New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1335926 | 52 (0.510) | 11 (0.170) | 5/30 | NT | 18.7% | coding (1724/2676 nt) | acnA | aconitate hydratase |
? | REL606 | = 2863313 | 63 (0.980) | coding (285/531 nt) | ygdP | dinucleoside polyphosphate hydrolase |
Only 100 of 154 total aligned reads displayed.
ATGAATATCAACCTGGCTTCTGAGCCTATCGGCCATGATCGCAAAGGCGATCCGGTTTATCTGAAAGAT > REL606/1335892‑1335960 | atGAATATCAACCTGGCTTCTGAGTCTATCGGCCA > 1:16902748‑M1/1‑35 (MQ=255) tGAATATCAACCTGGCTTCTGAGCCTATCGGCCAa > 1:8389083‑M1/1‑34 (MQ=255) tGAATATCAACCTGGCTTCTGAGCATATCGGCCAa > 1:17537086‑M1/1‑34 (MQ=255) gAATATCAACCTGGCTTCTGAGCCTCTCGGCCAaa > 1:1198564‑M1/1‑33 (MQ=255) gAATATCAACCTGGCTTCTGAGCCTATCGGCCAaa > 1:18948172‑M1/1‑33 (MQ=255) gAATATCAACCTGGCTTCTGAGCCTATCGGCCAaa > 1:3896342‑M1/1‑33 (MQ=255) gAATATCAACCTGGCTTCTGAGCCTATCGGCCATg < 1:16261852/35‑1 (MQ=255) gAATATCAACCTGGCTTCTGAGCCTATCGGCCATg < 1:17371640/35‑1 (MQ=255) aaTATCAACCTGGCTTCTGAGCCTATCGGCCAaaa > 1:6906230‑M1/1‑32 (MQ=255) aaTATCAACCTGGCTTCTGAGCCTATCGGCCAaaa > 1:8209961‑M1/1‑32 (MQ=255) aaTATCAACCTGGCTTCTGAGCCTATCGGCCATGa < 1:6580308/35‑1 (MQ=255) atatCAACCTGGCTTCTGAGCCTATCGGCCAaaaa > 1:18099676‑M1/1‑31 (MQ=255) tatCAACCTGGCTTCTGAGCCTATCGGCCAaaaaa > 1:14403607‑M1/1‑30 (MQ=255) tatCAACCTGGCTTCTGAGCCTATCGGCCATGATc < 1:8684960/35‑1 (MQ=255) atCAACCTGGCTTCTGAGCCTATCGGCCAaaaaag > 1:1832644‑M1/1‑29 (MQ=255) atCAACCTGGCTTCTGAGCCTATCGGCCAaaaaaa > 1:8978668‑M1/1‑29 (MQ=255) tCAACCTGGCTTCTGAGCCTATCGGCCAaaaaaaa > 1:4909589‑M1/1‑28 (MQ=255) tCAACCTGGCTTCTGAGCCTATCGGCCATGATCGc < 1:7818866/35‑1 (MQ=255) taaCCTGGCTTCTGAGCCTATCGGCCATGATCGCa < 1:19190970/34‑1 (MQ=255) cAACCTGGCTTCTGAGCCTATCGGCCAaaaaaaaa > 1:13455040‑M1/1‑27 (MQ=255) cAACCTGGCTTCTGAGCCTATCGGCCAaaaaaaaa > 1:2809660‑M1/1‑27 (MQ=255) cAACCTGGCTTCTGAGCCTATCGGCCATGATCGCa < 1:4150081/35‑1 (MQ=255) cAACCTGGCTTCTGAGCCTATCGGCCATGATCGCa < 1:6287393/35‑1 (MQ=255) aaCCTGGCTTCTGAGCCTATCGGCCAaaaaaaaaa > 1:13953727‑M1/1‑26 (MQ=255) aaCATGCCTTCTGAGCCTATCGGCCATGATCGCaa < 1:4773907/35‑1 (MQ=255) cccTGGTTTCTGAGCCTATCGGCCATGATCGCaaa < 1:7734794/34‑1 (MQ=255) aCCTGGCTTCTGAGCCTATCGGCCAaaaaaaaaaa > 1:20517051‑M1/1‑25 (MQ=255) aCCTGGCTTCTGAGCCTATCGGCCAaaaaaaaaaa > 1:10599462‑M1/1‑25 (MQ=255) aCCTGGCTTCTGAGCCTATCGGCCATGATCGCaaa < 1:14463032/35‑1 (MQ=255) aCCTGGCTTCTGAGCCTATCGGCCATGATCGCaaa < 1:4109361/35‑1 (MQ=255) ccTGGCTTCTGAGCCTATCGGCCAaaaaaaaaaaa > 1:942661‑M1/1‑24 (MQ=255) ccTGGCTTCTGAGCCTATCGGCCATGATCGCAAAg < 1:12508771/35‑1 (MQ=255) cgggCTTCTGAGCCTATCGGCCATGATCGCAAAgg < 1:2171274/33‑1 (MQ=255) cTGGCTTCTGAGCCTATCGGCCATGATCGCAAAgg < 1:12573002/35‑1 (MQ=255) tGGCTTCTGAGCCTATCGGCCATGATCGCAAAGGc < 1:12950541/35‑1 (MQ=255) tGGCTTCTGAGCCTATCGGCCATGATCGCAAAGGc < 1:6618413/35‑1 (MQ=255) ggCTTCTGAGCCTATCGGCCATGATCGCAAAGGCg < 1:15406537/35‑1 (MQ=255) cTTCTGAGCCTATCGGCCATGATCGCAAAGGCGAt < 1:14930063/35‑1 (MQ=255) ttCTGAGCCTATCGGCCATGATCGCAAAGGCGATc < 1:5494258/35‑1 (MQ=255) ttCTGAGCCTATCGGCCATGATCGCAAAGGCGATc < 1:14646188/35‑1 (MQ=255) tCTGAGCCTATCGGCCATGATCGCAAAGGCGATcc < 1:14501196/35‑1 (MQ=255) tGAGCCTATCGG‑CATGATCGCAAAGGCGAACCggg > 1:7541322/1‑34 (MQ=21) gAGCCTATCGGCCATGATCGCAAAGGCGATCCGGt < 1:14180073/35‑1 (MQ=255) agacTATCGGCCATGATCGCAAAGGCGATCCGGtt < 1:15881361/32‑1 (MQ=255) aGCCTATCGGCCATGATCGCAAAGGCGATCCGGtt < 1:1894310/35‑1 (MQ=255) aGCCTATCGGCCATGATCGCAAAGGCGATCCGGtt < 1:6519283/35‑1 (MQ=255) aGCCTATCGGCCATGATCGCAAAGGCGATCCGGtt < 1:3330821/35‑1 (MQ=255) gCCTATCGGCCATGATCGCAAAGGCGATCCGGttt < 1:3357556/35‑1 (MQ=255) gCCTATCGGCCATGATCGCAAAGGCGATCCGGttt < 1:6093107/35‑1 (MQ=255) cTATCGGCCATGATCGCAAAGGCGATCCGGTTTAt < 1:20413503/35‑1 (MQ=255) cTATCGGCCATGATCGCAAAGGCGATCCGGTTTAt < 1:15274969/35‑1 (MQ=255) tATCGGCCAaaaacaaaaatggtttctcttgcagc < 1:13027946‑M1/35‑27 (MQ=255) aTCGGCCAaaaacaaaaatggtttctcttgcagct < 1:17094407‑M1/35‑28 (MQ=255) aTCGGCCAaaaacaaaaatggtttctcttgcagct > 1:307728‑M1/1‑8 (MQ=255) aTCGGCCAaaaacaaaaatggtttctcttgcagct > 1:2171654‑M1/1‑8 (MQ=255) aTCGGCCAaaaacaaaaatggtttctcttgcagct < 1:186488‑M1/35‑28 (MQ=255) tCGGCCAaaaacaaaaatggtttctcttgcagctg < 1:1936127‑M1/35‑29 (MQ=255) tCGGCCATGATCGCAAAGGCGATCCGGTTTATCTg < 1:2526357/35‑1 (MQ=255) tCGGCCATGATCGCAAAGGCGATCCGGTTTATCTg < 1:15025545/35‑1 (MQ=255) tCGGCCATGATCGCAAAGGCGATCCGGTTTATCTg < 1:369614/35‑1 (MQ=255) tCGGCCATGATCGCAAAGGCGATCCGGTTTATCTg < 1:16684442/35‑1 (MQ=255) cGGCCAaaaacaaaaatggtttctcttgcagctgg < 1:11869030‑M1/35‑30 (MQ=255) cGGCCAaaaacaaaaatggtttctcttgcagctgg < 1:15316995‑M1/35‑30 (MQ=255) cGGCCAaaaacaaaaatggtttctcttgcagctgg > 1:20333113‑M1/1‑6 (MQ=255) cGGCCAaaaacaaaaatggtttctcttgcagctgg > 1:2518026‑M1/1‑6 (MQ=255) cGGCCAaaaacaaaaatggtttctcttgcagctgg > 1:5993279‑M1/1‑6 (MQ=255) cGGCCAaaaacaaaaatggtttctcttgcagctgg < 1:14418622‑M1/35‑30 (MQ=255) cGGCCAaaaacaaaaatggtttctcttgcagctgg < 1:17788534‑M1/35‑30 (MQ=255) cGGCCAaaaacaaaaatggtttctcttgcagctgg < 1:428840‑M1/35‑30 (MQ=255) ggCCAaaaacaaaaatggtttctcttgcagctggt > 1:12080486‑M1/1‑5 (MQ=255) ggCCAaaaacaaaaatggtttctcttgcagctggt < 1:5813674‑M1/35‑31 (MQ=255) ggCCAaaaacaaaaatggtttctcttgcagctggt < 1:2001008‑M1/35‑31 (MQ=255) ggCCAaaaacaaaaatggtttctcttgcagctggt > 1:19834585‑M1/1‑5 (MQ=255) ggCCATGATCGCAAAGGCGATCCGGTTTTTTTGaa > 1:3785879/1‑35 (MQ=37) ggCCATGATCGCAAAGGCGATCCGGTTTATCTGaa < 1:1873769/35‑1 (MQ=255) ggCCATGATCGCAAAGGCGATCCGGTTTATCTGaa > 1:5775653/1‑35 (MQ=255) gCCAaaaacaaaaatggtttctcttgcagctggtg < 1:2638767‑M1/35‑32 (MQ=255) gCCATGATCGCAAAGGCGATCCGGTTTATCTGaaa < 1:13126847/35‑1 (MQ=255) gCCATGATCGCAAAGGCGATCCGGTTTATCTGaaa < 1:20431212/35‑1 (MQ=255) gCCATGATCGCAAAGGCGATCCGGTTTATCTGaaa < 1:17983387/35‑1 (MQ=255) ccAaaaacaaaaatggtttctcttgcagctggtga > 1:5405484‑M1/1‑3 (MQ=255) ccAaaaacaaaaatggtttctcttgcagctggtga < 1:10022406‑M1/35‑33 (MQ=255) ccAaaaacaaaaatggtttctcttgcagctggtga > 1:18376650‑M1/1‑3 (MQ=255) ccAaaaacaaaaatggtttctcttgcagctggtga < 1:161321‑M1/35‑33 (MQ=255) ccATGATCGCAAAGGCGATCCGGTTTATCTGAAAg < 1:5195244/35‑1 (MQ=255) ccATGATCGCAAAGGCGATCCGGTTTATCTGAAAg < 1:3716604/35‑1 (MQ=255) ccATGATCGCAAAGGCGATCCGGTTTATCTGAAAg > 1:6790153/1‑35 (MQ=255) ccATGATCGCAAAGGCGATCCGGTTTATCTGAAAg > 1:12098011/1‑35 (MQ=255) caaaaacaaaaatggtttctcttgcagctggtgag < 1:13219610‑M1/35‑34 (MQ=255) cATGATCGCAAAGGCGATCCGGTTTATCTGAAAGa > 1:9470744/1‑35 (MQ=255) cATGATCGCAAAGGCGATCCGGTTTATCTGAAAGa < 1:7644518/35‑1 (MQ=255) cATGATCGCAAAGGCGATCCGGTTTATCTGAAAGa > 1:17553176/1‑35 (MQ=255) cATGATCGCAAAGGCGATCCGGTTTATCTGAAAGa > 1:20087801/1‑35 (MQ=255) aaaaacaaaaatggtttctcttgcagctggtgagc < 1:15782286‑M1/35‑35 (MQ=255) aaaaacaaaaatggtttctcttgcagctggtgagc > 1:11482660‑M1/1‑1 (MQ=255) aaaaacaaaaatggtttctcttgcagctggtgagc < 1:10291850‑M1/35‑35 (MQ=255) aaaaacaaaaatggtttctcttgcagctggtgagc < 1:4441756‑M1/35‑35 (MQ=255) aTGATCGCAAAGGCGATCCGGTTTATCTGAAAGat > 1:16336545/1‑35 (MQ=255) aTGATCGCAAAGGCGATCCGGTTTATCTGAAAGat > 1:7230637/1‑35 (MQ=255) aTGATCGCAAAGGCGATCCGGTTTATCTGAAAGat > 1:989461/1‑35 (MQ=255) | ATGAATATCAACCTGGCTTCTGAGCCTATCGGCCATGATCGCAAAGGCGATCCGGTTTATCTGAAAGAT > REL606/1335892‑1335960 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |