New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 280732 | 59 (0.570) | 9 (0.120) | 3/36 | NT | 14.3% | coding (170/636 nt) | yagZ | hypothetical protein |
? | REL606 | 3006460 = | 64 (0.830) | coding (470/819 nt) | yafZ | conserved protein |
Only 100 of 127 total aligned reads displayed.
CTACCGAGTGGCGTCACAACCAGCTTACTGGTGGTGTCTTTTTTGGCTGTTGCCGACCAGGTCGCTAC > REL606/280699‑280766 | cTACCGAGTGGCGTCACAACCAGCTTACTggtggt < 1:15557380/35‑1 (MQ=255) cTACCGAGTGGCGTCACAACCAGCTTACTGGTGGg > 1:8935544‑M1/1‑34 (MQ=255) cTACCGAGTGGCGTCACAACCAGCTTACTGGTGGg > 1:343667‑M1/1‑34 (MQ=255) cTACCGAGTGGCGTCACAACCAGCTTACTGGTGGg > 1:17894568‑M1/1‑34 (MQ=255) tACCGAGTGGCGTCACAACCAGCTTACTGttggtg > 1:1653336/1‑35 (MQ=255) tACCGAGTGGCGTCACAACCAGCTTACTGgtggtg < 1:14723796/35‑1 (MQ=255) tACCGAGTGGCGTCACAACCAGCTTACTGgtggtg < 1:7810971/35‑1 (MQ=255) tACCGAGTGGCGTCACAACCAGCTTACTGgtggtg < 1:4230438/35‑1 (MQ=255) tACCGAGTGGCGTCACAACCAGCTTACTGgtggtg < 1:19122560/35‑1 (MQ=255) aCCGAGTGGCGTCACAACCAGCTTACTGGTGgtgt < 1:19867269/35‑1 (MQ=255) aCCGAGTGGCGTCACAACCAGCTTACTGGTGGggt > 1:16570351‑M1/1‑32 (MQ=255) ccGAGTGGCGTCACAACCAGCTTACTGGTGGTGTc < 1:7426596/35‑1 (MQ=255) cGAGTGGCGTCACAACCAGCTTACTGGTGGgggtt > 1:2537491‑M1/1‑30 (MQ=255) cGAGTGGCGTCACAACCAGCTTACTGGTGGggggt > 1:19407746‑M1/1‑30 (MQ=255) cGAGTGGCGTCACAACCAGCTTACTGGTGGggggt > 1:8499616‑M1/1‑30 (MQ=255) cGAGTGGCGTCACAACCAGCTTACTGGTGGgggct > 1:12445509‑M1/1‑30 (MQ=255) cGAGTGGCGTCACAACCAGCTTACTGGTGGTGTCt < 1:16757731/35‑1 (MQ=255) cGAGTGGCGTCACAACCAGCTTACTGGTGGTGTCt < 1:5018005/35‑1 (MQ=255) gAGTGGCGTCACAACCAGCTTACTGGTGGggggtt > 1:9528882‑M1/1‑29 (MQ=255) gAGTGGCGTCACAACCAGCTTACTGGTGGgggctt > 1:12730413‑M1/1‑29 (MQ=255) gAGTGGCGTCACAACCAGCTTACTGGTGGgggctt > 1:15050773‑M1/1‑29 (MQ=255) gAGTGGCGTCACAACCAGCTTACTGGTGGgggctt > 1:20433674‑M1/1‑29 (MQ=255) gAGTGGCGTCACAACCAGCTTACTGGTGGGGTCtt > 1:6841088/1‑35 (MQ=255) gAGTGGCCTCACAACCAGCTTACTGGTGGTGTCtt < 1:19159239/35‑1 (MQ=255) aGTGGCGTCACAACCAGCTTACTTGTGGTGTCttt > 1:3621585/1‑35 (MQ=255) aGTGGCGTCACAACCAGCTTACTGGTGGgggtttt > 1:3750931‑M1/1‑28 (MQ=255) aGTGGCGTCACAACCAGCTTACTGGTGGTGTCttt < 1:6287532/35‑1 (MQ=255) gTGGCGTCACAACCAGCTTACTGGTGGgggttttt > 1:8247623‑M1/1‑27 (MQ=255) tGGCGTCACAACCAGCTTACTGGTGGTGTCttttt < 1:7654414/35‑1 (MQ=255) tGGCGTCACAACCAGCTTACTGGTGGTGTCttttt < 1:12778995/35‑1 (MQ=255) tGGCGTCACAACCAGCTTACTGGTGGGGNGttttn > 1:5882784/1‑34 (MQ=37) ggCGTCACAACCAGCTTACTGGTGGTGTCtttttt < 1:16773556/35‑1 (MQ=255) ggCGTCACAACCAGCTTACTGGTGGTGTCtttttt < 1:9433015/35‑1 (MQ=255) ggCGTCACAACCAGCTTACTGGTGGGGGCtttttt > 1:12988705/1‑35 (MQ=38) gCGTCCCAACCAGCTTACTGGTGGTGTCTTTTTTg < 1:20445495/35‑1 (MQ=255) cGTCCCAACCAGCTTACTGGTGGTGTCTTTTTTgg < 1:17868249/35‑1 (MQ=255) cGTCACAACCAGCTTACTGGTGGTGTCTTTTTTgg < 1:17704005/35‑1 (MQ=255) cGTCACAACCAGCTTACTGGTGGTGTCTTTTTTgg < 1:13119885/35‑1 (MQ=255) cGTCACAACCAGCTTACTGGTGGTGTCTTTTTTgg < 1:2635166/35‑1 (MQ=255) cGTCACAACCAGCTTACTGGTGGTGTCTTTTTTgg < 1:4705730/35‑1 (MQ=255) cGTCACAACCAGCTTACTGGTGGTGTCTTTTTTgg < 1:15813060/35‑1 (MQ=255) cGTCACAACCAGCTTACTGGTGGTGTCTTTTTTgg < 1:11952630/35‑1 (MQ=255) gTCACAACCAGCTTACTGGTGGTGTCTTTTTTGGc < 1:14179959/35‑1 (MQ=255) cacaACCAGCTTACTGGTGGTGTCTTTTTTGGCTg < 1:9026637/35‑1 (MQ=255) cacaACCAGCTTACTGGTGGGGGCTTTTTTTGCTg > 1:8159205/1‑35 (MQ=25) acaACCAGCGTACTGGTGGTGTCTTTTTTGGCTGt < 1:17222384/35‑1 (MQ=255) caACCAGCTTACTGGTGGTGTCTTTTTTGGCTGtt < 1:12508190/35‑1 (MQ=255) caACCAGCTTACTGGTGGTGTCTTTTTTGGCTGtt < 1:15903346/35‑1 (MQ=255) caACCAGCTTACTGGTGGTGTCTTTTTTGGCTGtt < 1:14552235/35‑1 (MQ=255) aaCCAGCTTACTGGTGGTGTCTTTTTTGGCTGTTg < 1:10789447/35‑1 (MQ=255) aaCCAGCTTACTGGTGGGGGGTTTTTTTGCTgggg > 1:9210412/1‑32 (MQ=12) aCCAGCTTACTGGTGGTGTCTTTTTTGGCTGTTGc < 1:19155952/35‑1 (MQ=255) ccAGCTTACTGGTGGTGTCTTTTTTGGCTGTTGcc < 1:7038442/35‑1 (MQ=255) cAGCTTACTGGTGGTGTCTTTTTTGGCTGTTGCCg < 1:7348099/35‑1 (MQ=255) cAGCTTACTGGTGGTGTCTTTTTTGGCTGTTGCCg < 1:1124663/35‑1 (MQ=255) cAGCTTACTGGTGGTGTCTTTTTTGGCTGTTGCCg < 1:15338962/35‑1 (MQ=255) gCTTACTGGTTGTGTCTTTTTTGGCTGTTGCCGAc < 1:1898816/35‑1 (MQ=255) cTTACTGGTGGTGTCTTTTTTGGCTGTTGCCGAcc < 1:19307790/35‑1 (MQ=255) ttACTGGTGGTGTCTTTTTTGGCTGTTGCCGACCa < 1:13551226/35‑1 (MQ=255) ttACTAGTGGTGTCTTTTTTGGCTGTTGCCGACCa < 1:6338981/35‑1 (MQ=255) tACTGGTGGTGTCTTTTTTGGCTGTTGCCGACCAg < 1:1958935/35‑1 (MQ=255) tACTGGTGGTGTCTTTTTTGGCTGTTGCCGACCAg < 1:3322505/35‑1 (MQ=255) tACTGGTGGTGTCTTTTTTGGCTGTTGCCGACCAg < 1:16381262/35‑1 (MQ=255) cTGGTGGTGTCTTTTTTGGCTGTTGCCGACCAGGt < 1:14488385/35‑1 (MQ=255) cTGGTGGTGTCTTTTTTGGCTGTTGCCGACCAGGt < 1:17199487/35‑1 (MQ=255) cTGGTGGTGTCTTTTTTGGCTGTTGCCGACCAGGt < 1:12168236/35‑1 (MQ=255) tggtgggggtttttgaccggattgaggaaaagcgt < 