New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 422590 = | 83 (0.810) | 4 (0.040) | 4/46 | NT | 6.1% | intergenic (‑277/+185) | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
? | REL606 | 801538 = | 45 (0.440) | coding (346/1290 nt) | bioA | adenosylmethionine‑8‑amino‑7‑oxononanoate transaminase |
TTTTCCCCCCCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/422604‑422590 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGCTACGGAACCGGAGTCCGCGAGAAAAACGCA > REL606/801538‑801571 | TTTTCCCCCCCTCCCCCCGCTACGGAACCGGAGTC < 1:6554989/35‑1 TTCCCCCCCTCCCCCCGCTACGGAACCGGAGTCCG < 1:9579743/35‑1 CCCCCTCCCCCCGCTACGGAACCGGAGTCCGCGAG < 1:18478999/35‑1 CCCCTCCCCCCGCTACGGAACCGGAGTCCGCGAGA < 1:4595455/35‑1 cccCCCCCCGCTACGGAACCGGAGTCCGCGAGAAA < 1:12677019/32‑1 ttCCCCCGCTACGGAACCGGAGTCCGCGAGAAAAA < 1:3609099/33‑1 ctCCCCGCTACGGAACCGGAGTCCGCGAGAAAAAC < 1:1149238/33‑1 ccaCCCGCTACGGAACCGGAGTCCGCGAGAAAAAC < 1:12872165/32‑1 CCCCCCGCTACGGAACCGGAGTCCGCGAGAAAAAC < 1:12184170/35‑1 CCCCCCGCTACGGAACCGGAGTCCGCGAGAAAAAC < 1:17464988/35‑1 CCCCCCGCTACGGAACCGGAGTCCGCGAGAAAAAC < 1:18608617/35‑1 CCCCCCGCTACGGAACCGGAGTCCGCGAGAAAAAC < 1:6911348/35‑1 CCCCGCTACGGAACCGGAGTCCGCGAGAAAAACGC < 1:6223005/35‑1 CCCGCTACGGAACCGGAGTCCGCGAGAAAAACGCA < 1:18668188/35‑1 | TTTTCCCCCCCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/422604‑422590 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGCTACGGAACCGGAGTCCGCGAGAAAAACGCA > REL606/801538‑801571 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |