New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 246042 | 115 (1.120) | 8 (0.080) | 5/44 | NT | 10.0% | coding (1833/2445 nt) | fadE | acyl‑CoA dehydrogenase |
? | REL606 | 503801 = | 39 (0.410) | coding (587/927 nt) | ybbS | DNA‑binding transcriptional activator of the allD operon |
Only 100 of 209 total aligned reads displayed.
CAGAGGCGAGGTAGAGCTGGCTTAAAATATCCCCCAGACGGGCCGAGATGCGCTCGCGACGTTTCAGGC > REL606/246008‑246076 | cAGAGGCGAGGTAGAGCTGGCTTAAAATATCCCCC < 1:18621455‑M1/35‑1 (MQ=255) cAGAGGCGAGGTAGAGCTGGCTTAAAATATCCCCC < 1:7596714‑M1/35‑1 (MQ=255) agagGCGAGGTAGAGCTGGCTTAAAATATCCCCCa < 1:18784767/35‑1 (MQ=255) agagGCGAGGTAGAGCTGGCTTAAAATATCCCCCa < 1:13216547/35‑1 (MQ=255) gatgCGAGGTAGAGCTGGCTTAAAATATCCCCCAg > 1:5742664/4‑35 (MQ=255) gagGCGAGGTAGAGCTGGCTTAAAATATCCCCCcg > 1:20565719‑M1/1‑33 (MQ=255) gagGCGAGGTAGAGCTGGCTTAAAATATCCCCCAg > 1:13143158/1‑35 (MQ=255) gagGCGAGGTAGAGCTGGCTTAAAATATCCCCCAg < 1:18384365/35‑1 (MQ=255) gagGCGAGGTAGAGCTGGCTTAAAATATCCCCCAg < 1:7883266/35‑1 (MQ=255) gagGCGAGGTAGAGCTGGCTTAAAATATCCCCCAg > 1:10016503/1‑35 (MQ=255) agGCGAGGTAGAGCTGGCTTAAAATATCCCCCAGa < 1:18323131/35‑1 (MQ=255) agGCGAGGTAGAGCTGGCTTAAAATATCCCCCAGa < 1:3290426/35‑1 (MQ=255) agGCGAGGTAGAGCTGGCTTAAAATATCCCCCAGa < 1:12463010/35‑1 (MQ=255) ggCGAGGTAGAGCTTGCTTAAAATATCCCCCAGAc > 1:5506216/1‑35 (MQ=255) ggCGAGGTAGAGCTGGCTTAAAATATCCCCCAGAc < 1:4596411/35‑1 (MQ=255) cGAGGTAGAGCTGGCTTAAAATATCCCCCAGACgg > 1:8494746/1‑35 (MQ=255) cGAGGTAGAGCTGGCTTAAAATATCCCCCAGACgg < 1:20351843/35‑1 (MQ=255) gAGGTAGAGCTGGCTTAAAATATCCCCCAGACggg > 1:422285/1‑35 (MQ=255) aGGTAGAGCTGGCTTAAAATATCCCCCAGACGGGc > 1:15965563/1‑35 (MQ=255) aGGTAGAGCTGGCTTAAAATATCCCCCAGACGGGc > 1:14068574/1‑35 (MQ=255) aGGTAGAGCTGGCTTAAAATATCCCCCAGACGGGc > 1:14445679/1‑35 (MQ=255) aGGTAGAGCTGGCTTAAAATATCCCCCAGACGGGc < 1:3547571/35‑1 (MQ=255) aGGTAGAGCTGGCTTAAAATATCCCCCAGACGGGc > 1:7092680/1‑35 (MQ=255) ggTAGAGCTGGCTTAAAATATCCCCCAGACGGGcc < 1:19537941/35‑1 (MQ=255) gTAGAGCTGGCTTAAAATATCCCCCAGACGGGCCg < 1:11785396/35‑1 (MQ=255) gTAGAGCTGGCTTAAAATATCCCCCAGACGGGCCg < 1:5215630/35‑1 (MQ=255) gTAGAGCTGGCTTAAAATATCCCCCAGACGGGCCg > 1:10295817/1‑35 (MQ=255) tAGAGCTGGCTTAAAATATCCCCCAGACGGGCCga > 1:3216683/1‑35 (MQ=255) tAGAGCTGGCTTAAAATATCCCCCAGACGGGCCga > 1:17680971/1‑35 (MQ=255) agagCTGGCTTAAAATATCCCCAAGACGGGCCgag < 1:19647052/35‑1 (MQ=255) agCTGGCTTAAAATATCCCCCAGACGGGCCGAGAt > 1:6061965/1‑35 (MQ=255) agCTGGCTTAAAATATCCCCCAGACGGGCCGAGAt > 1:9770301/1‑35 (MQ=255) agCTGGCTTAAAATATCCCCCAGACGGGCCGAGAt > 1:14202099/1‑35 (MQ=255) agCTGGCTTAAAATATCCCCCAGACGGGCCGAGAt < 1:13861730/35‑1 (MQ=255) gCTGGCTTAAAATATCCCCCAGACGGGCCGAGATg > 1:12850864/1‑35 (MQ=255) gCTGGCTTAAAATATCCCCCAGACGGGCCGAGATg > 1:11148659/1‑35 (MQ=255) cTGGCTTAAAATATCCCCCAGACGGGCCGAGATgc > 1:1349343/1‑35 (MQ=255) cTGGCTTAAAATATCCCCCAGACGGGCCGAGATgc > 1:16590647/1‑35 (MQ=255) cTGGCTTAAAATATCCCCCAGACGGGCCGAGATgc < 1:5143589/35‑1 (MQ=255) cTGGCTTAAAATATCCCCCAGACGGGCCGAGATgc > 1:7695836/1‑35 (MQ=255) tGGCTTAAAATATCCCCCAGACGGGCCGAGATgcg > 1:11574393/1‑35 (MQ=255) tGGCTTAAAATATCCCCCAGACGGGCCGAGATgcg > 1:12064879/1‑35 (MQ=255) ggCTTAAAATATCCCCCAGACGGGCCGAGATgcgc > 1:1531664/1‑35 (MQ=255) ggCTTAAAATATCCCCCAGACGGGCCGAGATgcgc > 1:15425989/1‑35 (MQ=255) ggCTTAAAATATCCCCCAGACGGGCCGAGATgcgc > 1:17217215/1‑35 (MQ=255) ggCTTAAAATATCCCCCAGACGGGCCGAGATgcgc > 1:18565320/1‑35 (MQ=255) cTTAAAATATCCCCCAGACGGGCCGAGATGCGCTc < 1:6277284/35‑1 (MQ=255) cTTAAAATATCCCCCAGACGGGCCGAGATGCGCTc < 1:10726410/35‑1 (MQ=255) cTTAAAATATCCCCCAGACGGGCCGAGATGCGCTc < 1:10408152/35‑1 (MQ=255) cTTAAAATATCCCCCAGACGGGCCGAGATGCGCTc < 1:14290297/35‑1 (MQ=255) ttAAAATATCCCCCAGACGGGCCTAGATGCGCTcg > 1:8093566/1‑35 (MQ=255) ttAAAATATCCCCCAGACGGGCCGAGATGCGCTcg > 1:10084630/1‑35 (MQ=255) ttAAAATATCCCCCAGACGGGCCGAGATGCGCTcg < 1:13397700/35‑1 (MQ=255) ttAAAATATCCCCCAGACGGGCCGAGATGCGCTcg < 1:14043372/35‑1 (MQ=255) tAAAATATCCCCCAGACGGGCCGAGATGCGCTcgc > 1:10458392/1‑35 (MQ=255) tAAAATATCCCCCAGACGGGCCGAGATGCGCTcgc > 1:1241671/1‑35 (MQ=255) aaaaTATCCCCCAGACGGGCCGAGATGCGCTcgcg > 1:16349467/1‑35 (MQ=255) aaaaTATCCCCCAGACGGGCCGAGATGCGCTcgcg > 1:113990/1‑35 (MQ=255) aaaaTATCCCCCAGACGGGCCGAGATGCGCTcgcg < 1:11913612/35‑1 (MQ=255) aaaaTATCCCCCAGACGGGCCGAGATGCGCTcgcg < 1:5870300/35‑1 (MQ=255) aaaaTATCCCCCAGACGGGCCGAGATGCGCTcgcg > 1:5433784/1‑35 (MQ=255) aaTATCCCCCAGACGGGCCGAGATGCGCTCGCGAc > 1:14774996/1‑35 (MQ=255) aaTATCCCCCAGACGGGCCGAGATGCGCTCGCGAc > 1:7524448/1‑35 (MQ=255) aaTATCCCCCAGACGGGCCGAGATGCGCTCGCGAc < 1:19713307/35‑1 (MQ=255) atatCCCCCAGACGGGCCGAGATGCGCTCGCGACg > 1:7022055/1‑35 (MQ=255) tatCCCCCgccggaaagcgccgcaactgcgcttct < 1:5570266‑M1/35‑28 (MQ=255) tatCCCCCgccggaaagcgccgcaactgcgcttct < 1:20147804‑M1/35‑28 (MQ=255) tatCCCCCAGACGGGCCGAGATGCGCTCGCGACGt > 1:451063/1‑35 (MQ=255) attccCCCgccggaaagcgccgcaactgcgcttct < 1:9077650‑M1/33‑28 (MQ=255) atCCCCCgccggaaagcgccgcaactgcgcttctg < 1:9326961‑M1/35‑29 (MQ=255) atCCCCCAGACGGGCCGAGATGCGCTCGCGACGtt > 1:8873867/1‑35 (MQ=255) tgacccgccggaaagcgccgcaactgcgcttctgt < 1:12622066‑M1/32‑30 (MQ=255) tCCCCCgccggaaagcgccgcaactgcgcttctgt < 1:14956776‑M1/35‑30 (MQ=255) tCCCCCAGACGGGCCGAGATGCGCTCGCGACGttt < 1:12226062/35‑1 (MQ=255) tCCCCCAGACGGGCCGAGATGCGCTCGCGACGttt < 1:15505050/35‑1 (MQ=255) gcccccgccggaaagcgccgcaactgcgcttctgt < 1:19944543‑M1/34‑30 (MQ=255) tccccgccggaaagcgccgcaactgcgcttctgtt < 1:13312923‑M1/34‑31 (MQ=255) cccccgccggaaagcgccgcaactgcgcttctgtt < 1:1106775‑M1/35‑31 (MQ=255) gcccgccggaaagcgcagcaactgcgcttctgtta < 1:14516009‑M1/34‑32 (MQ=255) ccccgccggaaagcgccgcaactgcgcttctgtta < 1:14662960‑M1/35‑32 (MQ=255) ccccgccggaaagcgccgcaactgcgcttctgtta < 1:8623188‑M1/35‑32 (MQ=255) ccccAGACGGGCCGAGATGCGCTCGCGACGTTTCa < 1:17334198/35‑1 (MQ=255) ccccAGACGGGCCGAGATGCGCTCGCGACGTTTCa < 1:3170153/35‑1 (MQ=255) ccccAGACGGGCCGAGATGCGCTCGCGACGTTTCa < 1:19745755/35‑1 (MQ=255) ccccAGACGGGCCGAGATGCGCTCGCGACGTTTCa > 1:1926753/1‑35 (MQ=255) ccccAGACGGGCCGAGATGCGCTCGCGACGTTTCa > 1:19121650/1‑35 (MQ=255) cccgccggaaagcgccgcaactgcgcttctgttag < 1:19334845‑M1/35‑33 (MQ=255) cccAGACGGGCCGAGATGCGCTCGCGACGTTTCAg < 1:14984327/35‑1 (MQ=255) cccAGACGGGCCGAGATGCGCTCGCGACGTTTCAg > 1:6791102/1‑35 (MQ=255) cccAGACGGGCCGAGATGCGCTCGCGACGTTTCAg < 1:4858154/35‑1 (MQ=255) cccAGACGGGCCGAGATGCGCTCGCGACGTTTCAg < 1:17911992/35‑1 (MQ=255) cccAGACGGGCCGAGATGCGCTCGCGACGTTTCAg < 1:18345761/35‑1 (MQ=255) ccgccggaaagcgccgcaactgcgcttctgttagc > 1:11645763‑M1/1‑2 (MQ=255) cgccggaaagcgccgcaactgcgcttctgttagcg < 1:12753859‑M1/35‑35 (MQ=255) cAGGCGGGCCGAGATGCGCTCGCGACGTTTCAGGc < 1:15252865/35‑1 (MQ=255) cAGACGGGCCGAGATGCGCTCGCGACGTTTCAGGc < 1:10529818/35‑1 (MQ=255) cAGACGGGCCGAGATGCGCTCGCGACGTTTCAGGc < 1:11311353/35‑1 (MQ=255) cAGACGGGCCGAGATGCGCTCGCGACGTTTCAGGc < 1:11723055/35‑1 (MQ=255) cAGACGGGCCGAGATGCGCTCGCGACGTTTCAGGc < 1:17549389/35‑1 (MQ=255) cAGACGGGCCGAGATGCGCTCGCGACGTTTCAGGc < 1:18231205/35‑1 (MQ=255) | CAGAGGCGAGGTAGAGCTGGCTTAAAATATCCCCCAGACGGGCCGAGATGCGCTCGCGACGTTTCAGGC > REL606/246008‑246076 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |