New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2131846 | 71 (0.690) | 4 (0.040) | 3/46 | NT | 7.0% | coding (848/1053 nt) | fbaB | fructose‑bisphosphate aldolase |
? | REL606 | 2517490 = | 38 (0.390) | coding (76/864 nt) | ypfJ | hypothetical protein |
Only 100 of 107 total aligned reads displayed.
GCCTGCAGCACCGCCGGAGTTTATCAACCCGGCCCGGCCCATATAGCAGTTAGCTAACTGATAACGCAC > REL606/2131812‑2131880 | gCCTGCAGCACCGCCGGAGTTTATCAACCCGGCCC > 1:12135044‑M1/1‑35 (MQ=255) cccTGCACCCCCGCCGGAGTTTATCAAcccggccc < 1:16306351/34‑1 (MQ=37) ccTGCAGCACCGCCGGAGTTTATCAAcccggcccg > 1:2998473/1‑35 (MQ=255) ccTGCAGCACCGCCGGAGTTTATCAAcccggcccg > 1:5789703/1‑35 (MQ=255) ccTCCAGCCCCGCCGGAGTTTATCAAcccggcccg < 1:5524420/35‑1 (MQ=37) cTGCAGCACCGCCGGAGTTTATCAAcccggcccgg > 1:18356930/1‑35 (MQ=255) tGCAGCACCGCCGGAGTTTATCAACccggcccggc > 1:11158424/1‑35 (MQ=255) tGCAGCACCGCCGGAGTTTATCAACccggcccggc > 1:4736951/1‑35 (MQ=255) gcagcaCCGCCGGAGTTTATCAACCcggcccggcc > 1:577874/1‑35 (MQ=255) gccccgccgGAGTTTATCAACCCGGCCCGGCCCat < 1:17163859/32‑1 (MQ=255) gcaCCGCCGGAGTTTATCAACCCGGCCCGGCCCat > 1:6424936/1‑35 (MQ=255) gcaCCGCCGGAGTTTATCAACCCGGCCCGGCCCat > 1:876752/1‑35 (MQ=255) cccccgccgGAGTTTATCAACCCGGCCCGGCCCat < 1:13964064/32‑1 (MQ=255) ccccgccgGAGTTTATCAACCCGGCCCGGCCCata < 1:8998371/33‑1 (MQ=255) ccccgccgGAGTTTATCAACCCGGCCCGGCCCata < 1:13204304/33‑1 (MQ=255) ccccgccgGAGTTTATCAACCCGGCCCGGCCCata < 1:6630609/33‑1 (MQ=255) ccccgccgGAGTTTATCAACCCGGCCCGGCCCata < 1:10543245/33‑1 (MQ=255) caCCGCCGGAGTTTATCAACCCGGCCCGGCCCata > 1:11940955/1‑35 (MQ=255) cccgccgGAGTTTATCAACCCGGCCCGGCCCatat < 1:19105596/34‑1 (MQ=255) aCCGCCGGAGTTTATCAACCCGGCCCGGCCCatat > 1:18518247/1‑35 (MQ=255) aCCGCCGGAGTTTATCAACCCGGCCCGGACCacat > 1:9396642/1‑35 (MQ=38) ccgccgGAGTTTATCAACCCGGCCCGGCCCAtata < 1:4987577/35‑1 (MQ=255) ccgccgGAGTTTATCAACCCGGCCCGGCCCAtata > 1:15380688/1‑35 (MQ=255) cgacgGAGTTTATCAACCCGGCCCGGCCCATATAg < 1:9539191/32‑1 (MQ=255) gccgGAGTTTATCAACCCGGCCCGGCCCATATAGc > 1:6337146/1‑35 (MQ=255) gccgGAGTTTATCAACCCGGCCCGGCCCATATAGc < 1:15509817/35‑1 (MQ=255) ccgGAGTTTATCAACCCGGCCCGGCCCATATAGCa < 1:9434593/35‑1 (MQ=255) cgGAGTTTATCAACCCGGCCCGGCCCATATAGCAg > 1:2267539/1‑35 (MQ=255) cgGAGTTTATCAACCCGGCCCGGCCCATATAGCAg > 1:19600961/1‑35 (MQ=255) cgGAGTTTATCAACCCGGCCCGGCCCATATAGCAg > 1:16657804/1‑35 (MQ=255) cgGAGTTTATCAACCCGGCCCGGCCCATATAGCAg > 1:5854382/1‑35 (MQ=255) cgGAGTTTATCAACCCGGCCCGGCCCATATAGCAg < 1:15947764/35‑1 (MQ=255) cgGAGTTTATCAACCCGGCCCGCCCCATATAGCAg > 1:11625149/1‑35 (MQ=255) cgGAGTTTATCAACCCCGCCCGGCCCATATCGccg > 1:7434505/1‑33 (MQ=25) ggAGTTTATCAACCCGGCCCGGCCCATATAGCAGt > 1:1119009/1‑35 (MQ=255) gattttATCAACCCGGCCCGTCCCATATAGCAGtt < 1:1908983/32‑1 (MQ=37) gAGTTTATCACCCCGGCCCGGCCCATATAGCAGtt < 1:7592488/35‑1 (MQ=255) gAGTTTATCAACCCGGCCCGGCCCATATAGCAGtt < 1:2780933/35‑1 (MQ=255) gAGTTTATCAACCCGGCCCGGCCCATATAGCAGtt < 1:6429402/35‑1 (MQ=255) gAGTTTATCAACCCGGCCCGGCCCATATAGCAGtt > 1:17503170/1‑35 (MQ=255) aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa > 1:15724570/1‑35 (MQ=255) aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa > 1:4346084/1‑35 (MQ=255) aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa < 1:1575401/35‑1 (MQ=255) aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa > 1:1269765/1‑35 (MQ=255) aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa > 1:16602839/1‑35 (MQ=255) aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa > 1:16460833/1‑35 (MQ=255) aGTTTATCAACCCGGCCCGGCCCATATAGCAGTTa > 1:16064651/1‑35 (MQ=255) gtctATCAACCCGGCCCGGCCCATATAGCAGTTAg > 1:8728234/4‑35 (MQ=255) gTTTATCAACCCGGCCCGGCCCATATAGCAGTTAg < 1:7754764/35‑1 (MQ=255) gTTTATCAACCCGGCCCGGCCCATATAGCAGTTAg < 1:13179114/35‑1 (MQ=255) tttATCAACCCGGCCCGGCCCATATAGCAGTTAGc > 1:982004/1‑35 (MQ=255) ttATCAACCCGGCCCGGCCCATATAGCAGTTAGCt < 1:6786743/35‑1 (MQ=255) ttATCAACCCGGCCCGGCCCATATAGCAGTTAGCt > 1:12811244/1‑35 (MQ=255) tATCAACCCGGCCCGGCCCATATAGCAGTTAGCTa < 1:1299267/35‑1 (MQ=255) tATCAACCCGGCCCGGCCCATATAGCAGTTAGCTa > 1:14828572/1‑35 (MQ=255) tATCAACCCGGCCCGGCCCATATAGCAGTTAGCTa < 1:8203285/35‑1 (MQ=255) ttCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa < 1:14497458/34‑1 (MQ=255) aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa < 1:669363/35‑1 (MQ=255) aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa > 1:7287298/1‑35 (MQ=255) aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa > 1:5983415/1‑35 (MQ=255) aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa > 1:7713849/1‑35 (MQ=255) aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa > 1:17979941/1‑35 (MQ=255) aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa > 1:9366056/1‑35 (MQ=255) aTCAACCCGGCCCGGCCCATATAGCAGTTAGCTaa < 1:11200333/35‑1 (MQ=255) tCAACCCGGCCCGGCCCATATAGCAGTTAGCTAAc < 1:964101/35‑1 (MQ=255) tCAACCCGGCCCGGCCCATATAGCAGTTAGCTAAc > 1:14028452/1‑35 (MQ=255) cgaCCCGGCCCGGCCCATATAGCAGTTAGCTAACt < 1:12006876/33‑1 (MQ=255) cAACCCGGCCCGGCCCATATAGCAGTTAGCTAACt < 1:1874068/35‑1 (MQ=255) cAACCCGGCCCGGCCCATATAGCAGTTAGCTAACt < 1:6750592/35‑1 (MQ=255) aaCCCGGCCCcgcccatagatggaccaccagagct < 1:9533917‑M1/35‑26 (MQ=255) aaCCCGGCCCGGCCCATATAGCAGTTAGCTAACTg < 1:6069525/35‑1 (MQ=255) aCCCGGCCCcgcccatagatggaccaccagagctg < 1:11478054‑M1/35‑27 (MQ=255) aCCCGGCCCcgcccatagatggaccaccagagctg < 1:8847089‑M1/35‑27 (MQ=255) aCCCGGCCCGGCCCATATAGCAGTTAGCTAACTGa > 1:7356187/1‑35 (MQ=255) cccggcccggCCCATATAGCAGTTAGCTAACTGAt > 1:9171589/1‑35 (MQ=255) cccGGCCCcgcccatagatggaccaccagagctgt < 1:6092893‑M1/35‑28 (MQ=255) ccggcccggcCCATATAGCAGTTAGCTAACTGATa < 1:4909671/35‑1 (MQ=255) cggcccggccCATATAGCAGTTAGCTAACTGATaa > 1:10982099/1‑35 (MQ=255) cggcccggccCATATAGCAGTTAGCTAACTGATaa < 1:13763706/35‑1 (MQ=255) cggcccggccCATATAGCAGTTAGCTAACTGATaa < 1:3422570/35‑1 (MQ=255) ggcccggcccATATAGCAGTTAGCTAACTGATAAc < 1:19095290/35‑1 (MQ=255) ggCCCcgcccatagatggaccaccagagctgttgc < 1:20403071‑M1/35‑31 (MQ=255) ggCCCcgcccatagatggaccaccagagctgttgc < 1:20179815‑M1/35‑31 (MQ=255) ggCCCcgcccatagatggaccaccagagctgttgc < 1:1909173‑M1/35‑31 (MQ=255) ggcccgcccatagatggaccaccagagctgttgcg < 1:271233‑M1/33‑32 (MQ=255) gcccggcccATATAGCAGTTAGCTAACTGATAACg < 1:6310186/35‑1 (MQ=255) cccggcccATATAGCAGTTAGCTAACTGATAACGc < 1:5881389/35‑1 (MQ=255) cccggcccATATAGCAGTTAGCTAACTGATAACGc > 1:13021623/1‑35 (MQ=255) ccccgcccatagatggaccaccagagctgttgcgc < 1:19893074‑M1/35‑33 (MQ=255) ccggcccATATAGCAGTTAGCTAACTGATAACGCa > 1:16731761/1‑35 (MQ=255) ccggcccATATAGCAGTTAGCTAACTGATAACGCa > 1:14724638/1‑35 (MQ=255) ccggcccATATAGCAGTTAGCTAACTGATAACGCa > 1:6403633/1‑35 (MQ=255) ccggcccATATAGCAGTTAGCTAACTGATAACGCa > 1:19844372/1‑35 (MQ=255) cccgcccatagatggaccaccagagctgttgcgcc < 1:11400163‑M1/35‑34 (MQ=255) cccgcccatagatggaccaccagagctgttgcgcc < 1:11257680‑M1/35‑34 (MQ=255) cggcccATATAGCAGTTAGCTAACTGATAACGCAc > 1:16968045/1‑35 (MQ=255) cggcccATATAGCAGTTAGCTAACTGATAACGCAc < 1:5548825/35‑1 (MQ=255) cggcccATATAGCAGTTAGCTAACTGATAACGCAc > 1:11115988/1‑35 (MQ=255) ccgcccatagatggaccaccagagctgttgcgcct < 1:2661434‑M1/35‑35 (MQ=255) ccgcccatagatggaccaccagagctgttgcgcct > 1:6091900‑M1/1‑1 (MQ=255) | GCCTGCAGCACCGCCGGAGTTTATCAACCCGGCCCGGCCCATATAGCAGTTAGCTAACTGATAACGCAC > REL606/2131812‑2131880 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |