Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 4,110,237 | IS150 (–) +3 bp | 100% | coding (296‑298/2433 nt) | metL → | bifunctional aspartate kinase II/homoserine dehydrogenase II |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3893554 = | NA (NA) | 139 (1.480) | 43/44 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 4110237 = | 0 (0.000) | coding (296/2433 nt) | metL | bifunctional aspartate kinase II/homoserine dehydrogenase II | |||||
* | ? | REL606 | = 3894996 | NA (NA) | 79 (0.770) | 28/48 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 4110239 | 0 (0.000) | coding (298/2433 nt) | metL | bifunctional aspartate kinase II/homoserine dehydrogenase II |
Only 100 of 146 total aligned reads displayed.
AACTGGGTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATG > REL606/3893520‑3893586 | aaCTGGGTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACt > 1:13942699/1‑35 (MQ=255) aaCTGGGTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACt < 1:12547314/35‑1 (MQ=255) aaCTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTg > 1:3574833/1‑35 (MQ=37) aaCTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTg < 1:4453475/35‑1 (MQ=37) aaCTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTg > 1:8703401/1‑35 (MQ=37) aCTGGGTACTCAGTTCGAAATCTAACGCC‑‑A‑‑GACTg > 1:5880668/1‑35 (MQ=255) aCTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGt > 1:6001015/1‑35 (MQ=37) aCTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGt > 1:3397272/1‑35 (MQ=37) aCTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGt > 1:10403113/1‑35 (MQ=37) cTGGGTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGt > 1:2506492/1‑35 (MQ=255) cTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTa < 1:16408655/35‑1 (MQ=37) cTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTa > 1:43534/1‑35 (MQ=37) cTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTa > 1:387057/1‑35 (MQ=37) cTGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTa > 1:8872603/1‑35 (MQ=37) tGGGTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTa < 1:17032937/35‑1 (MQ=255) tGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTAc > 1:7079601/1‑35 (MQ=38) tGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTAc > 1:407990/1‑35 (MQ=38) tGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTAc < 1:1877561/35‑1 (MQ=38) tGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTAc > 1:12404993/1‑35 (MQ=38) tGGGTACTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTAc > 1:7838440/1‑35 (MQ=38) gggTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTAc < 1:12590829/35‑1 (MQ=255) gggTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTAc < 1:3814987/35‑1 (MQ=255) gggTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTAc < 1:2327570/35‑1 (MQ=255) ggTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACt < 1:4809957/35‑1 (MQ=255) ggTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACt < 1:17311730/35‑1 (MQ=255) ggTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACt < 1:14041386/35‑1 (MQ=255) gTACTCATGTCGAAATCTAACGCC‑‑‑‑‑GACTGTACTGc > 1:10712625/1‑35 (MQ=37) gTACTCAGGTCGAAATCTAACGCC‑‑AG‑GACTGTACt > 1:1687942/1‑35 (MQ=37) gTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTg < 1:7954058/35‑1 (MQ=255) tACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGc > 1:13813666/1‑35 (MQ=255) aCTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCa < 1:17349458/35‑1 (MQ=255) aCTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCa > 1:15360774/1‑35 (MQ=255) aCTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTACTGCAc < 1:2493460/35‑1 (MQ=38) aCTCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTACTGCAc > 1:14951548/1‑35 (MQ=38) cTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCAc > 1:12056090/1‑35 (MQ=255) cTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCAc < 1:10172757/35‑1 (MQ=255) cTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCAc < 1:17770085/35‑1 (MQ=255) cTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCAc < 1:13449550/35‑1 (MQ=255) tCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCAcc < 1:13422155/35‑1 (MQ=255) tCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTACTGCAccc < 1:20604119/35‑1 (MQ=38) tCAGGTCGAAATCTAACGCC‑‑‑‑‑GACTGTACTGCAccc > 1:9276157/1‑35 (MQ=38) aGGTCGAAATCTAACGCC‑‑AG‑GACTGTACTGCActc > 1:5969988/1‑33 (MQ=25) ggTCGAAATCTAACGCC‑‑AGGGACTGTACTGCAccc < 1:2156930/35‑1 (MQ=25) ggTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAt < 1:811712/35‑1 (MQ=255) gTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAtt > 1:11448860/1‑35 (MQ=255) gTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAtt > 1:18337572/1‑35 (MQ=255) gTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAtt < 1:3058667/35‑1 (MQ=255) tCGAAATCTAACGCC‑‑‑‑‑GACTGTACTGCACCCAtttt > 1:7868169/1‑35 (MQ=25) tCGAAATCTAACGCC‑‑‑‑‑GACTGTACTGCACCCAtttt > 1:12577838/1‑35 (MQ=25) cGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAtttt > 1:19607082/1‑35 (MQ=255) cGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAtttt < 1:12837366/35‑1 (MQ=255) cGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCAtttt > 1:6247719/1‑35 (MQ=255) cGAAATCTAACG‑C‑‑A‑‑GACTGTACTGCACCCATTttg < 1:6078691/35‑1 (MQ=25) gAAATCTAACGCCAGA‑‑GACTGTACTGCACCCAttt < 1:15502501/35‑1 (MQ=18) gAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTttg > 1:7463737/1‑35 (MQ=255) gAAATCTAACGCC‑‑‑‑‑GACTGTACTGCACCCATTttgt < 1:12325836/35‑1 (MQ=21) aaaTCTAACGCC‑‑AG‑GACTGTACTGCACCCATTttg > 1:9317411/1‑35 (MQ=21) aaaTCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTttgt > 1:4927337/1‑35 (MQ=255) aaaTCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTttgt > 1:3448004/1‑35 (MQ=255) aaTCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTttgtt > 1:9832759/1‑35 (MQ=255) aTCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTttgttg > 1:12575127/1‑35 (MQ=255) tCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTgg > 1:10230123/1‑35 (MQ=255) tCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTgg > 1:8016303/1‑35 (MQ=255) tCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTgg > 1:241903/1‑35 (MQ=255) tCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTgg > 1:19676540/1‑35 (MQ=255) cTAACGCC‑‑A‑‑GACTGTACTTCACCCATTTTGTTggc > 1:6462770/1‑34 (MQ=255) cTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGa < 1:9375308/35‑1 (MQ=255) cTAACGCC‑‑‑‑‑GACTGTACTGCACCCATTTTGTTGGAc < 1:5101731/35‑1 (MQ=17) cTAACGCC‑‑‑‑‑GACTGTACTGCACCCATTTTGTTGGAc < 1:3646778/35‑1 (MQ=17) tAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTGGGAc < 1:10046849/35‑1 (MQ=255) aaCGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACg > 1:11718126/1‑35 (MQ=255) aaCGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACg > 1:15502888/1‑35 (MQ=255) aaCGCC‑‑A‑‑GACTGTACGGCACCCATTTTGTTGGACg > 1:11160342/1‑35 (MQ=255) aaCGCC‑‑‑‑‑GACTGTACTGCACCCATTTTGTTGGACGa > 1:7885979/1‑35 (MQ=14) aCGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGa > 1:678807/1‑35 (MQ=255) aCGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGa > 1:7307590/1‑35 (MQ=255) cGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGAt > 1:19050878/1‑35 (MQ=255) cGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGAt < 1:7521486/35‑1 (MQ=255) cc‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGa > 1:11225130/1‑35 (MQ=255) cc‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGa > 1:11600026/1‑35 (MQ=255) cc‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGa < 1:13220283/35‑1 (MQ=255) c‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGaa > 1:18691505/1‑35 (MQ=40) c‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGaa > 1:3007875/1‑35 (MQ=40) gccgACTGTACTGCACCCATTTTGTTGGACGATGa < 1:11701875/32‑1 (MQ=255) gccgACTGTACTGCACCCATTTTGTTGGACGATGa > 1:19070967/4‑35 (MQ=255) cccgACTGTACTGCACCCATTTTGTTGGACGATGa < 1:11748627/32‑1 (MQ=255) a‑‑GACTGTACTGCACCCATTTTGTTGGACGATGaaa > 1:12036791/1‑35 (MQ=38) a‑‑GACTGTACTGCACCCATTTTGTTGGACGATGaaa > 1:514955/1‑35 (MQ=38) ccgACTGTACTGCACCCATTTTGTTGGACGATGaa > 1:18274383/3‑35 (MQ=25) cgACTGTACTGCACCCATTTTGTTGGACGATGaaa > 1:3903288/2‑35 (MQ=25) cgACTGTACTGCACCCATTTTGTTGGACGATGaaa < 1:1657623/34‑1 (MQ=25) aaaCTGTACTGCACCCATTTTGTTGGACGATGaaa > 1:8413227/3‑35 (MQ=17) gACTGTACTGCACCCATTTTGTTGGACGATGAAAt < 1:14295949/35‑1 (MQ=35) gACTGTACTGCACCCATTTTGTTGGACGATGAAAt > 1:15295427/1‑35 (MQ=35) gACTGTACTGCACCCATTTTGTTGGACGATGAAAt > 1:4768112/1‑35 (MQ=35) gACTGTACTGCACACATTTTGTTGGACGATGAAAt < 1:5519752/35‑1 (MQ=255) aCTGTACTGCACCCATTTTGTTGGACGATGAAATg > 1:3816741/1‑35 (MQ=32) aCTGTACTGCACCCATTTTGTTGGACGATGAAATg > 1:2436271/1‑35 (MQ=32) aCTGTACTGCACCCATTTTGTTGGACGATGAAATg > 1:7309178/1‑35 (MQ=32) aCTGTACTGCACCCATTTTGTTGGACGATGAAATg > 1:6324007/1‑35 (MQ=32) | AACTGGGTACTCAGGTCGAAATCTAACGCC‑‑A‑‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATG > REL606/3893520‑3893586 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |