New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 473904 | 87 (0.850) | 42 (0.540) | 6/36 | NT | 41.1% | coding (1402/1677 nt) | ybaL | predicted transporter with NAD(P)‑binding Rossmann‑fold domain |
? | REL606 | = 1923465 | 55 (0.710) | coding (662/1011 nt) | ruvB | Holliday junction DNA helicase B |
Only 100 of 183 total aligned reads displayed.
ATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAG > REL606/1923431‑1923499 | aTCACGCACTCGACGCAGCAGACGGTTGGCAATgc < 1:18918575/35‑1 (MQ=255) aTCACGCACTCGACGCAGCAGACGGTTGGCAATgc > 1:9348288/1‑35 (MQ=255) tCACGCACTCGACGCAGCAGACGGTTGGCAATGCg > 1:17668040‑M2/1‑34 (MQ=255) cACGCACTCGACGCAGCAGACGGTTGGCAATgccg > 1:350242/1‑33 (MQ=255) cACGCACTCGACGCAGCAGACGGTTGGCAATGCgg < 1:20099734‑M2/35‑3 (MQ=255) cACGCACTCGACGCAGCAGACGGTTGGCAATGCgc > 1:9647125‑M2/1‑33 (MQ=255) cACGCACTCGACGCAGCAGACGGTTGGCAATGCgc > 1:7716244‑M2/1‑33 (MQ=255) cACGCACTCGACGCAGCAGACGGTTGGCAATGCgc < 1:7840987‑M2/35‑3 (MQ=255) aCGCGCTCGACGCAGCAGACGGTTGGCAATGCgcg > 1:12385803‑M2/1‑32 (MQ=255) aCGCACTCGACGCAGCAGACGGTTGGCAATGCgcg < 1:4098565‑M2/35‑4 (MQ=255) cGCACTCGACGCAGCAGACGGTTGGCAATGCgcgg > 1:6861025‑M2/1‑31 (MQ=255) gCACTCGACGCAGCAGACGGTTGGCAATGCgcggc > 1:1353857‑M2/1‑30 (MQ=255) gCACTCGACGCAGCAGACGGTTGGCAATGCgcggc > 1:16535902‑M2/1‑30 (MQ=255) gCACTCGACGCAGCAGACGGTTGGCAATGCgcggc < 1:16615536‑M2/35‑6 (MQ=255) gCACTCGACGCAGCAGACGGGTGGCAATGCgcggc < 1:4551085‑M2/35‑6 (MQ=255) cACTCGACGCAGCAGACGGTTGGCAATGCgcgggg < 1:13554013‑M2/35‑7 (MQ=255) cACTCGACGCAGCAGACGGTTGGCAATGCgcggcg > 1:2036906‑M2/1‑29 (MQ=255) cACTCGACGCAGCAGACGGTTGGCAATGCgcggcg < 1:10240782‑M2/35‑7 (MQ=255) cACTCGACGCAGCAGACGGTTGGCAATGCgcggcg > 1:10176853‑M2/1‑29 (MQ=255) cACTCGACGCAGCAGACGGGTGGCAATGCgcggcg < 1:17749964‑M2/35‑7 (MQ=255) cTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTa > 1:17733015/1‑35 (MQ=255) cTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTa > 1:1955249/1‑35 (MQ=255) tCGACGCAGTAGACGGTTGGCAATGCGCGGCGTAc > 1:15631872/1‑35 (MQ=255) tCGACGCAGCAGACGGTTGGCAATGCGCGGCGTAc > 1:19571365/1‑35 (MQ=255) tCGACGCAGCAGACGGTTGGCAATGCGCGGCGTAc < 1:10792136/35‑1 (MQ=255) tCGACGCAGCAGACGGTTGGCAATGCGCGGCGTAc < 1:3466792/35‑1 (MQ=255) cGACGCAGCAGACGGTTGGCAATGCGCGGCGTAcc > 1:12255573/1‑35 (MQ=255) gccGCAGCAGACGGTTGGCAATGCGCGGCGTACcg < 1:19153208/33‑1 (MQ=255) agcagcaGACGGTTGGCAATGCGCGGCGTACcgcg < 1:1528354/34‑1 (MQ=255) gcagcaGACGGTTGGCAATGCGCGGCGTACCGCGa < 1:18484487/35‑1 (MQ=255) gcagcaGACGGTTGGCAATGCGCGGCGTACCGCGa > 1:19890634/1‑35 (MQ=255) cagcagACGGTTGGCAATGCGCGGCGTACCGCGAg > 1:15737154/1‑35 (MQ=255) agcagACGGTTGGCAATGCGCGGCGTACCGCGAgc > 1:7343769/1‑35 (MQ=255) agcagACGGTTGGCAATGCGAGGCGTACCGCGAgc < 1:6905538/35‑1 (MQ=255) gcagACGGTTGGCAATGCGCGGCGTACCGCGAgcg < 1:4273025/35‑1 (MQ=255) cagACGGTTGGCAATGCGCGGCGTACCGCGAgcgc > 1:16334636/1‑35 (MQ=255) ngACGGTTGGCAATGCGCGGCGTACCGCGAGcgcg > 1:12755793/2‑35 (MQ=255) agACGGTTGGCAATGCGCGGCGTACCGCGAGcgcg < 1:5235198/35‑1 (MQ=255) agACGGTTGGCAATGCGCGGCGTACCGCGAGcgcg > 1:15390293/1‑35 (MQ=255) agACGGTTGGCAATGCGCGGCGTACCGCAAGcgcg > 1:17023504/1‑35 (MQ=255) gACGGTTGGCAATGCGCGGCGTACCGCGAGCGcga > 1:10710533/1‑35 (MQ=255) gACGGTTGGCAATGCGCGGCGTACCGCGAGCGcga < 1:11984210/35‑1 (MQ=255) gACGGTTGGCAATGCGCGGCGTACCGCGAGCGcga < 1:5944028/35‑1 (MQ=255) gACGGTTGGCAATGCGCGGCGTACCGCGAGCGcga > 1:12841487/1‑35 (MQ=255) aCGGTTGGCAATGCGCGGCGTACCGCGAGCGcgac < 1:3742829/35‑1 (MQ=255) aCGGTTGGCAATGCGCGGCGTACCGCGAGCGcgac > 1:5338678/1‑35 (MQ=255) aCGGTTGGCAATGCGCGGCGTACCGCGAGCGcgac < 1:14130249/35‑1 (MQ=255) ggTTGGCAATGCGCGGCGTACCGCGAGCGcgacga > 1:5275384/1‑35 (MQ=255) ttgggcaaTGCgcggcgaacgaagaaattatgcaa > 1:5813837‑M2/4‑11 (MQ=255) gTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAg > 1:4041739/1‑35 (MQ=255) ttGGCAATGCGCGGCGTACCGCGAGCGAGACGAGc > 1:4467481/1‑35 (MQ=255) tgggcaATGCgcggcgaacgaagaaattatgcaac < 1:8160715‑M2/33‑26 (MQ=255) tgggcaATGCgcggcgaacgaagaaattatgcaac > 1:3564444‑M2/3‑10 (MQ=255) tGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCa < 1:7567646/35‑1 (MQ=255) tGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCa < 1:5456933/35‑1 (MQ=255) tGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCa < 1:8357606/35‑1 (MQ=255) gggcAATGCgcggcgaacgaagaaattatgcaact < 1:16044783‑M2/34‑27 (MQ=255) gggcAATGCgcggcgaacgaagaaattatgcaact < 1:17589770‑M2/34‑27 (MQ=255) gggcAATGCgcggcgaacgaagaaattatgcaact > 1:11044705‑M2/2‑9 (MQ=255) gggcAATGCgcggcgaacgaagaaattatgcaact < 1:16771071‑M2/34‑27 (MQ=255) gggcAATGCgcggcgaacgaagaaattatgcaact > 1:1024742‑M2/2‑9 (MQ=255) gggcAATGCgcggcgaacgaagaaattatgcaact < 1:3328955‑M2/34‑27 (MQ=255) ggCAATGCgcggcgaacgaagaaattatgcaactg > 1:6170677‑M2/1‑8 (MQ=255) ggCAATGCgcggcgaacgaagaaattatgcaactg > 1:9828856‑M2/1‑8 (MQ=255) ggCAATGCgcggcgaacgaagaaattatgcaactg > 1:16739866‑M2/1‑8 (MQ=255) ggCAATGCgcggcgaacgaagaaattatgcaactg > 1:20040315‑M2/1‑8 (MQ=255) ggCAATGCgcggcgaacgaagaaattatgcaactg < 1:13012124‑M2/35‑28 (MQ=255) ggCAATGCGCGGCGTACCGCGAGCGCGACGAGCaa < 1:2944933/35‑1 (MQ=255) ggCAATGCGCGGCGTACCGCGAGCGCGACGAGCaa > 1:19273757/1‑35 (MQ=255) gCAATGCgcggcgaacgaagaaattatgcaactgg > 1:11666950‑M2/1‑7 (MQ=255) gCAATGCGCGGCGTCCCGCGAGCGCGACGAGCAAc < 1:6376257/35‑1 (MQ=255) cAATGCgcggcgaacgaagaaattatgcaactggc > 1:16110542‑M2/1‑6 (MQ=255) cAATGCgcggcgaacgaagaaattatgcaactggc > 1:18204737‑M2/1‑6 (MQ=255) cAATGCgcggcgaacgaagaaattatgcaactggc > 1:16045058‑M2/1‑6 (MQ=255) cAATGCgcggcgaacgaagaaattatgcaactggc > 1:12601666‑M2/1‑6 (MQ=255) cAATGCgcggcgaacgaagaaattatgcaactggc < 1:7799118‑M2/35‑30 (MQ=255) cAATGCgcggcgaacgaagaaattatgcaactggc < 1:2367381‑M2/35‑30 (MQ=255) cAATGCgcggcgaacgaagaaattatgcaactggc < 1:3909573‑M2/35‑30 (MQ=255) cAATGCgccgcgaacgaagaaattatgcaactggc < 1:16823223‑M2/35‑30 (MQ=255) aaTGCgcggcgaacgaagaaattatgcaactggcg > 1:11295395‑M2/1‑5 (MQ=255) aaTGCgcggcgaacgaagaaattatgcaactggcg > 1:9514753‑M2/1‑5 (MQ=255) aaTGCgcggcgaacgaagaaattatgcaactggcg < 1:10150244‑M2/35‑31 (MQ=255) aaTGCgcggcgaacgaagaaattatgcaactggcg < 1:5085454‑M2/35‑31 (MQ=255) aaTGCGCGGCGTCCCGCGAGCGCGACGAGCAACtt < 1:6309242/35‑1 (MQ=255) aaTGCGCGGCGTCCCGCGAGCGCGACGAGCAACtt < 1:11185117/35‑1 (MQ=255) aaTGCGCGGCGTCCCGCGAGCGCGACGAGCAACtt < 1:4801121/35‑1 (MQ=255) aTGCgcggcgaacgaagaaattatgcaactggcgc < 1:2536497‑M2/35‑32 (MQ=255) aTGCgcggcgaacgaagaaattatgcaactggcgc < 1:13948649‑M2/35‑32 (MQ=255) aTGCGCGGCGTACCGCGAGCGCGACGAGCAACTTc > 1:3076617/1‑35 (MQ=255) aTGCGCGGCGTACCGCGAGCGCGACGAGCAACTTc > 1:8734990/1‑35 (MQ=255) aTGCGCGGCGTACCGCGAGCGCGACGAGCAACTTc > 1:4209473/1‑35 (MQ=255) aTGCGCGGCGTACCGCGAGCGCGACGAGCAACTTc > 1:19068366/1‑35 (MQ=255) aTGCGCGGAGTCCCGCGAGCGCGACGAGCAACTTc < 1:10578187/35‑1 (MQ=25) tGCgcggcgaacgaagaaattatgcaactggcgca > 1:11717038‑M2/1‑3 (MQ=255) gcgcggcgaacgaagaaattatgcaactggcgcat > 1:11376272‑M2/1‑2 (MQ=255) gcgcggcgaacgaagaaattatgcaactggcgcat > 1:20561706‑M2/1‑2 (MQ=255) gcgcggcgaacgaagaaattatgcaactggcgcat > 1:19197769‑M2/1‑2 (MQ=255) gcgcggcgaacgaagaaattatgcaactggcgcat > 1:622514‑M2/1‑2 (MQ=255) cgcggcgaacgaagaaattatgcaactggcgcctc < 1:19884018‑M2/35‑35 (MQ=255) cgcggcgaacgaagaaattatgcaactggcgcatc < 1:14577769‑M2/35‑35 (MQ=255) | ATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAG > REL606/1923431‑1923499 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |