New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 489053 = | 105 (1.020) | 9 (0.100) | 5/42 | NT | 12.3% | coding (303/780 nt) | ybbM | predicted inner membrane protein |
? | REL606 | 3821518 = | 37 (0.410) | coding (910/1323 nt) | glvG | predicted 6‑phospho‑beta‑glucosidase |
TTCCAGCTTGCCCGCCGCTGAATTTCCTGCCGCCGTAATGGCGCGGCAAGCATCGAAAACCTGTTTC > REL606/3821486‑3821552 | ttCCAGCTTGCCCGCCGCTGAATTTCCTGccgccg > 1:15236285/1‑35 (MQ=255) ttCCAGCTTGCCCGCCGCTGAATTTCCTGccgccg > 1:16356149/1‑35 (MQ=255) ttCCAGCTTGCCCGCCGCTGAATTTCCTGccgccg > 1:5616150/1‑35 (MQ=255) tCCAGCTTGCCCGCCGCTGAATTTCCTGCCGCCGt > 1:7719115/1‑35 (MQ=255) ccAGCTTGCCCGCCGCTGAATTTCCTGCCGCCGTa > 1:668882/1‑35 (MQ=255) ccAGCTTGCCCGCCGCTGAATTTCCTGCCGCCGTa > 1:19879993/1‑35 (MQ=255) gCTTGCCCGCCGCTGAATTTCCTGCCGCCGTAATg > 1:6316611/1‑35 (MQ=255) gCTTGCCCGCCGCTGAATTTCCTGCCGCCGTAATg > 1:2706273/1‑35 (MQ=255) cTTGCCCGCCGCTGAATTTCCTGCCGCCGTAATgg > 1:9093535/1‑35 (MQ=255) cTTGCCCGCCGCTGAATTTCCTGCCGCCGTAATgg > 1:645605/1‑35 (MQ=255) cTTGCCCGCCGCTGAATTTCCTGCCGCCGTAATgg > 1:2832241/1‑35 (MQ=255) ttGCCCGCCGCTGAATTTCCTGCCGCCGTAATGgc > 1:10596382/1‑35 (MQ=255) ttGCCCGCCGCTGAATTTCCTGCCGCCGTAATGgc > 1:12075110/1‑35 (MQ=255) ttGCCCGCCGCTGAATTTCCTGCCGCCGTAATGgc > 1:376270/1‑35 (MQ=255) ttGCCCGCCGCTGAATTTCCTGCCGCCGTAATGgc > 1:15578731/1‑35 (MQ=255) gCCCGCCGCTGAATTTCCTGCCGCCGTAATGgcgc > 1:7738938/1‑35 (MQ=255) gCCCGCCGCTGAATTTCCTGCCGCCGTAATGgcgc > 1:15131051/1‑35 (MQ=255) gCCCGCCGCTGAATTTCCTGCCGCCGTAATCgcgc > 1:15910579/1‑35 (MQ=255) cccGCCGCTGAATTTCCTGCCGCCGTAATGGcgcg > 1:9302295/1‑35 (MQ=255) cgccgcTGAATTTCCTGCCGCCGTAATGGCGCggg > 1:5952503/1‑34 (MQ=255) cgccgcTGAATTTCCTGCCGCCGTAATGGCGCGGc > 1:20494898/1‑35 (MQ=255) cgccgcTGAATTTCCTGCCGCCGTAATGGCGCGGc > 1:20540922/1‑35 (MQ=255) cgccgcTGAATTTCCTGCCGCCGTAATGGCGCGGc > 1:781569/1‑35 (MQ=255) cgccgcTGAATTTCCTGCCGCCGTAATGGCGCGGc > 1:433320/1‑35 (MQ=255) gccgcTGAATTTCCTGCCGCCGTAATGGCGCgggc > 1:2736927/1‑33 (MQ=255) gccgcTGAATTTCCTGCCGCCGTAATGGCGCGGCa > 1:1534045/1‑35 (MQ=255) gccgcTGAATTTCCTGCCGCCGTAATGGCGCGGCa > 1:3997148/1‑35 (MQ=255) ccgcTGATTTCCCCCCCGCCGTAATGGCGCGGCaa < 1:14386235/35‑1 (MQ=16) ccgcTGAATTTCCTGCCGCCGTAATGGCGCGGcca > 1:8017091/1‑33 (MQ=255) ccgcTGAATTTCCTGCCGCCGTAATGGCGCGGCaa > 1:6734780/1‑35 (MQ=255) cTGAATTTCCTGCCGCCGTAATGGCGCGGGAAGCa > 1:3331200/1‑35 (MQ=255) cTGAATTTCCTGCCGCCGTAATGGCGCGGCAAGCa > 1:19342660/1‑35 (MQ=255) taattccccccccgCCGTAATGGCGCGGCAAGCAt < 1:3095416‑M2/21‑1 (MQ=255) tGAATTTCCTGCCGCCGTAATGGCGCGGCAAGCAt > 1:2639635/1‑35 (MQ=255) gattccccccccgCCGTAATGGCGCGGCAAGCATc < 1:13237232‑M2/22‑1 (MQ=255) gAATTTCCTGCCGCCGTAATGGCGCGGGGAGCATc > 1:17486661/1‑35 (MQ=38) gAATTTCCTGCCGCCGTAATGGCGCGGCAAGCATc > 1:16370452/1‑35 (MQ=255) aattccccccccgCCGTAATGGCGCGGCAAGCATc < 1:12169796‑M2/22‑1 (MQ=255) aattccccccccgCCGTAATGGCGCGGCAAGCATc < 1:20547457‑M2/22‑1 (MQ=255) aattccccccccgCCGTAATGGCGCGGCAAGCATc < 1:13248822‑M2/22‑1 (MQ=255) attccccccccgCCGTAATGGCGCGGCAAGCATCg < 1:1455997‑M2/23‑1 (MQ=255) aaTTTCCTGCCGCCGTAATGGCGCGGCAAGCATCg > 1:13055963/1‑35 (MQ=255) aTTTCCTGCCGCCGTAATGGCGCGGCAAGCATCGa > 1:15630940/1‑35 (MQ=255) tttCCTGCCGCCGTAATGGCGCGGCAAGCATCGaa > 1:19233045/1‑35 (MQ=255) tttCCTGCCGCCGTAATGGCGCGGCAAGCATCGaa > 1:3700368/1‑35 (MQ=255) tttCCTGCCGCCGTAATGGCGCGGCAAGCATCGaa > 1:5042054/1‑35 (MQ=255) tttCCTGCCGCCGTAATGGCGCGGCAAGCATCGaa > 1:11687842/1‑35 (MQ=255) tttCCTGCCGCCGTAATGGCGCGGCAAGCATCGaa > 1:1099622/1‑35 (MQ=255) tccccccccgCCGTAATGGCGCGGCAAGCATCGaa < 1:7494670‑M2/25‑1 (MQ=255) tccccccccgCCGTAATGGCGCGGCAAGCATCGaa < 1:7860572‑M2/25‑1 (MQ=255) ttCCTGCCGCCGTAATGGCGCGGCAAGCATCGaaa > 1:13394661/1‑35 (MQ=255) ccccccccgCCGTAATGGCGCGGCAAGCATCGaaa < 1:10013434‑M2/26‑1 (MQ=255) tCCTGCCGCCGTAATGGCGCGGCAAGCATCGaaaa > 1:2299378/1‑35 (MQ=255) cccccccgCCGTAATGGCGCGGCAAGCATCGaaaa < 1:20534220‑M2/27‑1 (MQ=255) cccTCCCGCCGTAATGGCGCGGCAAGCATCGaaaa < 1:23528/34‑1 (MQ=255) ccggccgccGTAATGGCGCGGCAAGCATCGAAAAc < 1:2000440/32‑1 (MQ=255) cccgccgccGTAATGGCGCGGCAAGCATCGAAAAc < 1:8167575/32‑1 (MQ=255) ccccccgCCGTAATGGCGCGGCAAGCATCGAAAAc < 1:10213543‑M2/28‑1 (MQ=255) ccTGCCGCCGTAATGGCGCGGCAAGCATCGAAAAc > 1:8505165/1‑35 (MQ=255) ccTGCCGCCGTAATGGCGCGGCAAGCATCGAAAAc > 1:1692311/1‑35 (MQ=255) cTGCCGCCGTAATGGCGCGGCAAGCATCGAAAAcc > 1:14764207/1‑35 (MQ=255) tGCCGCCGTAATGGCGCGGCAAGCATCGGAAAACt > 1:17811058/1‑35 (MQ=37) tGCCGCCGTAATGGCGCGGCAAGCATCGAAAACCt > 1:8709191/1‑35 (MQ=255) ccccgCGGTAATGGCGCGGCAAGCATCGAAAACCt < 1:31212‑M2/30‑1 (MQ=255) ccccgCCGTAATGGCGCGGCAAGCATCGAAAACCt < 1:16937886‑M2/30‑1 (MQ=255) cccgCCGTAATGGCGCGGCAAGCATCGAAAACCTg < 1:13773897‑M2/31‑1 (MQ=255) cccgCCGTAATGGCGCGGCAAGCATCGAAAACCTg < 1:13874827‑M2/31‑1 (MQ=255) ccgCCGTAATGGCGCGGCAAGCATCGAAAACCTGt < 1:973767‑M2/32‑1 (MQ=255) ccgCCGTAATGGCGCGGCAAGCATCGAAAACCTGt > 1:19955703‑M2/4‑35 (MQ=255) ccgCCGTAATGGCGCGGCAAGCATCGAAAACCTGt < 1:10315180‑M2/32‑1 (MQ=255) ccgCCGTAATGGCGCGGCAAGCATCGAAAACCTGt < 1:11829027‑M2/32‑1 (MQ=255) ccgCCGTAATGGCGCGGCAAGCATCGAAAACCTGt < 1:13990610‑M2/32‑1 (MQ=255) ccgCCGTAATGGCGCGGCAAGCATCGAAAACCTGt < 1:16862658‑M2/32‑1 (MQ=255) ccgCCGTAATGGCGCGGCAAGCATCGAAAAACTGt < 1:17421930‑M2/32‑1 (MQ=255) ccgCCATAATGGCGCGGCAAGCATCGAAAACCTGt < 1:15458846‑M2/32‑1 (MQ=255) cgCCGTAATGGCGCGGGAAGCATCGAAAACCTGtt < 1:874617‑M2/33‑1 (MQ=255) cgCCGTAATGGCGCGGCAAGCATCGAAAACCTGtt < 1:3615632‑M2/33‑1 (MQ=255) cgCCGTAATGGCGCGGCAAGCATCGAAAACCTGtt > 1:4189194‑M2/3‑35 (MQ=255) cgCCGTAATGGCGCGGCAAGCATCGAAAACCTGtt > 1:4280988‑M2/3‑35 (MQ=255) cgCCGTAATGGCGCGGCAAGCATCGAAAACCTGtt < 1:10611718‑M2/33‑1 (MQ=255) gCCTTAATGGCGCGGCAAGCATCGAAAACCTGttt > 1:17753476‑M2/2‑35 (MQ=255) gCCGTAATGGCGCGGCAAGCATCGAAAACCTGttt < 1:19344116‑M2/34‑1 (MQ=255) gCCGTAATGGCGCGGCAAGCATCGAAAACCTGttt > 1:18341404‑M2/2‑35 (MQ=255) ccgTAATGGCGCGGCGAGCATCGAAAACCTGTTtc > 1:7880661/1‑35 (MQ=255) ccgTAATGGCGCGGCAAGCATCGAAAACCTGTTtc < 1:7954993/35‑1 (MQ=255) ccgTAATGGCGCGGCAAGCATCGAAAACCTGTTtc > 1:10403181/1‑35 (MQ=255) ccgTAATGGCGCGGCAAGCATCGAAAACCTGTTtc > 1:17743892/1‑35 (MQ=255) ccgTAATGGCGCGGCAAGCATCGAAAACCTGTTtc < 1:10941106/35‑1 (MQ=255) ccgTAATGGCGCGGCAAGCATCGAAAACCTGTTtc < 1:7656516/35‑1 (MQ=255) ccgTAATGGCGCGGAAAGCATCGAAAACCTGTTtc < 1:566307/35‑1 (MQ=255) | TTCCAGCTTGCCCGCCGCTGAATTTCCTGCCGCCGTAATGGCGCGGCAAGCATCGAAAACCTGTTTC > REL606/3821486‑3821552 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |