New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 50078 | 64 (0.620) | 8 (0.100) | 3/38 | NT | 17.8% | coding (77/1332 nt) | yaaU | predicted transporter |
? | REL606 | 558256 = | 23 (0.280) | coding (193/294 nt) | ECB_00516 | conserved hypothetical protein |
CGGGCATGGCAAGCGAATGAATATGCCGTGGTGGGGCGGTTTTGATACACGTGCATGGGATGTGGCAAG > REL606/558222‑558290 | ttcaccgccgcattttgctgtggggaagcggtggg > 1:4075849‑M2/35‑35 (MQ=255) ttcaccgccgcattttgctgtggggaagcggtggg > 1:12450493‑M2/35‑35 (MQ=255) tggtgccgccctggccggtgaggttCGTGGTgggg < 1:11020646‑M1/10‑1 (MQ=255) tcaccgccgcattttgctgtggggaagcggtgggc > 1:2842859‑M2/34‑34 (MQ=255) tcaccgccgcattttgctgtggggaagcggtgggc > 1:19594496‑M2/34‑34 (MQ=255) caccgccgcattttgctgtggggaagcggtggGGc > 1:15266721‑M2/33‑35 (MQ=255) caccgccgcattttgctgtggggaagcggtggGGc > 1:20483604‑M2/33‑35 (MQ=255) gtgccgccctggccggtgaggttCGTggtgggcgg < 1:2694370‑M1/12‑4 (MQ=255) accgccgcattttgctgtggggaagcggtggGCCg > 1:4781141‑M2/32‑35 (MQ=255) accgccgcattttgctgtggggaagcggtggGCCg > 1:8780214‑M2/32‑35 (MQ=255) tgccgccctggccggtgaggttCGTggtggggagt < 1:5399816‑M1/13‑4 (MQ=255) ccgccgcattttgctgtggggaagcggtggggccg > 1:1797176‑M2/31‑33 (MQ=255) ccgccgcattttgctgtggggaagcggtggGCCgg > 1:11043474‑M2/31‑35 (MQ=255) gccgccctggccggtgaggttCGTGGTGGGGGGGt < 1:3966123‑M1/14‑1 (MQ=255) gccgcattttgctgtggggaagcggtggGGGGGtt > 1:6452171‑M2/29‑35 (MQ=255) ccgccctggccggtgaggttCGTGGTGGggcgttt < 1:12257482‑M1/15‑4 (MQ=255) ccgccctggccggtgaggttCGTGGTGGGGAGGtt < 1:4845574‑M1/15‑1 (MQ=255) ccgcattttgctgtggggaagcggtggGGCGTttt > 1:14093888‑M2/28‑35 (MQ=255) ccgcattttgctgtggggaagcggtggGGCGGttt > 1:5297900‑M2/28‑35 (MQ=255) ccgcattttgctgtggggaagcggtggGGCGGttt > 1:15668275‑M2/28‑35 (MQ=255) gccctggccggtgaggttCGTGGTGGGGCGTtttt < 1:1951617‑M1/17‑1 (MQ=255) gcattttgctgtggggaagcggtggGGCGGTTTTg > 1:2032565‑M2/26‑35 (MQ=255) gcattttgctgtggggaagcggtggGGCGCTTTTg > 1:7678452‑M2/26‑35 (MQ=255) ccctggccggtgaggttCGTGGTGGGGCGTTTTTg < 1:15085725‑M1/18‑1 (MQ=255) ccctggccggtgaggttCGTGGTGGGGAGGTTTTg < 1:6061973‑M1/18‑1 (MQ=255) cctggccggtgaggttCGTGGTGGGGCggtttttg < 1:6977799‑M1/19‑3 (MQ=255) cattttgctgtggggaagcggtggGGCGGTTTtgg > 1:5376979‑M2/25‑34 (MQ=255) ttttgctgtggggaagcggtggGGCGGTtttgggt > 1:3011662‑M2/23‑32 (MQ=255) cGAATGAATATGCCGTGGTGGGGCGGTTTTGATac < 1:19806322/35‑1 (MQ=35) gaatgaatATGCCGTGGTGGGGCGGTTTTGATaca < 1:16355892/35‑1 (MQ=38) gaatgaatATGCCGTGGTGGGGCGGTTTTGATaca < 1:18997986/35‑1 (MQ=38) gaatgaatATGCCGTGGTGGGGCGGTTTTGATaca < 1:840076/35‑1 (MQ=38) gaatgaatATGCCGTGGTGGGGCGGTTTTGATaca < 1:11268331/35‑1 (MQ=38) gaatgaatATGCCGTGGTGGGGCGGTTTTGATaca < 1:9076029/35‑1 (MQ=38) aatgaatATGCCGTGGTGGGGCGGTTTTGATacac < 1:6161216/35‑1 (MQ=40) aatgaatATGCCGTGGTGGGGCGGTTTTGATacac < 1:1300961/35‑1 (MQ=40) aatgaatATGCCGTGGTGGGGCGGTTTTGATacac < 1:13634211/35‑1 (MQ=40) atgaatATGCCGTGGTGGGGCGGTTTTGATACACg < 1:7118960/35‑1 (MQ=255) atgaatATGCCGTGGTGGGGCGGTTTTGATACACg < 1:19767257/35‑1 (MQ=255) atgaatATGCCGTGGTGGGGCGGTTTTGATACACg < 1:9152682/35‑1 (MQ=255) tgaatATGCCGTGGTGGGGCGGTTTTGATACACGt < 1:14205898/35‑1 (MQ=255) tgaatATGCCGTGGTGGGGCGGTTTTGATACACGt < 1:7773621/35‑1 (MQ=255) gaatATGCCGTGGTGGGGCGGTTTTGATACACGTg < 1:9377352/35‑1 (MQ=255) aatATGCCGTGGTGGGGCGGTTTTGATACACGTGc < 1:16219545/35‑1 (MQ=255) aatATGCCGTGGTGGGGCGGTTTTGATACACGTGc < 1:7355718/35‑1 (MQ=255) atatGCCGTGGTGGGGCGGTTTTGATACACGTGCa < 1:8107820/35‑1 (MQ=255) atGCCGTGGTGGGGCGGTTTTGATACACGTGCATg < 1:12856018/35‑1 (MQ=255) atGCCGTGGTGGGGCGGTTTTGATACACGTGCATg < 1:8360912/35‑1 (MQ=255) atGCCGTGGTGGGGCGGTTTTGATACACGTGCATg < 1:10369568/35‑1 (MQ=255) tGCCGTGGTGGGGCGGTTTTGATACACGTGCATgg < 1:2720/35‑1 (MQ=255) tGCCGTGGTGGGGCGGTTTTGATACACGTGCATgg < 1:13077462/35‑1 (MQ=255) gcaGTGGTGGGGCGGTTTTGATACACGTGCATggg > 1:11956163‑M1/4‑35 (MQ=255) gCCGTGGTGGGGCGGTTTTGATACACGTGCATggg < 1:3899669/35‑1 (MQ=255) gCCGTGGTGGGGCGGTTTTGATACACGTGCATggg < 1:5157426/35‑1 (MQ=255) gCCGTGGTGGGGCGGTTTTGATACACGTGCATggg < 1:20427903/35‑1 (MQ=255) gCCGTGGTGGGGCGGTTTTGATACACGTGCATggg < 1:5786835/35‑1 (MQ=255) ccGTGGTGGGGCGGTTTTGATACACGTGCATGGGa < 1:18028030/35‑1 (MQ=255) ccGTGGTGGGGCGGTTTTGATACACGTGCATGGGa < 1:12862584/35‑1 (MQ=255) GTGGTGGGGCGGTTTTGATACACGTGCATGGGAtg > 1:11872392‑M1/1‑35 (MQ=255) TGGTGGGGCGGTTTTGATACACGTGCATGGGAtgt > 1:11251802‑M1/1‑35 (MQ=255) TGGTGGGGCGGTTTTGATACACGTGCATGGGAtgt > 1:6576126‑M1/1‑35 (MQ=255) TGGTGGGGCGGTTTTGATACACGTGCATGGGAtgt > 1:14674951‑M1/1‑35 (MQ=255) TGGTGGCGCGGTTTTGATACACGTGCATGGGAtgt > 1:18501749‑M1/1‑35 (MQ=255) tGTGGGGCGGTTTTGATACACGTGCATGGGAtgtg > 1:10579384‑M1/2‑35 (MQ=255) GGTGGGGCGGTTTTGATACACGTGCATGGGAtgtg > 1:12750349‑M1/1‑35 (MQ=255) GGTGGGGCGGTTTTGATACACGTGCATGGGAtgtg > 1:16406102‑M1/1‑35 (MQ=255) GTGGGGCGGTTTTGATACACGTGCATGGGATGTgg > 1:19066617‑M1/1‑35 (MQ=255) TGGGGCGGTTTTGATACACGTGCATGGGACGTGGc > 1:3780888‑M1/1‑35 (MQ=255) GGGGCGGTTTTGATACACGTGCATGGGATGTGGCa > 1:13106729‑M1/1‑35 (MQ=255) GGGCGGTTTTGATACACGTGCATGGGATGTGGCaa > 1:16311343‑M1/1‑35 (MQ=255) GGGCGGTTTTGATACACGTGCATGGGATGTGGCaa > 1:18673013‑M1/1‑35 (MQ=255) GGGCGGTTTTGATACACGTGCATGGGATGTGGCaa > 1:2249229‑M1/1‑35 (MQ=255) GGGCGGTTTTGATACACGTGCATGGGANGTGGCaa > 1:15531745‑M1/1‑35 (MQ=255) ggCGGTTTTGATACACGTGCATGGGATGTGGCAAg < 1:15687461/35‑1 (MQ=255) ggCGGTTTTGATACACGTGCATGGGATGTGGCAAg < 1:1257928/35‑1 (MQ=255) | CGGGCATGGCAAGCGAATGAATATGCCGTGGTGGGGCGGTTTTGATACACGTGCATGGGATGTGGCAAG > REL606/558222‑558290 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |