New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1076256 | 103 (1.000) | 12 (0.160) | 3/36 | NT | 15.1% | coding (711/2547 nt) | torA | trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit |
? | REL606 | 3800450 = | 58 (0.750) | intergenic (+10/+31) | ECB_03545/yicM | hypothetical protein/predicted transporter |
CATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1076217‑1076256 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaaCAACTACTGACCAACGCTTCTTTACCTGATATCA > REL606/3800450‑3800483 CATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACC < 1:568114/35‑1 CATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACC > 1:19646362/1‑35 CATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACC < 1:17706637/35‑1 CATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACC < 1:6442562/35‑1 CATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACC < 1:17549822/35‑1 ATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCA < 1:1088222/35‑1 ATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCA > 1:1412747/1‑35 ATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCA > 1:9257888/1‑35 ATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCA < 1:16990276/35‑1 ATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCA < 1:2766282/35‑1 ATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCA < 1:7388927/35‑1 ATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCA > 1:13436729/1‑35 TTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCAG > 1:17703468/1‑35 TTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCAG < 1:591571/35‑1 TTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCAG < 1:11545534/35‑1 TTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCAG < 1:9673189/35‑1 TGTGCTGTGGGGCTCCGATTTGCTGAAAAACCAGC < 1:3597847/35‑1 TGTGCTGTGGGGCTCCGATTTGCTGAAAAACCAGC > 1:15021866/1‑35 GTGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCA < 1:18780431/35‑1 GTGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCA < 1:18785736/35‑1 GTGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCA > 1:15104189/1‑35 GTGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCA < 1:14993049/35‑1 gGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA > 1:14474466/2‑35 atCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA < 1:11246882/33‑1 TGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA > 1:9607246/1‑35 TGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA < 1:20007839/35‑1 TGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA > 1:16329841/1‑35 TGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA > 1:2789748/1‑35 TGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA > 1:5942342/1‑35 TGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA > 1:15421570/1‑35 TGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA > 1:14898124/1‑35 ataTGAAAAACCAGCAACAACTACTGACCAACGCT < 1:8033077/32‑1 ataTGAAAAACCAGCAACAACTACTGACCAACGCT < 1:10950425/32‑1 aTGAAAAACCAGCAACAACTACTGACCAACGCTTC < 1:3602751/34‑1 tggAAAACCAGCAACAACTACTGACCAACGCTTCT < 1:16499135/32‑1 TGAAAAACCAGCAACAACTACTGACCAACGCTTCT < 1:7512496/35‑1 TGAAAAACCAGCAACAACTACTGACCAACGCTTCT < 1:14626997/35‑1 gtAAAACCAGCAACAACTACTGACCAACGCTTCTT < 1:1399202/33‑1 aAAAAACCAGCAACAACTACTGACCAACGCTTCTT < 1:18748438/34‑1 aAAAAACCAGCAACAACTACTGACCAACGCTTCTT < 1:15199926/34‑1 aAAAAACCAGCAACAACTACTGACCAACGCTTATT < 1:18239126/34‑1 GAAAAACCAGCAACAACTACTGACCAACGCTTCTT < 1:3723104/35‑1 AAAGACCAGCAACAACTACTGACCAACGCTTCTTT < 1:190103/35‑1 AAAAACCAGCAACAACTACTGACCAACGCTTCTTT < 1:15316934/35‑1 AAAAACCAGCAACAACTACTGACCAACGCTTCTTT < 1:17586635/35‑1 AACCAGCAACAACTACTGACCAACGCTTCTTTACC < 1:714720/35‑1 ACCAGCAACAACTACTGACCAAGGCTTCTTTACCT < 1:1716449/35‑1 ACCAGCAACAACTACTGACCAACGCTTCTTTACCT < 1:2118805/35‑1 ACCAGCAACAACTACTGACCAACGCTTCTTTACCT < 1:16958685/35‑1 ACCAGCAACAACTACTGACCAACGCTTCTTTACCT < 1:10319329/35‑1 ACCAGCAACAACTACTGACCAACGCTTCTTTACCT < 1:13382962/35‑1 CCAGCAACAACTACTGACCAACGCTTCTTTACCTG < 1:18230663/35‑1 CAGCAACAACTCCTGACCAACGCTTCTTTACCTGA < 1:7106111/35‑1 CAGCAACAACTACTGACCAACGCTTCTTTACCTGA > 1:18408580/1‑35 CAGCAACAACTACTGACCAACGCTTCTTTACCTGA < 1:17499727/35‑1 CAGCAACAACTACTGACCAACGCTTCTTTACCTGA < 1:16860031/35‑1 CAGCAACAACTACTGACCAACGCTTCTTTACCTGA < 1:12195869/35‑1 CAGCAACAACTACTGACCAACGCTTCTTTACCTGA < 1:14228615/35‑1 AGCAACAACTACTGACCAACGCTTCTTTACCTGAT < 1:7309926/35‑1 AGCAACAACTACTGACCAACGCTTCTTTACCTGAT > 1:5753372/1‑35 AGCAACAACTACTGACCAACGCTTCTTTACCTGAT < 1:905894/35‑1 AGCAACAACTACTGACCAACGCTTCTTTACCTGAT < 1:2894791/35‑1 AGCAACAACTACTGACCAACGCTTCTTTACCTGAT > 1:16243360/1‑35 AGCAACAACTACTGACCAACGCTTCTTTACCTGAT < 1:16317319/35‑1 AGCAACAACTACTGACCAACGCTTCTTTACCTGAT > 1:16473844/1‑35 AGCAACAACTACTGACCAACGCTTCTTTACCTGAT > 1:16477803/1‑35 GCAACAACTACTGACCAACGCTTCTTTACCTGATA < 1:16195610/35‑1 GCAACAACTACTGACCAACGCTTCTTTACCTGATA < 1:15642336/35‑1 GCAACAACTACTGACCAACGCTTCTTTACCTGATA < 1:857053/35‑1 GCAACAACTACTGACCAACGCTTCTTTACCTGATA < 1:8255898/35‑1 GCAACAACTACTGACCAACGCTTCTTTACCTGATA > 1:12604818/1‑35 GCAACAACTACTGACCAACGCTTCTTTACCTGATA > 1:12249143/1‑35 CAACAACTACTGACCAACGCTTCTTTACCTGATAT > 1:16144885/1‑35 CAACAACTACTGACCAACGCTTCTTTACCTGATAT < 1:16461437/35‑1 CAACAACTACTGACCAACGCTTCTTTACCTGATAT > 1:16736750/1‑35 AACAACTACTGACCAACGCTTCTTTACCTGATATC < 1:8964677/35‑1 AACAACTACTGACCAACGCTTCTTTACCTGATATC > 1:11900624/1‑35 AACAACTACTGACCAACGCTTCTTTACCTGATATC < 1:9827592/35‑1 AACAACTACTGACCAACGCTTCTTTACCTGATATC < 1:12232466/35‑1 AACAACTACTGACCAACGCTTCTTTACCTGATATC < 1:1399582/35‑1 AACAACTACTGACCAACGCTTCTTTACCTGATATC > 1:5314974/1‑35 AACAACTACTGACCAACGCTTCTTTACCTGATATC > 1:3701924/1‑35 AACAACTACTGACCAACGCTTCTTTACCTGATATC < 1:20058486/35‑1 AACAACTACTGACCAACGCTTCTTTACCTGATATC < 1:19166230/35‑1 AACAACTACTGACCAACGCTTCTTTACCTGATATC > 1:1845978/1‑35 AACAACTAATGACCAACGCTTCTTTACCTGATATC < 1:11770661/35‑1 ACAACTACTGACCAACGCTTCTTTACCTGATATCA < 1:12954804/35‑1 ACAACTACTGACCAACGCTTCTTTACCTGATATCA < 1:3163043/35‑1 ACAACTACTGACCAACGCTTCTTTACCTGATATCA < 1:9743474/35‑1 CATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1076217‑1076256 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaaCAACTACTGACCAACGCTTCTTTACCTGATATCA > REL606/3800450‑3800483 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |