New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 223959 =46 (0.450)15 (0.180) 4/38 NT 24.3% coding (503/654 nt) metI DL‑methionine transporter subunit
?REL606 1306336 = 57 (0.700)intergenic (‑97/+274) cls/kch cardiolipin synthetase/voltage‑gated potassium channel

Only 100 of 107 total aligned reads displayed.

ATACTGATAGCCAATCTGACCTAAACCACCGGCACCGACTGCACCACCCATCGCGGAATAACCGACCAG  >  REL606/223925‑223993
                                  |                                  
aTACTGATAGCCAATCTGACCTAAACCACCGGCAc                                    >  1:13453124/1‑35 (MQ=255)
 tACTGATAGCCAATCTGACCTAAACCACCGGCAcc                                   >  1:8764564/1‑35 (MQ=255)
   cTGATAGCCAATCTGACCTAAACCACCGGCACCGa                                 >  1:13163063/1‑35 (MQ=255)
    tGATAGCCAATCTGACCTAAACCACCGGCACCGAc                                >  1:10326625/1‑35 (MQ=255)
    tGATAGCCAATCTGACCTAAACCACCGGCACCGAc                                >  1:7481837/1‑35 (MQ=255)
    tGATAGCCAATCTGACCTAAACCACCGGCACCGAc                                >  1:18758002/1‑35 (MQ=255)
    tGATAGCCAATCTGACCTAAACCACCGGCACCGAc                                >  1:8722953/1‑35 (MQ=255)
    tGATAGCCAATCTGACCTAAACCACCGGCACCGAc                                >  1:12950291/1‑35 (MQ=255)
    tGATAGCCAATCTGACCTAAACCACCGGCACCGAc                                >  1:11584047/1‑35 (MQ=255)
     gATAGCCAATCTGACCTAAACCACCGGCACCGACt                               >  1:6508943/1‑35 (MQ=255)
     gATAGCCAATCTGACCTAAACCACCGGCACCGACt                               >  1:5481243/1‑35 (MQ=255)
     gATAGCCAATCTGACCTAAACCACCGGCACCGACt                               >  1:20096657/1‑35 (MQ=255)
      aTAGCCAATCTGACCTAAACCACCGGCACCGACTg                              >  1:8233532/1‑35 (MQ=255)
        aGCCAATCTGACCTAAACCACCGGCACCGACTGca                            >  1:18450823/1‑35 (MQ=255)
          ccAATCTGACCTAAACCACCGCCACCGACTGcacc                          >  1:1952855/1‑35 (MQ=255)
           cAATCTTACCTAAACCACCGGCACCGACTGcacca                         >  1:9635664/1‑35 (MQ=255)
           cAATCTGACCTAAACCACCGGCACCGACTGcacca                         >  1:13864815/1‑35 (MQ=255)
           cAATCTGACCTAAACCACCGGCACCGACTGcacca                         >  1:20473917/1‑35 (MQ=255)
           cAATCTGACCTAAACCACCGGCACCGACTGcacca                         >  1:11203872/1‑35 (MQ=255)
            aaTCTGACCTAAACCACCGGCACCGACTGcaccac                        >  1:85507/1‑35 (MQ=255)
            aaTCTGACCTAAACCACCGGCACCGACTGcaccac                        >  1:9713856/1‑35 (MQ=255)
            aaTCTGACCTAAACCACCGGCACCGACTGcaccac                        >  1:8349998/1‑35 (MQ=255)
            aaTCTGACCTAAACCACCGGCACCGACTGcaccac                        >  1:19245580/1‑35 (MQ=255)
            aaTCTGACCTAAACCACCGGCACCGACTGcaccac                        >  1:10477031/1‑35 (MQ=255)
            aaTCTGACCTAAACCACCGGCACCGACTGcaccac                        >  1:12880665/1‑35 (MQ=255)
             aTCTGACCTAAACCACCGGCACCGACTGCaccacc                       >  1:16770827/1‑35 (MQ=255)
              tCTGACCTAAACCACCGGCACCGACTGCACCAccc                      >  1:311766/1‑35 (MQ=255)
               cTGACCTAAACCACCGGCACCGACTGCACCACCCa                     >  1:6797758/1‑35 (MQ=255)
                tGACCTAAACCACCGGCACCGACTGCACCACCCAt                    >  1:16472326/1‑35 (MQ=255)
                 gACCTAAACCACCGGCACCGACTGCACCACCCATc                   >  1:16407151/1‑35 (MQ=255)
                 gACCTAAACCACCGGCACCGACTGCACCACCCATc                   >  1:5754294/1‑35 (MQ=255)
                 gACCTAAACCACCGGCACCGACTGCACCACCCATc                   >  1:18283752/1‑35 (MQ=255)
                 gACCTAAACCACCGGCACCGACTGCACCACCCATc                   >  1:17511246/1‑35 (MQ=255)
                  aCCTAAACCACCGGCACCGACTGCACCACCCATct                  >  1:10336699/1‑34 (MQ=255)
                  aCCTAAACCACCGGCACCGACTGCACCACCCATcg                  >  1:14560099/1‑35 (MQ=255)
                  aCCTAAACCACCGGCACCGACTGCACCACCCATcg                  >  1:4145019/1‑35 (MQ=255)
                  aCCTAAACCACCGGCACCGACTGCACCACCCATcg                  >  1:1327890/1‑35 (MQ=255)
                   ccTAAACCACCGGCACCGACTGCACCACCCATcgc                 >  1:14721033/1‑35 (MQ=255)
                     tAAACCACCGGCACCGACTGCACCACCCATCGCgg               >  1:8308737/1‑35 (MQ=255)
                     tAAACCACCGGCACCGACTGCACCACCCATCGCgg               >  1:2610204/1‑35 (MQ=255)
                      ccccccccgcccCCGACTGCACCACCCATCGCGGa              >  1:18992892‑M1/13‑35 (MQ=255)
                      aaaCCACCTGCACCGACTGCACCACCCATCGCGGa              >  1:15196972/1‑35 (MQ=255)
                      aaaCCACCGGCACCGACTGCACCACCCATCGCGGa              >  1:520681/1‑35 (MQ=255)
                      aaaCCACCGGCACCGACTGCACCACCCATCGCGGa              >  1:7303475/1‑35 (MQ=255)
                       cccccccgcccCCGACTGCACCACCCATCGCGGaa             >  1:15670530‑M1/12‑35 (MQ=255)
                       aaCCACCGGCACCGACTGCACCACCCATCGCGGaa             >  1:7172597/1‑35 (MQ=255)
                        ccccccggccCCGACTGCACCACCCATCGCGGAAt            >  1:18827041‑M1/11‑35 (MQ=255)
                        ccccccgcccCCGACTGCACCACCCATCGCGGAAt            >  1:8983872‑M1/11‑35 (MQ=255)
                        ccccccgcccCCGACTGCACCACCCATCGCGGAAt            >  1:12733665‑M1/11‑35 (MQ=255)
                        accaccGGCACCGACTGCACCACCCATCGCGGAAt            >  1:17643292/1‑35 (MQ=255)
                         ccccggcccCCGACTGCACCACCCATCGCGGAATa           >  1:735588‑M1/10‑35 (MQ=255)
                         cccccgcccCCGACTGCACCACCCATCGCGGAATa           >  1:10431294‑M1/10‑35 (MQ=255)
                         cccccgcccCCGACTGCACCACCCATCGCGGAATa           >  1:11612446‑M1/10‑35 (MQ=255)
                          ccccgcccCCGACTGCACCACCCATCGCGGAATaa          >  1:4448451‑M1/9‑35 (MQ=255)
                          ccccgcccCCGACTGCACCACCCATCGCGGAATaa          >  1:1155530‑M1/9‑35 (MQ=255)
                          caccGGCACCGACTGCACCACCCATCGCGGAATaa          >  1:1408340/1‑35 (MQ=255)
                           cccgcccCCGACTGCACCACCCATCGCGGAATAAc         >  1:10945539‑M1/8‑35 (MQ=255)
                           cccgcccCCGACTGCACCACCCATCGCGGAATAAc         >  1:3217012‑M1/8‑35 (MQ=255)
                           accGGCACCGACTGCACCACCCATCGCGGAATAAc         >  1:16743846/1‑35 (MQ=255)
                           accGGCACCGACTGCACCACCCATCGCGGAATAAc         >  1:18358983/1‑35 (MQ=255)
                           accGGCACCGACTGCACCACCCATCGCGGAATAAc         >  1:18816678/1‑35 (MQ=255)
                            ccgcccCCGACTGCACCACCCATCGCGGAATAAcc        >  1:4920713‑M1/7‑35 (MQ=255)
                            ccGGCACCGACTGCACCACCCATCGCGGNNTnann        >  1:2250518/1‑33 (MQ=25)
                            ccGGCACCGACTGCACCACCCATCGCGGAATAAcc        >  1:11198734/1‑35 (MQ=255)
                             nncccNNGACTGCACCACCCATCGCGGAATAACCg       >  1:11723217‑M1/6‑35 (MQ=255)
                             ggcccCCGACTGCACCACCCATCGCGGAATAACCg       >  1:1350007‑M1/6‑35 (MQ=255)
                             cgcccCCGACTGCACCACCCATCGCGGAATAACCg       >  1:9465737‑M1/6‑35 (MQ=255)
                             cccccCCGACTGCACCACCCATCGCGGAATAACCg       >  1:5854485‑M1/6‑35 (MQ=255)
                             cGGCACCGACTGCACCACCCATCGCGGAATAACCg       >  1:1600215/1‑35 (MQ=255)
                              ggCACCGACTGCACCACCCATCGCGGAATAACCGa      >  1:6497623/1‑35 (MQ=255)
                              ggCACCGACTGCACCACCCATCGCGGAATAACCGa      >  1:13077020/1‑35 (MQ=255)
                               gCACCGACTGCACCACCCATCGCGGAATAACCGAc     >  1:19787189/1‑35 (MQ=255)
                               gCACCGACTGCACCACCCATCGCGGAATAACCGAc     >  1:1648655/1‑35 (MQ=255)
                               gCACCGACTGCACCACCCATCGCGGAATAACCGAc     >  1:15276829/1‑35 (MQ=255)
                                ccCCGACTGCACCACCCATCGCGGAATAACCGAcc    >  1:9702329‑M1/3‑35 (MQ=255)
                                ccCCGACTGCACCACCCATCGCGGAATAACCGAcc    >  1:16871473‑M1/3‑35 (MQ=255)
                                ccCCGACTGCACCACCCATCGCGGAATAACCGAcc    >  1:2218998‑M1/3‑35 (MQ=255)
                                ccCCGACTGCACCACCCATCGCGGAATAACCGAcc    >  1:3396135‑M1/3‑35 (MQ=255)
                                ccCCGACTGCACCACCCATCGCGGAATAACCGAcc    >  1:3290402‑M1/3‑35 (MQ=255)
                                cACCGACTGCACCACCCGTCGCGGAATAACCGAcc    >  1:9618304/1‑35 (MQ=255)
                                cACCGACTGCACCACCCATCGCGGAATAACCGAcg    >  1:9891229/1‑34 (MQ=255)
                                cACCGACTGCACCACCCATCGCGGAATAACCGAcc    >  1:12351134/1‑35 (MQ=255)
                                cACCGACTGCACCACCCATCGCGGAATAACCGAcc    >  1:9269402/1‑35 (MQ=255)
                                cACCGACTGCACCACCCATCGCGGAATAACCGAcc    >  1:14452429/1‑35 (MQ=255)
                                cACCGACTGCACCACCCATCGCGGAATAACCGAcc    >  1:17911637/1‑35 (MQ=255)
                                 cCCGACTGCACCACCCATCGCGGAATAACCGACCa   >  1:16298736‑M1/2‑35 (MQ=255)
                                 aCCGACTGCACCACCCATCGCGGAATAACCGACCa   >  1:10842997/1‑35 (MQ=255)
                                 aCCGACTGCACCACCCATCGCGGAATAACCGACCa   >  1:16546527/1‑35 (MQ=255)
                                 aCCGACTGCACCACCCATCGCGGAATAACCGACCa   >  1:17024798/1‑35 (MQ=255)
                                 aCCGACTGCACCACCCATCGCGGAATAACCGACCa   >  1:3506442/1‑35 (MQ=255)
                                  CCGACTGCACCACCCATCGCGGAATAACCGACcat  <  1:5472358‑M1/35‑2 (MQ=255)
                                  CCGACTGCACCACCCATCGCGGAATAACCGACCAg  >  1:18504909‑M1/1‑35 (MQ=255)
                                  CCGACTGCACCACCCATCGCGGAATAACCGACCAg  <  1:18931252‑M1/35‑1 (MQ=255)
                                  CCGACTGCACCACCCATCGCGGAATAACCGACCAg  <  1:13936920‑M1/35‑1 (MQ=255)
                                  CCGACTGCACCACCCATCGCGGAATAACCGACCAg  <  1:3844474‑M1/35‑1 (MQ=255)
                                  CCGACTGCACCACCCATCGCGGAATAACCGACCAg  <  1:1291744‑M1/35‑1 (MQ=255)
                                  CCGACTGCACCACCCATCGCGGAATAACCGACCAg  <  1:12830186‑M1/35‑1 (MQ=255)
                                  CCGACTGCACCACCCATCGCGGAATAACCGACCAg  >  1:5357839‑M1/1‑35 (MQ=255)
                                  CCGACTGCACCACCCATCGCGGAATAACCGACCAg  <  1:11522473‑M1/35‑1 (MQ=255)
                                  CCGACTGCACCACCCATCGCGGAATAACCGACCAg  >  1:10979026‑M1/1‑35 (MQ=255)
                                  |                                  
ATACTGATAGCCAATCTGACCTAAACCACCGGCACCGACTGCACCACCCATCGCGGAATAACCGACCAG  >  REL606/223925‑223993

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.