New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2204224 | 68 (0.660) | 16 (0.200) | 4/38 | NT | 14.9% | coding (1109/1251 nt) | yeiJ | predicted nucleoside transporter |
? | REL606 | 2724133 = | 129 (1.590) | coding (227/774 nt) | srlR | DNA‑bindng transcriptional repressor |
Only 100 of 176 total aligned reads displayed.
TGGCGCAACCGCAGAAAACGCCCCCACCACCACCCCGATAGAACCAAAGTTAGCGAAACCGCACAACGC > REL606/2204190‑2204258 | cgcAACCGCAGAAAACGCCCCCACCACCACCCCGa > 1:9700435/1‑35 (MQ=255) gcAACCGCAGAAAACGCCCCCACCACCACCCCGAt > 1:7844673/1‑35 (MQ=255) cAACCGCAGAAAACGCCCCCACCACCACCCCGATa > 1:16867805/1‑35 (MQ=255) acccGCAGAACCCCCCCCCCCCACCACCCCGATAg < 1:17712748/33‑1 (MQ=255) aaCCGCAGAAAACGCCCCCACCACCACCCCGATAg > 1:4413368/1‑35 (MQ=255) ccGCAGAAAACGCCCCCACCACCACCCCGATAGaa > 1:8055716/1‑35 (MQ=255) ccGCAGAAAACGCCCCCACCACCACCCCGATAGaa > 1:13372357/1‑35 (MQ=255) cGCAGAAAACGCCCCCACCACCACCCCGATAGAAc > 1:10092268/1‑35 (MQ=255) cGCAGAAAACGCCCCCACCACCACCCCGATAGAAc > 1:13057612/1‑35 (MQ=255) gCAGAAAACGCCCCCACCACCACCCCGATAGAAcc > 1:10363270/1‑35 (MQ=255) gCAGAAAACGCCCCCACCACCACCCCGATAGAAcc > 1:10680149/1‑35 (MQ=255) gCAGAAAACGCCCCCACCACCACCCCGATAGAAcc > 1:9183944/1‑35 (MQ=255) cAGAAAACGCCCCCACCACCACCCCGATAGAACCa > 1:3200427/1‑35 (MQ=255) cAGAAAACGCCCCCACCACCACCCCGATAGAACCa > 1:18668214/1‑35 (MQ=255) cAGAAAACGCCCCCACCACCACCCCGATAGAACCa > 1:10008196/1‑35 (MQ=255) aaaaaaaCCCCCCCACCACCACCCCGATAGAACCa < 1:4248662/32‑1 (MQ=38) aaaCGCCCCCACCACCACCCCGATAGAACCAAAGt > 1:16502107/1‑35 (MQ=255) aaaCGCCCCCACCACCACCCCGATAGAACCAAAGt > 1:12985461/1‑35 (MQ=255) aCGCCCCCACCACCACCCCGATAGAACCAAAGTTa > 1:13313819/1‑35 (MQ=255) ccccCCCACCACCCCGATAGAACCAAAGTTAGCGa < 1:17372139/35‑1 (MQ=255) ccccACCACCACCCCGATAGAACCAAAGTTAGCGa > 1:10901143/1‑35 (MQ=255) ccccAACACCACCCacaagaaagagctgattgcag < 1:9642691‑M1/35‑22 (MQ=255) cccCCCACCACCCCGATAGAACCAAAGTTAGCGaa < 1:5475519/35‑1 (MQ=255) cccATCACCACCCacaagaaagagctgattgcaga < 1:3447136‑M1/35‑23 (MQ=255) cacacccccacCCCGATAGAACAAAAGTTAGCGaa < 1:5884427/33‑1 (MQ=21) tcaccaccaccCacaagaaagggctgattgcagaa < 1:18460529‑M1/34‑24 (MQ=255) tcaccaccaccCacaagaaagagctgattgcagaa < 1:1740997‑M1/34‑24 (MQ=255) ccaccaccaCCCacaagaaagagctgattgcagaa < 1:1120109‑M1/35‑24 (MQ=255) ccaccaccaCCCacaagaaagagctgattgcagaa < 1:12108993‑M1/35‑24 (MQ=255) ccaccaccaCCCacaagaaagagctgattgcagaa < 1:6544750‑M1/35‑24 (MQ=255) ccaccaccaCCCCGATAGAACCAAAGTTAGCGaaa > 1:9251125/1‑35 (MQ=255) catcaccacccacaagaaagagctgattgcagaag < 1:8542538‑M1/32‑25 (MQ=255) catcaccacccacaagaaagagctgattgcagaag < 1:10436221‑M1/32‑25 (MQ=255) caccaccacCCCGATAGAACCAACGTTAGCGAAAc > 1:2546964/1‑35 (MQ=255) caccaccacCCCGATAGAACCAAAGTTAGCGAAAc > 1:8192012/1‑35 (MQ=255) caccaccacCCCGATAGAACCAAAGTTAGCGAAAc > 1:20505222/1‑35 (MQ=255) caccaccacCCCGATAGAACCAAAGTTAGCGAAAc > 1:7302032/1‑35 (MQ=255) accaccaccCacaagaaagagctgattgcagaagc < 1:5664325‑M1/35‑26 (MQ=255) accaccaccCCGATAGAACCAAAGTTAGCGAAAcc > 1:16032444/1‑35 (MQ=255) acaaccacccacaagaaagagctgattgcagaagc < 1:3756991‑M1/32‑26 (MQ=255) tcaccacccacaagaaagagctgattgcagaagct < 1:10118614‑M1/34‑27 (MQ=255) cccccacccacaagaaagagctgattgcagaagct < 1:15432459‑M1/32‑27 (MQ=255) ccaccaccCacaagaaagagctgattgcagaagct < 1:4913352‑M1/35‑27 (MQ=255) ccaccaccCCGATAGAACCAAAGTTAGCGAAACCg < 1:19329319/35‑1 (MQ=255) ccaccaccCCGATAGAACCAAAGTTAGCGAAACCg < 1:1584781/35‑1 (MQ=255) ccaccaccCCGATAGAACCAAAGTTAGCGAAACCg > 1:15276073/1‑35 (MQ=255) ccaccaccCCGATAGAACCAAAGTTAGCGAAACCg > 1:14503940/1‑35 (MQ=255) ccaccaccCCGATAGAAACAAAGTTAGCGAAACCg < 1:14269662/35‑1 (MQ=255) acaccacccacaagaaagagctgattgcagaagct < 1:1620751‑M1/34‑27 (MQ=255) acaccacccacaagaaagagctgattgcagaagct < 1:19724864‑M1/34‑27 (MQ=255) ccccacccacaagaaagagctgattgcagaagctg < 1:7554545‑M1/33‑28 (MQ=255) caccaccCacaagaaagagctgattgcagaagctg < 1:5060007‑M1/35‑28 (MQ=255) caccaccCacaagaaagagctgattgcagaagctg < 1:12295169‑M1/35‑28 (MQ=255) caccaccCCGATAGAACCAAAGTTAGCGAAACCGc > 1:2347179/1‑35 (MQ=255) caccaccCCGATAGAACCAAAGTTAGCGAAACCGc > 1:15631413/1‑35 (MQ=255) cccaaccacaagaaagagctgattgcagaagctgc < 1:3407889‑M1/34‑29 (MQ=255) accgccCacaagaaagagctgattgcagaagctgc < 1:3608933‑M1/35‑29 (MQ=255) accaccCacaagaaagagctgattgcagaagctgc < 1:2378930‑M1/35‑29 (MQ=255) accaccCacaagaaagagctgattgcagaagctgc < 1:7156724‑M1/35‑29 (MQ=255) accaccCacaagaaagagctgattgcagaagctgc < 1:18071998‑M1/35‑29 (MQ=255) accaccCacaagaaagagctgattgcagaagctgc < 1:1148497‑M1/35‑29 (MQ=255) accaccCCGATAGAACCAAAGTTAGCGAAACCGca < 1:11811744/35‑1 (MQ=255) accaccCCGATAGAACCAAAGTTAGCGAAACCGca > 1:11675324/1‑35 (MQ=255) ccacccacaagaaagagctgattgcagaagctgcc < 1:8252350‑M1/35‑30 (MQ=255) ccacccacaagaaagagctgattgcagaagctgcc < 1:10603636‑M1/35‑30 (MQ=255) ccacccacaagaaagagctgattgcagaagctgcc < 1:15895606‑M1/35‑30 (MQ=255) ccaccCCGATAGAACCAAAGTTAGCGAAACCGcac > 1:1644565/1‑35 (MQ=255) ccaccCAGATAGAACCAAAGTTAGCGAAACCGcac < 1:12910899/35‑1 (MQ=255) cccccacaagaaagagctgattgcagaagctgccg < 1:11721494‑M1/33‑31 (MQ=255) cacccacaagaaagagctgattgcagaagctgccg > 1:1322899‑M1/1‑5 (MQ=255) cacccacaagaaagagctgattgcagaagctgccg > 1:4678642‑M1/1‑5 (MQ=255) cacccacaagaaagagctgattgcagaagctgccg > 1:16153222‑M1/1‑5 (MQ=255) caccCCGATAGAACCAAAGTTAGCGAAACCGcaca < 1:927235/35‑1 (MQ=255) caccCCGATAGAACCAAAGTTAGCGAAACCGcaca > 1:7645782/1‑35 (MQ=255) caccCCGATAGAACCAAAGTTAGCGAAACCGcaca > 1:6305471/1‑35 (MQ=255) caccCCGATAGAACCAAAGTTAGCGAAACCGcaca < 1:8614367/35‑1 (MQ=255) acccacaagaaagagctgattgcagaatctgccgt > 1:4581886‑M1/1‑4 (MQ=255) accCCGATAGAACCAAAGTTAGCGAAACCGCACaa > 1:15312081/1‑35 (MQ=255) accCCGATAGAACCAAAGTTAGCGAAACCGCACaa < 1:19987528/35‑1 (MQ=255) accCCGATAGAACCAAAGTTAGCGAAACCGCACaa > 1:20293245/1‑35 (MQ=255) ccccGATAGAACCAAAGTTAGCGAAACCGCACAAc < 1:14445748/35‑1 (MQ=255) ccccGATAGAACCAAAGTTAGCGAAACCGCACAAc < 1:10205745/35‑1 (MQ=255) cccacaagaaagagctgattgcagaagctgccgtt > 1:9844502‑M1/1‑3 (MQ=255) cccGATAGAACCAAAGTTAGCGAAACCGCACAAcg < 1:12700801/35‑1 (MQ=255) cccGATAGAACCAAAGTTAGCGAAACCGCACAAcg < 1:1766464/35‑1 (MQ=255) cccGATAGAACCAAAGTTAGCGAAACCGCACAAcg < 1:8920206/35‑1 (MQ=255) cccGATAGAACCAAAGTTAGCGAAACAGCACAAcg < 1:340273/35‑1 (MQ=255) ccacaagaaagagctgattgcagaagctgccgtta > 1:6633581‑M1/1‑2 (MQ=255) ccacaagaaagagctgattgcagaagctgccgtta > 1:2264338‑M1/1‑2 (MQ=255) ccacaagaaagagctgattgcagaagctgccgtta > 1:19168125‑M1/1‑2 (MQ=255) ccGATAGAACCAAAGTTAGCGAAACCGCACAAcgc > 1:14415821/1‑35 (MQ=255) ccGATAGAACCAAAGTTAGCGAAACCGCACAAcgc < 1:1474217/35‑1 (MQ=255) ccGATAGAACCAAAGTTAGCGAAACCGCACAAcgc > 1:15577953/1‑35 (MQ=255) ccGATAGAACCAAAGTTAGCGAAACCGCACAAcgc < 1:17078522/35‑1 (MQ=255) ccGATAGAACCAAAGTTAGCGAAACCGCACAAcgc < 1:6513460/35‑1 (MQ=255) ccGATAGAACCAAAGTTAGCGAAACCGCACAAcgc > 1:6924699/1‑35 (MQ=255) cacaagaaagagctgattgcagaagctgccgttag > 1:3776169‑M1/1‑1 (MQ=255) cacaagaaagagctgattgcagaagctgccgttag > 1:6205350‑M1/1‑1 (MQ=255) cacaagaaagagctgattgcagaagctgcagttag < 1:20231013‑M1/35‑35 (MQ=255) cacaagaaagagctgattgcagaagctgcagttag < 1:11090239‑M1/35‑35 (MQ=255) | TGGCGCAACCGCAGAAAACGCCCCCACCACCACCCCGATAGAACCAAAGTTAGCGAAACCGCACAACGC > REL606/2204190‑2204258 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |