New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2900731 | 92 (0.900) | 9 (0.110) | 3/40 | NT | 13.3% | coding (82/771 nt) | yqeC | hypothetical protein |
? | REL606 | 4370910 = | 41 (0.480) | intergenic (+97/+173) | glyY/yjeS | tRNA‑Gly/predicted Fe‑S electron transport protein |
Only 100 of 152 total aligned reads displayed.
GCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAGCACCAACAACAGAAATCACAGTGGGACGTTTCTGC > REL606/2900697‑2900765 | gccagccaAAAAAGCAAGCTGGTTTTCCCCCCAGC < 1:14733318‑M1/35‑1 (MQ=255) agccaAAAAAGCAAGCTTGTTTTCCCCCCAGCAcc > 1:10394809/1‑35 (MQ=255) agccaAAAAAGCAAGCTGGTTTTCCCCCCAGCAcc < 1:16658389/35‑1 (MQ=255) ccaAAAAAGCAAGCTGGTTTTCCCCCCAGCACcaa > 1:4979109/1‑35 (MQ=255) caAAAAAGCAAGCTGGTTTTCCCCCCAGCACcaac > 1:18697466/1‑35 (MQ=255) aaaaaaGCAAGCTGGTTTTCCCCCCAGCACcaaca > 1:17666173/1‑35 (MQ=255) aaaaaaGCAAGCTGGTTTTCCCCCCAGCACcaaca < 1:18427788/35‑1 (MQ=255) aaaaaaGCAAGCTGGTTTTCCCCCCAGCACcaaca > 1:3578188/1‑35 (MQ=255) aaaaaGCAAGCTGGTTTTCCCCCCAGCACcaacaa < 1:14456217/35‑1 (MQ=255) aaaaaGCAAGCTGGTTTTCCCCCCAGCACcaacaa > 1:6670457/1‑35 (MQ=255) aaaaaGCAAGCTGGTTTTCCCCCCAGAACcaacaa < 1:19385378/35‑1 (MQ=255) aaaaGCAAGCTGGTTTTCCCCCCAGCACCaacaac > 1:10237228/1‑35 (MQ=255) aaaaGCAAGCTGGTTTTCCCCCCAGCACCaacaac > 1:6603711/1‑35 (MQ=255) aaaaGCAAGCTGGTTTTCACCCCAGCACCaacaac < 1:15312552/35‑1 (MQ=255) aaaGCAAGCTGGTTTTCCCCCCAGCACCAacaaca > 1:17860715/1‑35 (MQ=255) aaaGCAAGCTGGTTTTCCCCCCAGCACCAacaaca < 1:11669445/35‑1 (MQ=255) aagcaagcTGGTTTTCCCCCCAGCACCAACAACAg < 1:8051691/35‑1 (MQ=255) aagcaagcTGGTTTTCCCCCCAGCACCAACAACAg < 1:3076506/35‑1 (MQ=255) aagcaagcTGGTTTTCCCCCCAGCACCAACAACAg > 1:5329194/1‑35 (MQ=255) aagcaagcTGGTTTTCCCCCCAGCACCAACAACAg > 1:19924041/1‑35 (MQ=255) agcaagcTTGTTTTCCCCCCAGCACCAACAACAGa > 1:15635739/1‑35 (MQ=255) gcaatcTGGTTTTCCCCCCAGCACCAACAACAGaa > 1:6086883/1‑35 (MQ=255) caagcTGGTTTTCCCCCCAGCACCAACAACAGaaa > 1:11510195/1‑35 (MQ=255) aagcTTGTTGTCCCCCCAGCACCAACAACAGAAAt < 1:20243943/35‑1 (MQ=37) aagcTGGTTTTCCCCCCAGCACCAACAACAGAAAt < 1:10194184/35‑1 (MQ=255) aagcTGGTTTTCACCCCAGCACCAACAACAGAAAt < 1:19236128/35‑1 (MQ=255) aagcTGGTTTGCCCCCCAGCACCAACAACAGAAAt < 1:12392941/35‑1 (MQ=255) agcTGGTTTTCCCCCCAGCACCAACAACAGAAATc > 1:929703/1‑35 (MQ=255) agcTGGTTTTCCCCCCAGCACCAACAACAGAAATc < 1:10910099/35‑1 (MQ=255) agcTGGTTTTCCCCCCAGCACCAACAACAGAAATc < 1:10366538/35‑1 (MQ=255) gcTGGTTTTCCCCCCAGCACCAACAACAGAAATca < 1:20561239/35‑1 (MQ=255) gcTGGTTTTCCCCCCAGCACCAACAACAGAAATca > 1:20197307/1‑35 (MQ=255) gcTGGTTTTCCCCCCAGCACCAACAACAGAAATca > 1:13073657/1‑35 (MQ=255) tGGTTTTCCCCCCAGCACCAACAACAGAAATcaca > 1:14149668/1‑35 (MQ=255) tGGTTTTCCCCCCAGCACCAACAACAGAAATcaca < 1:11697900/35‑1 (MQ=255) tGGTTTTCCCCCCAGCACCAACAACAGAAATcaca > 1:8915447/1‑35 (MQ=255) tGGTTTTCCCCCCAGCACCAACAACAGAAATcaca > 1:18363479/1‑35 (MQ=255) ggTTTTCCCCCCAGCctcaggctgtaatcttaatt < 1:7261011‑M1/35‑21 (MQ=255) ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg > 1:2367186/1‑35 (MQ=255) ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg < 1:6728476/35‑1 (MQ=255) ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg < 1:3663884/35‑1 (MQ=255) ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg > 1:4166293/1‑35 (MQ=255) ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg > 1:16701845/1‑35 (MQ=255) ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg < 1:16433228/35‑1 (MQ=255) agatttcccCCCAGCctcaggctgtaatcttaatt < 1:1322952‑M1/32‑21 (MQ=255) gTTTTCCCCCCAGCACCAACAACAGAAATCACAGt > 1:2242059/1‑35 (MQ=255) gTTTTCCCCCCAGCACCAACAACAGAAATCACAGt < 1:13804549/35‑1 (MQ=255) gTTTTCCCCCCAGCACCAACAACAGAAATCACAGt < 1:9180199/35‑1 (MQ=255) gTTTTCCCCCCAGCACCAACAACAGAAATCACAGt < 1:10095603/35‑1 (MQ=255) ttttCCCCCCAGCctcaggctgtaatcttaatttc < 1:6951668‑M1/35‑23 (MQ=255) ttttCCCCCCAGCACCAACAACAGAAATCACAGTg < 1:13456973/35‑1 (MQ=255) ttttCCCCCCAGCACCAACAACAGAAATCACAGTg > 1:3263523/1‑35 (MQ=255) ttttCCCCCCAGCACCAACAACAGAAATCACAGTg < 1:4489863/35‑1 (MQ=255) ttttCCCCCCAGCACCAACAACAGAAATCACAGTg < 1:8296951/35‑1 (MQ=255) atttcCCCCCAGCctcaggctgtaatcttaatttc < 1:2779359‑M1/34‑23 (MQ=255) atttcCCCCCAGCctcaggctgtaatcttaatttc < 1:9793257‑M1/34‑23 (MQ=255) atttcCCCCCAGCctcaggctgtaatcttaatttc < 1:1331012‑M1/34‑23 (MQ=255) tttCCCCCCAGCctcaggctgtaatcttaatttca < 1:17567557‑M1/35‑24 (MQ=255) tttCCCCCCAGCACCAACAACAGAAATCACAGTgg > 1:18680914/1‑35 (MQ=255) tttCCCCCCAGCACCAACAACAGAAATCACAGTgg > 1:2821050/1‑35 (MQ=255) tttACCCCCAGCctcaggctgtaatcttaatttca < 1:3037177‑M1/35‑24 (MQ=255) ttCCCCCCAGCACCAACAACAGAAATCACAGTggg > 1:12894823/1‑35 (MQ=255) ttCCCCCCAGCACCAACAACAGAAATCACAGTggg > 1:11042044/1‑35 (MQ=255) ttCCCCCCAGCACCAACAACAGAAATCACAGTggg < 1:19430143/35‑1 (MQ=255) ttCCCCCCAGCACCAACAACAGAAATCACAGTggg > 1:15950842/1‑35 (MQ=255) ccccccAGCGCCAACAACAGAAATCACCGTGGGAc < 1:18949538/35‑1 (MQ=37) ccccccAGCACCAACAACAGAAATCACAGTGGGAc < 1:9266412/35‑1 (MQ=255) ccccccAGCACCAACAACAGAAATCACAGTGGGAc > 1:3238950/1‑35 (MQ=255) ccccccAGCACCAACAACAGAAATCACAGTGGGAc > 1:9010622/1‑35 (MQ=255) ccccccAGCACCAACAACAGAAATCACAGTGGGAc > 1:7878661/1‑35 (MQ=255) acccccaGCctcaggctgtaatcttaatttcaaag < 1:17509686‑M1/34‑27 (MQ=255) cccccAGCACCAACAACAGAAATCACAGTGGGACg < 1:18968972/35‑1 (MQ=255) cccccAGCACCAACAACAGAAATCACAGTGGGACg > 1:2692893/1‑35 (MQ=255) cccccAGCACCAACAACAGAAATCACAGTGGGACg < 1:14633418/35‑1 (MQ=255) ccccAGCctcaggctgtaatcttaatttcaaagaa < 1:11631308‑M1/35‑29 (MQ=255) cccAGCctcaggctgtaatcttaatttcaaagaaa < 1:385628‑M1/35‑30 (MQ=255) cccAGCACCAACAACAGAAATCACAGTGGGACGtt < 1:7568229/35‑1 (MQ=255) cccAGCACCAACAACAGAAATCACAGTGGGACGtt < 1:16702159/35‑1 (MQ=255) cccAGCACCAACAACAGAAATCACAGTGGGACGtt < 1:19135900/35‑1 (MQ=255) cccAGCACCAACAACAGAAATCACAGTGGGACGtt < 1:2007012/35‑1 (MQ=255) ccAGCctcaggctgtaatcttaatttcaaagaaac < 1:12059952‑M1/35‑31 (MQ=255) ccAGCACCAACAACAGAAATCACAGTGGGACGttt < 1:905057/35‑1 (MQ=255) ccAGCACCAACAACAGAAATCACAGTGGGACGttt < 1:550063/35‑1 (MQ=255) ccAGCACCAACAACAGAAAACACAGTTGGACGttt > 1:1265524/1‑35 (MQ=37) cAGCctcaggctgtaatcttaatttcaaagaaact < 1:13972433‑M1/35‑32 (MQ=255) cAGCctaaggctgtaatcttaatttcaaagaaact < 1:15319638‑M1/35‑32 (MQ=255) cAGCACCAACAACAGAAATCACAGTGGGACGTTTc > 1:12779848/1‑35 (MQ=255) cAGCACCAACAACAGAAATCACAGTGGGACGTTTc < 1:16962375/35‑1 (MQ=255) aGCctcaggctgtaatcttaatttcaaagaaactt > 1:12827926‑M1/1‑3 (MQ=255) aGCACCAACAACAGAAATCACAGTGGGACGTTTCt < 1:19230031/35‑1 (MQ=255) aGCACCAACAACAGAAATCACAGTGGGACGTTTCt > 1:18006259/1‑35 (MQ=255) aGCACCAACAACAGAAATCACAGTGGGACGTTTCt < 1:1202054/35‑1 (MQ=255) gCctcaggctgtaatcttaatttcaaagaaacttc < 1:2086155‑M1/35‑34 (MQ=255) gCACCAACAACAGAAATCACAGTGGGACGTTTCtt > 1:20314385/1‑34 (MQ=255) gCACCAACAACAGAAATCACAGTGGGACGTTTCTg < 1:10134320/35‑1 (MQ=255) gCACCAACAACAGAAATCACAGTGGGACGTTTCTg > 1:7424265/1‑35 (MQ=255) gCACCAACAACAGAAATCACAGTGGGACGTTTCTg < 1:6516077/35‑1 (MQ=255) cctcaggctgtaatcttaatttcaaagaaacttcg < 1:4873618‑M1/35‑35 (MQ=255) cACCAACAACAGAAATCACAGTGGGACGTTTCTgc < 1:824529/35‑1 (MQ=255) cACCAACAACAGAAATCACAGTGGGACGTTTCTgc < 1:7234421/35‑1 (MQ=255) | GCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAGCACCAACAACAGAAATCACAGTGGGACGTTTCTGC > REL606/2900697‑2900765 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |