New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 213184671 (0.690)4 (0.040) 3/46 NT 7.0% coding (848/1053 nt) fbaB fructose‑bisphosphate aldolase
?REL606 2517490 = 38 (0.390)coding (76/864 nt) ypfJ hypothetical protein

GCCTGCAGCACCGCCGGAGTTTATCAACCCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2131812‑2131846
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCCCATAGATGGACCACCAGAGCTGTTGCGCCT  >  REL606/2517490‑2517523
                                                                     
GCCTGCAGCACCGCCGGAGTTTATCAACCCGGCCC                                    >  1:12135044/1‑35
                         AACCCGGCCCCGCCCATAGATGGACCACCAGAGCT           <  1:9533917/35‑1
                          ACCCGGCCCCGCCCATAGATGGACCACCAGAGCTG          <  1:11478054/35‑1
                          ACCCGGCCCCGCCCATAGATGGACCACCAGAGCTG          <  1:8847089/35‑1
                           CCCGGCCCCGCCCATAGATGGACCACCAGAGCTGT         <  1:6092893/35‑1
                              GGCCCCGCCCATAGATGGACCACCAGAGCTGTTGC      <  1:1909173/35‑1
                              GGCCCCGCCCATAGATGGACCACCAGAGCTGTTGC      <  1:20179815/35‑1
                              GGCCCCGCCCATAGATGGACCACCAGAGCTGTTGC      <  1:20403071/35‑1
                               ggCCCGCCCATAGATGGACCACCAGAGCTGTTGCG     <  1:271233/33‑1
                                CCCCGCCCATAGATGGACCACCAGAGCTGTTGCGC    <  1:19893074/35‑1
                                 CCCGCCCATAGATGGACCACCAGAGCTGTTGCGCC   <  1:11257680/35‑1
                                 CCCGCCCATAGATGGACCACCAGAGCTGTTGCGCC   <  1:11400163/35‑1
                                  CCGCCCATAGATGGACCACCAGAGCTGTTGCGCCT  <  1:2661434/35‑1
                                  CCGCCCATAGATGGACCACCAGAGCTGTTGCGCCT  >  1:6091900/1‑35
                                                                     
GCCTGCAGCACCGCCGGAGTTTATCAACCCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2131812‑2131846
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCCCATAGATGGACCACCAGAGCTGTTGCGCCT  >  REL606/2517490‑2517523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.