New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 805852 = | 114 (1.110) | 112 (1.380) | 8/38 | NT | 55.4% | intergenic (+279/‑300) | bioD/uvrB | dethiobiotin synthetase/excinuclease ABC subunit B |
? | REL606 | = 1193676 | NA (NA) | noncoding (62/768 nt) | IS1 | repeat region |
Only 100 of 617 total aligned reads displayed.
TGGCGTTAAAGACGGCTCAAAGAAATATCTTTTATTTTTTAACTGGTTAGATAAATGCAATGGCAGTCA > REL606/805818‑805886 | atggtgtttttgaggtgctccagtggctttttttt < 1:10062221‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggctttttttt < 1:18103204‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggctttttttt < 1:19488875‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggctttttttt < 1:15837296‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggctttttttt < 1:3920372‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggctttttttt < 1:15091417‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggctttttttt < 1:8014877‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggctttttttt < 1:14743549‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggctttttttt < 1:14434131‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggcttttgttt < 1:17411959‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggcttttgttt < 1:18822437‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggcttttgttt < 1:540611‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggcttttgttt < 1:7872897‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggcttttgttt < 1:2343502‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggcttttgttt < 1:2499403‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggcttttgttt < 1:3501670‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggcttttgttt < 1:12449348‑M1/1‑1 (MQ=255) atggtgtttttgaggtgctccagtggcttttgttt < 1:4805926‑M1/1‑1 (MQ=255) tggtgtttttgaggtgctccagtggcttttttttt < 1:6419406‑M1/2‑1 (MQ=255) tggtgtttttgaggtgctccagtggcttttttttt < 1:10577958‑M1/2‑1 (MQ=255) tggtgtttttgaggtgctccagtggcttttttttt < 1:8213440‑M1/2‑1 (MQ=255) tggtgtttttgaggtgctccagtggcttttttttc < 1:3380281‑M1/2‑2 (MQ=255) tggtgtttttgaggtgctccagtggcttttttttc < 1:3752427‑M1/2‑2 (MQ=255) tggtgtttttgaggtgctccagtggcttttgtttt < 1:1299399‑M1/2‑1 (MQ=255) tggtgtttttgaggtgctccagtggcttttgtttt < 1:7618751‑M1/2‑1 (MQ=255) ggCGTTAAAGACGGCTCAAAGAAATATCTTTTAtt < 1:20007575/35‑1 (MQ=255) ggtgttttttaggtgctccagtggctttttttttt < 1:5767615‑M1/3‑1 (MQ=255) ggtgtttttgaggtgctccagtggctttttttttt < 1:4331617‑M1/3‑1 (MQ=255) ggtgtttttgaggtgctccagtggctttttttttt < 1:20281699‑M1/3‑1 (MQ=255) ggtgtttttgaggtgctccagtggctttttttttt < 1:11828236‑M1/3‑1 (MQ=255) ggtgtttttgaggtgctccagtggctttttttttt < 1:1256210‑M1/3‑1 (MQ=255) ggtgtttttgaggtgctccagtggcttttttttct < 1:12177379‑M1/3‑3 (MQ=255) ggtgtttttgaggtgctccagtggcttttgttttt < 1:214410‑M1/3‑1 (MQ=255) ggtgtttttgaggtgctccagtggcttttgttttt < 1:4207951‑M1/3‑1 (MQ=255) ggtgtttttgaggtgctccagtggcttttgttttt < 1:2997420‑M1/3‑1 (MQ=255) ggtgtttttgaggtgctccagtggcttttgttttt < 1:8432317‑M1/3‑1 (MQ=255) ggtgtttttgaggtgctccagtggcttttgttttt < 1:10208899‑M1/3‑1 (MQ=255) ggtgtttttgaggtgctccagtggcttttgttttt < 1:13302439‑M1/3‑1 (MQ=255) gCGTTAAAGACGGCTCAAAGAAATATCTTTTAttt < 1:874916/35‑1 (MQ=255) gtgtttttgaggtgctccagtggcttttttttttt < 1:3217032‑M1/4‑1 (MQ=255) gtgtttttgaggtgctccagtggcttttttttttt < 1:4599977‑M1/4‑1 (MQ=255) gtgtttttgaggtgctccagtggcttttttttttt < 1:5934497‑M1/4‑1 (MQ=255) gtgtttttgaggtgctccagtggcttttttttttt < 1:6109279‑M1/4‑1 (MQ=255) gtgtttttgaggtgctccagtggcttttttttttt < 1:11331957‑M1/4‑1 (MQ=255) gtgtttttgaggtgctccagtggcttttttttttt < 1:16381683‑M1/4‑1 (MQ=255) gtgtttttgaggtgctccagtggctttttttttta < 1:8305537‑M1/4‑2 (MQ=255) gtgtttttgaggtgctccagtggcttttttttcta < 1:1928512‑M1/4‑4 (MQ=255) gtgtttttgaggtgctccagtggcttttgtttttt < 1:2796139‑M1/4‑1 (MQ=255) gtgtttttgaggtgctccagtggcttttgttttta < 1:17181080‑M1/4‑2 (MQ=255) gtgtttttgaggtgctccagtggcttttgttttta < 1:1895541‑M1/4‑2 (MQ=255) gtgtttttgaggtgctccagtggcttttgttttta < 1:728430‑M1/4‑2 (MQ=255) gtgtttttgaggtgctccagtggcttctttttttt < 1:11163790‑M1/4‑1 (MQ=255) tgtttttgaggtgctccagtggctttttttttttt < 1:10795030‑M1/5‑1 (MQ=255) tgtttttgaggtgctccagtggctttttttttttt < 1:12828640‑M1/5‑1 (MQ=255) tgtttttgaggtgctccagtggctttttttttttt < 1:2892809‑M1/5‑1 (MQ=255) tgtttttgaggtgctccagtggctttttttttttt < 1:14177673‑M1/5‑1 (MQ=255) tgtttttgaggtgctccagtggctttttttttttt < 1:8126422‑M1/5‑1 (MQ=255) tgtttttgaggtgctccagtggctttttttttttt < 1:19146415‑M1/5‑1 (MQ=255) tgtttttgaggtgctccagtggctttttttttttt < 1:6905490‑M1/5‑1 (MQ=255) tgtttttgaggtgctccagtggcttttttttttct < 1:13719966‑M1/5‑3 (MQ=255) tgtttttgaggtgctccagtggcttcttttttttt < 1:16600260‑M1/5‑1 (MQ=255) gTTAAAGACGGCTCAAAGAAATATCTTTTAttttt < 1:14284432/35‑1 (MQ=255) gtttttgaggtgctccagtggcttttttttttttt < 1:15644839‑M1/6‑1 (MQ=255) gtttttgaggtgctccagtggcttttttttttttt < 1:924548‑M1/6‑1 (MQ=255) gtttttgaggtgctccagtggcttttttttttttt < 1:17034336‑M1/6‑1 (MQ=255) gtttttgaggtgctccagtggcttttttttttttt < 1:9587917‑M1/6‑1 (MQ=255) gtttttgaggtgctccagtggcttttttttttttc < 1:5195440‑M1/6‑2 (MQ=255) gtttttgaggtgctccagtggcttttttttttttc < 1:12771244‑M1/6‑2 (MQ=255) gtttttgaggtgctccagtggcttttttttttatc < 1:20575811‑M1/6‑4 (MQ=255) gtttttgaggtgctccagtggcttttttttttatc < 1:11972366‑M1/6‑4 (MQ=255) gtttttgaggtgctccagtggcttttgtttttttc < 1:20404666‑M1/6‑2 (MQ=255) tttttgaggtgctccagtggcttttttttttttct < 1:19745614‑M1/7‑3 (MQ=255) tttttgaggtgctccagtggctttttttTTTTTTa < 1:13984822‑M1/7‑1 (MQ=255) tttttgaggtgctccagtggctttttttTTTTTTa < 1:18419488‑M1/7‑1 (MQ=255) tttttgaggtgctccagtggctttttttTTTTTTa < 1:17641075‑M1/7‑1 (MQ=255) ttttgaggtgctccagtggcttttttttttttttc < 1:13573812‑M1/8‑3 (MQ=255) tttgaggtgctccagtggctttttttTTTTttacc < 1:6611989‑M1/9‑3 (MQ=255) tttgaggtgctccagtggctttttttTTTTTTAAc < 1:9078890‑M1/9‑1 (MQ=255) tttgaggtgctccagtggcttttgttTTTTTTAAc < 1:11009431‑M1/9‑1 (MQ=255) aaGACGGCTCAAAGAAATATCTTTTATTTTTTAAc < 1:11534444/35‑1 (MQ=255) aGACGGCTCAAAGAAATATCTTTTATTTTTTAACt > 1:15231922/1‑35 (MQ=255) aGACGGCTCAAAGAAATATCTTTTATTTTTTAACt > 1:14983074/1‑35 (MQ=255) gaggtgctccagtggctttttttTTTTTTAGCTgg < 1:14671483‑M1/12‑1 (MQ=255) gaggtgctccagtggctttttttTTTTTTAACTgg < 1:4037395‑M1/12‑1 (MQ=255) aCGGCTCAAAGAAATATCTTTTATTTTTTAACTgg < 1:8875068/35‑1 (MQ=255) aCGGCTCAAAGAAATATCTTTTATTTTTTAACTgg > 1:14554790/1‑35 (MQ=255) gCTCAAAGAAATATCTTTTATTTTTTAACTGGTTa < 1:5578074/35‑1 (MQ=255) gCTCAAAGAAATATCTTTTATTTTTTAACTGGTTa > 1:19883754/1‑35 (MQ=255) tCAAAGAAATATCTTTTATTTTTTAACTGGTTAGa > 1:7192193/1‑35 (MQ=255) aaaGAAATATCTTTTATTTTTTAACTGGTTAGATa > 1:10458448/1‑35 (MQ=255) aGAAATATCTTTTATTTTTTAACTGGTTAGATaaa > 1:16778128/1‑35 (MQ=255) atatCTTTTATTTTTTAACTGGTTAGATAAATGCa < 1:4943788/35‑1 (MQ=255) tatCTTTTATTTTTTAACTGGTTAGATAAATGCaa > 1:9795533/1‑35 (MQ=255) tatCTTTTATTTTTTAACTGGTTAGATAAATGCaa > 1:15459033/1‑35 (MQ=255) atCTTTTATTTTTTAACTGGTTAGATAAATGCAAt < 1:17850644/35‑1 (MQ=255) cTTTTATTTTTTAACTGGTTAGATAAATGCAATgg > 1:7697521/1‑35 (MQ=255) cTTTTATTTTTTAACTGGTTAGATAAATGCAATgg < 1:16096181/35‑1 (MQ=255) cTTTTATTTTTTAACTGGTTAGATAAATGCAATgg > 1:7092064/1‑35 (MQ=255) aTTTTTTAACTGGTTAGATAAATGCAATGGCAGTc < 1:9493439/35‑1 (MQ=255) aTTTTTTAACTGGTTAGATAAATGCAATGGCAGTc < 1:17976962/35‑1 (MQ=255) | TGGCGTTAAAGACGGCTCAAAGAAATATCTTTTATTTTTTAACTGGTTAGATAAATGCAATGGCAGTCA > REL606/805818‑805886 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |