New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 687921 | 62 (0.600) | 12 (0.130) | 4/44 | NT | 12.4% | coding (1883/1947 nt) | nagE | fused N‑acetyl glucosamine specific PTS enzyme: IIC, IIB , and IIA components |
? | REL606 | 970674 = | 112 (1.190) | intergenic (‑27/+28) | pflB/focA | pyruvate formate lyase I/formate transporter |
Only 100 of 124 total aligned reads displayed.
GTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATGTTGTGGCGGGT > REL606/687887‑687955 | gtggtTTGCAGCAATATCGACGATTTCAGTGGCTT < 1:1558219‑M1/35‑1 (MQ=255) gtggtTTGCAGCAATATCGACGATTTCAGTGGCTT < 1:5045756‑M1/35‑1 (MQ=255) gtggtTTGCAGCAATATCGACGATTTCAGTGGCTT < 1:6171197‑M1/35‑1 (MQ=255) tggtTTGCAGCAATATCGACGATTTCAGTGGCTTt > 1:16440046‑M1/1‑34 (MQ=255) tggtTTGCAGCAATATCGACGATTTCAGTGGCTTt > 1:7775530‑M1/1‑34 (MQ=255) tggtTTGCAGCAATATCGACGATTTCAGTGGCTTt > 1:16818460‑M1/1‑34 (MQ=255) tggtTTGCAGCAATATCGACGATTTCAGTGGCTTg < 1:9190583/35‑1 (MQ=255) tggtTTGCAGCAATATCGACGATTTCAGTGGCTTg < 1:16402488/35‑1 (MQ=255) ggtTTGCAGCAATATCGACGATTTCAGTGGCTTtt > 1:13833834‑M1/1‑33 (MQ=255) ggtTTGCAGCAATATCGACGATTTCAGTGGCTTtt > 1:1261750‑M1/1‑33 (MQ=255) ggtTTGCAGCAATATCGACGATTTCAGTGGCTTcg > 1:1055615‑M1/1‑33 (MQ=255) ggtTTGCAGCAATATCGACGATTTCAGTGGCTTGa < 1:1388776/35‑1 (MQ=255) gtTTGCAGCAATATCGACGATTTCAGTGGCTTttt > 1:7092271‑M1/1‑32 (MQ=255) gtTTGCAGCAATATCGACGATTTCAGTGGCTTtat > 1:19049115‑M1/1‑32 (MQ=255) gtTTGCAGCAATATCGACGATTTCAGTGGCTTGAt < 1:4027170/35‑1 (MQ=255) tttGCAGCAATATCGACGATTTCAGTGGCTTtttt > 1:20163532‑M1/1‑31 (MQ=255) tttGCAGCAATATCGACGATTTCAGTGGCTTtttt > 1:19177186‑M1/1‑31 (MQ=255) tttGCAGCAATATCGACGATTTCAGTGGCTTGATc < 1:1715767/35‑1 (MQ=255) tttGCAGCAATATCGACGATTTCAGTGGCTTGATc < 1:4460496/35‑1 (MQ=255) ttGCAGCAATATCGACGATTTCAGTGGCTTtttta > 1:10681714‑M1/1‑30 (MQ=255) ttGCAGCAATATCGACGATTTCAGTGGCTTGATCa < 1:7547918/35‑1 (MQ=255) tGCAGCAATATCGACGATTTCAGTGGCTTttttat > 1:7836629‑M1/1‑29 (MQ=255) tGCAGCAATATCGACGATTTCAGTGGCTTGATCAt < 1:15697261/35‑1 (MQ=255) tGCAGCAATATCGACGATCTCAGTGGCTTGATCAt > 1:4539508/1‑35 (MQ=255) gcagcaATATCGACGATTTCAGTGGCTTtattatt > 1:18974411‑M1/1‑28 (MQ=255) cagcaATATCGACGATTTCAGTGGCTTttttattt > 1:4856712‑M1/1‑27 (MQ=255) cagcaATATCGACGATTTCAGTGGCTTtttcatta > 1:14518547‑M1/1‑27 (MQ=255) cagcaATATCGACGATTTCAGTGGCTTGATCATTa < 1:14988894/35‑1 (MQ=255) cagcaATATCGACGATTTCAGTGGCTTGATCATTa < 1:13846154/35‑1 (MQ=255) agcaATATCGACGATTTCAGTGGCTTttttattta > 1:14334328‑M1/1‑26 (MQ=255) agcaATATCGACGATTTCAGTGGCTTttttattta > 1:13463554‑M1/1‑26 (MQ=255) agcaATATCGACGATTTCAGTGGCTTttttattta > 1:8357249‑M1/1‑26 (MQ=255) agcaATATCGACGATTTCAGTGGCTTtttcattta > 1:6399151‑M1/1‑26 (MQ=255) agcaATATCGACGATTTCAGTGGCTTGATCATTaa < 1:10296622/35‑1 (MQ=255) agcaATATCGACGATTTCAGTGGCTTGATCATTaa < 1:600219/35‑1 (MQ=255) caATATCGACGATTTCAGTGGCTTttttatttaaa > 1:8214687‑M1/1‑24 (MQ=255) caATATCGACGATTTCAGTGGCTTTTTTATTaaaa > 1:8650804/1‑34 (MQ=21) caATATCGACGATTTCAGTGGCTTGATCATTAAAg < 1:7820933/35‑1 (MQ=255) caATATCGACGATTTCAGTGGCTTGATCATTAAAg < 1:18377148/35‑1 (MQ=255) agtatCGACGATTTCAGTGGCTTGATCATTAAAGc < 1:19194631/33‑1 (MQ=255) aaTATCGACGATTTCAGTGGCTTttttatttaatc > 1:197555‑M1/1‑23 (MQ=255) aaTATCGACGATTTCAGTGGCTTTTTCACTaaaaa > 1:4337526/1‑33 (MQ=21) aaTATCGACGATTTCAGTGGCTTGATCATTAAAGc < 1:3553993/35‑1 (MQ=255) atatCGACGATTTCAGTGGCTTGATCATTAAAGCt < 1:2420432/35‑1 (MQ=255) atatCGACGATTTCAGTGGCTTGATCATTAAAGCt < 1:20541966/35‑1 (MQ=255) atatCGACGATTTCAGTGGCTTGATCATTAAAGCt < 1:11091210/35‑1 (MQ=255) atatCGACGATTTCAGTGGCTTGATCATTAAAGCn < 1:2809328/35‑1 (MQ=255) tatCGACGATTTCAGTTGCTTGATCATTAAAGCTc > 1:18790342/1‑35 (MQ=255) atCGACGATTTCAGTGGCTTGATCATTAAAGCTCa < 1:20059372/35‑1 (MQ=255) atCGACGATTTCAGTGGCTTGATCATTAAAGCTCa < 1:6813732/35‑1 (MQ=255) atCGACGATTTCAGTGGCTTGATCATTAAAGCTCa < 1:6014367/35‑1 (MQ=255) atCGACGATTTCAGTGGCTTGATCATTAAAGCTCa < 1:2474556/35‑1 (MQ=255) tCGACGATTTCAGTGGCTTGATCATTAAAGCTCAg < 1:13228560/35‑1 (MQ=255) tCGACGATTTCAGTGGCTTGATCATTAAAGCTCAg < 1:2265565/35‑1 (MQ=255) cgacgaTTTCAGTGGCTTGATCATTAAAGCTCAgg < 1:14671823/35‑1 (MQ=255) cgacgaTTTCAGTGGCTTGATCATTAAAGCTCAgg < 1:17570141/35‑1 (MQ=255) cgacgaTTTCAGTGGCTTGATCATTAAAGCTCAgg < 1:6916075/35‑1 (MQ=255) acgaTTTCAGTGGCTTGATCATTAAAGCTCAGGGc < 1:415958/35‑1 (MQ=255) cgaTTTCAGTGGCTTGATCATTAAAGCTCAGGGcc < 1:5326936/35‑1 (MQ=255) cgaTTTCAGTGGCTTGATCATTAAAGCTCAGGGcc < 1:16716359/35‑1 (MQ=255) gaTTTCAGTGGCTTGATCATTAAAGCTCAGGGCCa < 1:13279975/35‑1 (MQ=255) gaTTTCAGTGGCTTGATCATTAAAGCTCAGGGCCa < 1:6439212/35‑1 (MQ=255) gaTTTCAGTGGCTTGATCATTAAAGCTCAGGGCCa < 1:4640731/35‑1 (MQ=255) aTTTCAGTGGCTTGATCATTAAAGCTCAGGGCCAt < 1:5087282/35‑1 (MQ=255) aTTTCAGTGGCTTGATCATTAAAGCTCAGGGCCAt < 1:17708532/35‑1 (MQ=255) tttCAGTGGCTTGATCATTAAAGCTCAGGGCCAtg < 1:3755738/35‑1 (MQ=255) tttCAGTGGCTTGATCATTAAAGCTCAGGGCCAtg < 1:13503685/35‑1 (MQ=255) ttCAGTGGCTTGATCATTAAAGCTCAGGGCCAtgt < 1:13093801/35‑1 (MQ=255) ttCAGTGGCTTGATCATTAAAGCTCAGGGCCAtgt < 1:18058927/35‑1 (MQ=255) ttCAGTGGCTTGATCATTAAAGCTCAGGGCAAtgt < 1:14693610/35‑1 (MQ=255) tCAGTGGCTTGATCATTAAAGCTCAGGGCCAtgtt < 1:11989553/35‑1 (MQ=255) tCAGTGGCTTGATCATTAAAGCTCAGGGCCAtgtt < 1:12941391/35‑1 (MQ=255) cAGTGGCTTGATCATTATAGCTCAGGGCCAtgttg < 1:12948686/35‑1 (MQ=255) cAGTGGCTTGATCATTAAAGCTCAGGGCCAtgttg < 1:17022215/35‑1 (MQ=255) aGTGGCTTGATCATTAAAGCTCGGGGCCAtgttgt < 1:2573290/35‑1 (MQ=255) aGTGGCTTGATCATTAAAGCTCAGGGCCAtgttgt < 1:8194181/35‑1 (MQ=255) aGTGGCTTGATCATTAAAGCTCAGGGCCAtgttgt < 1:11988406/35‑1 (MQ=255) aGTGGCTTGATCATTAAAGCTCAGGGCCAtgttgt < 1:19724876/35‑1 (MQ=255) gTGGCTTGATCATTAAAGCTCAGGGCCATGTtgtg < 1:2305843/35‑1 (MQ=255) gTGGCTTGATCATTAAAGCTCAGGGCCATGTtgtg < 1:15229000/35‑1 (MQ=255) tGGCTTGATCATTAAAGCTCAGGGCCATGTTGTgg < 1:9555951/35‑1 (MQ=255) tGGCTTGATCATTAAAGCTCAGGGCCATGTTGTgg > 1:4251880/1‑35 (MQ=255) ggCTTGATCATTAAAGCTCAGGGCCATGTTGTGGc < 1:7919206/35‑1 (MQ=255) gCTTGATCATTAAAGCTCAGGGCCATGTTGTGGCg < 1:6505693/35‑1 (MQ=255) gCTTGATCATTAAAGCTCAGGGCCATGTTGTGGCg < 1:13222601/35‑1 (MQ=255) gCTTGATCATTAAAGCTCAGGGCCATGTTGTGGCg > 1:5221346/1‑35 (MQ=255) gCTTGATCATTAAAGCTCAGGGCCATGTTGTGGCg < 1:3568052/35‑1 (MQ=255) cTTGATCATTAAAGCTCAGGGCCATGTTGTGGCgg > 1:6879788/1‑35 (MQ=255) cTTGATCATTAAAGCTCAGGGCCATGTTGTGGCgg > 1:10524852/1‑35 (MQ=255) cTTGATCATTAAAGCTCAGGGCCATGTTGTGGCgg > 1:2758218/1‑35 (MQ=255) ttGATCATTAAAGCTCAGGGCCATGTTGTGGCggg < 1:9081889/35‑1 (MQ=255) ttGATCATTAAAGCTCAGGGCCATGTTGTGGCggg > 1:9826112/1‑35 (MQ=255) ttGATCATTAAAGCTCAGGGCCATGTTGTGGCggg > 1:12062157/1‑35 (MQ=255) ttGATCATTAAAGCTCAGGGCCATGTTGTGGCggg > 1:12385201/1‑35 (MQ=255) ttGATCATTAAAGCTCAGGGCCATGTTGTGGCggg > 1:18088208/1‑35 (MQ=255) ttGATCATTAAAGCTCAGGGCCATGTTGTGGCggg > 1:6710699/1‑35 (MQ=255) ttGATCATTAAAGCTCAGGGCCATGTTGTGGCggg > 1:2159155/1‑35 (MQ=255) tttttatttactgcgtacttcgacaaccattaatg > 1:15786843‑M1/1‑1 (MQ=255) tttttatttactgcgtacttcgacaaccattaatg > 1:3280050‑M1/1‑1 (MQ=255) tGATCATTAAAGCTCAGGGCCATGTTGTGGCgggg > 1:733896/1‑34 (MQ=255) | GTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATGTTGTGGCGGGT > REL606/687887‑687955 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |