New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1076256 | 103 (1.000) | 12 (0.160) | 3/36 | NT | 15.1% | coding (711/2547 nt) | torA | trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit |
? | REL606 | 3800450 = | 58 (0.750) | intergenic (+10/+31) | ECB_03545/yicM | hypothetical protein/predicted transporter |
Only 100 of 150 total aligned reads displayed.
TAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAG > REL606/3800416‑3800484 | tAAGGTAGAATGCCCTGATATGTAAGAACAGcaac > 1:17468968/1‑35 (MQ=255) aGGTAGAATGCCCGGATATGTAAGAACAGcaacaa > 1:15607447/1‑35 (MQ=255) aGGTAGAATGCCCGGATATGTAAGAACAGcaacaa > 1:6892808/1‑35 (MQ=255) gTAGAATGCCCGGATATGTAAGAACAGCAACAact > 1:11389439/1‑35 (MQ=255) gTAGAATGCCCGGATATGTAAGAACAGCAAAAact < 1:15663155/35‑1 (MQ=255) aGAATGCCCGGATATGTAAGAACAGCAACAactac > 1:19642186/1‑35 (MQ=255) aGAATGCCCGGATATGTAAGAACAGCAACAactac > 1:4862506/1‑35 (MQ=255) aGAATGCCCGGATATGTAAGAACAGCAACAactac > 1:378683/1‑35 (MQ=255) naaTGCCCGGATATGTAAGAACAGCAACAactact > 1:4795952/2‑35 (MQ=255) gAATGCCCGGATATGTAAGAACAGCAACAactact > 1:3390992/1‑35 (MQ=255) aaTGCCCGGATATGTAAGAACAGCAACAACTACTg > 1:18257101/1‑35 (MQ=255) aTGCCCGGATATGTAAGAACAGCAACGACTACTGa > 1:2056948/1‑35 (MQ=255) tGCCCGGATATGTAAGAACAGCAACAACTACTGAc > 1:3242783/1‑35 (MQ=255) gCCCGGATATGTAAGAACAGCAACAACTACTGAcc > 1:14457383/1‑35 (MQ=255) cccGGATATGTAAGAACAGCAACAACTACTGACCa > 1:13900358/1‑35 (MQ=255) cccGGATATGTAAGAACAGCAACAACTACTGACCa > 1:9325588/1‑35 (MQ=255) cccGGATATGTAAGAACAGCAACAACTACTGACCa > 1:16380404/1‑35 (MQ=255) ccGGATATGTAAGAACAGCAACAACTACTGACCaa > 1:784046/1‑35 (MQ=255) ccGGATATGTAAGAACAGCAACAACTACTGACCaa > 1:4734502/1‑35 (MQ=255) ccGGATATGTAAGAACAGCAACAACTACTGACCaa > 1:19907793/1‑35 (MQ=255) gggATATGAAAAACCAGCAACAACTACTGACCAAc < 1:17278993/34‑1 (MQ=21) cGGATATGTAAGAACAGCAACAACTACTGACCAAc > 1:12627552/1‑35 (MQ=255) cGGATATGTAAGAACAGCAACAACTACTGACCAAc > 1:17507138/1‑35 (MQ=255) cGGATATGTAAGAACAGCAACAACTACTGACCAAc > 1:13807375/1‑35 (MQ=255) cGGATATGTAAGAACAGCAACAACTACTGACCAAc > 1:19947390/1‑35 (MQ=255) cGGATATGTAAGAACAGCAACAACTACTGACCAAc > 1:18734438/1‑35 (MQ=255) cGGATATGTAAGAACAGCAACAACTACTGACCAAc > 1:18602757/1‑35 (MQ=255) ggATATGTAAGAACAGCAACAACTACTGACCAACg > 1:16731581/1‑35 (MQ=255) ggATATGTAAGAACAGCAACAACTACTGACCAACg > 1:15370493/1‑35 (MQ=255) ggATATGTAAGAACAGCAACAACTACTGACCAACg > 1:2179675/1‑35 (MQ=255) gATATGTAAGAACAGCAACAACTACTGACCAACGc > 1:18406277/1‑35 (MQ=255) atatgaaaaaccagcaaCAACTACTGACCAACGct < 1:10950425‑M2/18‑1 (MQ=255) atatGTAAGAACAGCAACAACTACTGACCAACGct > 1:8589627/1‑35 (MQ=255) atatGTAAGAACAGCAACAACTACTGACCAACGct > 1:4364781/1‑35 (MQ=255) atatGTAAGAACAGCAACAACTACTGACCAACGct > 1:5499926/1‑35 (MQ=255) atgaaaaaccagcaaCAACTACTGACCAACGcttc < 1:3602751‑M2/20‑1 (MQ=255) atGTAAGAACAGCAACAACTACTGACCAACGcttc > 1:6024187/1‑35 (MQ=255) atGTAAGAACAGCAACAACTACTGACCAACGcttc > 1:14843486/1‑35 (MQ=255) tgaaaaaccagcaaCAACTACTGACCAACGcttct < 1:7512496‑M2/21‑1 (MQ=255) tGTAAGAACAGCAACAACTACTGACCAACGcttct > 1:10422527/1‑35 (MQ=255) tGTAAGAACAGCAACAACTACTGACCAACGcttct > 1:19030890/1‑35 (MQ=255) gtaaaaccagcaaCAACTACTGACCAACGcttctt < 1:1399202‑M2/22‑1 (MQ=255) gaaaaaccagcaaCAACTACTGACCAACGcttctt < 1:3723104‑M2/22‑1 (MQ=255) gTAAGAACAGCAACAACTACTGACCAACGcttctt > 1:16172164/1‑35 (MQ=255) gTAAGAACAGCAACAACTACTGACCAACGcttctt > 1:714435/1‑35 (MQ=255) aaaaaaccagcaaCAACTACTGACCAACGcttctt < 1:18748438‑M2/22‑1 (MQ=255) tAAGAACAGCAACAACTACTGACCAACGCTTCttt > 1:20179534/1‑35 (MQ=255) tAAGAACAGCAACAACTACTGACCAACGCTTCttt > 1:760979/1‑35 (MQ=255) tAAGAACAGCAACAACTACTGACCAACGCTTCttt > 1:11239173/1‑35 (MQ=255) tAAGAACAGCAACAACTACTGACCAACGCTTCttt > 1:15699124/1‑35 (MQ=255) tAAGAACAGCAACAACTACTGACCAACGCTTCttt > 1:56240/1‑35 (MQ=255) tAAGAACAGCAACAACTACTGACCAACGCTTCttt > 1:15088757/1‑35 (MQ=255) aaagaccagcaaCAACTACTGACCAACGCTTCttt < 1:190103‑M2/23‑1 (MQ=255) aaaaaccagcaaCAACTACTGACCAACGCTTCttt < 1:17586635‑M2/23‑1 (MQ=255) aaaaaccagcaaCAACTACTGACCAACGCTTCttt < 1:15316934‑M2/23‑1 (MQ=255) aaGAACAGCAACAACTACTGACCAACGCTTCTTTa > 1:11111007/1‑35 (MQ=255) aaGAACAGCAACAACTACTGACCAACGCTTCTTTa > 1:20097514/1‑35 (MQ=255) aaGAACAGCAACAACTACTGACCAACGCTTCTTTa > 1:170090/1‑35 (MQ=255) aaGAACACCAACAACTACTGACCAACGCTTCTTTa > 1:16453588/1‑35 (MQ=255) aGAACAGCAACAACTACTGACCAACGCTTCTTTAc > 1:4966008/1‑35 (MQ=255) aGAACAGCAACAACTACTGACCAACGCTTCTTTAc > 1:8251643/1‑35 (MQ=255) aGAACAGCAACAACTACTGACCAACGCTTCTTTAc > 1:12640073/1‑35 (MQ=255) gAACAGCAACAACTACTGACCAACGCTTCTTTAcc > 1:20583735/1‑35 (MQ=255) gAACAGCAACAACTACTGACCAACGCTTCTTTAcc > 1:9645811/1‑35 (MQ=255) aaccagcaaCAACTACTGACCAACGCTTCTTTAcc < 1:714720‑M2/26‑1 (MQ=255) accagcaaCAACTACTGACCAACGCTTCTTTACCt < 1:10319329‑M2/27‑1 (MQ=255) accagcaaCAACTACTGACCAACGCTTCTTTACCt < 1:13382962‑M2/27‑1 (MQ=255) accagcaaCAACTACTGACCAACGCTTCTTTACCt < 1:2118805‑M2/27‑1 (MQ=255) accagcaaCAACTACTGACCAACGCTTCTTTACCt < 1:16958685‑M2/27‑1 (MQ=255) aaCAGCAACAACTACTGACCAACGCTTCTTTACCt > 1:13298373/1‑35 (MQ=255) aaCAGCAACAACTACTGACCAACGCTTCTTTACCt > 1:9421505/1‑35 (MQ=255) ccagcaaCAACTACTGACCAACGCTTCTTTACCTg < 1:18230663‑M2/28‑1 (MQ=255) aCAGCAACAACTACTGACCAACGCTTCTTTACCTg > 1:1053899/1‑35 (MQ=255) aCAGCAACAACTACTGACCAACGCTTCTTTACCTg > 1:19290567/1‑35 (MQ=255) cagcaaCAACTACTGACCAACGCTTCTTTACCTGa < 1:14228615‑M2/29‑1 (MQ=255) agcaaCAACTACTGACCAACGCTTCTTTACCTGat > 1:16477803‑M2/6‑35 (MQ=255) agcaaCAACTACTGACCAACGCTTCTTTACCTGat > 1:16473844‑M2/6‑35 (MQ=255) agcaaCAACTACTGACCAACGCTTCTTTACCTGat > 1:16243360‑M2/6‑35 (MQ=255) agcaaCAACTACTGACCAACGCTTCTTTACCTGat < 1:2894791‑M2/30‑1 (MQ=255) agcaaCAACTACTGACCAACGCTTCTTTACCTGat < 1:7309926‑M2/30‑1 (MQ=255) gcaaCAACTACTGACCAACGCTTCTTTACCTGata < 1:8255898‑M2/31‑1 (MQ=255) gcaaCAACTACTGACCAACGCTTCTTTACCTGata > 1:12249143‑M2/5‑35 (MQ=255) caaCAACTACTGACCAACGCTTCTTTACCTGatat > 1:16736750‑M2/4‑35 (MQ=255) aaCAACTACTGACCAACGCTTCTTTACCTGATATc < 1:8964677‑M2/33‑1 (MQ=255) aaCAACTACTGACCAACGCTTCTTTACCTGATATc > 1:5314974‑M2/3‑35 (MQ=255) aaCAACTACTGACCAACGCTTCTTTACCTGATATc > 1:1845978‑M2/3‑35 (MQ=255) aaCAACTACTGACCAACGCTTCTTTACCTGATATc < 1:1399582‑M2/33‑1 (MQ=255) aaCAACTACTGACCAACGCTTCTTTACCTGATATc < 1:12232466‑M2/33‑1 (MQ=255) aaCAACTACTGACCAACGCTTCTTTACCTGATATc > 1:11900624‑M2/3‑35 (MQ=255) aaCAACTAATGACCAACGCTTCTTTACCTGATATc < 1:11770661‑M2/33‑1 (MQ=255) aCAACTACTGACCAACGCTTCTTTACCTGATATCa < 1:3163043‑M2/34‑1 (MQ=255) aCAACTACTGACCAACGCTTCTTTACCTGATATCa < 1:9743474‑M2/34‑1 (MQ=255) caacTACTGACCAACGCTTCTTTACCTGATATCAg < 1:6518317/35‑1 (MQ=255) caacTACTGACCAACGCTTCTTTACCTGATATCAg < 1:455438/35‑1 (MQ=255) caacTACTGACCAACGCTTCTTTACCTGATATCAg > 1:2881584/1‑35 (MQ=255) caacTACTGACCAACGCTTCTTTACCTGATATCAg < 1:18069459/35‑1 (MQ=255) caacTACTGACCAACGCTTCTTTACCTGATATCAg > 1:16237278/1‑35 (MQ=255) caacTACTGACCAACGCTTCTTTACCTGATATCAg < 1:1618248/35‑1 (MQ=255) caacTACTGACCAACGCTTCTTTACCTGATATCAg > 1:15468322/1‑35 (MQ=255) caacTACTGACCAACGCTTCTTTACCTGATATCAg < 1:11458094/35‑1 (MQ=255) | TAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAG > REL606/3800416‑3800484 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |