Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 1,462,320 IS150 (–) +3 bp 90.4% intergenic (‑82/‑257) mokB ← / → trg regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 664688 =NA (NA)66 (0.700) 36/44 NT 89.1% noncoding (1/1443 nt) IS150 repeat region
?REL606 1462320 = 7 (0.090)intergenic (‑82/‑259) mokB/trg regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor
* ? REL606 = 666130NA (NA)66 (0.640) 36/48 NT 89.2% noncoding (1443/1443 nt) IS150 repeat region
?REL606 = 1462322 7 (0.080)intergenic (‑84/‑257) mokB/trg regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor

TTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/666101‑666130
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTGAGACTTTCTGTTTTCAGGCTAACCGGGAA  <  REL606/1462322‑1462289
                                                                
TTAACTGTCCAACTTTTTGGGGTCAGTACAGCCTG                               >  1:17364076/1‑35
TTAACTGTCCAACTTTTTGGGGTCAGTACAGCCTG                               <  1:6902482/35‑1
 TAACTGTCCAACTTTTTGGGGTCAGTACAGCCTGA                              >  1:8012463/1‑35
  AACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAG                             >  1:1751684/1‑35
  AACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAG                             <  1:15124280/35‑1
  AACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAG                             >  1:2796319/1‑35
  AACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAG                             <  1:12983181/35‑1
  AACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAG                             >  1:8950097/1‑35
   ACTGTCCAACTTTTTGGGGTCAGTACAGCCTGtac                            >  1:18323231/1‑32
   ACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGA                            >  1:16114634/1‑35
   ACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGA                            >  1:6249850/1‑35
   ACTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGA                            <  1:13492575/35‑1
    CTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGAC                           >  1:4789864/1‑35
    CTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGAC                           >  1:4622464/1‑35
    CTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGAC                           >  1:17137129/1‑35
    CTGTCCAACTTTTTGGGGTCAGTACAGCCTGAGAC                           >  1:10549262/1‑35
     TGTCCAACTTTTTGGGGTCAGTACAGCCTGAGACT                          <  1:19517273/35‑1
      GTCCAACTTTTTGGGGTCAGTACAGCCTGAGACTT                         >  1:4429264/1‑35
       TCCAACTTTTTGGGGTCAGTACAGCCTGAGACTTT                        >  1:1089536/1‑35
        CCAACTTTTTGGGGTCAGTACAGCCTGAGACTTTC                       >  1:18254823/1‑35
         CAACTTTTTGGGGTCAGTACAGCCTGAGACTTTCT                      <  1:8122445/35‑1
         CAACTTTTTGGGGTCAGTACAGCCTGAGACTTTCT                      >  1:2620828/1‑35
          AACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTG                     <  1:3622905/35‑1
          AACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTG                     >  1:7470145/1‑35
          AACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTG                     <  1:6698964/35‑1
          AACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTG                     >  1:10256600/1‑35
          AACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTG                     <  1:1039226/35‑1
           ACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTGT                    <  1:19015016/35‑1
           ACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTGT                    >  1:9433495/1‑35
           ACTTTTTGGGGTCAGTACAGCCTGAGACTTTCTGT                    >  1:7262022/1‑35
            CTTTTTTGGGTCAGTACAGCCTGAGACTTTCTGTT                   >  1:1900911/1‑35
            CTTTTTGGGGTCAGTACAGCCTGAGACTTTCTGTT                   >  1:4304577/1‑35
            CTTTTTGGGGTAAGTACAGCCTGAGACTTTCTGTT                   <  1:11380815/35‑1
             TTTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTT                  >  1:15740983/1‑35
             TTTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTT                  >  1:7034549/1‑35
             TTTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTT                  >  1:18420636/1‑35
             TTTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTT                  >  1:7659166/1‑35
              TTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTTT                 >  1:11853964/1‑35
              TTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTTT                 >  1:582742/1‑35
              TTTTGGGGTCAGTACAGCCTGAGACTTTCTGTTTT                 >  1:13670207/1‑35
               TTTGGGGTCAGTACAGCCTGAGACTTTCTGTTTTC                <  1:10923099/35‑1
               TTTGGGGTCAGTACAGCCTGAGACTTTCTGTTTTC                >  1:7584787/1‑35
               TTTGGGGTCAGTACAGCCTGAGACTTTCTGTTTTC                <  1:4007113/35‑1
                TTGGGGTCAGTCCAGCCTGAGACTTTCTGTTTTCA               <  1:20105891/35‑1
                TTGGGGTCAGTACAGCCTGAGACTTTCTGTTTTCA               >  1:20447827/1‑35
                TTGGGGTCAGTACAGCCTGAGACTTTCTGTTTTCA               <  1:5620567/35‑1
                TTGGGGTCAGTACAGCCTGAGACTTTCTGTTTTCA               >  1:1392625/1‑35
                 TGGGGTCAGTCCAGCCTGAGACTTTCTGTTTTCAG              <  1:10586241/35‑1
                 TGGGGTCAGTACAGCCTGAGACTTTCTGTTTTCAG              <  1:8587080/35‑1
                  GGGGTCAGTACAGCCTGAGACTTTCTGTTTTCAGG             <  1:7989826/35‑1
                   GGGTCAGTACAGCCTGAGACTTTCTGTTTTCAGGC            >  1:15212178/1‑35
                   GGGTCAGTACAGCCTGAGACTTTCTGTTTTCAGGC            >  1:1582814/1‑35
                   GGGTCAGTACAGCCTGAGACTTTCTGTTTTCAGGC            <  1:12248921/35‑1
                    GGTCAGTACAGCCTGAGACTTTCTGTTTTCAGGCT           <  1:12100877/35‑1
                    GGTCAGTACAGCCTGAGACTTTCTGTTTTCAGGCT           >  1:13641923/1‑35
                    GGTCAGTACAGCCTGAGACTTTCTGTTTTCAGGCT           <  1:8321794/35‑1
                     GTCAGTACAGCCTGAGACTTTCTGTTTTTAGGCTA          >  1:512217/1‑35
                     GTCAGTACAGCCTGAGACTTTCTGTTTTCAGGCTA          >  1:4809770/1‑35
                     GTCAGTACAGCCTGAGACTTTCTGTTTTCAGGCTA          >  1:4829149/1‑35
                      TCAGTACAGCCTGAGACTTTCTGTTTTCAGGCTAA         <  1:3111534/35‑1
                      TCAGTACAGCCTGAGACTTTCTGTTTTCAGGCTAA         >  1:5798230/1‑35
                      TCAGTACAGCCTGAGACTTTCTGGTTTCAGGCTAA         >  1:17514435/1‑35
                       CAGTCCAGCCTGAGACTTTCTGTTTTCAGGCTAAC        <  1:9088450/35‑1
                       CAGTCCAGCCTGAGACTTTCTGTTTTCAGGCTAAC        <  1:17947399/35‑1
                       CAGTACAGCCTGAGACTTTCTGTTTTCAGTCTAAC        >  1:5030234/1‑35
                       CAGTACAGCCTGAGACTTTCTGTTTTCAGGCTAAC        <  1:9128899/35‑1
                       CAGTACAGCCTGAGACTTTCTGTTTTCAGGCTAAC        >  1:5397104/1‑35
                        atTACAGCCTGAGACTTTCTGTTTTCAGGCTAACC       <  1:15965247/33‑1
                        AGTCCAGCCTGAGACTTTCTGTTTTCAGGCTAACC       <  1:18869807/35‑1
                        AGTCCAGCCTGAGACTTTCTGTTTTCAGGCTAACC       <  1:2870121/35‑1
                          TACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGG     >  1:1151050/1‑35
                          TACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGG     <  1:19392253/35‑1
                          TACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGG     >  1:13659137/1‑35
                           ACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGG    >  1:1576143/1‑35
                           ACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGG    <  1:3527717/35‑1
                           ACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGG    >  1:16783535/1‑35
                           ACAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGG    <  1:2334417/35‑1
                            CAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGGA   <  1:9499400/35‑1
                            CAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGGA   <  1:19785828/35‑1
                            CAGCCTGAGACTTTCTGTTTTCAGGCTAACCGGGA   <  1:14278990/35‑1
                            CAGCCTGAGACTTTCTGTTTCCAGGCTAACCGGGA   >  1:16876393/1‑35
                             AGCCTGAGACTTTCTGTTTTCAGGCTAACCGGGAA  >  1:12042593/1‑35
                                                                
TTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/666101‑666130
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTGAGACTTTCTGTTTTCAGGCTAACCGGGAA  <  REL606/1462322‑1462289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.