New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 615035 | 53 (0.520) | 4 (0.050) | 3/38 | NT | 7.4% | coding (157/198 nt) | ybdD | hypothetical protein |
? | REL606 | = 3625455 | 58 (0.710) | pseudogene (8/738 nt) | yhjQ | b3534; cell division protein (chromosome partitioning ATPase) |
CGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/614997‑615035 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggGGGGGCGGGGAGGCGTGGGGACAACAACCATCAC < REL606/3625455‑3625422 CGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGG > 1:11153215/1‑35 CGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGG < 1:12111530/35‑1 CGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGG > 1:7813947/1‑35 CGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGG > 1:16994975/1‑35 CGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGG < 1:20551990/35‑1 GCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGC < 1:965671/35‑1 GCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGC > 1:7533776/1‑35 CCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCA < 1:7190607/35‑1 CCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCA > 1:12946209/1‑35 CCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCA > 1:16245668/1‑35 CCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCA > 1:19146576/1‑35 CCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCA > 1:16174960/1‑35 CGATTACCTACGAAGAGTTTTTCCGTGAGCGGCAG > 1:18109074/1‑35 CGATGACCTACGAAGAGTTTTTCCGTGAGCGTCAG > 1:17434425/1‑35 CGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAG < 1:13001202/35‑1 CGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAG > 1:15742488/1‑35 GATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGG < 1:1941949/35‑1 GATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGG > 1:5756860/1‑35 GATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGG < 1:6590694/35‑1 GATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGG > 1:9859731/1‑35 ATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGG > 1:10182038/1‑35 ATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGG > 1:2161037/1‑35 ATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGG > 1:12809703/1‑35 ATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGG > 1:12887718/1‑35 TGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGGG > 1:16848837/1‑35 TGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGGG > 1:13629208/1‑35 GACCTACGAAGAGTTTTTCCGTGAGCGGCAGGGcg > 1:19988520/1‑33 GACCTACGAAGAGTTTTTCCGTGAGCGGCAGGGGG > 1:8186072/1‑35 GACCTACGAAGAGTTTTTCCGTGAGCGGCAGGGGG > 1:15546750/1‑35 GACCTACGAAGAGTTTTTCCGTGAGCGGCAGGGGG > 1:3838761/1‑35 ACCTACGAAGAGTTTTTCCGTGAGCGGCAGGGGGc > 1:13614807/1‑34 ACCTACGAAGAGTTTTTCCGTGAGCGGCAGGGGGG > 1:8050182/1‑35 ACCTACGAAGAGTTTTTCCGTGAGCGGCAGGGGGG > 1:12412810/1‑35 ACCTACGAAGAGTTTTTCCGTGAGCGGCAGGGGGG > 1:2966051/1‑35 ACCTACGAAGAGTTTTTCCGTGAGCGGCAGGGGGG > 1:17514414/1‑35 CCTACGAAGAGTTTTTCCGTGAGCGGCAGGGGGGG > 1:7116218/1‑35 CCTACGAAGAGTTTTTCCGTGAGCGGCAGGGGGGG > 1:12728805/1‑35 TACGAAGAGTTTTTCCGTGAGCGGCAGGGGGGGgg > 1:10534309/1‑33 TACGAAGAGTTTTTCCGTGAGCGGCAGGGGGGGCG > 1:13561984/1‑35 CGAAGAGTTTTTCCGTGAGCGGCAGGGGGGGCGGG > 1:6788090/1‑35 GAAGAGTTTTTCCGTGAGCGGCAGGGGGGGCGGGG > 1:1813478/1‑35 GAAGAGTTTTTCCGTGAGCGGCAGGGGGGGCGCGG > 1:2797304/1‑35 GGGGGGCGGGGAGGCGTGGGGACAACAACCATCAC > 1:6703790/1‑35 CGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/614997‑615035 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggGGGGGCGGGGAGGCGTGGGGACAACAACCATCAC < REL606/3625455‑3625422 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |