New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3944627 = | 101 (0.980) | 9 (0.120) | 3/34 | NT | 13.8% | intergenic (+16/‑131) | proM/aslB | tRNA‑Pro/predicted regulator of arylsulfatase activity |
? | REL606 | = 4275759 | 41 (0.560) | coding (189/690 nt) | yjcO | hypothetical protein |
Only 100 of 207 total aligned reads displayed.
AATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCA > REL606/3944593‑3944661 | cgccagcagcgcgcaggcatcagcatcaccgctgt < 1:8115334‑M1/1‑1 (MQ=255) cgccagcagcgcgcaggcatcagcatcaccgctgt < 1:7913655‑M1/1‑1 (MQ=255) gccagcagcgcgcaggcatcagcatcaccgctgTc < 1:9203497‑M1/2‑1 (MQ=255) gccagcagcgcgcaggcatcagcatcaccgctgTc < 1:3578181‑M1/2‑1 (MQ=255) gccagcagcgcgcaggcatcagcatcaccgctgTc < 1:4822544‑M1/2‑1 (MQ=255) aTCCTCTCTCGCCGACCAATTTTGAGCCCCGCTTc < 1:14341826/35‑1 (MQ=255) aTCCTCTCTCGCCGACCAATTTTGAACCCCGCTTc < 1:17022666/35‑1 (MQ=255) aTCCTCTCTCGCCGACCAATTTTGAACCCCGCTTc < 1:18505208/35‑1 (MQ=255) aTCCTCTCTCGCCGACCAATTTTGAACCCCGCTTc < 1:19050958/35‑1 (MQ=255) aTCCTCTCTCGCCGACCAATTTTGAACCCCGCTTc > 1:3104858/1‑35 (MQ=255) aTCCTCTCTCGCCGACCAATTTTGAACCCCGCTTc < 1:3726054/35‑1 (MQ=255) aTCCTCTCTCGCCGACCAATTTTGAACCCCGCTTc < 1:5032296/35‑1 (MQ=255) aTCCTCTCTCGCCGACCAATTTTGAACCCCGCTTc < 1:10950676/35‑1 (MQ=255) aTCCTATCTCGCCGACCAATTTTGAACCCCGCTTc < 1:18447054/35‑1 (MQ=255) tCCTCTCTCGCCGACCAATTTTGAACCCCGCTTcg < 1:11781237/35‑1 (MQ=255) tCCTCTCTCGCCGACCAATTTTGAACCCCGCTTcg < 1:3850029/35‑1 (MQ=255) tCCTCTCTCGCCGACCAATTTTGAACCCCGCTTcg < 1:14611276/35‑1 (MQ=255) tCCTCTCTCGCCGACCAATTTTGAACCCCGCTTcg < 1:19219426/35‑1 (MQ=255) ccagcagcgcgcaggcatcagcatcaccgctgTcg > 1:6007488‑M1/33‑35 (MQ=255) cgccagcgcgcaggcatcagcatcaccgctgTcgg > 1:6548834‑M1/32‑35 (MQ=255) ccTCTCTCGCCGACCAATTTTGAACCCCGCTTcgg < 1:4886010/35‑1 (MQ=255) ccTCTCTCGCCGACCAATTTTGAACCCCGCTTcgg < 1:11978588/35‑1 (MQ=255) ccTCTCTCGCCGACCAATTTTGAACCCCGCTTcgg < 1:1464690/35‑1 (MQ=255) ccTCTCTCGCCGACCAATTTTGAACCCCGCTTcgg < 1:3066696/35‑1 (MQ=255) cagcagcgcgcaggcatcagcatcaccgctgTcgg < 1:10150317‑M1/4‑1 (MQ=255) ctctctCGCCGACCAATTTTGAACCCCGCTTcggc < 1:7370264/35‑1 (MQ=255) ctctctCGCCGACCAATTTTGAACCCCGCTTcggc < 1:2632401/35‑1 (MQ=255) ctctctCGCCGACCAATTTTGAACCCCGCTTaggc < 1:6805361/35‑1 (MQ=255) agcagcgcgcaggcatcagcatcaccgctgTcggc < 1:16218538‑M1/5‑1 (MQ=255) agcagcgcgcaggcatcagcatcaccgctgTcggc > 1:987633‑M1/31‑35 (MQ=255) agcagcgcgcaggcatcagcatcaccgctgTcggc > 1:13538694‑M1/31‑35 (MQ=255) tctctcGCCGACCAATTTTGAACCCCGCTTcggcg > 1:6294047/1‑35 (MQ=255) tctctcGCCGACCAATTTTGAACCCCGCTTcggcg > 1:17722736/1‑35 (MQ=255) cagcgcgcaggcatcagcatcaccgctgTcggcgg < 1:9137551‑M1/7‑1 (MQ=255) cagcgcgcaggcatcagcatcaccgctgTcggcgg < 1:18247608‑M1/7‑1 (MQ=255) tctcGCCGACCAATTTTGAACCCCGCTTCGGCggg < 1:15864223/35‑1 (MQ=255) tctcGCCGACCAATTTTGAACCCCGCTTCGGCggg < 1:11167980/35‑1 (MQ=255) tctcGCCGACCAATTTTGAACCCCGCTTCGGCggg < 1:13114209/35‑1 (MQ=255) tctcGCCGACCAATTTTGAACCCCGCTTCGGCggg > 1:8910107/1‑35 (MQ=255) tctcGCCGACCAATTTTGAACCCCGCTTCGGCggg < 1:6640722/35‑1 (MQ=255) agcgcgcaggcatcagcatcaccgctgTCGGCggg < 1:10252237‑M1/8‑1 (MQ=255) gcgcgcaggcatcagcatcaccgctgTCGGcgggc < 1:19750599‑M1/9‑2 (MQ=255) ctcGCCGACCAATTTTGAACCCCGCTTCGGCgtgg > 1:956289/1‑35 (MQ=255) tcGCCGACCAATTTTGAACCCCGCTTCGGCggggg > 1:9368342/1‑34 (MQ=255) tcGCCGACCAATTTTGAACCCCGCTTCGGCGGGGt < 1:10699162/35‑1 (MQ=255) cgcgcaggcatcagcatcaccgctgTCGGCGGGGt < 1:613562‑M1/10‑1 (MQ=255) gCCGACCAATTTTGAACCCCGCTTCGGCGGGGgtt > 1:14893356/1‑35 (MQ=255) cgcaggcatcagcatcaccgctgTCGGCGGGgttc < 1:7552102‑M1/12‑2 (MQ=255) accGACCAATTTTGAACCCCGCTTCGGCGGGGttt < 1:9101376/34‑1 (MQ=255) gcaggcatcagcatcaccgctgTCGGCGGGGtttt < 1:13050930‑M1/13‑1 (MQ=255) ccGACCAATTTTGAACCCCGCTTCGGCGGGGgttt > 1:4075467/1‑35 (MQ=255) ccGACCAATTTTGAACCCCGCTTCGGCGGGGgttt > 1:13686464/1‑35 (MQ=255) ccGACCAATTTTGAACCCCGCTTCGGCGGGGgttt > 1:3439259/1‑35 (MQ=255) ccGACCAATTTTGAACCCCGCTTCGGCGGGGgttt > 1:20504181/1‑35 (MQ=255) cGACCAATTTTGAACCCCGCTTCGGCGGGGttttt < 1:8966949/35‑1 (MQ=255) gACCAATTTTGAACCCCGCTTCGGCGGGGtttttt < 1:12451686/35‑1 (MQ=255) aggcatcagcatcaccgctgTCGGCGGGGtttttt < 1:6409818‑M1/15‑1 (MQ=255) ccAATTTTGAACCCCGCTTCGGCGGGGGTTTTTGt > 1:15630357/1‑35 (MQ=255) catcagcatcaccgctgTCGGCGgggtttttttgc < 1:11548488‑M1/18‑4 (MQ=255) aaTTTTGAACCCCGCTTCGGCGGGGTTTTTTGttt > 1:10474811/1‑35 (MQ=255) aaTTTTGAACCCCGCTTCGGCGGGGGTTTTTGttt > 1:19697226/1‑35 (MQ=255) aTTTTGAACCCCGCTTCGGCGGGGTTTTTTGtttt < 1:2511209/35‑1 (MQ=255) aTTTTGAACCCCGCTTCGGCGGGGTTTTTTGtttt < 1:19547027/35‑1 (MQ=255) aTTTTGAACCCCGCTTCGGCGGGGTTTTTTGtttt < 1:17474824/35‑1 (MQ=255) aTTTTGAACCCCGCTTCGGCGGGGGTTTTTGtttt > 1:18349241/1‑35 (MQ=255) aTTTTGAACCCCGCTTCGGCGGGGGTTTTTGtttt > 1:5702697/1‑35 (MQ=255) ttttGAACCCCGCTTCGGCGGGGTTTTTTGTTTTc < 1:12185996/35‑1 (MQ=255) ttttGAACCCCGCTTCGGCGGGGGTTTTTGttttt > 1:14240561/1‑34 (MQ=255) ttttGAACCCCGCTTCGGCGGGGGTTTTTGTTTTc > 1:10264906/1‑35 (MQ=255) ttGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCtg < 1:9545075/35‑1 (MQ=255) ttGAACCCCGCTTCGGCGGGGGTTTTTGTTTTCtg > 1:11667603/1‑35 (MQ=255) tGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCtgt > 1:16033795/1‑35 (MQ=255) tGAACCCCGCTTCGGCGGGGGTTTTTGTTTTCtgt > 1:9225146/1‑35 (MQ=255) tGAACCCCGCTTCGGCGGGGGTTTTTGTTTTCtgt > 1:5223075/1‑35 (MQ=255) gAACCCCGCTTCGGCGGGGTTTTTTGTTTTCtgtg < 1:1006140/35‑1 (MQ=255) gAACCCCGCTTCGGCGGGGTTTTTTGTTTTCtgtg < 1:14578369/35‑1 (MQ=255) aCCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCa < 1:5889840/35‑1 (MQ=255) aCCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCa < 1:4216144/35‑1 (MQ=255) aCCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCa < 1:892790/35‑1 (MQ=255) aCCCCGCTTCGGCGGGGGTTTTTGTTTTCTGTGCa > 1:16550496/1‑35 (MQ=255) aCCCCGCTTCGGCGGGGGTTTTTGTTTTCTGTGCa > 1:11233915/1‑35 (MQ=255) aCCCCGCTTCGGCGGGGGTTTTTGTTTTCTGTGCa > 1:12853257/1‑35 (MQ=255) cccGCTTCGGCGGGGTTTTTTGTTTTCTGTGCAtt < 1:19173100/35‑1 (MQ=255) cccGCTTCGGCGGGGGTTTTTGTTTTCTGTGCAtt > 1:202573/1‑35 (MQ=255) cccGCTTCGGCGGGGGTTTTTGTTTTCTGTGCAtt > 1:8622842/1‑35 (MQ=255) ccGCTTCGGCGGGGTTTTTTGTTTTCTGTGCAttt < 1:11421878/35‑1 (MQ=255) ccGCTTCGGCGGGGGTTTTTGTTTTCTGTGCAttt > 1:1799230/1‑35 (MQ=255) cGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTc < 1:2380402/35‑1 (MQ=255) cGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTc < 1:16330651/35‑1 (MQ=255) cGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTc < 1:15317106/35‑1 (MQ=255) cGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTc < 1:1736998/35‑1 (MQ=255) gCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCg < 1:781296/35‑1 (MQ=255) gCTTCGGCGGGGTTTTTTGTTTTATGTGCATTTCg < 1:9003515/35‑1 (MQ=255) cTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGt < 1:9720514/35‑1 (MQ=255) cTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGt < 1:16461498/35‑1 (MQ=255) cTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGt < 1:13843453/35‑1 (MQ=255) cTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGt < 1:13506022/35‑1 (MQ=255) ttCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTc < 1:2848256/35‑1 (MQ=255) TCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCa > 1:16792549‑M1/1‑35 (MQ=255) TCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCa > 1:15503019‑M1/1‑35 (MQ=255) | AATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCA > REL606/3944593‑3944661 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |