New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2169426 = | 52 (0.510) | 13 (0.160) | 6/38 | NT | 13.2% | coding (329/1158 nt) | yehY | predicted transporter subunit: membrane component of ABC superfamily |
? | REL606 | = 2730083 | 130 (1.600) | coding (2203/2253 nt) | hypF | carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases |
Only 100 of 247 total aligned reads displayed.
TCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAACCGCCATCACCCGCCGGT > REL606/2730049‑2730117 | tCACCCGCTAACCAACGCGCCGCAGCAATAAcccc < 1:11576514/35‑1 (MQ=255) cccccgcTAACCAACGCGCCGCAGCAATAACCCCc > 1:10030078‑M2/3‑34 (MQ=255) aCCCGCTAACCAACGCGCCGCAGCAATAACCCCct < 1:9640583‑M2/35‑3 (MQ=255) aCCCGCTAACCAACGCGCCGCAGCAATAACCCCct > 1:288838‑M2/1‑33 (MQ=255) aCCCGCTAACCAACGCGCCGCAGCAATAACCCCct < 1:1486409‑M2/35‑3 (MQ=255) cccGCTAACCAACGCGCCGCAGCAATAACCCCctg > 1:4658110‑M2/1‑32 (MQ=255) cccGCTAACCAACGCGCCGAAGCAATAACCCCctg > 1:19162950‑M2/1‑32 (MQ=255) ccGCTACCCAACGCGCCGCAGCAATAACCCCctgc > 1:1958201‑M2/1‑31 (MQ=255) ccGCTAACCAACGCGCCGCAGCAATAACCCCctgc < 1:6185667‑M2/35‑5 (MQ=255) ccGCTAACCAACGCGCCGCAGCAATAACCCCctgc < 1:5018383‑M2/35‑5 (MQ=255) ccGCTAACCAACGCGCCGCAGCAATAACCCCctgc < 1:4242470‑M2/35‑5 (MQ=255) acgCTACCCAACGCGCCGCAGCAATAACCCCctgc > 1:395554‑M2/2‑31 (MQ=255) cGCTAACCAACGCGCCGCAGCAATAACCCCctgcc < 1:10681289‑M2/35‑6 (MQ=255) cGCTAACCAACGCGCCGCAGCAATAACCCCctgcc < 1:1603213‑M2/35‑6 (MQ=255) cGCTAACCAACGCGCCGCAGCAATAACACCctgcc > 1:12800169‑M2/1‑30 (MQ=255) gCTAACCAACGCGCCGCAGCAATAACCCCCTGccc < 1:19313744/35‑1 (MQ=255) gCTAACCAACGCGCCGCAGCAATAACCCCCTGccc > 1:11817158/1‑35 (MQ=255) gCTAACCAACGCGCCGCAGCAATAACCCCCTGccc > 1:10087165/1‑35 (MQ=255) cTAACCAACGCGCCGCAGCAATAACCCCCTGcccc < 1:17560163/35‑1 (MQ=255) cTAACCAACGCGCCGCAGCAATAACCCCCTGcccc > 1:8374852/1‑35 (MQ=255) cTAACCAACGCGCCGCAGCAATAACCCCCTGcccc > 1:20028662/1‑35 (MQ=255) cTAACCAACGCGCCGCAGCAATAACCCCCTGcccc > 1:10305964/1‑35 (MQ=255) tAACCAACGCGCCGCAGCAATAACCCCCTGCTCCa > 1:1763121/1‑35 (MQ=255) tAACCAACGCGCCGCAGCAATAACCCCCTGCCCCa > 1:7236348/1‑35 (MQ=255) tAACCAACGCGCCGCAGCAATAACCCCCTGCCCCa < 1:8298275/35‑1 (MQ=255) aaCCAACGCGCCGCAGCAATAACCCCCTGCCCCag < 1:3089785/35‑1 (MQ=255) aaCCAACGCGCCGCAGCAATAACCCCCTGCCCCag < 1:18280128/35‑1 (MQ=255) aCCAACGCGCCGCAGCAATAACCCCCTGCCCCaga > 1:636817/1‑35 (MQ=255) aCCAACGCGCCGCAGCAATAACCCCCTGCCCCaga < 1:8619807/35‑1 (MQ=255) ccAACGCTCCGCAGCAATAACCCCCTGCCCCagag > 1:1665942/1‑35 (MQ=255) ccAACGCGCCGCAGCAATAACCCCCTGCCCCagag < 1:207867/35‑1 (MQ=255) ccAACGCGCCGCAGCAATAACCCCCTGCCCCagag < 1:14401415/35‑1 (MQ=255) ccAACGCGCCGCAGCAATAACCCCCTGCCCCagag > 1:15926950/1‑35 (MQ=255) ccAACGCGCCGCAGCAATAACCCCCTGCCCCagag > 1:18112640/1‑35 (MQ=255) cAACGCGCCGCAGCAATAACCCCCTGCCCCAgaga > 1:7620092/1‑35 (MQ=255) cAACGCGCCGCAGCAATAACCCCCTGCCCCAgaga < 1:16947681/35‑1 (MQ=255) cAACGCGCCGCAGCAATAACCCCCTGCCCCAgaga > 1:3207889/1‑35 (MQ=255) aaCGCGCCGCAGCAATAACCCCCTGCCCCAGAGAc < 1:6081869/35‑1 (MQ=255) aaCGCGCCGCAGCAATAACCCCCTGCCCCAGAGAc > 1:13773700/1‑35 (MQ=255) aaCGCGCCGCAGCAATAACCCCCTGCCCCAGAGAc < 1:6930291/35‑1 (MQ=255) aaCGCGCCGCAGCAATAACCCCCTGCCCAAGAGAc > 1:669472/1‑35 (MQ=255) aCGCGCCGCAGCAATACCCCCCTGCCCCAGAGACa < 1:11607052/35‑1 (MQ=255) aCGCGCCGCAGCAATAACCCCCTGCCCCAGAGACa > 1:17767205/1‑35 (MQ=255) aCGCGCCGCAGCAATAACCCCCTGCCCCAGAGACa < 1:16269427/35‑1 (MQ=255) aCGCGCCGCAGCAATAACCCCCTGCCCCAGAGACa > 1:8723473/1‑35 (MQ=255) aCGCGCCGCAGCAATAACCCCCTGCCCCAGAGACa > 1:2363315/1‑35 (MQ=255) cgcgCCGCAGCAATAACCCCCTGCGCCAGAGACaa < 1:1973801/35‑1 (MQ=255) cgcgCCGCAGCAATAACCCCCTGCCCCAGAGACaa > 1:6764020/1‑35 (MQ=255) cgcgCCGCAGCAATAACCCCCTGCCCCAGAGACaa < 1:4534801/35‑1 (MQ=255) cgcgCCGCAGCAATAACCCCCTGCCCCAGAGACaa > 1:15080639/1‑35 (MQ=255) cgcgCCGCAGCAATAACCCCCTGCCCCAGAGACaa < 1:10844605/35‑1 (MQ=255) gcgcCGCAGCAATAACCCCCTGCCCCAGAGACaaa > 1:16357454/1‑35 (MQ=255) gcgcCGCAGCAATAACCCCCTGCCCCAGAGACaaa > 1:10517460/1‑35 (MQ=255) gcgcCGCAGCAATAACCCCCTGCCCCAGAGACaaa > 1:10545201/1‑35 (MQ=255) gcgcCGCAGCAATAACCCCCTGCCCCAGAGACaaa > 1:2450378/1‑35 (MQ=255) gccccgcAGCAATAACCCCCTGCCCCAGAGACaaa < 1:13472426/32‑1 (MQ=255) cgccgcAGCAATAACCCCCTGCCCCAGAGACAAAc < 1:9900617/35‑1 (MQ=255) cgccgcAGCAATAACCCCCTGCCCCAGAGACAAAc > 1:12447985/1‑35 (MQ=255) cgccgcAGCAATAACCCCCTGCCCCAGAGACAAAc > 1:14193389/1‑35 (MQ=255) gccgcAGCAATAACCCCCTGCCCCAGAGACAAAcc < 1:11872061/35‑1 (MQ=255) gccgcAGCAATAACCCCCTGCCCCAGAGACAAAcc > 1:2409214/1‑35 (MQ=255) gccgcAGCAATAACCCCCTGCCCCAGAGACAAAcc < 1:2872772/35‑1 (MQ=255) gccgcAGCAATAACCCCCTGCCCCAGAGACAAAcc > 1:3616581/1‑35 (MQ=255) gccgcAGCAATAACCCCCTGCCCCAGAGACAAAcc > 1:5969157/1‑35 (MQ=255) gccgcAGCAATAACCCCCTGCCCCAGAGACAAAcc > 1:10408220/1‑35 (MQ=255) ccgcAGCAATACCCCCCTGCCCCAGAGACAAACCg < 1:4855081/35‑1 (MQ=255) ccgcAGCAATAACCCCCTGCCCCAGAGACAAACCg > 1:20428044/1‑35 (MQ=255) ccgcAGCAATAACCCCCTGCCCCAGAGACAAACCg > 1:14993804/1‑35 (MQ=255) ccgcAGCAATAACCCCCTGCCCCAGAGACAAACCg < 1:5995961/35‑1 (MQ=255) cgcAGCAATAACCCCCTGCCCCAGAGACAAACCGc < 1:976360/35‑1 (MQ=255) cgcAGCAATAACCCCCTGCCCCAGAGACAAACCGc > 1:132037/1‑35 (MQ=255) cgcAGCAATAACCCCCTGCCCCAGAGACAAACCGc > 1:19486744/1‑35 (MQ=255) cgcAGCAATAACCCCCTGCCCCAGAGACAAACCGc > 1:1330675/1‑35 (MQ=255) cgcAGCAATAACCCCCTGCCCCAGAGACAAACCGc > 1:13568769/1‑35 (MQ=255) gcagcaATAACCCCCTGCCCCAGAGACAAACCGcc > 1:12961292/1‑35 (MQ=255) ccagcaaAAACCCCctgccgaggctggtacgcgcc > 1:18836726‑M2/2‑14 (MQ=255) cagcaATAACCCCCTGCCCCAGAGACAAACCGCCa > 1:19003243/1‑35 (MQ=255) cagcaATAACCCCCTGCCCCAGAGACAAACCGCCa > 1:19363090/1‑35 (MQ=255) cagcaATAACCCCCTGCCCCAGAGACAAACCGCCa > 1:6353198/1‑35 (MQ=255) cagcaATAACCCCCTGCCCCAGAGACAAACCGCCa > 1:15560223/1‑35 (MQ=255) agcaATAACCCCCTGCCCCAGAGACAAACCGCCAt > 1:15462124/1‑35 (MQ=255) agcaAAAACCCCctgccgaggctggtacgcgccag > 1:774022‑M2/1‑12 (MQ=255) gcaATAACCCCCTGCCCCAGAGACAAACCGCCATc > 1:5280635/1‑35 (MQ=255) caATAACCCCCTGCCCCAGAGACAAACCGCCATCa > 1:5480285/1‑35 (MQ=255) caATAACCCCCTGCCCCAGAGACAAACCGCCATCa > 1:2177696/1‑35 (MQ=255) caATAACCCCCTGCCCCAGAGACAAACCGCCATCa > 1:18643575/1‑35 (MQ=255) aaTAACCCCCTGCCCCAGAGACAAACCGCCATCAc > 1:4271602/1‑35 (MQ=255) aaTAACCCCCTGCCCCAGAGACAAACCGCCATCAc > 1:9055270/1‑35 (MQ=255) aaAAACCCCctgccgaggctggtacgcgccagcgc > 1:10311820‑M2/1‑9 (MQ=255) aaaaccCCctgccgaggctggtacgcgccagcgca > 1:12289531‑M2/3‑8 (MQ=255) tAACCCCCTGCCCCAGAGACAAACCGCCATCAccc > 1:15147358/1‑35 (MQ=255) tAACCCCCTGCCCCAGAGACAAACCGCCATCAccc > 1:7934387/1‑35 (MQ=255) aaacCCCctgccgaggctggtacgcgccagcgcac > 1:13515520‑M2/2‑7 (MQ=255) aaCCCCCTGCCCCAGAGACAAACCGCCATCACccg > 1:11410186/1‑35 (MQ=255) aaCCCCCTGCCCCAGAGACAAACCGCCATCACccg > 1:15619334/1‑35 (MQ=255) aCCCCctgccgaggctggtacgcgccagcgcactg > 1:370236‑M2/1‑5 (MQ=255) aCCCCCTGCCCCAGAGACAAACCGCCATCACccgc > 1:11463481/1‑35 (MQ=255) ccccTGCCCCAGAGACAAACCGCCATCACccgccg > 1:6573672/1‑35 (MQ=255) cccTGCCCCAGAGACAAACCGCCATCACCCGCCgg > 1:7047308/1‑35 (MQ=255) cccTGCCCCAGAGACAAACCGCCATCACCCGCCgg > 1:12206386/1‑35 (MQ=255) | TCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAACCGCCATCACCCGCCGGT > REL606/2730049‑2730117 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |