New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2095315 = | 91 (0.890) | 5 (0.070) | 3/34 | NT | 6.2% | coding (744/1416 nt) | yegB | multidrug efflux system protein |
? | REL606 | 2237509 = | 87 (1.200) | intergenic (+34/+69) | proL/yejO | tRNA‑Pro/predicted autotransporter outer membrane protein |
Only 100 of 104 total aligned reads displayed.
TACGAGTACGGAACAGTTTCAGACTGAACAGGGCACGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2095355‑2095315 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggttgGTTTTTTTATATCTGCAATTAATTCGATAAACAG > REL606/2237509‑2237542 TACGAGTACGGAACAGTTTCAGACTGAACAGGGCA < 1:3004193/35‑1 TACGAGTACGGAACAGTTTCAGACTGAACAGGGCA > 1:7649906/1‑35 TACGAGTACGGAACAGTTTCAGACTGAACAGGGCA < 1:1345408/35‑1 TACGAGTACGGAACAGTTTCAGACTGAACAGGGCA > 1:11377216/1‑35 accAGTACGGAACAGTTTCAGACTGAACAGGGCAC < 1:13194873/32‑1 ACGAGTACGGAACAGTTTCAGACTGAACAGGGCAC > 1:16893549/1‑35 ACGAGTACGGAACAGTTTCAGACTGAACAGGGCAC > 1:18062038/1‑35 ACGAGTACGGAACAGTTTCAGACTGAACAGGGCAC < 1:15552662/35‑1 ACGAGTACGGAACAGTTTCAGACTGAACAGGGCAC > 1:4540093/1‑35 ACGAGTACGGAACAGTTTCAGACTGAACAGGGCAC > 1:4581323/1‑35 ACGAGTACGGAACAGTTTCAGACTGAACAGGGCAC < 1:10573846/35‑1 ACGAGTACGGAACAGTTTCAGACTGAACAGGGCAC < 1:11650861/35‑1 ACGAGTACGGAACAGTTTCAGACTGAACAGGGCAC < 1:9117664/35‑1 ACGAGTACGCAACAGTTTCAGACTGAACAGGGCAC > 1:19186679/1‑35 CGAGTACGGAACAGTTTCAGACTGAACAGGGCACG > 1:11915357/1‑35 CGAGTACGGAACAGTTTCAGACTGAACAGGGCACG < 1:10685148/35‑1 CGAGTACGGAACAGTTTCAGACTGAACAGGGCACG > 1:5774356/1‑35 CGAGTACGGAACAGTTTCAGACTGAACAGGGCACG > 1:5578394/1‑35 GAGTACGGAACAGTTTCAGACTGAACAGGGCACGG > 1:14720856/1‑35 GAGTACGGAACAGTTTCAGACTGAACAGGGCACGG < 1:17969401/35‑1 GAGTACGGAACAGTTTCAGACTGAACAGGGCACGG > 1:14024768/1‑35 GAGTACGGAACAGTTTCAGACTGAACAGGGCACGG < 1:17353235/35‑1 GAGTACGGAACAGTTTCAGACTGAACAGGGCACGG > 1:6202537/1‑35 AGTACGGAACAGTTTCAGACTGAACAGGGCACGGT < 1:36964/35‑1 GTACGGAACAGTTTCAGACTGAACAGGGCACGGTT > 1:11161241/1‑35 GTACGGAACAGTTTCAGACTGAACAGGGCACGGTT < 1:6626307/35‑1 GTACGGAACAGTTTCAGACTGAACAGGGCACGGTT < 1:19512827/35‑1 GTACGGAACAGTTTCAGACTGAACAGGGCACGGTT > 1:638032/1‑35 TACGGAACAGTTTCAGACTGAACAGGGCACGGTTG > 1:10599307/1‑35 TACGGAACAGTTTCAGACTGAACAGGGCACGGTTG > 1:3974386/1‑35 TACGGAACAGTTTCAGACTGAACAGGGCACGGTTG < 1:451315/35‑1 TACGGAACAGTTTCAGACTGAACAGGGCACGGTTG > 1:13515114/1‑35 accGAACAGTTTCAGACTGAACAGGGCACGGTTGG > 1:18294148/4‑35 ACGGAACAGTTTCAGACTGAACAGGGCACGGTTGG > 1:14313173/1‑35 ACGGAACAGTTTCAGACTGAACAGGGCACGGTTGG > 1:6561125/1‑35 CGGAACAGTTTCAGACTGAACAGGGCACGGTTGGg > 1:20196824/1‑34 CGGAACAGTTTCAGACTGAACAGGGCACGGTTGGT > 1:18409361/1‑35 CGGAACAGTTTCAGACTGAACAGGGCACGGTTGGT > 1:9254696/1‑35 GGAACAGTTTCAGACTGAACAGGGCACGGTTGGgt > 1:3419362/1‑33 GGAACAGTTTCAGACTGAACAGGGCACGGTTGGTa > 1:4503982/1‑34 GGAACAGTTTCAGACTGAACAGGGCACGGTTGGTa > 1:18105907/1‑34 GAACAGTTTCAGACTGAACAGGGCACGGTTGGTat > 1:7319990/1‑33 GAACAGTTTCAGACTGAACAGGGCACGGTTGGTat > 1:13086870/1‑33 AACAGTTTCAGACTGAACAGGGCACGGTTGGTATT > 1:4398041/1‑35 AACAGTTTCAGACTGAACAGGGCACGGTTGGTATT > 1:4710812/1‑35 ACAGTTTCAGACTGAACAGGGCACGGTTGGTTTTT > 1:65060/1‑35 ACAGTTTCAGACTGAACAGGGCACGGTTGGTATTT > 1:15265119/1‑35 CAGTTTCAGACTGAACAGGGCACGGTTGGTTTTTT > 1:6996649/1‑35 AGTTTCAGACTGAACAGGGCACGGTTGGTTTTTTT > 1:8395813/1‑35 TTTCAGACTGAACAGGGCACGGTTGGTTTTTTTgg > 1:1281168/1‑33 ACGGTTGGTTTTTTTATATCTGCAATTAATTCGAT < 1:307916/35‑1 ACGGTTGGTTTTTTTATATCTGCAATTAATTCGAT < 1:3404385/35‑1 ACGGTTGGTTTTTTTATATCTGCAATTAATTCGAT > 1:16024168/1‑35 ACGGTTGGTTTTTTTATATCTGCAATTAATTCGAT > 1:16519847/1‑35 ACGGTTGGTTTTTTTATATCTGCAATTAATTCGAT > 1:17995204/1‑35 ACGGTTGGTTTTTTTATATCTGCAATTAATTCGAT < 1:6888908/35‑1 ACGGTTGGTTTTTTTATATCTGCAATTAATTCGAT > 1:8251212/1‑35 ACGGTTGGTTTTTTTATATCAGCAATTAATTCGAT > 1:1538121/1‑35 ACGGTTGGGTTTTTTATATCTGCAATTAATTCGAT > 1:14913557/1‑35 CGGTTGGTTTTTTTATATCTGCAATTAATTCGATA > 1:14333874/1‑35 CGGTTGGTTTTTTTATATCTGCAATTAATTCGATA < 1:12438530/35‑1 CGGTTGGTTTTTTTATATCTGCAATTAATTCGATA < 1:10849157/35‑1 CGGTTGGTTTTTTTATATCTGCAATTAATTCGATA > 1:1057540/1‑35 CGGTTGGTTTTTTTATATCTGCAATTAATTCGATA < 1:36665/35‑1 CGGTTGGTTTTTTTATATCTGCAATTAATTCGATA < 1:16264932/35‑1 CGGTTGGTTTTTTTATATCTGCAATTAATTCGATA > 1:18604130/1‑35 GGTTGGTTTTTTTATATCTGCAATTAATTCGATAA < 1:7767437/35‑1 GGTTGGTTTTTTTATATCTGCAATTAATTCGATAA > 1:11531017/1‑35 GGTTGGTTTTTTTATATCTGCAATTAATTCGATAA > 1:11781561/1‑35 GGTTGGTTTTTTTATATCTGCAATTAATTCGATAA > 1:6397897/1‑35 GGTTGGTTTTTTTATATCTGCAATTAATTCGATAA < 1:6062511/35‑1 GGTTGGTTTTTTTATATCTGCAATTAATTCGATAA > 1:5140690/1‑35 GGTTGGTTTTTTTATATCTGCAATTAATTCGATAA < 1:17077031/35‑1 GGTTGGTTTTTTTATATCTGCAATTAATTCGATAA > 1:15500457/1‑35 GGTTGGTTTTTTTATATCTGCAATTAATTCGATAA > 1:9216186/1‑35 GTTGGTTTTTTTATATCTGCAATTAATTCGATAAA < 1:11004850/35‑1 GTTGGTTTTTTTATATCTGCAATTAATTCGATAAA > 1:9019755/1‑35 GTTGGTTTTTTTATATCTGCAATTAATTCGATAAA < 1:17492287/35‑1 GTTGGTTTTTTTATATCTGCAATTAATTCGATAAA > 1:8092214/1‑35 TTGGTTTTTTTATATCTGCAATTAATTCGATAAAC < 1:13375273/35‑1 TTGGTTTTTTTATATCTGCAATTAATTCGATAAAC < 1:344660/35‑1 TTGGTTTTTTTATATCTGCAATTAATTCGATAAAC > 1:15962640/1‑35 TTGGTTTTTTTATATCTGCAATTAATTCGATAAAC < 1:6954425/35‑1 TGGTTTTTTTATATCTGCAATTAATTCGATAAACA > 1:16756586/1‑35 TGGTTTTTTTATATCTGCAATTAATTCGATAAACA > 1:4399818/1‑35 TGGTTTTTTTATATCTGCAATTAATTCGATAAACA > 1:20225059/1‑35 TGGTTTTTTTATATCTGCAATTAATTCGATAAACA < 1:18867536/35‑1 TGGTTTTTTTATATCTGCAATTAATTCGATAAACA > 1:19359347/1‑35 GGTTTTTTTATATCTGCAATTAATTCGATAAACAG > 1:17387306/1‑35 GGTTTTTTTATATCTGCAATTAATTCGATAAACAG > 1:17009291/1‑35 GGTTTTTTTATATCTGCAATTAATTCGATAAACAG < 1:7722759/35‑1 GGTTTTTTTATATCTGCAATTAATTCGATAAACAG > 1:7682232/1‑35 GGTTTTTTTATATCTGCAATTAATTCGATAAACAG < 1:17427081/35‑1 GGTTTTTTTATATCTGCAATTAATTCGATAAACAG < 1:1672449/35‑1 GGTTTTTTTATATCTGCAATTAATTCGATAAACAG < 1:6619667/35‑1 GGTTTTTTTATATCTGCAATTAATTCGATAAACAG > 1:16656369/1‑35 GGTTTTTTTATATCTGCAATTAATTCGATAAACAG > 1:12647544/1‑35 GGTTTTTTTATATCTGCAATTAATTCGATAAACAG > 1:5086809/1‑35 GGTTTTTTTATATCTGCAATTAATTCGATAAACAG > 1:15442679/1‑35 GGTTTTTTTATATCTGCAATTAATTCGATAAACAG > 1:434277/1‑35 TACGAGTACGGAACAGTTTCAGACTGAACAGGGCACGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2095355‑2095315 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggttgGTTTTTTTATATCTGCAATTAATTCGATAAACAG > REL606/2237509‑2237542 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |