New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 9904 | 112 (1.090) | 9 (0.100) | 5/42 | NT | 11.5% | intergenic (+13/+22) | mogA/yaaH | molybdenum cofactor biosynthesis protein/conserved inner membrane protein associated with acetate transport |
? | REL606 | 4001993 = | 40 (0.440) | intergenic (+10/‑32) | tatC/tatD | TatABCE protein translocation system subunit/DNase, magnesium‑dependent |
AGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATG > REL606/4001959‑4002027 | aGAAAGCGAAAAAACTGAAGAATAAATTCAACCGc > 1:14610023/1‑35 (MQ=255) gAAAGCTAAAAAACTGAATAATAAATTCAACCGcc > 1:7157131/1‑35 (MQ=37) gAAAGCGAAAAAACTGAAGAATAAATTCAACCGcc > 1:14557111/1‑35 (MQ=255) gAAAGCGAAAAAACTGAAGAATAAATTCAACCGcc > 1:7188889/1‑35 (MQ=255) gAAAGCGAAAAAACTGAAGAATAAATTCAACCCcc > 1:433196/1‑35 (MQ=255) aaaGCGAAAAAACTGAAGAATAAATTCAACCGccc > 1:10063362/1‑35 (MQ=255) aaaGCGAAAAAACTGAAGAATAAATTCAACCGccc > 1:3718434/1‑35 (MQ=255) aaaGCGAAAAAACTGAAGAATAAATTCAACCGccc > 1:6934413/1‑35 (MQ=255) aaaGCGAAAAAACTGAAGAATAAATTCAAACGccc < 1:4104377/35‑1 (MQ=255) aaGCGAAAAAACTGAAGAATAAATTCAACCGCCCg > 1:18348525/1‑35 (MQ=255) aaGCGAAAAAACTGAAGAATAAATTCAACCGCCCg > 1:5838553/1‑35 (MQ=255) aaGCGAAAAAACTGAAGAATAAATTCAACCGCCCg > 1:5867929/1‑35 (MQ=255) aaGCGAAAAAACTGAAGAATAAATTCAACCGCCCg > 1:15417652/1‑35 (MQ=255) aaGCGAAAAAACTCAAGAATAAATTCAACCGCCCg > 1:18985768/1‑35 (MQ=255) aGCGAAAAAACTGAAGAATAAATTCAACCGCCCGt > 1:6933839/1‑35 (MQ=255) aGCGAAAAAACTGAAGAATAAATTCAACCGCCCGt > 1:13948616/1‑35 (MQ=255) gctaaaaaaCTGAAGAATAAATTCAACCGCCCGTc > 1:2374700/4‑35 (MQ=255) gCGAAAAAACTGAAGAATAAATTCAACCGCCCGTc > 1:11888454/1‑35 (MQ=255) gCGAAAAAACTGAAGAATAAATTCAACCGCCCGTc > 1:11597144/1‑35 (MQ=255) cGAAAAAACTGAAGAATAAATTCAACCGCCCGTCa > 1:7781434/1‑35 (MQ=255) cGAAAAAACTGAAGAATAAATTCAACCGCCCGTCa > 1:1485323/1‑35 (MQ=255) gAAAAAACTGAAGAATAAATTCAACCGCCCGTCAg > 1:18446254/1‑35 (MQ=255) gAAAAAACTGAAGAATAAATTCAACCGCCCGTCAg > 1:8374109/1‑35 (MQ=255) gAAAAAACTGAAGAATAAATTCAACCGCCCGTCAg > 1:14512695/1‑35 (MQ=255) aaaaaaCTGAAGAATAAATTCAACCGCCCGTCAgg > 1:10102105/1‑35 (MQ=255) aaaaaaCTGAAGAATAAATTCAACCGCCCGTCAgg > 1:8289608/1‑35 (MQ=255) aaaaaaCTGAAGAATAAATTCAACCGCCCGTCAgg > 1:18441402/1‑35 (MQ=255) aaaaaaCTGAAGAATAAATTCAACCGCCCGTCAgg > 1:18285459/1‑35 (MQ=255) aaaaaCTGAAGAATAAATTCAACCGCCCGTCAggg > 1:8241997/1‑35 (MQ=255) aaaaCTGAAGAATAAATTCAACCGCCCGTCAGGGc > 1:16825408/1‑35 (MQ=255) aaaaCTGAAGAATAAATTCAACCGCCCGTCAGGGc > 1:4487064/1‑35 (MQ=255) aaaaCTGAAGAATAAATTCAACCGCCCGTCAGGGc > 1:373294/1‑35 (MQ=255) aaaCTGAAGAATAAATTCAACCGCCCGTCAGGGCg > 1:17257427/1‑35 (MQ=255) aaaCTGAAGAATAAATTCAACCGCCCGTCAGGGCg > 1:10304395/1‑35 (MQ=255) aaCTGAATAATAAATTCAACCGCCCGTCAGGGCgg > 1:12654259/1‑35 (MQ=255) aaCTGAAGAATAAATTCAACCGCCCGTCAGGGCgg > 1:3467054/1‑35 (MQ=255) aaCTGAAGAATAAATTCAACCGCCCGTCAGGGCgg > 1:8239813/1‑35 (MQ=255) aCTGAAGAATAAATTCAACCGCCCGTCAGGGCggg > 1:11148276/1‑34 (MQ=255) aCTGAAGAATAAATTCAACCGCCCGTCAGGGCggg > 1:4313886/1‑34 (MQ=255) aCTAAAGAAAAAATCCACCCGCCCGTCAGGGCGGt < 1:19501575/35‑1 (MQ=16) cTGATGAATAAATTCAACCGCCCGTCAGGGCgggt > 1:5283638/1‑33 (MQ=37) cTGAAGAATAAATTCAACCGCCCGTCAGGGCgggt > 1:12460278/1‑33 (MQ=255) cTGAAGAATAAATTCAACCGCCCGTCAGGGCgggt > 1:10804099/1‑33 (MQ=255) cTGAAGAATAAATTCAACCGCCCGTCAGGGCgggg > 1:11384203/1‑33 (MQ=255) tGAAGAATAAATTCAACCGCCCGTCAGGGCGGGTg > 1:17524899/1‑35 (MQ=255) gaataaTAAATTCAACCGCCCGTCAGTGCGGTTGt > 1:2665121/1‑35 (MQ=37) gaagaaTAAATTCAACCGCCCGTCAGGGCGGGTgg > 1:2817267/1‑34 (MQ=255) gaagaaTAAATTCAACCGCCCGTCAGGGCGGGTgc > 1:14932021/1‑34 (MQ=255) aagaaTAAATTCAACCGCCCGTCAGGGCGGGTggg > 1:16861782/1‑33 (MQ=38) aagaaTAAATTCAACCGCCCGTCAGGGCGGGTGtg > 1:15133435/1‑34 (MQ=255) agaaTAAATTCAACCGCCCGTCAGGGCGGGTggtg > 1:13570398/1‑32 (MQ=37) agaaTAAATTCAACCGCCCGTCAGGGCGGGTgggg > 1:10055371/1‑32 (MQ=37) aaaaaaatccccccgCCCGTCAGGGCGGTTGTCat < 1:5907627‑M2/20‑1 (MQ=255) aaaaaaatccacccgCCCGTCAGGGCGGTTGTCat < 1:10391100‑M2/20‑1 (MQ=255) aaaaaatccccccgCCCGTCAGGGCGGTTGTCata < 1:982103‑M2/21‑1 (MQ=255) aaTAAATTCAAGCGCCCGTCAGGGCGGTTGTCata < 1:14281841/35‑1 (MQ=255) aaTAAATTCAACCGCCCGTCAGGGCTGGTGTCata > 1:4859612/1‑35 (MQ=38) aTAAATTCAACCGCCCGTCAGGGCTGGTGTCatat > 1:18436526/1‑35 (MQ=37) aTAAATTCAACCGCCCGTCAGGGCGGGTGTCatat > 1:7114139/1‑35 (MQ=255) caaatccccccgCCCGTCAGGGCGGTTGTCATATg < 1:20251378‑M2/23‑1 (MQ=255) aaaatccacccgCCCGTCAGGGCGGTTGTCATATg < 1:9230855‑M2/23‑1 (MQ=255) aaaatccacccgCCCGTCAGGGCGGTTGTCATATg < 1:2063598‑M2/23‑1 (MQ=255) aaatccacccgCCCGTCAGGGCGGTTGTCATATgg < 1:16888636‑M2/24‑1 (MQ=255) atccccccgCCCGTCAGGGCGGTTGTCATATGGAg < 1:10981631‑M2/26‑1 (MQ=255) atccacccgCCCGTCAGGGCGGTTGTCATATGGAg < 1:17899403‑M2/26‑1 (MQ=255) tccccccgCCCGTCAGGGCGGTTGTCATATGGAGt < 1:16254958‑M2/27‑1 (MQ=255) tccacccgCCCGTCAGGGCGGTTGTCATATGGAGt < 1:11331416‑M2/27‑1 (MQ=255) tccacccgCCCGTCAGGGCGGTTGTCATATGGAGt < 1:19881034‑M2/27‑1 (MQ=255) ccccccgCCCGTCAGGGCGGTTGTCATATGGAGTa < 1:4161896‑M2/28‑1 (MQ=255) ccccccgCCCGTCAGGGCGGTTGTCATATGGAGTa < 1:19672628‑M2/28‑1 (MQ=255) ccccccgCCCGTCAGGGCGGTTGTCATATGGAGTa < 1:13694448‑M2/28‑1 (MQ=255) ccacccgCCCGTCAGGGCGGTTGTCATATGGAGTa < 1:19118505‑M2/28‑1 (MQ=255) acccccgCCCGTCAGGGCGGTTGTCATATGGAGTa < 1:4623038‑M2/28‑1 (MQ=255) tcccgCCCGTCAGGGCGGTTGTCATATGGAGTACa < 1:16689180‑M2/30‑1 (MQ=255) ccccgCCCGTCAGGGCGGTTGTCATATGGAGTACa < 1:5335882‑M2/30‑1 (MQ=255) agccgCCCGTCAGGGCGGTTGTCATATGGAGTACa < 1:17622551‑M2/30‑1 (MQ=255) cccgCCCGTCAGGGCGGTTGTCATATGGAGTACAg < 1:7352113‑M2/31‑1 (MQ=255) cccgCCCGTCAGGGCGGTTGTCATATGGAGTACAg < 1:20309400‑M2/31‑1 (MQ=255) ccgCCCGTCAGGGCGGTTGTCATATGGAGTACAgg < 1:7377565‑M2/32‑1 (MQ=255) ccgCCCGTCAGGGCGGTTGTCATATGGAGTACAgg < 1:18288882‑M2/32‑1 (MQ=255) cgCCCGTCAGGGCGGTTGTCATATGGAGTACAGGa < 1:18379752‑M2/33‑1 (MQ=255) gCCCGTCAGGGCGGTTGTCATATGGAGTACAGGAt < 1:14523210‑M2/34‑1 (MQ=255) gCCCGTCAGGGCGGTTGTCATATGGAGTACAGGAt < 1:14494418‑M2/34‑1 (MQ=255) gCCCGTCAGGGCGGTTGTCATATGGAGTACAGGAt < 1:19598121‑M2/34‑1 (MQ=255) cccGTCAGGGCGGTTGTCATATGGAGTACAGGATg < 1:7182175/35‑1 (MQ=255) cccGTCAGGGCGGTTGTCATATGGAGTACAGGATg < 1:15508206/35‑1 (MQ=255) | AGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATG > REL606/4001959‑4002027 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |