New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3686160 | 56 (0.540) | 23 (0.230) | 5/46 | NT | 30.0% | coding (402/741 nt) | yiaT | hypothetical protein |
? | REL606 | = 4467594 | NA (NA) | intergenic (‑281/+73) | holC/pepA | DNA polymerase III subunit chi/leucyl aminopeptidase |
Only 100 of 144 total aligned reads displayed.
TGATGCGACGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTT > REL606/4467563‑4467628 | tGATGCGACGCTTGCGCGTCTTATCAGGCCTACGa > 1:4112673/1‑35 (MQ=32) tGATGCGACGCTTGCGCGTCTTATCAGGCCTACGa < 1:11133823/35‑1 (MQ=32) tGATGCGACGCTTGCGCGTCTTATCAGGCCTACGa > 1:2228030/1‑35 (MQ=32) gATGCGACGCTTGCGCGTCTTATCAGGCCTACGAg < 1:8644133/35‑1 (MQ=35) gATGCGACGCTTGCGCGTCTTATCAGGCCTACGAg < 1:11613309/35‑1 (MQ=35) gATGCGACGCTTGCGCGTCTTATCAGGCCTACGAg > 1:2408081/1‑35 (MQ=35) aTGCGACGCTTGCGCGTCTTATCAGGCCTACGAGt < 1:10254893/35‑1 (MQ=38) aTGCGACGCTTGCGCGTCTTATCAGGCCTACGAGt > 1:6289428/1‑35 (MQ=38) tGCGACGCTTGCGCGTCTTATCAGGCCTACGAGtt < 1:6463066/35‑1 (MQ=40) tGCGACGCTTGCGCGTCTTATCAGGCCTACGAGtt < 1:11234767/35‑1 (MQ=40) tGCGACGCTTGCGCGTCTTATCAGGCCTACGAGtt > 1:16794288/1‑35 (MQ=40) tGCGACGCTTGCGCGTCTTATCAGGCCTACGAGtt < 1:397642/35‑1 (MQ=40) gCGACGCTTGCGCGTCTTATCAGGCCTACGAGTTc > 1:4989060/1‑35 (MQ=255) gCGACGCTTGCGCGTCTTATCAGGCCTACGAGTTc < 1:12639338/35‑1 (MQ=255) cGACGCTTGCGCGTCTTATCAGGCCTACGAGTTCa < 1:16600642/35‑1 (MQ=255) cGACGCTTGCGCGTCTTATCAGGCCTACGAGTTCa > 1:723112/1‑35 (MQ=255) aCGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGt > 1:17216260/1‑35 (MQ=255) aCGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGt < 1:6758616/35‑1 (MQ=255) aCGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGt < 1:20162270/35‑1 (MQ=255) aCGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGt < 1:10891257/35‑1 (MQ=255) aCGCTTGCGCGTCTTATCAGGCCTACAAGATcgga > 1:16316910/1‑32 (MQ=1) cGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTg < 1:599766/35‑1 (MQ=255) cGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTg > 1:8847434/1‑35 (MQ=255) gcctGCGCGTCTTATCAGGCCTACGAGTTCAGTGc > 1:5400494/4‑35 (MQ=255) gCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGc < 1:15699232/35‑1 (MQ=255) gCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGc > 1:5926457/1‑35 (MQ=255) gCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGc > 1:14556584/1‑35 (MQ=255) gCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGc > 1:12799929/1‑35 (MQ=255) gCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGc > 1:7980171/1‑35 (MQ=255) gCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGc > 1:8747811/1‑35 (MQ=255) gCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGc < 1:2608890/35‑1 (MQ=255) gCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGc > 1:3732829/1‑35 (MQ=255) cTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCt < 1:4858954/35‑1 (MQ=255) cTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCt < 1:9836533/35‑1 (MQ=255) cTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCt > 1:906295/1‑35 (MQ=255) cTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCt < 1:13100810/35‑1 (MQ=255) ttGCGCGTCTTATCAGGCCTACGAGTTCAGTGCtg < 1:3623379/35‑1 (MQ=255) ttGCGCGTCTTATCAGGCCTACGAGTTCAGTGCtg < 1:17604516/35‑1 (MQ=255) ttGCGCGTCTTATCAGGCCTACGAGTTCAGTGCtg < 1:18924979/35‑1 (MQ=255) tGCGCGTCTTATCAGGCCTACGAGTTCAGTGCtgt > 1:10258595/1‑35 (MQ=255) tGCGCGTCTTATCAGGCCTACGAGTTCAGTGCtgt < 1:12367300/35‑1 (MQ=255) tGCGCGTCTTATCAGGCCTACGAGTTCAGTGCtgt < 1:16268066/35‑1 (MQ=255) tGCGCGTCTTATCAGGCCTACGAGTTCAGTGCtgt < 1:5590875/35‑1 (MQ=255) tGCGCGTCTTATCAGGCCTACGAGTTCAGTGCtgt < 1:14246825/35‑1 (MQ=255) tGCGCGTCTTATCAGGCCTACGAGTTCAGTGCtgt < 1:18111737/35‑1 (MQ=255) tGCGCCTCTTATCAGGCCTACGAGTTCAGTGCtgt < 1:3979784/35‑1 (MQ=255) gcgcGTCTTATCAGGCCTACGAGTTCAGTGCtgtg < 1:13443799/35‑1 (MQ=40) gcgcGTCTTATCAGGCCTACGAGTTCAGTGCtgtg < 1:10811788/35‑1 (MQ=40) cgcgTCTTATCAGGCCTACGAGTTCAGTGCTgtgt < 1:1290317/35‑1 (MQ=38) cgcgTCTTATCAGGCCTACGAGTTCAGTGCTgtgt < 1:6785823/35‑1 (MQ=38) gcgTCTTATCAGGCCTACGAGTTCAGTGCTGTGTa < 1:5201104/35‑1 (MQ=38) cgTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAg < 1:19848381/35‑1 (MQ=38) cgTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAg > 1:19254374/1‑35 (MQ=38) cgTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAg > 1:13284967/1‑35 (MQ=38) cgTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAg > 1:14405514/1‑35 (MQ=38) cgTCATATCAGGCCTACGAGTTCAGTGCTGTTTAg < 1:3179982/35‑1 (MQ=11) agTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAg < 1:4745187/34‑1 (MQ=25) gTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAgg < 1:5889274/35‑1 (MQ=38) gTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAgg > 1:16214977/1‑35 (MQ=38) gTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAgg > 1:12465830/1‑35 (MQ=38) gTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAgg < 1:10059431/35‑1 (MQ=38) tCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGt > 1:10759091/1‑35 (MQ=38) cTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTc < 1:2133263/35‑1 (MQ=38) cTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTc < 1:20508466/35‑1 (MQ=38) cTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTc > 1:8426430/1‑35 (MQ=38) cTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTc > 1:4685222/1‑35 (MQ=38) cTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTc < 1:6646491/35‑1 (MQ=38) ttATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCg > 1:8529048/1‑35 (MQ=38) ttATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCg < 1:9651868/35‑1 (MQ=38) ttATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCg > 1:18508880/1‑35 (MQ=38) tATCAGGCCTACGAGTTCAGTGCTGTGTAGGTctg > 1:5108964/1‑33 (MQ=255) tATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCgg < 1:20581388/35‑1 (MQ=38) aTCAGGCCTACGAGCTCAGTGCTGTGTAGGTCGGa < 1:4602929/35‑1 (MQ=255) tCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGAt > 1:6966488/1‑35 (MQ=38) tCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGAt < 1:6786066/35‑1 (MQ=38) tCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGAt < 1:14863004/35‑1 (MQ=38) tCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGAt < 1:3569699/35‑1 (MQ=38) tCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGAt < 1:19082637/35‑1 (MQ=38) tCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGAt > 1:1688347/1‑35 (MQ=38) tCAGGCCTACGAGTTCAGTGCTGTGTACGGCgggt > 1:14723686/1‑33 (MQ=11) cAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATa < 1:1821554/35‑1 (MQ=38) cAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATa > 1:798471/1‑35 (MQ=38) aGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATaa > 1:4410138/1‑35 (MQ=38) ggCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAg > 1:8365553/1‑35 (MQ=38) gCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAgg < 1:16142886/35‑1 (MQ=38) gCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAgg < 1:8615110/35‑1 (MQ=38) ccTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGc < 1:17119221/35‑1 (MQ=38) ccTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGc > 1:6376258/1‑35 (MQ=38) ccTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGc < 1:93188/35‑1 (MQ=38) ccTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGc > 1:15375486/1‑35 (MQ=38) cTACGAGTTCAGTGCTGTGTATGTCGGGAAAGGCg > 1:12067542/1‑35 (MQ=14) tACGAGTTCAGTGCTGTGTAGGTCGGGTAAGGCGt > 1:3434056/1‑35 (MQ=255) tACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGt < 1:18970380/35‑1 (MQ=38) tACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGt > 1:11863392/1‑35 (MQ=38) tACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGt < 1:11841019/35‑1 (MQ=38) aCGAGTTCAGTGCTGTGTAGGTCGGATAAGGCggt > 1:2819526/1‑33 (MQ=255) aCGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGtt < 1:18871750/35‑1 (MQ=38) aCGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGtt < 1:14089404/35‑1 (MQ=38) aCGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGtt > 1:11499201/1‑35 (MQ=38) aCGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGtt < 1:3587503/35‑1 (MQ=38) | TGATGCGACGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTT > REL606/4467563‑4467628 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |