New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 924276 = | 93 (0.910) | 10 (0.100) | 3/46 | NT | 12.3% | coding (714/1431 nt) | ybjT | conserved protein with NAD(P)‑binding Rossmann‑fold domain |
? | REL606 | = 1365457 | 53 (0.540) | coding (824/978 nt) | pspF | DNA‑binding transcriptional activator |
Only 100 of 219 total aligned reads displayed.
TCACATTGAGAAACCACACCGAAATCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTAC > REL606/924242‑924310 | tgttttttcaggtcgatagcctgcaaCAGCGGGTg < 1:8685552‑M1/9‑1 (MQ=255) tgctgcatctgaaactcacgtaaatccagcggcag > 1:6517882‑M1/35‑35 (MQ=255) tgctgcatctgaaactcacgtaaatccagcggcag > 1:2105873‑M1/35‑35 (MQ=255) tCACATTGAGAAACCACACCGAAATCCAGCGGGTg > 1:9799450/1‑35 (MQ=255) tCACATTGAGAAACCACACCGAAATCCAGCGGGTg > 1:16490352/1‑35 (MQ=255) tCACATTGAGAAACCACACCGAAATCCAGCGGGTg < 1:10027844/35‑1 (MQ=255) cgagcaaggccgtctgcgtgttggtgCAGGGGGTg < 1:13054510‑M1/9‑1 (MQ=255) cgagcaaggccgtctgcgtgttggtgCAGCGGGTg < 1:3516559‑M1/9‑1 (MQ=255) gttttttcaggtcgatagcctgcaaCAGCGGGTgg < 1:9119237‑M1/10‑1 (MQ=255) gctgcatctgaaactcacgtaaatccagcggcagg < 1:10567469‑M1/2‑1 (MQ=255) gagcaaggccgtctgcgtgttggtgCAGCGGGTgg < 1:15060910‑M1/10‑1 (MQ=255) cacaTTGAGAAACCACACCGAAATCCAGCGGGTgg > 1:9270563/1‑35 (MQ=255) ttttttcaggtcgatagcctgcaaCAGCGGCTggg < 1:16784976‑M1/11‑1 (MQ=255) gtcggcctgatgaatttgccgtagCAGCGGGTggg < 1:3206408‑M1/11‑1 (MQ=255) gtcggcctgatgaatttgccgtagCAGCGGGGggg < 1:4885443‑M1/11‑1 (MQ=255) ctgcatctgaaactcacgtaaatccagcggcaggg < 1:4242041‑M1/3‑1 (MQ=255) acaTTGAGAAACCACACCGAAATCCAGCGGGTggg < 1:11594694/35‑1 (MQ=255) tttttcaggtcgatagcctgcaaCAGCGGGTgggg < 1:6791967‑M1/12‑1 (MQ=255) tcggcctgatgaatttgccgtagCAGCGGGCgggg < 1:1479523‑M1/12‑1 (MQ=255) tacatctgaaactcacgtaaatccagcggcagggg < 1:4813469‑M1/4‑1 (MQ=255) gcaagtccgtctgcgtgttggtgCAGCGGGTgggg < 1:11401794‑M1/12‑1 (MQ=255) caTTGAGAAACCACACCGAAATCCAGCGGGTgggg > 1:11288141/1‑35 (MQ=255) atttGAGAAACCACACCGAAATCCAGCGGGTgggg < 1:11826340/33‑1 (MQ=255) ttttcaggtcgatagcctgcaaCAGCGGGtggggg < 1:2718463‑M1/13‑2 (MQ=255) gcatctgaaactcacgtaaatccagcggcaggggg < 1:6607796‑M1/5‑2 (MQ=255) gcatctgaaactcacgtaaatccagcggcaggggg < 1:2511394‑M1/5‑2 (MQ=255) cggcctgatgaatttgccgtagCAGCGGGtggggg < 1:14018094‑M1/13‑2 (MQ=255) cggcctgatgaatttgccgtagCAGCGGGtggggg < 1:12571008‑M1/13‑2 (MQ=255) aTTGAGAAACCACACCGAAATCCAGCGGGTGGGGa < 1:14237191/35‑1 (MQ=255) aTTGAGAAACCACACCGAAATCCAGCGGGTGGGGa > 1:7674932/1‑35 (MQ=255) aTTGAGAAACCACACCGAAATCCAGCGGGTGGGGa > 1:310105/1‑35 (MQ=255) aTTGAGAAACCACACCGAAATCCAGCGGGTGGGGa > 1:19832265/1‑35 (MQ=255) ttGAGAAACCACACCGAAATCCAGCGGGTGGGGAg > 1:5405766/1‑35 (MQ=255) ttGAGAAACCACACCGAAATCCAGCGGGTGGGGAg > 1:15905007/1‑35 (MQ=255) ttGAGAAACCACACCGAAATCCAGCGGGCGGGGAg > 1:13069049/1‑35 (MQ=255) ggcctgatgaatttgccgtagCAGCGGgtgggggg < 1:2584000‑M1/14‑3 (MQ=255) tGAGAAACCACACCGAAATCCAGCGGGTGGGGAgg > 1:6051386/1‑35 (MQ=255) tGAGAAACCACACCGAAATCCAGCGGGTGGGGAgg < 1:19705341/35‑1 (MQ=255) tGAGAAACCACACCGAAATCCAGCGGGTGGGGAgg < 1:8026821/35‑1 (MQ=255) tGAGAAACCACACCGAAATCAAGCGGGTGGGGAgg < 1:3913305/35‑1 (MQ=255) gcctgatgaatttgccgtagCAGCGggtggggggg < 1:16142693‑M1/15‑4 (MQ=255) atctgaaactcacgtaaatccagcggcaggggggg < 1:14119579‑M1/7‑4 (MQ=255) aggccgtctgcgtgttggtgCAGCGggtggggcgg < 1:18086626‑M1/15‑4 (MQ=255) tctgaaactcacgtaaatccagcggcagggggggg < 1:19073614‑M1/8‑1 (MQ=255) tctgaaactcacgtaaatccagcggcagggggggg < 1:4453917‑M1/8‑1 (MQ=255) gagaAACCACACCGAAATCCAGCGGGTGGGGAggg < 1:3123831/35‑1 (MQ=255) gagaAACCACACCGAAATCCAGCGGGTGGGGAggg > 1:10812087/1‑35 (MQ=255) gagaAACCACACCGAAATCCAGCGGGTGGGGAggg > 1:16457697/1‑35 (MQ=255) ctgaaactcacgtaaatccagcggcaggggggggg < 1:14561847‑M1/9‑1 (MQ=255) caggtcgatagcctgcaaCAGCGGGTGGGGGgggg < 1:5784655‑M1/17‑1 (MQ=255) agaAACCACACCGAAATCCAGCGGGTGGGGAgggg < 1:7400466/35‑1 (MQ=255) tgaaactcacgtaaatccagcggcaGGGGGggggg < 1:13459544‑M1/10‑1 (MQ=255) gaAACCACACCGAAATCCAGCGGGTGGGGAggggg > 1:5628438/1‑35 (MQ=255) ccgtctgcgtgttggtgCAGCGGGTGGGGCggggg < 1:16179321‑M1/18‑1 (MQ=255) aaaCCACACCGAAATCCAGCTGGTGGGGAGgggga > 1:14834241/1‑35 (MQ=255) aaaCCACACCGAAATCCAGCGGGTGGGGAGgggga > 1:2991347/1‑35 (MQ=255) aaaCCACACCGAAATCCAGCGGGTGGGGAGgggga > 1:8329016/1‑35 (MQ=255) aaaCCACACCGAAATCCAGCGGGTGGGGAGgggga > 1:9362919/1‑35 (MQ=255) aaaCCACACCGAAATCCAGCGGGTGGGGAGgggga < 1:12952816/35‑1 (MQ=255) aaCCACACCGAAATCCAGCGGGTGGGGAGggggat > 1:9701470/1‑35 (MQ=255) aCCACACCGAAATCCAGCGGGTGGGGAGggggatg < 1:5324040/35‑1 (MQ=255) aCCACACCGAAATCCAGCGGGTGGGGAGggggatg > 1:8273181/1‑35 (MQ=255) ccACACCGAAATCCAGCGGGTGGGGAGggggatgg < 1:16872874/35‑1 (MQ=255) ccACACCGAAATCCAGCGGGTGGGGAGggggatgg < 1:18514231/35‑1 (MQ=255) acacCGAAATCCAGCGGGTGGGGAGggggatgggg < 1:3180820/35‑1 (MQ=255) acacCGAAATCCAGCGGGTGGGGAGggggatgggg > 1:1624157/1‑35 (MQ=255) cacCGAAATCCAGCGGGTGGGGAGggggatgggga < 1:16629486/35‑1 (MQ=255) cacCGAAATCCAGCGGGTGGGGAGggggatgggga < 1:1992328/35‑1 (MQ=255) acCGAAATCCAGCGGGTGGGGCGggggatggggat > 1:9032849/1‑35 (MQ=255) acCGAAATCCAGCGGGTGGGGAGggggatggggat < 1:9447905/35‑1 (MQ=255) ccGAAATCCAGCGGGTGGGGAGGGGGGTGGGGATc < 1:12012110/35‑1 (MQ=255) ccGAAATCCAGCGGGTGGGGAGGGGGATGTGGATc > 1:8919581/1‑35 (MQ=255) ccGAAATCCAGCGGGTGGGGAGGGGGATGGGGATc > 1:19340414/1‑35 (MQ=255) ccGAAATCCAGCGGGTGGGGAGGGGGATGGGGATc < 1:17748258/35‑1 (MQ=255) cGAAATCCAGCGGGTGGGGAGGGGGATGGGGATCa > 1:15403418/1‑35 (MQ=255) cGAAATCCAGCGGGTGGGGAGGGGGATGGGGATCa > 1:1744872/1‑35 (MQ=255) gAAATCCAGCGGGTGGGGAGGGGGATGGGGATCaa < 1:7984693/35‑1 (MQ=255) gAAATCCAGCGGGTGGGGAGGGGGATGGGGATCaa < 1:1100836/35‑1 (MQ=255) gAAATCCAGCGGGTGGGGAGGGGGATGGGGATCaa > 1:11495630/1‑35 (MQ=255) gAAATCCAGCGGGTGGGGAGGGGGATGGGGATCaa < 1:5698409/35‑1 (MQ=255) gAAATCCAGCGGGTGGGGAGGGGGATGGGGATCaa > 1:2477400/1‑35 (MQ=255) gAAATCCAGCGGGTGGGGAGGGGGATGGGGATCaa > 1:15837827/1‑35 (MQ=255) aaaTCCAGCGGGTGGGGAGGGGGATGGGGATCAAc < 1:2809098/35‑1 (MQ=255) aaTCCAGCGGGTGGGGAGGGGGATGGGGATCAAcc < 1:1825292/35‑1 (MQ=255) aaTCCAGCGGGTGGGGAGGGGGATGGGGATCAAcc > 1:7161409/1‑35 (MQ=255) aTCCAGCGGGTGGGGAGGGGGATGGGGATCAACCa < 1:5436798/35‑1 (MQ=255) tCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAg > 1:17875728/1‑35 (MQ=255) tCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAg < 1:10317080/35‑1 (MQ=255) tCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAg < 1:3809827/35‑1 (MQ=255) tCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAg < 1:6188992/35‑1 (MQ=255) AGCGGGTGGGGAGGGGGATGGGGATCAACCagcgt < 1:18161341‑M1/35‑2 (MQ=255) AGCGGGTGGGGAGGGGGATGGGGATCAACCAgcgg < 1:6960923‑M1/35‑1 (MQ=255) GCGGGTGGGGAGGGGGATGGGGATCAACCAgcggc > 1:17857781‑M1/1‑35 (MQ=255) GGGTGGGGAGGGGGATGGGGATCAACCAGCGgcgc > 1:14362642‑M1/1‑35 (MQ=255) GGTGGGGAGGTGGATGGGGATCAACCAGCGGCGCt < 1:16758406‑M1/35‑1 (MQ=255) GGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCt > 1:7892919‑M1/1‑35 (MQ=255) GGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCt < 1:4365142‑M1/35‑1 (MQ=255) GGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCt < 1:10435300‑M1/35‑1 (MQ=255) tGGGGAGGGGGATGGGGATCAACCAGCGTCGCTTa > 1:1572724/1‑35 (MQ=255) GGGGAGGGGGATGGGGATCAACCAGCGGCGCTTAc > 1:19633346‑M1/1‑35 (MQ=255) | TCACATTGAGAAACCACACCGAAATCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTAC > REL606/924242‑924310 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |