New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3826321 = | 43 (0.420) | 5 (0.060) | 3/42 | NT | 9.5% | coding (314/1662 nt) | yidE | hypothetical protein |
? | REL606 | = 3885956 | 58 (0.650) | coding (39/1890 nt) | gidA | glucose‑inhibited division protein A |
Only 100 of 102 total aligned reads displayed.
ATCAAACAGTTTATGCAGGATGGCGGT‑AACCAGACCACCGATGATGACGATCAGAACAGCAAACAGGTT > REL606/3826287‑3826355 | atCAAACAGTTTATGCAGGATGGCGGT‑AACCAGac < 1:14483707/35‑1 (MQ=255) atCAAACAGTTTATGCAGGATGGCGGG‑AAACAGac > 1:2006619/1‑35 (MQ=25) tCAACCAGTTTATGCAGGATGGCGGT‑AACCAGacc < 1:3855975/35‑1 (MQ=255) tCAAACAGTTTATGCAGGATGGCGGT‑AACCAGacc < 1:12821681/35‑1 (MQ=255) tCAAACAGTTTATGCAGGATGGCGGG‑AAACAAacc > 1:5747611/1‑35 (MQ=21) tCAAACAGTTTATGCAGGATGGCGGG‑AAACAAaca > 1:2700507/1‑34 (MQ=21) ggccatcgcggcctcggtgcctgcatgacccccgc < 1:8733523‑M1/1‑1 (MQ=255) ggccatcgcggcctcggtgccggcatgacccccgc > 1:39411‑M1/35‑35 (MQ=255) gccatcgcggcctcggtgcctgcatgacccccgcc > 1:4368942‑M1/34‑35 (MQ=255) cAAACAGTTTATGCAGGATGGCGGTGAACCAAacc > 1:15401810/1‑35 (MQ=21) cAAACAGTTTATGCAGGATGGCGGT‑AACCAGacca < 1:14061573/35‑1 (MQ=255) cAAACAGTTTATGCAGGATGGCGGG‑GAACAGacca > 1:359312/1‑35 (MQ=21) cAAACAGTTTATGCAGGATGGCGGG‑GAACAGacca > 1:8965995/1‑35 (MQ=21) ccttcgcggcctcggtgcctgcatgacccccgCCa > 1:5020117‑M1/33‑35 (MQ=255) ccatcgcggcctcggtgcctgcatgacccccgCCa < 1:14863452‑M1/3‑1 (MQ=255) ccatcgcggcctcggtgcatgcatgacccccgCCa > 1:19313459‑M1/33‑35 (MQ=255) ccagcgcggcctcggtgcctgcatgacccccgCCa > 1:16688094‑M1/33‑35 (MQ=255) aaaCAGTTTATGCAGGATGGCGGT‑AACCAGaccan < 1:4871005/35‑1 (MQ=255) aaaCAGTTTATGCAGGATGGCGGT‑AACCAGaccac < 1:3043617/35‑1 (MQ=255) aaaCAGTTTATGCAGGATGGCGGT‑AACCAGaccac < 1:12092337/35‑1 (MQ=255) aaaCAGTTTATGCAGGATGGCGGT‑AACCAGaccac < 1:9048062/35‑1 (MQ=255) aaaCAGTTTATGCAGGATGGCGGT‑AACCAGaccac < 1:16726092/35‑1 (MQ=255) aaaCAGTTTATGCAGGATGGCGGT‑AACCAGacaac < 1:11570961/35‑1 (MQ=255) aaCAGTTTATGCAGGATGGCGGT‑AACCAGaccacc < 1:15952868/35‑1 (MQ=255) aaCAGTTTATGCAGGATGGCGGG‑AAACAGaacacc > 1:13473594/1‑35 (MQ=21) aaCAGTTTATGCAGGATGGCGGG‑AAACAGaacacc > 1:9573793/1‑35 (MQ=21) cAGTTTATGCAGGATGGCGGG‑AACCAGACCCCCga > 1:7136630/1‑35 (MQ=25) cAGTTTATGCAGGATGGCGGG‑AAACCGaacaccca > 1:19952160/1‑33 (MQ=12) cAGTTTATGCAGGATGGCGGG‑AAACAGaccacccc > 1:7067550/1‑33 (MQ=25) aGTTTATGCAGGATGGCGGG‑AAACAAaccacccac > 1:3647583/1‑32 (MQ=16) aTGCAGGATGGCGGG‑AAACAGACCACCGAtgatga > 1:11956901/1‑35 (MQ=37) tGCAGGATGGCGGT‑AACCAGACCACAGATGATGAc < 1:10926860/35‑1 (MQ=255) gATGGCGGT‑AACCA‑CCCCCCGATGATGACGATCAg < 1:4430647/35‑1 (MQ=25) gctgT‑AACCAGACCACCGATGATGACGATCAGAAc > 1:5190266/4‑35 (MQ=255) gCGGT‑AACCATACCACCGATGATGACGATCAGAAc > 1:18445639/1‑35 (MQ=255) gCGGT‑AACCAGACCACCGATGATGACGATCAGAAc > 1:5989055/1‑35 (MQ=255) gCGGT‑AACCAGACCACCGATGATGACGATCAGAAc > 1:2722714/1‑35 (MQ=255) gCGGT‑AACCAGACCACCGATGATGACGATCAGAAc > 1:18963700/1‑35 (MQ=255) gCGGT‑AACCAGACCACCGATGATGACGATCAGAAc > 1:19293175/1‑35 (MQ=255) cGGT‑AACCAGACCACCGATGATGACGATCAGAACa > 1:17568508/1‑35 (MQ=255) cGGT‑AACCAGACCACCGATGATGACGATCAGAACa > 1:9442187/1‑35 (MQ=255) cGGT‑AACCAGACCACCGATGATGACGATCAGAACa > 1:17806576/1‑35 (MQ=255) cGGT‑AACCAGACCACCGATGATGACGATCAGAACa > 1:17823029/1‑35 (MQ=255) cGGT‑AACCAGACCACCGATGATGACGATCAGAACa > 1:17983610/1‑35 (MQ=255) cGGT‑AACCAGACCACCGATGATGACGATCAGAACa > 1:2085443/1‑35 (MQ=255) cGGT‑AACCAGACCACCGATGATGACGATCAGAACa > 1:7534049/1‑35 (MQ=255) cGGT‑AACCAGACCACCGATGATGACGATCAGAACa > 1:14407196/1‑35 (MQ=255) ggT‑AACCAGACCACCTATGATGACGATCAGAACAg > 1:4173886/1‑35 (MQ=255) ggT‑AACCAGACCACCGATGATGACGATCAGAACAg > 1:4906009/1‑35 (MQ=255) ggT‑AACCAGACCACCGATGATGACGATCAGAACAg > 1:4721151/1‑35 (MQ=255) ggT‑AACCAGACCACCGATGATGACGATCAGAACAg > 1:18367447/1‑35 (MQ=255) ggT‑AACCAGACCACCGATGATGACGATCAGAACAg > 1:16354792/1‑35 (MQ=255) ggT‑AACCAGACCACCGATGATGACGATCAGAACAg > 1:5547525/1‑35 (MQ=255) att‑AACCACCCCACCGATGATGACGATCAGAACAg < 1:5761895/33‑1 (MQ=25) gT‑AACCAGACCACCGATGATGACGATCAGAACAGc > 1:20005724/1‑35 (MQ=255) gT‑AACCAGACCACCGATGATGACGATCAGAACAGc > 1:10021739/1‑35 (MQ=255) gT‑AACCAGACCACCGATGATGACGATCAGAACAGc > 1:17165299/1‑35 (MQ=255) gT‑AACCAGACCACCGATGATGACGATCAGAACAGc > 1:13679605/1‑35 (MQ=255) gT‑AACCAGACCACCGATGATGACGATCAGAACAGc > 1:11368268/1‑35 (MQ=255) t‑AACCAGACCACCGATGATGACGATCAGAACAGCa > 1:15368871/1‑35 (MQ=255) t‑AACCAGACCACCGATGATGACGATCAGAACAGCa > 1:15386378/1‑35 (MQ=255) t‑AACCAGACCACCGATGATGACGATCAGAACAGCa > 1:18861304/1‑35 (MQ=255) t‑AACCAGACCACCGATGATGACGATCAGAACAGCa > 1:20311865/1‑35 (MQ=255) nacccAGCCCACCGATGATGACGATCAGAACAGCa < 1:7233480/32‑1 (MQ=37) gaccccccCCACCGATGATGACGATCAGAACAGCa > 1:7885463‑M1/9‑35 (MQ=255) cccccccCCACCGATGATGACGATCAGAACAGCaa > 1:752571‑M1/8‑35 (MQ=255) accccccCCACCGATGATGACGATCAGAACAGCaa > 1:7376010‑M1/8‑35 (MQ=255) aaCCAGACCACCGATGATGACGATCAGAACAGCaa > 1:7349139/1‑35 (MQ=255) aaCCAGACCACCGATGATGACGATCAGAACAGCaa > 1:1743635/1‑35 (MQ=255) aaCCAGACCACCGATGATGACGATCAGAACAGCaa > 1:11045295/1‑35 (MQ=255) aaCCAGACCACCGATGATGACGATCAGAACAGCaa > 1:19623450/1‑35 (MQ=255) ccccccCCACCGATGATGACGATCAGAACAGCaaa > 1:12042794‑M1/7‑35 (MQ=255) ccccccCCACCGATGATGACGATCAGAACAGCaaa > 1:13702779‑M1/7‑35 (MQ=255) aCCAGACCACCGATGATGACGATCAGAACAGCaaa > 1:14787423/1‑35 (MQ=255) aCCAGACCACCGATGATGACGATCAGAACAGCaaa > 1:14023970/1‑35 (MQ=255) aCCAGACCACCGATGATGACGATCAGAACAGCaaa > 1:1780281/1‑35 (MQ=255) aCCAGACCACCGATGATGACGATCAGAACAGCaaa > 1:5064400/1‑35 (MQ=255) cccccCCACCGATGATGACGATCAGAACAGCAAAc > 1:18638028‑M1/6‑35 (MQ=255) ccAGACCACCGATGATGACGATCAGAACAGCAAAc > 1:4441170/1‑35 (MQ=255) ccAGACCACCGATGATGACGATCAGAACAGCAAAc > 1:11065432/1‑35 (MQ=255) ccAGACCACCGATGATGACGATCAGAACAGCAAAc > 1:11171334/1‑35 (MQ=255) ccAGACCACCGATGATGACGATCAGAACAGCAAAc > 1:19455801/1‑35 (MQ=255) ccAGACCACCGATGATGACGATCAGAACAGCAAAc > 1:12844067/1‑35 (MQ=255) naGACCACCGATGATGACGATCAGAACAGCAAACa > 1:3490755/2‑35 (MQ=255) cccCCACCGATGATGACGATCAGAACAGCAAACAg > 1:6782207‑M1/4‑35 (MQ=255) cccCCACCGATGATGACGATCAGAACAGCAAACAg > 1:2400438‑M1/4‑35 (MQ=255) cccCCACCGATGATGACGATCAGAACAGCAAACAg > 1:11309648‑M1/4‑35 (MQ=255) cccCCACCGATGATGACGATCAGAACAGCAAACAg > 1:19525106‑M1/4‑35 (MQ=255) aGACCACCGATGATGACGATCAGAACAGCAAACAg > 1:18913673/1‑35 (MQ=255) aGACCACCGATGATGACGATCAGAACAGCAAACAg > 1:13677191/1‑35 (MQ=255) aGACCACCGATGATGACGATCAGAACAGCAAACAg > 1:11133074/1‑35 (MQ=255) aGACCACCGATGATGACGATCAGAACAGCAAACAg > 1:19718470/1‑35 (MQ=255) gACCACCGATGATGACGATCAGAACAGCAAACAgg > 1:11394990/1‑35 (MQ=255) gACCACCGATGATGACGATCAGAACAGCAAACAgg > 1:11818035/1‑35 (MQ=255) ccCCACCGATGATGACGATCAGAACAGCAAACAgg > 1:7139689‑M1/3‑35 (MQ=255) cCCACCGATGATGACGATCAGAACAGCAAACAGGt > 1:14881051‑M1/2‑35 (MQ=255) accaccGATGATGACGATCAGAACAGCAAACAGGt > 1:3423727/1‑35 (MQ=255) accaccGATGATGACGATCAGAACAGCAAACAGGt > 1:7488035/1‑35 (MQ=255) accaccGATGATGACGATCAGAACAGCAAACAGGt > 1:18315577/1‑35 (MQ=255) CCACCGATGATGACGATCAGAACAGCAAACAGGtt < 1:19494423‑M1/35‑1 (MQ=255) | ATCAAACAGTTTATGCAGGATGGCGGT‑AACCAGACCACCGATGATGACGATCAGAACAGCAAACAGGTT > REL606/3826287‑3826355 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |