New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3780471 = | 81 (0.790) | 7 (0.120) | 4/28 | NT | 14.0% | coding (503/1359 nt) | ECB_03520 | conserved hypothetical protein |
? | REL606 | = 4600662 | 39 (0.650) | coding (33/606 nt) | osmY | periplasmic protein |
Only 100 of 209 total aligned reads displayed.
GGTGAGTGGTTTCCAAAATCTGAACGTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTCTATCGGT > REL606/3780437‑3780505 | ggTGAGTGGTTTCCAAAATCTGAACGTCCTGTtgc > 1:14479157/1‑35 (MQ=255) ggTGAGTGGTTTCCAAAATCTGAACGTCCTGTtgc > 1:7096886/1‑35 (MQ=255) ggTGAGTGGTTTCCAAAATCTGAACGTCCTGTtgc < 1:6427386/35‑1 (MQ=255) gatgactatgacaagactgaagatttcgaaaactc < 1:19455258‑M1/1‑1 (MQ=255) gatgactatgacaagactgaagatttcgaaaactc < 1:1920423‑M1/1‑1 (MQ=255) atgactatgacaagactgaagatttcgaaaactct > 1:13694082‑M1/34‑35 (MQ=255) atgactatgacaagactgaagatttcgaaaactct < 1:1325700‑M1/2‑1 (MQ=255) atgactatgacaagactgaagatttcgaaaactct > 1:6659907‑M1/34‑35 (MQ=255) atgactatgacaagactgaagatttcgaaaactct > 1:606854‑M1/34‑35 (MQ=255) atgactatgacaagactgaagatttcgaaaactct < 1:17289871‑M1/2‑1 (MQ=255) atgactatgacaagactgaagatttcgaaaactct < 1:15585503‑M1/2‑1 (MQ=255) tgactatgacaagactgaagatttcgaaaactctg > 1:16271770‑M1/33‑35 (MQ=255) tgactatgacaagactgaagatttcgaaaactctg > 1:20405193‑M1/33‑35 (MQ=255) tGAGTGGTTTCCAAAATCTGAACGTCCTGTtgctg > 1:3089822/1‑35 (MQ=255) tGAGTGGTTTCCAAAATCTGAACGTCCTGTtgctg > 1:19015793/1‑35 (MQ=255) gactatgacaagactgaagatttcgaaaactctgc < 1:15705951‑M1/4‑1 (MQ=255) gactatgacaagactgaagatttcgaaaactctgc < 1:844288‑M1/4‑1 (MQ=255) gactatgacaagactgaagatttcgaaaactctgc > 1:20292635‑M1/32‑35 (MQ=255) actatgacaagactgaagatttcgaaaactctgct < 1:7997120‑M1/5‑1 (MQ=255) actatgacaagactgaagatttcgaaaactctgct > 1:511890‑M1/31‑35 (MQ=255) actatgacaagactgaagatttcgaaaactctgct > 1:12482427‑M1/31‑35 (MQ=255) ctatgacaagactgaagatttcgaaaactctgctg < 1:10498160‑M1/6‑1 (MQ=255) ctatgacaagactgaagatttcgaaaactctgctg < 1:20255057‑M1/6‑1 (MQ=255) ctatgacaagactgaagatttcgaaaactctgctg > 1:56710‑M1/30‑35 (MQ=255) tatgacaagactgaagatttcgaaaactCTgctgg > 1:1832209‑M1/29‑35 (MQ=255) tatgacaagactgaagatttcgaaaactCTgctgg < 1:19068818‑M1/7‑1 (MQ=255) tatgacaagactgaagatttcgaaaactCTgctgg > 1:5745571‑M1/29‑35 (MQ=255) tatgacaagactgaagatttcgaaaactCTgctgg > 1:17503288‑M1/29‑35 (MQ=255) tatgacaagactgaagatttcgaaaactCTgctgg < 1:16851481‑M1/7‑1 (MQ=255) tGGTTTCCAAAATCTGAACGTCCTGTTGCTgctgg > 1:3371810/1‑35 (MQ=255) ggTTTCCAAAATCTGAACGTCCTGTTGCTgttggc < 1:18565299/35‑1 (MQ=255) ggTTTCCAAAATCTGAACGTCCTGTTGCTgctggc > 1:8395952/1‑35 (MQ=255) ggTTTCCAAAATCTGAACGTCCTGTTGCTgctggc < 1:17831944/35‑1 (MQ=255) atgacaagactgaagatttcgaaaactCTgctggc > 1:10811749‑M1/28‑35 (MQ=255) atgacaagactgaagatttcgaaaactCTgctggc < 1:19901730‑M1/8‑1 (MQ=255) atgacaagactgaagatttcgaaaactCTgctggc < 1:5390168‑M1/8‑1 (MQ=255) atgacaagactgaagatttcgaaaactCTgctggc < 1:2440542‑M1/8‑1 (MQ=255) tgacaagactgaagatttcgaaaactCTgctggct < 1:12328112‑M1/9‑1 (MQ=255) tgacaagactgaagatttcgaaaactCTgctggct > 1:15993667‑M1/27‑35 (MQ=255) tgacaagactgaagatttcgaaaactCTgctggct < 1:9357111‑M1/9‑1 (MQ=255) tgacaagactgaagatttcgaaaactCTgctggct < 1:8048150‑M1/9‑1 (MQ=255) gTTTCCAAAATCTGAACGTCCTGTTGCTgctggct > 1:10985125/1‑35 (MQ=255) gTTTCCAAAATCTGAACGTCCTGTTGCTgctggct < 1:19131187/35‑1 (MQ=255) gTTTCCAAAATCTGAACGTCCTGTTGCTgctggct < 1:16953414/35‑1 (MQ=255) gTTTCCAAAATCTGAACGTCCTGTTGCTgctggct < 1:7785406/35‑1 (MQ=255) tttCCAAAATCTGACCGTCCTGTTGCTgctggctg < 1:14816525/35‑1 (MQ=255) tttCCAAAATCTGAACGTCCTGTTGCTgctggctg < 1:5046324/35‑1 (MQ=255) gacaggactgaagatttcgaaaactCTgctggctg > 1:3899591‑M1/26‑35 (MQ=255) gacaagactgaagctttcgaaaactCTgctggctg < 1:2475813‑M1/10‑1 (MQ=255) gacaagactgaagatttcgaaaactCTgctggctg < 1:18243772‑M1/10‑1 (MQ=255) gacaagactgaagatttcgaaaactCTgctggctg < 1:11814685‑M1/10‑1 (MQ=255) gacaagactgaagatttcgaaaactCTgctggctg > 1:15333603‑M1/26‑35 (MQ=255) gacaagactgaagatttcgaaaactCTgctggctg < 1:12812419‑M1/10‑1 (MQ=255) gacaagactgaagacttcgaaaactCTgctggctg < 1:15973394‑M1/10‑1 (MQ=255) ttCCAAAATCTGAACGTCCTGTTGCTGctggctgg < 1:6636380/35‑1 (MQ=255) acaatactgaagatttcgaaaactCTGctggctgg < 1:12195037‑M1/11‑1 (MQ=255) acaagactgaagatttcgaaaactCTGctggctgg < 1:8659950‑M1/11‑1 (MQ=255) acaagactgaagatttcgaaaactCTGctggctgg < 1:6886282‑M1/11‑1 (MQ=255) tCCAAAATCTGAACGTCCTGTTGCTGCTGGCTggg > 1:7681819/1‑35 (MQ=255) ccAAAATCTGAACGTCCTGTTGCTGCTGGCTgggg > 1:8516916/1‑34 (MQ=255) ccAAAATCTGAACGTCCTGTTGCTGCTGGCTGGGc < 1:4417159/35‑1 (MQ=255) aagactgaagatttcgaaaactCTGCTGGCtgggg < 1:18277884‑M1/13‑2 (MQ=255) aagactgaagatttcgaaaactCTGCTGGCtgggg < 1:14076015‑M1/13‑2 (MQ=255) aagactgaagatttcgaaaactCTGCTGGCtggga < 1:13042625‑M1/13‑2 (MQ=255) agactgaagatttcgaaaactCTGCTGGctggggg < 1:4682437‑M1/14‑3 (MQ=255) gactgaagatttcgaaaactCTGCTGgctggggtg < 1:7533890‑M1/15‑4 (MQ=255) aaaaTCTGAACGTCCTGTTGGTGCTGGCTGGGCgg < 1:4994792/35‑1 (MQ=255) aaaaTCTGAACGTCCTGTTGCTGCTGGCTGGGCgg < 1:9025778/35‑1 (MQ=255) actgaagatttcgaaaactCTGCTGGCTGGGAggg < 1:2795779‑M1/16‑1 (MQ=255) aaaTCTGAACGTCCTGTTGCTGCTGGCTGGGCgtg > 1:16396290/1‑33 (MQ=255) aaaTCTGAACGTCCTGTTGCTGCTGGCTGGGCggg < 1:17791496/35‑1 (MQ=255) aaaTCTGAACGTCCTGTTGCTGCTGGCTGGGCggg < 1:13509784/35‑1 (MQ=255) ctgaagatttcgaaaactCTGCTGGCTGGGGGGgt < 1:7036776‑M1/17‑1 (MQ=255) aaTCTGAACGTCCTGTTGCTGCTGGCTGGGCGGgt < 1:9700918/35‑1 (MQ=255) aaTCTGAACGTCCTGTTGCTGCTGGCTGGGCGGgt < 1:11194403/35‑1 (MQ=255) tgaagatttcgaaaactCTGCTGGCTGGGGGGgtg < 1:5795042‑M1/18‑1 (MQ=255) aTCTGAGCGTCCTGTTGCTGCTGGCTGGGCGGgtg < 1:829892/35‑1 (MQ=255) tcagAACGTCCTGTTGCTGCTGGCTGGGCGGgtgt < 1:18070570/32‑1 (MQ=255) cTGAACGTCCTGTTGCTTCTGGCTGGGCGGGGGTc > 1:15220966/1‑35 (MQ=37) ttaaCGTCCTGTTGCTGCTGGCTGGGGGGGGGTCg > 1:4145517/3‑35 (MQ=25) tGAACGTCCTGTTGCTGCTGTCTGGGGGGGGGTCg > 1:20043974/1‑35 (MQ=25) tGAACGTCCTGTTGCTGATGGCTGGGCGGGTGTCg < 1:16587295/35‑1 (MQ=255) gagcGTCCTGTTGCTGCTGGCTGGGCGGGTGTCgg < 1:28367/32‑1 (MQ=255) gAACGTCCTGTTGCTGCTGGCTGGGGGGGGGGCgg > 1:12705063/1‑35 (MQ=25) gAACGTCCTGTTGCTGCTGGCTGGGCGGGTGTCgg < 1:4875685/35‑1 (MQ=255) aaCGTCCTTTTGCTGCTGGCTGGGCGGGGGTCggg > 1:359453/1‑34 (MQ=37) aaCCTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGt < 1:3160056/35‑1 (MQ=255) cGTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGttt < 1:10481491/35‑1 (MQ=255) cGTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGttt < 1:15275348/35‑1 (MQ=255) gTCCTGTTGCTGCTGGCTGGGCGGGGGGCGGtgtt > 1:2189729/1‑35 (MQ=25) tCCTGTTGCTGCTGGCTGGGCGGGTGTCGGttttt < 1:12110906/35‑1 (MQ=255) tCCTGTTGCTGCTGGCTGGGCGGGTGTCGGttttt < 1:17337698/35‑1 (MQ=255) ccTGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTc < 1:6139480/35‑1 (MQ=255) ccTGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTc < 1:10055160/35‑1 (MQ=255) tGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTCTa < 1:19609808/35‑1 (MQ=255) tgctgcTGGCTGGGCGGGTGTCGGTTTTTCTATCg < 1:4348893/35‑1 (MQ=255) gctgctGGCTGGGCGGGTGTCGGTTTTTCTATCgg < 1:9492149/35‑1 (MQ=255) CTGCTGGCTGGGCGGGTGTCGGTTTTTCTATCGGt > 1:11435585‑M1/1‑35 (MQ=255) CTGCTGGCTGGGCGGGTGTCGGTTTTTCTATCGGt > 1:4115731‑M1/1‑35 (MQ=255) CTGCTGGCTGGGCGGGTGTCGGTTTTTCTATCGGt > 1:10180248‑M1/1‑35 (MQ=255) | GGTGAGTGGTTTCCAAAATCTGAACGTCCTGTTGCTGCTGGCTGGGCGGGTGTCGGTTTTTCTATCGGT > REL606/3780437‑3780505 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |