New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 10617 = | 104 (1.010) | 21 (0.220) | 7/44 | NT | 21.3% | intergenic (‑125/+24) | yaaH/yaaW | conserved inner membrane protein associated with acetate transport/hypothetical protein |
? | REL606 | = 3622975 | 60 (0.640) | coding (1754/2619 nt) | yhjO | cellulose synthase, catalytic subunit |
Only 100 of 189 total aligned reads displayed.
TGGGGCAGTGTCTACGATCTTTTGAGGGGAAAATGAAAATTTTCCCCGGTTTACGGTGTCAGACCTGAG > REL606/10583‑10651 | tGGGTCAGTGTCTACGATCTTTTGAGGGgaaaatg > 1:10145972/1‑35 (MQ=255) tGGGGCAGTGTCTACGATCTTTTGAGGGgaaaatg < 1:16649807/35‑1 (MQ=255) tGGGGCAGTGTCTACGATCTTTTGAGGGgaaaatg < 1:4314094/35‑1 (MQ=255) accgtttcgtagatttcactccagaaagagtggcg < 1:1686012‑M1/1‑1 (MQ=255) accgtttcgtagatttcactccagaaagagtggcg > 1:7192534‑M1/35‑35 (MQ=255) accgtttcgtagatttcactccagaaagagtggcg > 1:13306068‑M1/35‑35 (MQ=255) ggggCAGTGTCTACGATCTTTTGAGGGgaaaatga < 1:16402407/35‑1 (MQ=255) ggggCAGTGTCTACGATCTTTTGAGGGgaaaatga < 1:19624211/35‑1 (MQ=255) ggggCAGTGTCTACGATCTTTTGAGGGgaaaaaga > 1:957332/1‑35 (MQ=255) ccgtttcgtagatttcactccagaaagagtggcGa < 1:12105496‑M1/2‑1 (MQ=255) ccgtttcgtagatttcactccagaaagagtggcGa < 1:6662738‑M1/2‑1 (MQ=255) ccgtttagtagatttcactccagaaagagtggcGa > 1:11028726‑M1/34‑35 (MQ=255) gggCAGTGTCTACGATCTTTTGAGGGgaaaatgaa > 1:17281119/1‑35 (MQ=255) cgtttcgtagatttcactccagaaagagtggcGaa < 1:6391249‑M1/3‑1 (MQ=255) gtttcgtagatttcactccagaaagagtggcGaaa < 1:5891703‑M1/4‑1 (MQ=255) gtttcgtagatttcactccagaaagagtggcGaaa < 1:8978910‑M1/4‑1 (MQ=255) gtttcgtagatttcactccagaaagagtggcGaaa < 1:9783298‑M1/4‑1 (MQ=255) ggCAGTGTCTACGATCTTTTGAGGGgaaaaagaaa > 1:16714706/1‑35 (MQ=255) tttcgtagatttcactccagaaagagtggcgaaat < 1:20338110‑M1/5‑2 (MQ=255) tttcgtagatttcactccagaaagagtggcGaaaa < 1:3471007‑M1/5‑1 (MQ=255) tttcgtagatttcactccagaaagagtggcGaaaa < 1:2189055‑M1/5‑1 (MQ=255) ttcgtagatttcactccagaaagagtggcGAAAAt < 1:15147801‑M1/6‑1 (MQ=255) tcgtagatttcactccagaaagagtggcgaaattt < 1:4602214‑M1/7‑4 (MQ=255) tcgtagatttcactccagaaagagtggcGAAAAtt < 1:3289514‑M1/7‑1 (MQ=255) gtgtCTACGATCTTTTGAGGGGAAAATGAAAAttt > 1:1930276/1‑35 (MQ=255) gtgtCTACGATCTTTTGAGGGGAAAATGAAAAttt < 1:11885002/35‑1 (MQ=255) cgtagatttcactccagaaatagtggcGAAAAttt < 1:5448265‑M1/8‑1 (MQ=255) cgtagatttcactccagaaagagtggcgaaaaatt < 1:4953566‑M1/8‑4 (MQ=255) cgtagatttcactccagaaagagtggcGAAAatta < 1:15618902‑M1/8‑2 (MQ=255) cgtagatttcactccagaaagagtggcGAAAAttt < 1:942644‑M1/8‑1 (MQ=255) tgtCTACGATCTTTTGAGGGGAAAATGAAAAtttt > 1:6240498/1‑35 (MQ=255) tgtCTACGATCTTTTGAGGGGAAAATGAAAAtttt > 1:6812487/1‑35 (MQ=255) tgtCTACGATCTTTTGAGGGGAAAATGAAAAtttt < 1:19972126/35‑1 (MQ=255) tgtCTACGATCTTTTGAGGGGAAAATGAAAAtttt > 1:15932100/1‑35 (MQ=255) tgtCTACGATCTTTTGAGGGGAAAATGAAAAtttt < 1:13924890/35‑1 (MQ=255) gtagatttcactccagaaagagtggcGAAAatttc < 1:16542000‑M1/9‑2 (MQ=255) gtagatttcactccagaaagagtggcGAAATtttt < 1:6098567‑M1/9‑1 (MQ=255) tagatttcactccagaaagagtggcGAAAATTTTc < 1:10903863‑M1/10‑1 (MQ=255) gtCTACGATCTTTTGAGGGGAAAATGAAAATTTTc < 1:19680265/35‑1 (MQ=255) gtCTACGATCTTTTGAGGGGAAAATGAAAATTTTc > 1:17659803/1‑35 (MQ=255) gtCTACGATCTTTTGAGGGGAAAATGAAAATTTTc < 1:6458521/35‑1 (MQ=255) tCTACGATCTTTTGAGGGGAAAATGAAAATTTTcc > 1:14288741/1‑35 (MQ=255) tCTACGATCTTTTGAGGGGAAAATGAAAATTTTcc < 1:2563051/35‑1 (MQ=255) tCTACGATCTTTTGAGGGGAAAATGAAAATTTTcc < 1:13160478/35‑1 (MQ=255) tCTACGATCTTTTGAGGGGAAAATGAAAATTTTcc < 1:11811230/35‑1 (MQ=255) tCTACGATCTTTTGAGGGGAAAATGAAAATTTTcc < 1:5207731/35‑1 (MQ=255) gatttcactccagaaagagtggcGAAAATTTtcct < 1:7390140‑M1/12‑2 (MQ=255) gatttcactccagaaagagtggcGAAAATTTtcct < 1:10737717‑M1/12‑2 (MQ=255) tACGATCTTTTGAGGGGAAAATGAAAATTTTcccc > 1:1372774/1‑35 (MQ=255) tACGATCTTTTGAGGGGAAAATGAAAATTTTcccc < 1:11498381/35‑1 (MQ=255) tACGATCTTTTGAGGGGAAAATGAAAATTTTcccc > 1:16147943/1‑35 (MQ=255) atttcactccagaaagagtggcGAAAATTTtccct < 1:5092523‑M1/13‑2 (MQ=255) atttcactccagaaagagtggcGAAAAATTtcccg < 1:3768284‑M1/13‑2 (MQ=255) aCGATCTTTTGAGGGGAAAATGAAAATTTTCCCCg > 1:15395417/1‑35 (MQ=255) ttcactccagaaagagtggcGAAAATTTTCCTCgg < 1:17159400‑M1/15‑1 (MQ=255) ttcactccagaaagagtggcGAAAATTTTCCTCgg < 1:834858‑M1/15‑1 (MQ=255) ttcactccagaaagagtggcGAAAATTTTCCCCgg < 1:7508146‑M1/15‑1 (MQ=255) cGATCTTTTGAGGGGAAAATGAAAATTTTCCCCgg < 1:8211929/35‑1 (MQ=255) cGATCTTTTGAGGGGAAAATGAAAATTTTCCCCgg < 1:11233517/35‑1 (MQ=255) cGATCTTTTGAGGGGAAAATGAAAATTTTCCCCgg > 1:3378192/1‑35 (MQ=255) gATCTTTTGAGGGGAAAATGAAAATTTTCCCCGGt > 1:1497212/1‑35 (MQ=255) gATCTTTTGAGGGGAAAATGAAAATTTTCCCCGGt > 1:11576418/1‑35 (MQ=255) aTCTTTTGAGGGGAAAATGAAAATTTTCCCCGGtt < 1:18643705/35‑1 (MQ=255) aTCTTTTGAGGGGAAAATGAAAATTTTCCCCGGtt > 1:4832923/1‑35 (MQ=255) aTCTTTTGAGGGGAAAATGAAAATTTTCCCCGGtt < 1:4247355/35‑1 (MQ=255) ttttGAGGGGAAAATGAAAATTTTCCCCGGTTTAc > 1:553631/1‑35 (MQ=255) ttttGAGGGGAAAATGAAAATTTTCCCCGGTTTAc < 1:10159850/35‑1 (MQ=255) ttttGAGGGGAAAATGAAAATTTTCCCCGGTTTAc < 1:1454758/35‑1 (MQ=255) tttGAGGGGAAAATGAAAATTTTCCCCGGTTTACg > 1:3403455/1‑35 (MQ=255) tttGAGGGGAAAATGAAAATTTTCCCCGGTTTACg < 1:14438122/35‑1 (MQ=255) ttGAGGGGAAAATGAAAATTTTCCCCGGTTTACgg < 1:17049500/35‑1 (MQ=255) tGAGGGGAAAATGAAAATTTTCCCCGGTTTACGgt < 1:7556041/35‑1 (MQ=255) tGAGGGGAAAATGAAAATTTTCCCCGGTTTACGgt < 1:13406754/35‑1 (MQ=255) gAGGGGAAAATGAAAATTTTCCCCGGTTTACGgtg < 1:16999081/35‑1 (MQ=255) gAGGGGAAAATGAAAATTTTCCCCGGTTTACGgtg > 1:1976060/1‑35 (MQ=255) gAGGGGAAAATGAAAATTTTCCCCGGTTTACGgtg > 1:18090510/1‑35 (MQ=255) aGGGGAAAATGAAAATTTTCCCCGGTTTACGgtgt > 1:8571733/1‑35 (MQ=255) aGGGGAAAATGAAAATTTTCCCCGGTTTACGgtgt > 1:15795811/1‑35 (MQ=255) ggggAAAATGAAAATTTTCCCCGGTTTACGGTGTc > 1:13787707/1‑35 (MQ=255) ggggAAAATGAAAATTTTCCCCGGTTTACGGTGTc > 1:13832920/1‑35 (MQ=255) gggAAAATGAAAATTTTCCCCGGTTTACGGTGTCa > 1:275065/1‑35 (MQ=255) gggAAAATGAAAATTTTCCCCGGTTTACGGTGTCa > 1:2310273/1‑35 (MQ=255) gggAAAATGAAAATTTTCCCCGGTTTACGGTGTCa < 1:18365059/35‑1 (MQ=255) ggAAAATGAAAATTTTCCCCGGTTTACGGTGTCAg < 1:7066592/35‑1 (MQ=255) gaaaatgaaaatTTTCCCCGGTTTACGGTGTCAGa < 1:9920556/35‑1 (MQ=255) gaaaatgaaaatTTTCCCCGGTTTACGGTGTCAGa > 1:17472408/1‑35 (MQ=255) gaaaatgaaaatTTTCCCCGGTTTACGGTGTCAGa > 1:15370358/1‑35 (MQ=255) aaaatgaaaatTTTCCCCGGTTTACGGTGTCAGAc < 1:14686921/35‑1 (MQ=255) aaatgaaaatTTTCCCCGGTTTACGGTGTCAGAcc > 1:10562974/1‑35 (MQ=255) aaatgaaaatTTTCCCCGGTTTACGGTGTCAGAcc < 1:1282164/35‑1 (MQ=255) aaatgaaaatTTTCCCCGGTTTACGGTGTCAGAcc > 1:17038330/1‑35 (MQ=255) aaatgaaaatTTTCCCCGGTTTACGGTGTCAGAcc > 1:14772127/1‑35 (MQ=255) aaatgaaaatTTTCCCCGGTTTACGGTGTCAGAcc > 1:16327195/1‑35 (MQ=255) aatgaaaatTTTCCCCGGTTTACGGTGTCAGACCt > 1:8191070/1‑35 (MQ=255) aatgaaaatTTTCCCCGGTTTACGGTGTCAGACCt < 1:17557991/35‑1 (MQ=255) aatgaaaatTTTCCCCGGTTTACGGTGTCAGACCt < 1:1780748/35‑1 (MQ=255) atgaaaatTTTCCCCGGTTTACGGTGTCAGACCTg > 1:9188416/1‑35 (MQ=255) atgaaaatTTTCCCCGGTTTACGGTGTCAGACCTg < 1:12853073/35‑1 (MQ=255) GAAAATTTTCCCCGGTTTACGGTGTCAGACCTGAg > 1:7118710‑M1/1‑35 (MQ=255) GAAAATTTTCCCAGGTTTACGGTGTCAGACCTGAg > 1:5615979‑M1/1‑35 (MQ=255) | TGGGGCAGTGTCTACGATCTTTTGAGGGGAAAATGAAAATTTTCCCCGGTTTACGGTGTCAGACCTGAG > REL606/10583‑10651 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |