New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1332666 = | 72 (0.700) | 5 (0.060) | 4/36 | NT | 7.6% | coding (440/975 nt) | cysB | DNA‑binding transcriptional dual regulator, O‑acetyl‑L‑serine‑binding |
? | REL606 | = 4432999 | 68 (0.880) | intergenic (‑97/‑213) | ppa/ytfQ | inorganic pyrophosphatase/predicted sugar transporter subunit: periplasmic‑binding component of ABC superfamily |
Only 100 of 162 total aligned reads displayed.
GATGCCGTCTCTAAAGGCAATGCTGATTTCGCTATCGCCACAGAAGCGCTGCATCTGTATGAAGATTTA > REL606/1332632‑1332700 | tgtcttcgcttgttttcgtcttcattttccttttt > 1:5011474‑M1/35‑35 (MQ=255) gATGCCGTCTCTAAAGGCAATGCTGATTTCGCTAt < 1:12469433/35‑1 (MQ=255) gtcttcgcttgttttcgtcttcattttccttttTc > 1:6169422‑M1/34‑35 (MQ=255) gtcttcgcttgttttcgtcttcattttccttttTc < 1:8045780‑M1/2‑1 (MQ=255) gtcttcgcttgttttcgtcttcattttccttttTc < 1:1421305‑M1/2‑1 (MQ=255) gtcttcgcttgttttcgtcttcattttccttttTc > 1:5241325‑M1/34‑35 (MQ=255) gtcttcgcttgttttcgtcttcattttccttttTc > 1:2894191‑M1/34‑35 (MQ=255) gtcttcgcttgttttcgtcttcattttcattttTc > 1:12422934‑M1/34‑35 (MQ=255) aTGCCGTCTCTAAAGGCAATGCTGATTTCGCTAtg < 1:1721402/35‑2 (MQ=255) aTGCCGTCTCTAAAGGCAATGCTGATTTCGCTATc > 1:9227358/1‑35 (MQ=255) aTGCCGTCTCTAAAGGCAATGCTGATTTCGCTATc > 1:15864772/1‑35 (MQ=255) aTGCCGTCTCTAAAGGCAATGCTGATTTCGCTATc < 1:15514169/35‑1 (MQ=255) aTGCCGTCTCTAAAGGCAATGCTGATTTCGCTATc < 1:5326865/35‑1 (MQ=255) aTGCCGTCTCTAAAGGCAATGCTGATTTCGCTATc < 1:13199001/35‑1 (MQ=255) tcttcgcttgttttcgtcttcattttccttttTCg > 1:16864209‑M1/33‑35 (MQ=255) tGCCGTCTCTAAAGGCAATGCTGATTTCGCTATCg < 1:3607868/35‑1 (MQ=255) tGCCGTCTCTAAAGGCAATGCTGATTTCGCTATCg < 1:12137541/35‑1 (MQ=255) tGCCGTCTCTAAAGGCAATGCTGATTTCGCTATCg < 1:11916692/35‑1 (MQ=255) gcccGTCTCTAAAGGCAATGCTTATTTCGCTATCg < 1:5604643/33‑1 (MQ=38) gCCGTCTCTAAAGGCAATGCTGATTTCGCTATCGc < 1:12785156/35‑1 (MQ=255) gCCGTCTCTAAAGGCAATGCTGATTTCGCTATCGc < 1:17148893/35‑1 (MQ=255) gCCGTCTCTAAAGGCAATGCTGATTTCGCTATCGc < 1:5620990/35‑1 (MQ=255) cttcgcttgttttcgtcttcattttccttttTCGc > 1:19952737‑M1/32‑35 (MQ=255) attcgcttgttttcgtcttcattttccttttTCGc > 1:16272669‑M1/32‑35 (MQ=255) ttcgcttgttttcgtcttcattttccttttTCGcc < 1:6268450‑M1/5‑1 (MQ=255) ttcgcttgttttcgtcttcattttccttttTCGcc > 1:14906554‑M1/31‑35 (MQ=255) ttcgcttgttttcgtcttcattttccttttTCGcc > 1:10245122‑M1/31‑35 (MQ=255) ccGTCTCTAAAGGCAATGCTGATTTCGCTATCGcc < 1:5438883/35‑1 (MQ=255) ccGTCTCTAAAGGCAATGCTGATTTCGCTATCGcc < 1:9601932/35‑1 (MQ=255) tcgcttgttttcgtcttcattttccttttTCGCca > 1:16719874‑M1/30‑35 (MQ=255) tcgcttgttttcgtcttcattttccttttTCGCca < 1:1534831‑M1/6‑1 (MQ=255) tcgcttgttttcgtcttcattttccttttTCGCca > 1:1967099‑M1/30‑35 (MQ=255) tcgcttgttttcgtcttcattttccttttTCGCca < 1:6850604‑M1/6‑1 (MQ=255) cGTCTCTAAAGGCAATGCTGATTTCGCTATCGTca > 1:4405251/1‑35 (MQ=255) cGTCTCTAAAGGCAATGCTGATTTCGCTATCGCca > 1:8830112/1‑35 (MQ=255) cGTCTCTAAAGGCAATGCTGATTTCGCTATCGCca < 1:3838590/35‑1 (MQ=255) cGTCTCTAAAGGCAATGCTGATTTCGCTATCGCca < 1:9740218/35‑1 (MQ=255) gTCTCTAAAGGCAATGCTGATTTCGCTATCGCcac > 1:6959200/1‑35 (MQ=255) gTCTCTAAAGGCAATGCTGATTTCGCTATCGCcac > 1:3123832/1‑35 (MQ=255) tctcTAAAGGCAATGCTGATTTCGCTATTGCcaca < 1:20597054/35‑1 (MQ=255) tctcTAAAGGCAATGCTGATTTCGCTATCGCcaca > 1:12069197/1‑35 (MQ=255) ctctAAAGGCAATGCTGATTTCGCTATCGCCACAg > 1:9117928/1‑35 (MQ=255) tctAAAGGCAATGCTGATTTCGCTATCGCCACAGa > 1:13588842/1‑35 (MQ=255) tctAAAGGCAATGCTGATTTCGCTATCGCCACAGa > 1:3927622/1‑35 (MQ=255) tctAAAGGCAATGCTGATTTCGCTATCGCCACAGa > 1:7880740/1‑35 (MQ=255) tctAAAGGCAATGCTGATTTCGCTATCGCCACAGa > 1:16093089/1‑35 (MQ=255) ctAAAGGCAATGCTGATTTCGCTATCGCCACAGaa > 1:8224385/1‑35 (MQ=255) tAAAGGCAATGCTGATTTCGCTATCGCCACAGAAg > 1:18717265/1‑35 (MQ=255) tAAAGGCAATGCTGATTTCGCTATCGCCACAGAAg > 1:16047453/1‑35 (MQ=255) aaaGGCAATGCTGATTTCGCTATCGCCACAGAAgc > 1:14086582/1‑35 (MQ=255) aaaGGCAATGCTGATTTCGCTATCGCCACAGAAgc > 1:1221471/1‑35 (MQ=255) aaaGGCAATGCTGATTTCGCTATCGCCACAGAAgc > 1:9314369/1‑35 (MQ=255) aaaGGCAATGCTGATTTCGCTATCGCCACAGAAgc > 1:4426938/1‑35 (MQ=255) aaGGCAATGCTGATTTCGCTATCGCCACATAAgcg > 1:14395285/1‑35 (MQ=255) aaGGCAATGCTGATTTCGCTATCGCCACAGAAgcg > 1:14965178/1‑35 (MQ=255) aaGGCAATGCTGATTTCGCTATCGCCACAGAAgcg > 1:3374987/1‑35 (MQ=255) aGGCAATGCTGATTTCGCTATCGCCACAGAAgcgc > 1:2563272/1‑35 (MQ=255) ggCAATGCTGATTTCGCTATCGCCACAGAAGCGCt > 1:18347435/1‑35 (MQ=255) cAATGCTGATTTCGCTATCGCCACAGAAGCGCTGc > 1:2031790/1‑35 (MQ=255) cAATGCTGATTTCGCTATCGCCACAGAAGCGCTGc > 1:15143847/1‑35 (MQ=255) aaTGCTGATTTCGCTATCGCCACAGAAGCGCTGCa > 1:6573055/1‑35 (MQ=255) aaTGCTGATTTCGCTATCGCCACAGAAGCGCTGCa > 1:12081750/1‑35 (MQ=255) ttctttttccttttTCGCCACAGAAGCGCTGCATc > 1:7121480‑M1/15‑35 (MQ=255) tGCTGATTTCGCTATCGCCACAGAAGCGCTGCATc > 1:10720871/1‑35 (MQ=255) gCTGATTTCGCTATCGCCACAGAAGCGCTGCATCt > 1:11939217/1‑35 (MQ=255) gCTGATTTCGCTATCGCCACAGAAGCGCTGCATCt > 1:16903682/1‑35 (MQ=255) gCTGATTTCGCTATCGCCACAGAAGCGCTGCATCt > 1:10813431/1‑35 (MQ=255) gCTGATTTCGCTATCGCCACAGAAGCGCTGCATCt > 1:6294008/1‑35 (MQ=255) gCTGATTTCGCTATCGCCACAGAAGCGCTGCATCt > 1:7207737/1‑35 (MQ=255) cTGATTTCGCTATCGCCACAGAAGCGCTGCATCTg > 1:6496790/1‑35 (MQ=255) gATTTCGCTATCGCCACAGAAGCGCTGCATCTGTa > 1:779358/1‑35 (MQ=255) ttttCGTTTTCGCCACAGAAGCGCTGCATCTGTAt < 1:20447631/34‑1 (MQ=25) tttCGCTATCGCCACAGAAGCGCTGCATCTGTATg > 1:2520028/1‑35 (MQ=255) ttccttttTCGCCACAGAAGCGCTGCATCTGTATg > 1:8680838‑M1/9‑35 (MQ=255) ttccgtttTCGCCACAGAAGCGCTGCATCTGTATg > 1:12877139‑M1/9‑35 (MQ=255) ttCGTTTTCGCCACAGAAGCGCTGCATCTGTATGa < 1:7047617/35‑1 (MQ=37) ttCGTTATCGCCACAGAAGCGCTGCATCTGTATGa < 1:11382289/35‑1 (MQ=255) tccgtttTCGCCACAGAAGCGCTGCATCTGTATGa > 1:17768240‑M1/8‑35 (MQ=255) tCGTTATCGCCACAGAAGCGCTGCATCTGTATGaa < 1:10447551/35‑1 (MQ=255) ccgtttTCGCCACAGAAGCGCTGCATCTGTATGaa > 1:8456915‑M1/7‑35 (MQ=255) cgttATCGCCACAGAAGCGCTGCATCTGTATGAAg < 1:1578749/32‑1 (MQ=255) cGCTATCGCCACAGAAGCGCTGCATCTGTATGAAg > 1:9795487/1‑35 (MQ=255) cGCTATCGCCACAGAAGCGCTGCATCTGTATGAAg > 1:16738344/1‑35 (MQ=255) gCTATCGCCACAGAAGCGCTGCATCTGTATGAAGa > 1:7281472/1‑35 (MQ=255) gCTATCGCCACAGAAGCGCTGCATCTGTATGAAGa > 1:18382847/1‑35 (MQ=255) tttTCGCCACAGAAGCGCTGCATCTGTATGAAGAt > 1:14715296‑M1/4‑35 (MQ=255) cTATCGCCACAGAAGCGCTGCATCTGTATGAAGAt > 1:3369416/1‑35 (MQ=255) cTATCGCAACAGAAGCGCTGCATCTGTATGAAGAt < 1:19034398/35‑1 (MQ=255) tATCGCCACAGAAGCGCTGCATCTGTATGAAGAtt > 1:18954915/1‑35 (MQ=255) tTCGCCACAGAAGCGCTGCATCTGTATGAAGAttt > 1:17214944‑M1/2‑35 (MQ=255) tTCGCCACAGAAGCGCTGCATCTGTATGAAGAttt > 1:17476967‑M1/2‑35 (MQ=255) aTCGCCACAGAAGCGCTGCATCTGTATGAAGAttt > 1:11007184/1‑35 (MQ=255) aTCGCCACAGAAGCGCTGCATCTGTATGAAGAttt > 1:14896010/1‑35 (MQ=255) aTCGCCACAGAAGCGCTGCATCTGTATGAAGAttt > 1:17925957/1‑35 (MQ=255) aTCGCCACAGAAGCGCTGCATCTGTATGAAGAttt > 1:19901753/1‑35 (MQ=255) aTCGCCACAGAAGCGCTGCATCTGTATGAAGAttt > 1:2837391/1‑35 (MQ=255) aTCGCCACAGAAGCGCTGCATCTGTATGAAGAttt > 1:7619041/1‑35 (MQ=255) aTCGCCACAGAAGCGCTGCATCTGTATGAAGAttt > 1:4577066/1‑35 (MQ=255) TCGCCACAGAAGCGCTGCATCTGTATGAAGATTTa > 1:1151521‑M1/1‑35 (MQ=255) TCGCCACAGAAGCGCTGCATCTGTATGAAGATTTa > 1:5434526‑M1/1‑35 (MQ=255) | GATGCCGTCTCTAAAGGCAATGCTGATTTCGCTATCGCCACAGAAGCGCTGCATCTGTATGAAGATTTA > REL606/1332632‑1332700 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |