New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1609469 = | 55 (0.540) | 5 (0.060) | 3/42 | NT | 9.8% | coding (36/207 nt) | ybcW | predicted protein |
? | REL606 | 2545121 = | 44 (0.490) | coding (1259/2067 nt) | ppk | polyphosphate kinase |
AATGCATAAAGATCAATACACTGATGCCCCCTCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1609505‑1609469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGG > REL606/2545121‑2545154 AATGCATAAAGATCAATACACTGATGCCCCCTCCC < 1:10816509/35‑1 AATGCATAAAGATCAATACACTGATGCCCCCTCCC > 1:7942152/1‑35 ATGCATAAAGATCAATACACTGATGCCCCCTCCCA < 1:3512074/35‑1 gCCCCTGCCAGAAGCAGGCGTGCACGTTATCTTCT < 1:6431477/34‑1 ccgCCTCCCAGAAGCAGGCGTGCACGTTATCTTCT < 1:10682974/32‑1 CCCCCTGCCAGAAGCAGGCGTGCACGTTATCTTCT < 1:9476731/35‑1 CCCCCTCCCAGAAGCAGGCGTGCACGTTATCTTCT < 1:9340590/35‑1 CCCCTCCCAGAAGCAGGCGTGCACGTTATCTTCTC < 1:6756755/35‑1 CCCTGCCAGAAGCAGGCGTGCACGTTATCTTCTCT < 1:17710880/35‑1 ccgCCCAGAAGCAGGCGTGCACGTTATCTTCTCTG < 1:3444392/32‑1 CCTGCCAGAAGCAGGCGTGCACGTTATCTTCTCTG < 1:10828342/35‑1 ctgCCAGAAGCAGGCGTGCACGTTATCTTCTCTGC < 1:16247093/32‑1 CTCCCAGAAGCAGGCGTGCACGTTATCTTCTCTGC < 1:12419557/35‑1 CTCCCAGAAGCAGGCGTGCACGTTATCTTCTCTGC < 1:9277082/35‑1 CTCCCAGAAGCAGGCGTGCACGTTATCTTCTCTGC < 1:1431097/35‑1 tgCCAGAAGCAGGCGTGCACGTTATCTTCTCTGCG < 1:9413159/33‑1 tgCCAGAAGCAGGCGTGCACGTTATCTTCTCTGCG < 1:5585775/33‑1 cgCCAGAAGCAGGCGTGCACGTTATCTTCTCTGCG < 1:15462533/33‑1 TCCCAGAAGCAGGCGTGCACGTTATCTTCTCTGCG < 1:3755660/35‑1 TCCCAGAAGCAGGCGTGCACGTTACCTTCTCTGCG < 1:10785066/35‑1 aCCAGAAGCAGGCGTGCACGTTATCTTCTCTGCGC < 1:19660272/34‑1 CCCAGAAGCAGGCGTGCACGTTATCTTCTCTGCGC < 1:7420024/35‑1 CCAGAAGCAGGCGTGCACGTTATCTTCTCTGCGCC < 1:11960714/35‑1 CCAGAAGCAGGCGTGCACGTTATCTTCTCTGCGCC < 1:8438448/35‑1 CCAGAAGCAGGCGTGCACGTTATCTTCTCTGCGCC < 1:8241151/35‑1 CCAGAAGCAGGCGTGCACGTTATCTTCTCTGCGCC < 1:16472067/35‑1 CAGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCG < 1:1236060/35‑1 CAGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCG > 1:13175194/1‑35 CAGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCG > 1:13259693/1‑35 CAGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCG > 1:16068402/1‑35 CAGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCG > 1:6265230/1‑35 CAGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCG < 1:16874693/35‑1 CAGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCG > 1:18488758/1‑35 AGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGG < 1:11633055/35‑1 AGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGG > 1:9290921/1‑35 AGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGG < 1:17756231/35‑1 AGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGG < 1:12677065/35‑1 GAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGG > 1:7237557/1‑35 GAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGG > 1:4474336/1‑35 GAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGG > 1:8718516/1‑35 GAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGG < 1:9146927/35‑1 GAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGG < 1:17561066/35‑1 AATGCATAAAGATCAATACACTGATGCCCCCTCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1609505‑1609469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGG > REL606/2545121‑2545154 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |