑1 (MQ=255) aaaGGTAAAAAAAGGGAGCCGATTAGCTCCCtgat > 1:17150682/1‑35 (MQ=255) aaGGTAAAAAAAGGGAGCCGATTAGCTCCCtgatg < 1:5937655/35‑1 (MQ=255) aaGGTAAAAAAAGGGAGCCGATTAGCTCCCtgatg < 1:7206601/35‑1 (MQ=255) aaGGT‑AAAAAAGGGAGCCGATTAGCTCCCtgatga < 1:18611519/35‑1 (MQ=38) aGGTAAAAAAAGGGAGCCGATTAGCTCCCtgatga > 1:16675363/1‑35 (MQ=255) gTAAAAAAAGGGAGCCGATTAGCTCCCTGATGata > 1:5469888/1‑35 (MQ=255) gTAAAAAAAGGGAGCCGATTAGCTCCCTGATGata > 1:15255430/1‑35 (MQ=255) gTAAAAAAAGGGAGCCGATTAGCTCCCTGATGata > 1:2805920/1‑35 (MQ=255) gTAAAAAAAGGGAGCCGATTAGCTCCCTGATGata > 1:1824671/1‑35 (MQ=255) aaaaataagGGAGCCtgtactctgttaaccagcgt < 1:6616218‑M1/34‑21 (MQ=255) taaaaaagGGAGCCtgtactctgttaaccagcgtc < 1:3441115‑M1/34‑22 (MQ=255) aaaaaaaGGGAGCCtgtactctgttaaccagcgtc < 1:8682196‑M1/35‑22 (MQ=255) aaaaaaaGGGAGCCGATTAGCTCCCTGATGATAtt > 1:5567007/1‑35 (MQ=255) aaaaaaaGGGAGCCGATTAGCTCCCTGATGATAtt < 1:20220937/35‑1 (MQ=255) aaaaaaaCGGAGCCtgtactctgttaaccagcgtc < 1:20259961‑M1/35‑22 (MQ=255) aaaaaaGGGAGCCtgtactctgttaaccagcgtct < 1:1577614‑M1/35‑23 (MQ=255) aaaaaaGGGAGCCGATTAGCTCCCTGATGATATTa > 1:18052999/1‑35 (MQ=255) aaaaaaGGGAGCCGATTAGCTCCCTGATGATATTa < 1:693764/35‑1 (MQ=255) aaaaaaGGGAGCCGATTAGCTCCCTGATGATATTa > 1:12574982/1‑35 (MQ=255) aaaaaaGGGAGCCGATTAGCTCCCTGATGATATTa > 1:4967198/1‑35 (MQ=255) aaaaaGGGAGCCtgtactctgttaaccagcgtctt < 1:9575715‑M1/35‑24 (MQ=255) aaaaaGGGAGCCGATTAGCTGCCTGATGATATTaa < 1:11272989/35‑1 (MQ=255) aaaaaGGGAGCCGATTAGCTCCCTGATGATATTaa > 1:20509602/1‑35 (MQ=255) aaaaaGGGAGCCGATTAGCTACCTGATGATATTaa < 1:19655768/35‑1 (MQ=255) aaaGGGAGCCGATTAGCTCCCTGATGATATTAACt > 1:4776580/1‑35 (MQ=255) aaaGGGAGCCGATTAGCTCCCTGATGATATTAACt > 1:9628042/1‑35 (MQ=255) aaaGGGAGCCGATTAGCTCCCTGATGATATTAACt > 1:8143101/1‑35 (MQ=255) aaaCGGAGCCtgtactctgttaaccagcgtcttta < 1:7975074‑M1/35‑26 (MQ=255) aaGGGAGCCtgtactctgttaaccagcgtctttat < 1:2476837‑M1/35‑27 (MQ=255) aaGGGAGCCGATTAGCTCCCTGATGATATTAACTg < 1:17959457/35‑1 (MQ=255) aaGGGAGCCGATTAGCTCCCTGATGATATTAACTg < 1:15672896/35‑1 (MQ=255) aaGGGAGCCGATTAGCTCCCTGATGATATTAACTg < 1:710354/35‑1 (MQ=255) aaGGGAGCCGATTAGCTCCCTGATGATATTAACTg < 1:4059605/35‑1 (MQ=255) aaGGGAGCCGATTAGCTCCCTGATGATATTAACTg < 1:4093817/35‑1 (MQ=255) aaGGGAGCCGATTAGCTCCCTGATGATATTAACTg > 1:11442739/1‑35 (MQ=255) acggagCCtgtactctgttaaccagcgtctttatc < 1:16570588‑M1/33‑28 (MQ=255) aGGGAGCCGATTAGCTCCCTGATGATATTAACTgg < 1:3717485/35‑1 (MQ=255) aGGGAGCCGATTAGCTCCCTGATGATATTAACTgg > 1:19572403/1‑35 (MQ=255) aGGGAGCCGATTAGCTCCCTGATGATATTAACTgg > 1:10255539/1‑35 (MQ=255) gggAGCCtgtactctgttaaccagcgtctttatcg < 1:3895944‑M1/35‑29 (MQ=255) gggAGCCGATTAGCTCCCTGATGATATTAACTGGc > 1:347622/1‑35 (MQ=255) ggAGCCGATTAGCTCCCTGATGATATTAACTGGCt > 1:18847358/1‑35 (MQ=255) gAGCCtgtactctgttaaccagcgtctttatcgga > 1:6121388‑M1/1‑5 (MQ=255) gAGCCtgtactctgttaaccagcgtctttatcgga > 1:1339657‑M1/1‑5 (MQ=255) gAGCCtgtactctgttaaccagcgtctttatcgga < 1:20105244‑M1/35‑31 (MQ=255) gAGCCGATTAGCTCCCTGATGATATTAACTGGCtt < 1:19737394/35‑1 (MQ=255) aGCCtgtactctgttaaccagcgtctttatcggag > 1:4288182‑M1/1‑4 (MQ=255) aGCCGATTAGCTCCCTGATGATATTAACTGGCttt > 1:1000650/1‑35 (MQ=255) aGCCGATTAGCTCCCTGATGATATTAACTGGCttt < 1:1063032/35‑1 (MQ=255) aGCCGATTAGCTCCCTGATGATATTAACTGGCttt > 1:9517548/1‑35 (MQ=255) aGCCGATTAGCTCCCTGATGATATTAACTGGCttt < 1:19783342/35‑1 (MQ=255) aGCCGATTAGCTCCCTGATGATATTAACTGGCttt < 1:19165934/35‑1 (MQ=255) gCCtgtactctgttaaccagcgtctttatcggaga < 1:14335411‑M1/35‑33 (MQ=255) gCCGATTAGCTCCCTGATGATATTAACTGGCtttt < 1:9148499/35‑1 (MQ=255) gCCGATTAGCTCCCTGATGATATTAACTGGCtttt < 1:6454936/35‑1 (MQ=255) gCCGATTAGCTCCCTGATGATATTAACTGGCtttt < 1:15751603/35‑1 (MQ=255) gCCGATTAGCTCCCTGATGATATTAACTGGCtttt < 1:460336/35‑1 (MQ=255) cctgtactctgttaaccagcgtctttatcggagaa < 1:9069847‑M1/35‑34 (MQ=255) ccGATTAGCTCCCTGATTATATTAACTGGCttttt > 1:5356407/1‑35 (MQ=255) ccGATTAGCTCCCTGATGATATTAACTGGCttttt > 1:10949155/1‑35 (MQ=255) ccGATTAGCTCCCTGATGATATTAACTGGCttttt > 1:13062684/1‑35 (MQ=255) ccGATTAGCTCCCTGATGATATTAACTGGCttttt > 1:17640969/1‑35 (MQ=255) ccGATTAGCTCCCTGATGATATTAACTGGCttttt > 1:19361497/1‑35 (MQ=255) ctgtactctgttaaccagcgtctttatcggagaat < 1:11310259‑M1/35‑35 (MQ=255) ctgtactctgttaaccagcgtctttatcggagaat < 1:6807745‑M1/35‑35 (MQ=255) ctgtactctgttaaccagcgtctttatcggagaat < 1:6600453‑M1/35‑35 (MQ=255) ctgtactctgttaaccagcgtctttatcggagaat < 1:1988898‑M1/35‑35 (MQ=255) ctgtactctgttaaccagcgtctttatcggagaat < 1:4870847‑M1/35‑35 (MQ=255) cGATTAGCTCCCTGATGATATTAACTGGCtttttt < 1:1424821/35‑1 (MQ=255) cGATTAGCTCCCTGATGATATTAACTGGCtttttt > 1:16375256/1‑35 (MQ=255) cGATTAGCTCCCTGATGATATTAACTGGCtttttt > 1:12764970/1‑35 (MQ=255) cGATTAGCTCCCTGATGATATTAACTGGCtttttt > 1:2358391/1‑35 (MQ=255) | AAAGATTTCGGAATTAAAGGTAAAAAAAGGGAGCCGATTAGCTCCCTGATGATATTAACTGGCTTTTTT > REL606/1006191‑1006259 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |