Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 4,613,019 +TT :: IS150 (+) 100% intergenic (‑16/‑91) smp ← / → serB hypothetical protein/3‑phosphoserine phosphatase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 664686 =NA (NA)139 (1.350) 45/48 NT 100% intergenic (‑77/‑49) gltL/insJ‑2 ATP‑binding protein of glutamate/aspartate transport system; b0652_1/IS150 hypothetical protein
?REL606 = 4613019 0 (0.000)intergenic (‑16/‑90) smp/serB hypothetical protein/3‑phosphoserine phosphatase
* ? REL606 = 3894996NA (NA)114 (1.160) 38/46 NT 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 4613020 = 0 (0.000)intergenic (‑17/‑89) smp/serB hypothetical protein/3‑phosphoserine phosphatase

Only 100 of 206 total aligned reads displayed.

TCAGTTTTGTGCGAGCCATCTTCCACCCTTTGAAAATTTGAGACTTAATGTTGCCAGAAGCAATGGATA  >  REL606/4612985‑4613053
                                  |                                  
tCAGTTTTGTGCGAGCCATCTTCCACCCTTTGaaa                                    >  1:303077/1‑35 (MQ=255)
tCAGTTTTGTGCGAGCCATCTTCCACCCTTTGaaa                                    >  1:198324/1‑35 (MQ=255)
tCAGTTTTGTGCGAGCCATCTTCCACCCTTTGaaa                                    <  1:5769008/35‑1 (MQ=255)
gcAGTTTTGTGCGAGCCATCTTCCACACTTTGaaa                                    <  1:168367/34‑1 (MQ=255)
 cAGTTTTGTGCGAGCCATCTTCCACCCTTTGAAAt                                   <  1:11190466‑M2/35‑2 (MQ=255)
  aGTTTTGTGCGAGCCATCTTCCACCCTTTGAAAtt                                  >  1:19283449‑M2/1‑33 (MQ=255)
   gTTTTGTGCGAGCCATCTTCCACCCTTTGAAAttt                                 <  1:8259346‑M2/35‑4 (MQ=255)
     tttGTGCGAGCCATCTTCCACCCTTTGAAAtttgt                               >  1:6593483‑M2/1‑30 (MQ=255)
     tttGTGCGAGCCATCTTCCACCCTTTGAAAtttgt                               <  1:11069007‑M2/35‑6 (MQ=255)
      ttGTGCGAGCCATCTTCCACCCTTTGAAAtttgta                              >  1:10487688‑M2/1‑29 (MQ=255)
      ttGTGCGAGCCATCTTCCACCCTTTGAAAtttgta                              >  1:7729859‑M2/1‑29 (MQ=255)
       tgtgCGAGCCATCTTCCACCCTTTGAAAtttgtac                             >  1:2451480‑M2/1‑28 (MQ=255)
        gtgCGAGCCATCTTCCACCCTTTGAAAtttgtact                            >  1:10892625‑M2/1‑27 (MQ=255)
        gtgCGAGCCATCTTCCACCCTTTGAAAtttgtact                            >  1:14962005‑M2/1‑27 (MQ=255)
        gtgCGAGCCATCTTCCACCCTTTGAAAtttgtact                            <  1:317460‑M2/35‑9 (MQ=255)
         tgCGAGCCATCTTCCACCCTTTGAAAtttgtactg                           >  1:3780583‑M2/1‑26 (MQ=255)
          gCGAGCCATCTTCCACCCTTTGAAAtttgtactgc                          <  1:13253012‑M2/35‑11 (MQ=255)
          gCGAGCAATCTTCCACCCTTTGAAAtttgtactgc                          >  1:2571125‑M2/1‑25 (MQ=255)
           cGAGCCATCTTCCACCCTTTGAAAtttgtactgca                         <  1:14253228‑M2/35‑12 (MQ=255)
           cGAGCCATCTTCCACCCTTTGAAAtttgtactgca                         <  1:1750036‑M2/35‑12 (MQ=255)
           cGAGCCATCTTCCACCCTTTGAAAtttgtactgca                         >  1:15672076‑M2/1‑24 (MQ=255)
           cGAGCCATCTTCCACCCTTTGAAAtttgtactgca                         >  1:4085487‑M2/1‑24 (MQ=255)
            gAGCCATCTTCCACCCTTTGAAAtttgtactgcac                        <  1:13513763‑M2/35‑13 (MQ=255)
            gAGCCATCTTCCACCCTTTGAAAtttgtactgcac                        >  1:3290360‑M2/1‑23 (MQ=255)
            gAGCCATCTTCCACCCTTTGAAAtttgtactgcac                        <  1:14605840‑M2/35‑13 (MQ=255)
            gAGCCATCTTCCACCCTTTGAAAtttgtactgcac                        >  1:4773024‑M2/1‑23 (MQ=255)
              gCCATCTTCCACCCTTTGAAAtttgtactgcaccc                      >  1:2809934‑M2/1‑21 (MQ=255)
              gCCATCTTCCACCCTTTGAAAtttgtactgcaccc                      <  1:1803311‑M2/35‑15 (MQ=255)
              gCCATCTTCCACCCTTTGAAAtttgtactgcaccc                      >  1:16690858‑M2/1‑21 (MQ=255)
               ccATCTTCCACCCTTTGAAGtttgtactgcaccca                     >  1:12929704‑M2/1‑20 (MQ=255)
               ccATCTTCCACCCTTTGAAAtttgtactgcaccca                     <  1:19117665‑M2/35‑16 (MQ=255)
               ccATCTTCCACCCTTTGAAAtttgtactgcaccca                     <  1:4820886‑M2/35‑16 (MQ=255)
               ccATCTTCCACCCTTTGAAAtttgtactgcaccca                     <  1:9687312‑M2/35‑16 (MQ=255)
                cATCTTCCACCCTTTGAAAtttgtactgcacccat                    <  1:14653044‑M2/35‑17 (MQ=255)
                cATCTTCCACCCTTTGAAAtttgtactgcacccat                    <  1:835056‑M2/35‑17 (MQ=255)
                cATCTTCCACCCTTTGAAAtttgtactgcacccat                    <  1:19502128‑M2/35‑17 (MQ=255)
                cATCTTCCACCCTTTGAAAtttgtactgcacccat                    <  1:2166452‑M2/35‑17 (MQ=255)
                cATCTTCCACCCTTTGAAAtttgtactgcacccat                    >  1:5268660‑M2/1‑19 (MQ=255)
                 aTCTTCCACCCTTTGAAAtttgtactgcacccatt                   >  1:18662530‑M2/1‑18 (MQ=255)
                 aTCTTCCACCCTTTGAAAtttgtactgcacccatt                   <  1:4569408‑M2/35‑18 (MQ=255)
                 aTCTTCCACCCTTTGAAAtttgtactgcacccatt                   <  1:10006959‑M2/35‑18 (MQ=255)
                  tCTTCCACCCTTTGAAAtttgtactgcacctattt                  <  1:5584802‑M2/35‑19 (MQ=255)
                  tCTTCCACCCTTTGAAAtttgtactgcacccattt                  >  1:4971545‑M2/1‑17 (MQ=255)
                   cTTCCACCCTTTGAAAtttgtactgcacccatttt                 <  1:3933242‑M2/35‑20 (MQ=255)
                   cTTCCACCCTTTGAAAtttgtactgcacccatttt                 <  1:2992080‑M2/35‑20 (MQ=255)
                    ttCCACCCTTTGAAAtttgtactgcacccattttg                >  1:17684854‑M2/1‑15 (MQ=255)
                    ttCCACCCTTTGAAAtttgtactgcacccattttg                <  1:1790061‑M2/35‑21 (MQ=255)
                    ttCCACCCTTTGAAAtttgtactgcacccattttg                >  1:6066973‑M2/1‑15 (MQ=255)
                    ttCCACCCTTTGAAAtttgtactgcacccattttg                <  1:1547994‑M2/35‑21 (MQ=255)
                     tCCACCCTTTGAAAtttgtactgcacccattttgt               <  1:4256666‑M2/35‑22 (MQ=255)
                     tCCACCCTTTGAAAtttgtactgcacccattttgt               >  1:3422454‑M2/1‑14 (MQ=255)
                     tCCACCCTTTGAAAtttgtactgcacccattttgt               >  1:15789193‑M2/1‑14 (MQ=255)
                     tCCACCCTTTGAAAtttgtactgcacccattttgt               <  1:1831097‑M2/35‑22 (MQ=255)
                      ccACCCTTTGAAAtttgtactgcacccattttgtt              >  1:16350940‑M2/1‑13 (MQ=255)
                       cACCCTTTGAAAtttgtactgcacccattttgttg             <  1:15025159‑M2/35‑24 (MQ=255)
                       cACCCTTTGAAAtttgtactgcacccattttgttg             >  1:18066957‑M2/1‑12 (MQ=255)
                        aCCCTTTGAAAtttgtactgcacccattttgttgg            >  1:7998966‑M2/1‑11 (MQ=255)
                        aCCCTTTGAAAtttgtactgcacccattttgttgg            <  1:7646432‑M2/35‑25 (MQ=255)
                        aCCCTTTGAAAtttgtactgcacccattttgttgg            <  1:12489198‑M2/35‑25 (MQ=255)
                        aCCCTTTGAAAtttgtactgcacccattttgttgg            >  1:14127314‑M2/1‑11 (MQ=255)
                        aCCCTTTGAAAtttgtactgcacccattttgttgg            <  1:19221906‑M2/35‑25 (MQ=255)
                         cccTTTGAAAtttgtactgcacccattttgttgga           >  1:17596520‑M2/1‑10 (MQ=255)
                          ccTTTGAAAtttgtactgcacccattttgttggac          >  1:7773074‑M2/1‑9 (MQ=255)
                           cTTTGAAAtttgtactgcacccattttgttggacg         >  1:1435591‑M2/1‑8 (MQ=255)
                           cTTTGAAAtttgtactgcacccattttgttggacg         <  1:17383977‑M2/35‑28 (MQ=255)
                           cTTTGAAAtttgtactgcacccattttgttggacg         <  1:14880756‑M2/35‑28 (MQ=255)
                           cTTTGAAAtttgtactgaacccattttgttggacg         >  1:3527261‑M2/1‑8 (MQ=255)
                            tttGAAAtttgtactgcacccattttgttggacga        <  1:7375556‑M2/35‑29 (MQ=255)
                            tttGAAAtttgtactgcacccattttgttggacga        <  1:17179285‑M2/35‑29 (MQ=255)
                            tttGAAAtttgtactgcacccattttgttggacga        <  1:14303696‑M2/35‑29 (MQ=255)
                             ttGAAAtttgtactgcacccattttgttggacgat       >  1:10083207‑M2/1‑6 (MQ=255)
                             ttGAAAtttgtactgcacccattttgttggacgat       <  1:11821936‑M2/35‑30 (MQ=255)
                             ttGAAAtttgtactgcacccattttgttggacgat       >  1:1419831‑M2/1‑6 (MQ=255)
                             ttGAAAtttgtactgcacccattttgttggacgat       >  1:12358788‑M2/1‑6 (MQ=255)
                              tGAAAtttgtactgcacccattttgttggacgatg      >  1:13870939‑M2/1‑5 (MQ=255)
                              tGAAAtttgtactgcacccattttgttggacgatg      <  1:6549959‑M2/35‑31 (MQ=255)
                              tGAAAtttgtactgcacccattttgttggacgatg      >  1:16716455‑M2/1‑5 (MQ=255)
                              tGAAAtttgtactgcacccattttgttggacgatg      <  1:11482850‑M2/35‑31 (MQ=255)
                              tGAAAtttgtactgcacccattttgttggacgatg      <  1:9306884‑M2/35‑31 (MQ=255)
                               gAAAtttgtactgcacccattttgttggacgatga     >  1:7244517‑M2/1‑4 (MQ=255)
                                aaatttgtactgcacccattttgttggacgatgaa    >  1:9416534‑M2/1‑3 (MQ=255)
                                aaatttgtactgcacccattttgttggacgatgaa    >  1:9627609‑M2/1‑3 (MQ=255)
                                aaatttgtactgcacccattttgttggacgatgaa    <  1:3678123‑M2/35‑33 (MQ=255)
                                aaatttgtactgcacccattttgttggacgatgaa    <  1:12745449‑M2/35‑33 (MQ=255)
                                 catgtgtactgcacccattttgttggacgatgaaa   <  1:20114320‑M2/34‑34 (MQ=255)
                                 catgtgtactgcacccattttgttggacgatgaaa   <  1:12223212‑M2/34‑34 (MQ=255)
                                 aatttgtactgcacccattttgttggacgatgaaa   <  1:14001529‑M2/35‑34 (MQ=255)
                                 aatttgtactgcacccattttgttggacgatgaaa   <  1:18946184‑M2/35‑34 (MQ=255)
                                 aatttgtactgcacccattttgttggacgatgaaa   <  1:10113413‑M2/35‑34 (MQ=255)
                                 aatttgtactgcacccattttgttggacgatgaaa   >  1:10681655‑M2/1‑2 (MQ=255)
                                 aatttgtactgcacccattttgttggacgatgaaa   <  1:2048123‑M2/35‑34 (MQ=255)
                                 aatttgtactgcacccattttgttggacgatgaaa   <  1:12305354‑M2/35‑34 (MQ=255)
                                  atttgtactgcacccattttgttggacgatgaaat  <  1:7037569‑M2/35‑35 (MQ=255)
                                  atttgtactgcacccattttgttggacgatgaaat  >  1:19526277‑M2/1‑1 (MQ=255)
                                  atttgtactgcacccattttgttggacgatgaaat  <  1:6136462‑M2/35‑35 (MQ=255)
                                  atttgtactgcacccattttgttggacgatgaaat  <  1:1816326‑M2/35‑35 (MQ=255)
                                  atttgtactgcacccattttgttggacgatgaaat  <  1:5702173‑M2/35‑35 (MQ=255)
                                  atttgtactgcacccattttgttggacgatgaaat  <  1:15367327‑M2/35‑35 (MQ=255)
                                  atttgtactgcacccattttgttggacgatgaaat  >  1:5401886‑M2/1‑1 (MQ=255)
                                  atgtgtactgcacccattttgttggacgatgaaat  <  1:6770526‑M2/35‑35 (MQ=255)
                                  |                                  
TCAGTTTTGTGCGAGCCATCTTCCACCCTTTGAAAATTTGAGACTTAATGTTGCCAGAAGCAATGGATA  >  REL606/4612985‑4613053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.