1:13446065‑M1/35‑30 (MQ=255) tggtgggggtttttgaccggattgaggaaaagcgt < 1:4614025‑M1/35‑30 (MQ=255) tggtgggggtttttgaccggattgaggaaaagcgt < 1:7710718‑M1/35‑30 (MQ=255) tggtgggggtttttgaccggattgaggaaaagcgt > 1:9402868‑M1/1‑6 (MQ=255) tggtgggggtttttgaccggattgaggaaaagcgt > 1:8160195‑M1/1‑6 (MQ=255) tggtggTGTCTTTTTTGGCTGTTGCCGACCAGGTc < 1:2398310/35‑1 (MQ=255) ggtggtGTCTTTTTTGGCTGTTGCCGACCAGGTCg < 1:7040130/35‑1 (MQ=255) ggtgggggtttttgacctgattgaggaaaagcgtg > 1:14868717‑M1/1‑5 (MQ=255) ggtgggggtttttgaccggattgaggaaaagcgtg < 1:10863333‑M1/35‑31 (MQ=255) ggtgggggtttttgaccggattgaggaaaagcgtg < 1:500340‑M1/35‑31 (MQ=255) ggtgggggtttttgaccggattgaggaaaagcgtg > 1:7484719‑M1/1‑5 (MQ=255) gtggtgTCTTTTTTGGCTGTTGCCGACCAGGTCGc < 1:18589406/35‑1 (MQ=255) gtgggggtttttgaccggattgaggaaaagcgtga < 1:15654493‑M1/35‑32 (MQ=255) gtgggggtttttgaccggattgaggaaaagcgtga < 1:10423185‑M1/35‑32 (MQ=255) gtgggggtttttgaccggattgaggaaaagcgtga < 1:19851596‑M1/35‑32 (MQ=255) gtgggggtttttgaccggattgaggaaaagcgtga > 1:2827159‑M1/1‑4 (MQ=255) tggtgTCTTTTTTGGCTGTTGCCGACCAGGTCGCt < 1:4931548/35‑1 (MQ=255) tggtgTCTTTTTTGGCTGTTGCCGACCAGGTCGCt < 1:7882166/35‑1 (MQ=255) tggtgTCTTTTTTGGCTGTTGCCGACCAGGTCGCt < 1:7999041/35‑1 (MQ=255) tgggggtttttgaccggattgaggaaaagcgtgat < 1:16454337‑M1/35‑33 (MQ=255) tgggggtttttgaccggattgaggaaaagcgtgat < 1:8403665‑M1/35‑33 (MQ=255) ggtgTCTTTTTTGGCTGTTGCCGACCAGGTCGCTa < 1:1626664/35‑1 (MQ=255) ggtgTCTTTTTTGGCTGTTGCCGACCAGGTCGCTa < 1:19945546/35‑1 (MQ=255) ggtgTCTTTTTTGGCTGTTGCCGACCAGGTCGCTa < 1:16749450/35‑1 (MQ=255) gggggtttttgaccggattgaggaaaagcgtgatg < 1:543694‑M1/35‑34 (MQ=255) gggggtttttgaccggattgaggaaaagcgtgatg > 1:12141444‑M1/1‑2 (MQ=255) gggggtttttgaccggattgaggaaaagcgtgatg < 1:4546198‑M1/35‑34 (MQ=255) gggggtttttgaccggattgaggaaaagcgtgatg > 1:17116813‑M1/1‑2 (MQ=255) gggggtttttgaccggattgaggaaaagcgtgatg > 1:16758939‑M1/1‑2 (MQ=255) gtgtCTTTTTTGGCTGTTGCCGACCAGGTCGCTAc < 1:15975291/35‑1 (MQ=255) ggggtttttgaccggattgaggaaaagcgtgatgc > 1:2721627‑M1/1‑1 (MQ=255) ggggtttttgaccggattgaggaaaagcgtgatgc < 1:14413294‑M1/35‑35 (MQ=255) ggggtttttgaccggattgaggaaaagcgtgatgc > 1:19519135‑M1/1‑1 (MQ=255) ggggtttttgaccggattgaggaaaaccgtgatgc > 1:14910801‑M1/1‑1 (MQ=255) | CTACCGAGTGGCGTCACAACCAGCTTACTGGTGGTGTCTTTTTTGGCTGTTGCCGACCAGGTCGCTAC > REL606/280699‑280766 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |