Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 1,162,790 | IS150 (–) +3 bp | 41.7% | coding (601‑603/1071 nt) | plsX → | fatty acid/phospholipid synthesis protein |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 664688 = | NA (NA) | 45 (0.480) | 28/44 | NT | 38.5% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 1162790 = | 62 (0.760) | coding (601/1071 nt) | plsX | fatty acid/phospholipid synthesis protein | |||||
* | ? | REL606 | = 666130 | NA (NA) | 46 (0.450) | 24/48 | NT | 38.2% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 1162792 | 65 (0.720) | coding (603/1071 nt) | plsX | fatty acid/phospholipid synthesis protein |
GTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666099‑666130 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTGAGGCATCCCGAATACTGTCGAGACCCTTT < REL606/1162792‑1162759 GTTTAACTGTCCAACTTTTTGTGGTCAGTACACGa > 1:13217510/1‑34 TTTAACTGTCCAACTTTTTTGGGTCAGTACACGCT > 1:80979/1‑35 TTAACTGTCCAACTTTTTGGGGTCAGTACACGCTG < 1:15271786/35‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACACGCTG < 1:11326424/35‑1 TAACTGTCCAACTTTTTGGGGTCAGTACACGCTGA < 1:7202552/35‑1 TAACTGTCCAACTTTTTGGGGTCAGTACACGCTGA < 1:10732207/35‑1 TAACTGTCCAACTTTTTGGGGTCAGTACACGCTGA > 1:19195676/1‑35 TAACTGTCCAACTTTTTGGGGTCAGTACACGCTGA > 1:6923918/1‑35 AACTGTCCAACTTTTTGGGGTCAGTACACGCTGAG < 1:15740683/35‑1 ACTGTCCAACTTTTTGGGGTCAGTACACGCTGAGG < 1:284192/35‑1 CTGTCCAACTTTTTGGGGTCAGTACACGCTGATGC > 1:19839340/1‑35 CTGTCCAACTTTTTGGGGTCAGTACACGCTGATGC > 1:11068900/1‑35 CTGTCCAACTTTTTGGGGTCAGTACACGCTGAGGC < 1:18597624/35‑1 CTGTCCAACTTTTTGGGGTCAGTACACGCTGAGGC > 1:17634296/1‑35 GTCCAACTTTTTGGGGTCAGTACACGCTGAGGCAT > 1:3556723/1‑35 GTCCAACTTTTTGGGGTCAGTACACGCTGAGGCAT > 1:16053491/1‑35 TCCAACTTTTTGGGGTCAGTACACGCTGAGGCATC > 1:15752045/1‑35 CCAACTTTTTGGGGTCAGTACACGCTGAGGCATCC > 1:12408084/1‑35 CCAACTTTTTGGGGTCAGTACACGCTGAGGCATCC > 1:11114101/1‑35 CAACTTTTTGGGGTCAGTACACGCTGAGGCATCCC < 1:3174424/35‑1 CAACTTTTTGGGGTCAGTACACGCTGAGGCATCCC < 1:2853877/35‑1 CAACTTTTTGGGGTCAGTACACGCTGAGGCATCCC < 1:15395553/35‑1 AACTTTTTGGGGTCAGTACACGCTGAGGCATCCCG < 1:2083892/35‑1 AACTTTTTGGGGTCAGTACACGCTGAGGCATCCCG < 1:19645514/35‑1 AACTTTTTGGGGTCAGTACACGCTGAGGCATCCCG < 1:10727446/35‑1 AACTTTTTGGGGTCAGTACACGCTGAGGCATCCCG < 1:17847396/35‑1 TTTTTTGGGTCAGTACACGCTGAGGCATCCCGAAT > 1:10331495/1‑35 TTTTTGGGGTCAGTACACGCTGAGGCATCCCGAAT < 1:16063033/35‑1 TTTTTGGGGTCAGTACACGCTGAGGCATCCCGAAT < 1:6302736/35‑1 TTTTTGGGGTCAGTACACGCTGAGGCATCCCGAAT < 1:13695497/35‑1 TTTTTGGGGTCAGTACACGCTGAGGCATCCCGAAT < 1:13746057/35‑1 TTTTTGGGGTCAGTACACGCTGAGGCATCCAGAAT < 1:13105103/35‑1 TTTTGGGGTCAGTACACGCTGAGGCATCCCGAATA < 1:4222608/35‑1 TTTGGGGTCAGTACACGCTGAGGCATCCCGAATAC < 1:5080833/35‑1 TTTGGGGTCAGTACACGCTGAGGCATCCCGAATAC > 1:12910833/1‑35 TTGGGGTCAGTACACGCTGAGGCATCCCGAATACT > 1:15497572/1‑35 GGGTCAGTACATGCTGAGGCATCCCGAATACTGTC > 1:17241625/1‑35 GGGTCAGTACACGCTGAGGCATCCCTAATACTGTC > 1:634360/1‑35 GGGTCAGTACACGCTGAGGCATCCCGAATACTGTC < 1:6464169/35‑1 GGGTCAGTACACGCTGAGGCATCCCGAATACTGTC < 1:14142433/35‑1 GGTCAGTACACGCTGAGGCATCCCGAATACTGTCG < 1:5183611/35‑1 GTCAGTACACGCTGAGGCATCCCGAATACTGTCGA > 1:20293409/1‑35 TCAGTACACGCTGAGGCATCCCGAATACTGTCGAG < 1:12449906/35‑1 CAGTACACGCTGAGGCATCCCGAATACTGTCGAGA > 1:12752988/1‑35 CAGTACACGCTGAGGCATCCCGAATACTGTCGAGA > 1:7319353/1‑35 CAGTACACGCTGAGGCATCCCGAATACTGTCGAGA > 1:17467791/1‑35 CAGTACACGCTGAGGCATCCCGAATACTGTCGAGA > 1:62892/1‑35 AGTACACGCTGAGGCATCCCGAATACTGTCGAGAC > 1:10661108/1‑35 AGTACACGCTGAGGCATCCCGAATACTGTCGAGAC > 1:1920385/1‑35 AGTACACGCTGAGGCATCCCGAATACTGTCGAGAC > 1:4562851/1‑35 GTACACGCTGAGGCATCCCGAATACTGTCGAGACC > 1:3803051/1‑35 GTACACGCTGAGGCATCCCGAATACTGTCGAGACC < 1:13339260/35‑1 GTACACGCTGAGGCATCCCGAATACTGTCGAGACC < 1:13885845/35‑1 TACACGCTGAGGCATCCCGAATACTGTCGAGACCC < 1:6218190/35‑1 ACACGCTGAGGCATCCCGAATACTGTCGAGACCCT > 1:5403620/1‑35 CACGCTGAGGCATCCCGAATACTGTCGAGACCCTT < 1:7881293/35‑1 CACGCTGAGGCATCCCGAATACTGTCGAGACCCTT < 1:16505176/35‑1 ACGCTGAGGCATCCCGAATACTGTCGAGACCCTTT > 1:6183845/1‑35 ACGCTGAGGCATCCCGAATACTGTCGAGACCCTTT > 1:3338767/1‑35 ACGCTGAGGCATCCCGAATACTGTCGAGACCCTTT < 1:19536715/35‑1 ACGCTGAGGCATCCCGAATACTGTCGAGACCCTTT < 1:17858300/35‑1 ACGCTGAGGCATACCGAATACTGTCGAGACCCTTT < 1:955918/35‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666099‑666130 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTGAGGCATCCCGAATACTGTCGAGACCCTTT < REL606/1162792‑1162759 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |