New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 255937 = | 63 (0.610) | 13 (0.150) | 7/40 | NT | 22.5% | coding (477/1056 nt) | dinB | DNA polymerase IV |
? | REL606 | 3367494 = | 37 (0.430) | intergenic (‑80/+27) | yhdN/rplQ | hypothetical protein/50S ribosomal protein L17 |
ATGCCGGAACTTCTGCCGGCGTAATCACAAACTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/255974‑255937 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCT > REL606/3367494‑3367527 tTGCCGGAACTTCTGCCGGCGTAATCACAAACTGG < 1:18200011/34‑1 agGCCGGAACTTCTGCCGGCGTAATCACAAACTGG < 1:12167011/33‑1 ATGCCGGAACTTCTGCCGGCGTAATCACAAACTGG < 1:222899/35‑1 ATGCCGGAACTTCTGCCGGCGTAATCACAAACTGG < 1:17970379/35‑1 ATGCCGGAACTTCTGCCGGCGTAATCACAAACTGG > 1:17867133/1‑35 ATGCCGGAACTTCTGCCGGCGTAATCACAAACTGG < 1:5687298/35‑1 ATGCCGGAACTTCTGCCGGCGTAATCACAAACTGG > 1:12996235/1‑35 ATGCCGGAACTTCTGCCGGCGTAATCACAAACTGG > 1:11404017/1‑35 ATGCCGGAACTTCTGCCGGCGTAATCACAAACTGG < 1:9129625/35‑1 taCCGGAACTTCTGCCGGCGTAATCACAAACTGGC > 1:19047204/3‑35 TGCCGGAACTTCTGCCGGCGTAATCACAAACTGGC > 1:20037129/1‑35 TGCCGGAACTTCTGCCGGCGTAATCACAAACTGGC > 1:11883927/1‑35 TGCCGGAACTTCTGCCGGCGTAATCACAAACTGGC > 1:2587911/1‑35 GCCGGAACTTCTGCCGGCGTAATCACAAACTGGCC < 1:10340246/35‑1 GCCGGAACTTCTGCCGGCGTAATCACAAACTGGCC < 1:16020152/35‑1 GCCGGAACTTCTGCCGGCGTAATCACAAACTGGCC < 1:9702793/35‑1 GCCGGAACTTCTGCCGGCGTAATCACAAACTGGCC > 1:14793899/1‑35 GCCGGAACTTCTGCCGGCGTAATCACAAACTGGCC > 1:5854652/1‑35 GCCGGAACTTCTGCCGGCGTAATCACAAACTGGCC > 1:14293491/1‑35 CCGGAACTTCTGCCGGCGTAATCACAAACTGGCCG > 1:1930745/1‑35 CCGGAACTTCTGCCGGCGTAATCACAAACTGGCCG > 1:17970301/1‑35 CGGAACTTCTGCCGGCGTAATCACAAACTGGCCGG > 1:16614247/1‑35 CGGAACTTCTGCCGGCGTAATCACAAACTGGCCGG > 1:7405450/1‑35 CGGAACTTCTGCCGGCGTAATCACAAACTGGCCGG > 1:4217360/1‑35 CGGAACTTCTGCCGGCGTAATCACAAACTGGCCGG > 1:17883301/1‑35 GGAACTTCTGCCGGCGTAATCACAAACTGGCCGGG > 1:17411677/1‑35 GGAACTTCTGCCGGCGTAATCACAAACTGGCCGGG > 1:15709084/1‑35 GGAACTTCTGCCGGCGTAATCACAAACTGGCCGGG > 1:8084689/1‑35 GAACTTCTGCCGGCGTAATCACAAACTGGCCGGGG > 1:10954597/1‑35 GAACTTCTGCCGGCGTAATCACAAACTGGCCGGGG > 1:6814676/1‑35 AACTTCTGCCGGCGTAATCACAAACTGGCCGGGGg > 1:18597655/1‑34 AACTTCTGCCGGCGTAATCACAAACTGGCCGGGGg > 1:20245313/1‑34 AACTTCTGCCGGCGTAATCACAAACTGGCCGGGGg > 1:2748504/1‑34 AACTTCTGCCGGCGTAATCACAAACTGGCCGGGGg > 1:2002588/1‑34 ACTTCTGCCGGCGTAATCACAAACTGGCCGGGGgg > 1:9933351/1‑33 ACTTCTGCCGGCGTAATCACAAACTGGCCGGGGgg > 1:4569320/1‑33 ACTTCTGCCGGCGTAATCACAAACTGGCCGGGGgg > 1:6705003/1‑33 ACTTCTGCCGGCGTAATCACAAACTGGCCGGGGgg > 1:8065194/1‑33 ACTTCTGCCGGCGTAATCACAAACTGGCCGGGGgg > 1:14009682/1‑33 CTTCTGCCGGCGTAATCACAAACTGGCCGGGGGGG > 1:7907057/1‑35 CTTCTGCCGGCGTAATCACAAACTGGCCGGGGGGG > 1:16182297/1‑35 TTCTGCCGGCGTAATCACAAACTGGCCGGGGGGGG > 1:2118317/1‑35 TTCTGCCGGCGTAATCACAAACTGGCCGGGGGGGG > 1:13294908/1‑35 TCTGCCGGCGTAATCACAAACTGGCCGGGGGGGGg > 1:593729/1‑34 TCTGCCGGCGTAATCACAAACTGGCCGGGGGGGGT > 1:7540865/1‑35 TCTGCCGGCGTAATCACAAACTGGCCGGGGGGGGT > 1:6313059/1‑35 TCTGCCGGCGTAATCACAAACTGGCCGGGGGGGGT > 1:2988450/1‑35 CTGCCGGCGTAATCACAAACTGGCCGGGGGGGGTg > 1:6650613/1‑34 CTGCCGGCGTAATCACAAACTGGCCGGGGGGGGTT > 1:13804474/1‑35 GCCGGCGTAATCACAAACTGGCCGGGGGGGGTTTT > 1:11208643/1‑35 CGGCGTAATCACAAACTGGCCGGGGGGGGTTTTTT > 1:6717212/1‑35 GGCGTAATCACAAACTGGCCGGGGGGGGTTTTTTT > 1:4005587/1‑35 GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTAC < 1:19595732/35‑1 GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTAC > 1:11914575/1‑35 GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTAC < 1:6218336/35‑1 CCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACT > 1:4052160/1‑35 CCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACT < 1:20176470/35‑1 CCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACT < 1:13568273/35‑1 CCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACT > 1:19636477/1‑35 CGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTC < 1:10098887/35‑1 CGGGGCGGGGTTTTTTACGTTGCTTCAGATTACTC > 1:7259565/1‑35 CGGGGCGGGGTTTTTTACGTTGCTTCAGATTACTC > 1:5606228/1‑35 GGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCT < 1:14759536/35‑1 GGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCT > 1:10278170/1‑35 GGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCT < 1:17595087/35‑1 GGGGCGGGGTTTTTTACGTTGCTTCAGATTACTCT > 1:2447313/1‑35 ATGCCGGAACTTCTGCCGGCGTAATCACAAACTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/255974‑255937 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCT > REL606/3367494‑3367527 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |