New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1760819 = | 58 (0.560) | 7 (0.080) | 5/42 | NT | 9.0% | coding (575/1701 nt) | ydiD | hypothetical protein |
? | REL606 | = 4434365 | 91 (1.010) | coding (58/1503 nt) | ytfR | predicted sugar transporter subunit: ATP‑binding component of ABC superfamily |
Only 100 of 170 total aligned reads displayed.
GATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAG > REL606/4434331‑4434399 | gaTCCTCCGCACCGAAGGATTAAGTAAATTTTTcc < 1:5384450/35‑1 (MQ=255) aTCCTCCGCACCGAAGGATTAAGTAAATTTTTCCc < 1:10054729‑M2/35‑2 (MQ=255) aTCCTCCGCACCGAAGGATTAAGTAAATTTTTCCc < 1:18337673‑M2/35‑2 (MQ=255) aTCCTCCGCACCGAAGGATTAAGTAAATTTTTCCc < 1:18481861‑M2/35‑2 (MQ=255) aTCCTCCGCACCGAAGGATTAAGTAAATTTTTCCc > 1:656950‑M2/1‑34 (MQ=255) tcctccGCACCGAAGGATTAAGTAAATTTTTCCcc > 1:3784254‑M2/1‑33 (MQ=255) tcctccGCACCGAAGGATTAAGTAAATTTTTCCcc < 1:3102003‑M2/35‑3 (MQ=255) tcctccGCACCGAAGGATTAAGTAAATTTTTCCcc > 1:16572893‑M2/1‑33 (MQ=255) tcctccGCACCGAAGGATTAAGTAAATTTTTCCcc < 1:9098792‑M2/35‑3 (MQ=255) cctccGCACCGAAGGATTAAGTAAATTTTTCCccg > 1:2217837‑M2/1‑32 (MQ=255) cctccGAACCGAAGGATTAAGTAAATTTTTCCccg > 1:19087128‑M2/1‑32 (MQ=255) ctccGCACCGAAGGATTAAGTAAATTTTTCCCCgg < 1:11216767/35‑1 (MQ=255) ctccGCACCGAAGGATTAAGTAAATTTTTCCCCgg < 1:2289761/35‑1 (MQ=255) ctccGCACCGAAGGATTAAGTAAATTTTTCCCCgg < 1:2500723/35‑1 (MQ=255) ctccGCACCGAAGGATTAAGTAAATTTTTCCCCgg < 1:10816305/35‑1 (MQ=255) ctccGCACCGAAGGATTAAGTAAATTTTTCCCCgg > 1:2743768/1‑35 (MQ=255) ctccGCACCGAAGGATTAAGTAAATTTTTCCCCgg < 1:14345863/35‑1 (MQ=255) tccGCACCGAAGGATTAAGTAAATTTTTCCCCGGc < 1:4940564/35‑1 (MQ=255) tccGCACCGAAGGATTAAGTAAATTTTTCCCCGGc < 1:10146950/35‑1 (MQ=255) ccGCACCGAAGGATTAAGTAAATTTTTCCCCGGCg < 1:14469654/35‑1 (MQ=255) ccGCACCGAAGGATTAAGTAAATTTTTCCCCGGCg < 1:17356938/35‑1 (MQ=255) ccGCACCGAAGGATTAAGTAAATTTTTCCCCGGCg < 1:6024017/35‑1 (MQ=255) cGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGt > 1:6963662/1‑35 (MQ=255) cGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGt > 1:15261598/1‑35 (MQ=255) cGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGt > 1:16120829/1‑35 (MQ=255) gCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTc < 1:3520344/35‑1 (MQ=255) gCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTc > 1:4042812/1‑35 (MQ=255) gCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTc < 1:5037590/35‑1 (MQ=255) gCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTc > 1:6477280/1‑35 (MQ=255) gCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTc > 1:10382645/1‑35 (MQ=255) gCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTc < 1:16585894/35‑1 (MQ=255) gCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTc > 1:15753853/1‑35 (MQ=255) gCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTc < 1:8135577/35‑1 (MQ=255) cACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCa < 1:871832/35‑1 (MQ=255) cACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCa > 1:16947356/1‑35 (MQ=255) cACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCa > 1:8058041/1‑35 (MQ=255) cACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCa < 1:15494591/35‑1 (MQ=255) cACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCa > 1:11833064/1‑35 (MQ=255) cACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCa > 1:13865137/1‑35 (MQ=255) aCCGAAGGATTAAGTAAATTTTTCCCCGGCGTCaa > 1:829277/1‑35 (MQ=255) ccGAAGGATTAAGTAAATTTTTCCCCGGCGTCaaa > 1:18959913/1‑35 (MQ=255) ccGAAGGATTAAGTAAATTTTTCCCCGGCGTCaaa < 1:8130637/35‑1 (MQ=255) ccGAAGGATTAAGTAAATTTTTCCCCGGCGTCaaa > 1:10654938/1‑35 (MQ=255) ccGAAGGATTAAGTAAATTTTTCCCCGGCGTCaaa < 1:16767531/35‑1 (MQ=255) cGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAg > 1:10348694/1‑35 (MQ=255) cGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAg < 1:12971772/35‑1 (MQ=255) cGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAg > 1:18779262/1‑35 (MQ=255) cGAAGGATTAAGTAAATTTTTCCCAGGCGTCAAAg < 1:20142841/35‑1 (MQ=255) gAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGc > 1:11755112/1‑35 (MQ=255) aaGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCg > 1:361017/1‑35 (MQ=255) aGGATTAAGTAAATTTTTCCCGGGCGTCAAAGCGt > 1:14881215/1‑35 (MQ=255) aGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGt > 1:1711256/1‑35 (MQ=255) ggATTAAGTAAATTTTTCCCCGGCGTCAAAGCGtt > 1:460175/1‑35 (MQ=255) ggATTAAGTAAATTTTTCCCCGGCGTCAAAGCGtt > 1:14912750/1‑35 (MQ=255) ggATTAAGTAAATTTTTCCCCGGCGTCAAAGCGtt < 1:16018892/35‑1 (MQ=255) gATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTa > 1:9898631/1‑35 (MQ=255) gATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTa < 1:9312523/35‑1 (MQ=255) gATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTa < 1:19441148/35‑1 (MQ=255) gATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTa < 1:19361870/35‑1 (MQ=255) aTTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAg < 1:9410779/35‑1 (MQ=255) aTTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAg > 1:12230497/1‑35 (MQ=255) aTTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAg > 1:14156252/1‑35 (MQ=255) aTTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAg < 1:1367034/35‑1 (MQ=255) ttAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGa > 1:5112142/1‑35 (MQ=255) ttAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGa > 1:17084011/1‑35 (MQ=255) tAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGAc > 1:10286953/1‑35 (MQ=255) tAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGAc > 1:13122798/1‑35 (MQ=255) tAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGAc < 1:13341061/35‑1 (MQ=255) aaGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACa < 1:12196114/35‑1 (MQ=255) aGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACaa > 1:5674691/1‑35 (MQ=255) aGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACaa < 1:15426714/35‑1 (MQ=255) aGTAAATTTTTCCACGGCGTCAAAGCGTTAGACaa < 1:17510838/35‑1 (MQ=255) gTAAATTTTTCCccgacaatatcccactgaccacg > 1:9628592‑M2/1‑12 (MQ=255) gTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAAc > 1:19923934/1‑35 (MQ=255) gTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAAc > 1:7008931/1‑35 (MQ=255) gTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAAc > 1:5039492/1‑35 (MQ=255) gTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAAc < 1:14332311/35‑1 (MQ=255) gTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAAc < 1:18900263/35‑1 (MQ=255) aagTTTTTCCccgacaatatcccactgaccacggc > 1:2664451‑M2/1‑10 (MQ=255) aaaTTTTTCCccgacaatatcccactgaccacggc > 1:1950362‑M2/1‑10 (MQ=255) aaTTTTTCCCCGGCGTCAAAGCGTTAGACAACggt > 1:12173775/1‑33 (MQ=255) aaTTTTTCCCCGGCGTCAAAGCGTTAGACAACGtt < 1:20553269/35‑1 (MQ=255) aTTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTg < 1:646381/35‑1 (MQ=255) tttttCCccgacaatatcccactgaccacggcgat > 1:6349113‑M2/1‑7 (MQ=255) tttttCCCCGGCGTCAAAGCGTTAGACAACGTTGa > 1:1552013/1‑35 (MQ=255) ttttCCccgacaatatcccactgaccacggcgata > 1:2151917‑M2/1‑6 (MQ=255) ttttCCCCGGCGTCAAAGCGTTAGACAACGTTGAt < 1:7393678/35‑1 (MQ=255) ttttCCCCGGCGTCAAAGCGTTAGACAACGTTGAt > 1:17970455/1‑35 (MQ=255) ttttCCCCGGCGTCAAAGCGTTAGACAACGTTGAt < 1:2169801/35‑1 (MQ=255) tttCCCCGGCGTCAAAGCGTTAGACAACGTTGAtt > 1:10930433/1‑35 (MQ=255) ttCCCCGGCGTCAAAGCGTTAGACAACGTTGAttt < 1:7415102/35‑1 (MQ=255) ttCCCCGGCGTCAAAGCGTTAGACAACGTTGAttt < 1:17457242/35‑1 (MQ=255) ttCCCCGGCGTCAAAGCGTTAGACAACGTTGAttt > 1:8753689/1‑35 (MQ=255) tCCccgacaatatcccactgaccacggcgataacg > 1:6767428‑M2/1‑3 (MQ=255) tCCCCGGCGTCAAAGCGTTAGACAACGTTGAtttt > 1:15966645/1‑34 (MQ=255) tCCCCGGCGTCAAAGCGTTAGACAACGGTGATTTc > 1:12717868/1‑35 (MQ=255) ccccGGCGTCAAAGCGTTAGACAACGTTGATTTCa < 1:19819686/35‑1 (MQ=255) cccgacaatatccccctgaccacggcgataacgac > 1:761807‑M2/1‑1 (MQ=255) cccGGCGTCAAAGCGTTAGACAACGTTGATTTCAg < 1:12965558/35‑1 (MQ=255) cccGGCGTCAAAGCGTTAGACAACGTTGATTTCAg < 1:11455232/35‑1 (MQ=255) | GATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAG > REL606/4434331‑4434399 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |