New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 672796 | 79 (0.770) | 10 (0.150) | 3/32 | NT | 16.4% | coding (181/1539 nt) | lnt | apolipoprotein N‑acyltransferase |
? | REL606 | 1048881 = | 49 (0.720) | intergenic (‑78/‑349) | serT/hyaA | tRNA‑Ser/hydrogenase 1, small subunit |
Only 100 of 190 total aligned reads displayed.
ATACCGCTGCCAAAGAGACCAAATCCCCAGCCAAAGCCAATAGCGGCAGACTGGAGTGGACGACGGTTA > REL606/672762‑672830 | accccgctGCCAAAGAGACCAAATCCCCAGCCAAA < 1:5689657‑M1/32‑1 (MQ=255) aTACCGCTGCCAAAGAGACCAAATCCCCAGCCAAA > 1:588896‑M1/1‑35 (MQ=255) aTACCGCTGCCAAAGAGACCAAATCCCCAGCCAAA > 1:7065226‑M1/1‑35 (MQ=255) tACCGCTGCCAAAGAGACCAAATCCCCagccaaag > 1:17962878/1‑35 (MQ=255) cGCTGCCAAAGAGACCAAATCCCCagccaaagcca < 1:4904267/35‑1 (MQ=255) cGCTGCCAAAGAGACCAAATCCCCagccaaagcca > 1:10836594/1‑35 (MQ=255) gCTGCCAAAGAGACCAAATCCCCagccaaagccaa > 1:11016285/1‑35 (MQ=255) gCTGCCAAAGAGACCAAATCCCAagccaaagccaa < 1:2728813/35‑1 (MQ=255) ccTGCCAAAGAGACCAAATCCCCagccaaagccaa < 1:6615011/34‑1 (MQ=255) cTGCCAAAGAGACCAAATCCCCAGCCAAAGCCAAt > 1:14490388/1‑35 (MQ=255) cTGCCAAAGAGACCAAATCCCCAGCCAAAGCCAAt > 1:8572951/1‑35 (MQ=255) cTGCCAAAGAGACCAAATCCCCAGCCAAAGCCAAt > 1:12508793/1‑35 (MQ=255) cTGCCAAAGAGACCAAATCCCCAGCCAAAGCCAAt > 1:17131430/1‑35 (MQ=255) cTGCCAAAGAGACCAAATCCCCAGCCAAAGCCAAt > 1:9506027/1‑35 (MQ=255) tGCCAAAGAGACCAAATCCCCAGCCAAAGCCAATa > 1:8733815/1‑35 (MQ=255) cAAAGAGACCAAATCCCCAGCCAAAGTCAATAGCg > 1:5115277/1‑35 (MQ=255) cAAAGAGACCAAACCCCCAGCCAAAGCCAATAGCg < 1:12826746/35‑1 (MQ=255) aaaGAGACCAAATCCCCAGCCAAAGCCAATAGCgg > 1:11617168/1‑35 (MQ=255) aaaGAGACCAAATCCCCAGCCAAAGCCAATAGCgg > 1:1844859/1‑35 (MQ=255) aaaGAGACCAAATCCCCAGCCAAAGCCAATAGCgg > 1:11316122/1‑35 (MQ=255) aaaGAGACCAAATCCCCAGCCAAAGCCAATAGCgg > 1:539616/1‑35 (MQ=255) aaGAGACCAAATCCCCAGCCAAAGCCAATAGCGGc > 1:15755028/1‑35 (MQ=255) agagACCAAATCCCCAGCCAAAGCCAATAGCGGCa > 1:8002491/1‑35 (MQ=255) agagACCAAATCCCCAGCCAAAGCCAATAGCGGCa > 1:14870703/1‑35 (MQ=255) agagACCAAATCCCCAGCCAAAGCCAATAGCGGCa > 1:8781251/1‑35 (MQ=255) agagACCAAATCCCCAGCCAAAGCCAATAGCGGCa > 1:9035506/1‑35 (MQ=255) gagaCCAAATCCCCAGCCAAAGCCAATAGCGGCAg > 1:14274940/1‑35 (MQ=255) gagaCCAAATCCCCAGCCAAAGCCAATAGCGGCAg > 1:11993504/1‑35 (MQ=255) agaCCAAATCCCCAGCCAAAGCCAATAGCGGCAgg > 1:20245182/1‑34 (MQ=255) agaCCAAATCCCCAGCCAAAGCCAATAGCGGCAGa > 1:19937372/1‑35 (MQ=255) agaCCAAATCCCCAGCCAAAGCCAATAGCGGCAGa > 1:7437387/1‑35 (MQ=255) agaCCAAATCCCCAGCCAAAGCCAATAGCGGCAGa > 1:9438803/1‑35 (MQ=255) gaCCAAATCCCCAGCCAAAGCCAATAGCGGCAGAc > 1:18155977/1‑35 (MQ=255) gccaAAACCCCAGCCAAAagtgcattgatagcgtg < 1:20381842‑M1/34‑18 (MQ=255) cccaAAACCCCAGCCAAAagtgcattgatagcgtg < 1:11521607‑M1/34‑18 (MQ=255) ccaaaaCCCCCAGCAAAAGCCAATAGCGGCAGACt < 1:12252094/32‑1 (MQ=25) aCCAAATCCCCAGCCAAAGCCAATAGCGGCAGACt > 1:11237007/1‑35 (MQ=255) aCCAAATCCCCAGCCAAAGCCAATAGCGGCAGACt > 1:2689646/1‑35 (MQ=255) aCCAAATCCCCAGCCAAAGCCAATAGCGGCAGACt > 1:6902922/1‑35 (MQ=255) ccAAATCCCCAGCCAAAGCCAATAGCGGCAGACTg > 1:13944961/1‑35 (MQ=255) cAAATCCCCAGCCAAAGCCAATAGCGGCAGACTgg > 1:14916695/1‑35 (MQ=255) cAAAACCCCAGCCAAAagtgcattgatagcgtgaa < 1:10665819‑M1/35‑20 (MQ=255) aaaaaCCCCAGCCAAAagtgcattgatagcgtgaa < 1:924550‑M1/34‑20 (MQ=255) aaaCCCCCACCAAAAGCCAATAGCGGCAGACTGGa < 1:5631174/35‑1 (MQ=25) aaaACCCCAGCCAAAagtgcattgatagcgtgaaa < 1:10316748‑M1/35‑21 (MQ=255) accccccACCAAAAGCCAATAGCGGCAGACTGGAg < 1:17521459/32‑1 (MQ=25) aaaccccagcCAAAagtgcattgatagcgtgaaat < 1:3704‑M1/32‑22 (MQ=255) aaTCCCCAGCCAAAGCCAATAGCGGCAGACTGGAg > 1:9363498/1‑35 (MQ=255) aaTCCCCAGCCAAAGCCAATAGCGGCAGACTGGAg > 1:13257458/1‑35 (MQ=255) aaccccagCCAAAagtgcattgatagcgtgaaata < 1:9153490‑M1/33‑23 (MQ=255) aTCCCCAGCCAAAGCCAATAGCGGCAGACTGGAGt > 1:3313051/1‑35 (MQ=255) aTCCCCAGCCAAAGCCAATAGCGGCAGACTGGAGt > 1:10120436/1‑35 (MQ=255) tCCCCAGCCAAAGCCAATAGCGGCAGACTGGAGTg > 1:16365586/1‑35 (MQ=255) cccccACCCAAAGCCAATAGCGGCAGACTGGAGTg < 1:8934048/34‑1 (MQ=255) ccccaAGCAAAAGCCAATAGCGGCAGACTGGAGTg < 1:463629/34‑1 (MQ=25) accccaGCCAAAagtgcattgatagcgtgaaataa < 1:20069333‑M1/34‑24 (MQ=255) ccccGGCCAAAGCCAATAGCGGCAGACTGGAGTgg < 1:3126811/35‑1 (MQ=255) ccccAGCCAAAagtgcattgatagcgtgaaataac < 1:18752642‑M1/35‑25 (MQ=255) ccccAGCCAAAagtgcattgatagcgtgaaataac < 1:17245407‑M1/35‑25 (MQ=255) ccccAGCCAAAagtgcattgatagagtgaaataac < 1:4236548‑M1/35‑25 (MQ=255) ccccACCAAAAGCCAATAGCGGCAGACTGGAGTgg < 1:2541923/35‑1 (MQ=38) cccAGCCAAAGCCAATAGCGGGAGACTGGGGTGga > 1:15704780/1‑35 (MQ=37) cccAGCCAAAGCCAATAGCGGCAGACTGGAGGGga > 1:5996411/1‑35 (MQ=255) ccAGCCAAAagtgcattgatagcgtgaaataacag < 1:11767286‑M1/35‑27 (MQ=255) ccAGCAAAAGCCAATAGCGGCAGACTGGAGTGgac < 1:10083770/35‑1 (MQ=255) cacccaaagccaaTAGCGGCAGACTGGAGTGgacg < 1:8455236/32‑1 (MQ=255) cacccaaagccaaTAGCGGCAGACTGGAGTGgacg < 1:17956091/32‑1 (MQ=255) cAGCCGAAagtgcattgatagcgtgaaataacagc < 1:20133‑M1/35‑28 (MQ=255) cAGCCAAAGCCAATAGCGGCAGACTGGAGTGgacg > 1:2813132/1‑35 (MQ=255) cAGCCAAAGCCAATAGCGGCAGACTGGAGTGgacg > 1:13597257/1‑35 (MQ=255) cAGCCAAAGCCAATAGCGGCAGACTGGAGTGgacg > 1:5348709/1‑35 (MQ=255) cAGCAAAAGCCAATAGCGGCAGACTGGAGTGgacg < 1:1043951/35‑1 (MQ=255) agccaaagccaaTAGCGGCAGACTGGAGGGgacga > 1:3493860/1‑35 (MQ=255) agcaaaagccaaTAGCGGCAGACTGGAGTGgacga < 1:14559075/35‑1 (MQ=255) acacaaagccaaTAGCGGCAGACTGGAGTGgacga < 1:1729899/32‑1 (MQ=255) aGCCAAAagtgcattgatagcgtgaaataacagca > 1:9773785‑M1/1‑7 (MQ=255) aGCCAAAagtgcattgatagcgtgaaataacagca > 1:5040993‑M1/1‑7 (MQ=255) aGCCAAAagtgcattgatagcgtgaaataacagca > 1:19262024‑M1/1‑7 (MQ=255) aGCCAAAagtgcattgatagcgtgaaataacagca < 1:19392626‑M1/35‑29 (MQ=255) gccaaagccaaTAGCGGCAGACTGGAGTGgacgac < 1:3943829/35‑1 (MQ=255) gCCAAAagtgcattgatagcgtgaaataacagcag < 1:4376230‑M1/35‑30 (MQ=255) gCCAAAagtgcattgatagcgtgaaataacagcag < 1:16496329‑M1/35‑30 (MQ=255) gCCAAAagtgcattgatagcgtgaaataacagcag > 1:19100133‑M1/1‑6 (MQ=255) gCCAAAagtgcattgatagcgtgaaataacagcag > 1:18940060‑M1/1‑6 (MQ=255) gCCAAAagtgcattgatagcgtgaaataacagaag < 1:15930686‑M1/35‑30 (MQ=255) ccaaagccaaTAGCGGCATACTGGAGTGGacgacg > 1:13084468/1‑35 (MQ=255) ccaaagccaaTAGCGGCAGACTGGAGTGGacgacg < 1:11594188/35‑1 (MQ=255) ccAAAagtgcattgatagcgtgaaataacagcaga > 1:7579899‑M1/1‑5 (MQ=255) caaagccaaTAGCGGCAGACTGGAGTGGACGACgg > 1:13535326/1‑35 (MQ=255) cAAAagtgcattgatagcgtgaaataacagcagat > 1:20000678‑M1/1‑4 (MQ=255) aaaagccaaTAGCGGCAGACTGGAGTGGACGACgg < 1:12869818/34‑1 (MQ=255) aaaagccaaTAGCGGCAGACTGGAGTGGACGACgg < 1:8867603/34‑1 (MQ=255) aaagccaaTAGCGGCAGACTGGAGTGGACGGCggg > 1:14063661/1‑34 (MQ=255) aaagccaaTAGCGGCAGACTGGAGTGGACGACGGt < 1:19626056/35‑1 (MQ=255) aaaagtgcattgatagcgtgaaataacagcagatt < 1:2946377‑M1/35‑33 (MQ=255) aagccaaTAGCGGCAGACTGGAGTGGACGACGGtt < 1:8312411/35‑1 (MQ=255) aaagtgcattgatagcgtgaaataacagcagattg > 1:12350611‑M1/1‑2 (MQ=255) agccaaTAGCGGCAGACTGGAGTGGACGACGGTTa < 1:6274548/35‑1 (MQ=255) aagtgcatttatagcgtgaaataacagcagattga > 1:17419212‑M1/1‑1 (MQ=255) aagtgcattgatagcgtgaaataacagcagattga > 1:7638751‑M1/1‑1 (MQ=255) | ATACCGCTGCCAAAGAGACCAAATCCCCAGCCAAAGCCAATAGCGGCAGACTGGAGTGGACGACGGTTA > REL606/672762‑672830 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |