New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 326204 = | 101 (0.980) | 10 (0.130) | 4/36 | NT | 14.1% | coding (849/1887 nt) | prpE | predicted propionyl‑CoA synthetase with ATPase domain |
? | REL606 | = 4116137 | 46 (0.600) | intergenic (+15/‑78) | katG/yijE | catalase/hydroperoxidase HPI(I)/predicted permease |
Only 100 of 213 total aligned reads displayed.
AAGCGGGCGGTGTGTTCTTTTGTGCTTCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTCTACGC > REL606/326170‑326239 | ccgtttcgacctgctgtaatctgaccccgttcagc > 1:4173189‑M1/35‑35 (MQ=255) ccgtttcgacctgctgtaatctgaccccgttcagc > 1:13861614‑M1/35‑35 (MQ=255) ccgtttcgacctgctgtaatctgaccccgttcagc > 1:17309337‑M1/35‑35 (MQ=255) ccgtttcgacctgctgtaatctgaccccgttcagc > 1:10384505‑M1/35‑35 (MQ=255) aggcgggcggTGTGTTCTTTTGTGCTTCGGATATc < 1:545851/33‑1 (MQ=255) aaGCGGGCGGTGTGTTCTTTTGTGCTTCGGATATc < 1:16956666/35‑1 (MQ=255) aaGCGGGCGGTGTGTTCTTTTGTGCTTCGGATATc > 1:19627923/1‑35 (MQ=255) aaGCGGGCGGTGTGTTCTTTTGTGCTTCGGATATc > 1:1486063/1‑35 (MQ=255) cgtttcgacctgctgtaatctgaccccgttcagCg > 1:6229989‑M1/34‑35 (MQ=255) cgtttcgacctgctgtaatctgaccccgttcagCg > 1:1232172‑M1/34‑35 (MQ=255) cgtttcgacctgctgtaatctgaccccgttcagCg > 1:2298412‑M1/34‑35 (MQ=255) agagggcggTGTGTTCTTTTGTGCTTCGGATATCg < 1:10535200/32‑1 (MQ=255) aGCGGGCGGTGTGTTCTTTTGTGCTTCGGATATCg < 1:9576616/35‑1 (MQ=255) aGCGGGCGGTGTGTTCTTTTGTGCTTCGGATATCg > 1:6904373/1‑35 (MQ=255) aGCGGGCGGTGTGTTCTTTTGTGCTTCGGATATCg > 1:17661466/1‑35 (MQ=255) gtttcgacctgctgtaatctgaccccgttcagCgg > 1:13955956‑M1/33‑35 (MQ=255) gtttcgacctgctgtaatctgaccccgttcagCgg < 1:11041670‑M1/3‑1 (MQ=255) gtttcgacctgctgtaatctgaccccgttcagCgg < 1:13272372‑M1/3‑1 (MQ=255) gtttcgacctgctgtaatctgaccccgctcagCgg < 1:4960235‑M1/3‑1 (MQ=255) gcgggcggTGTGTTCTTTTGTGCTTCGGATTTCgg < 1:752096/35‑1 (MQ=255) gcgggcggTGTGTTCTTTTGTGCTTCGGATATCgg < 1:6718208/35‑1 (MQ=255) gcgggcggTGTGTTCTTTTGTGCTTCGGATATCgg < 1:3654514/35‑1 (MQ=255) gcgggcggTGTGTTCTTTTGTGCTTCGGATATCgg < 1:1108855/35‑1 (MQ=255) tttcgacctgctgtaatctgaccccgttcagCGGc > 1:13663855‑M1/32‑35 (MQ=255) cgggcggTGTGTTCTTTTGTGCTTCGGATATCGGc < 1:13551155/35‑1 (MQ=255) gggcgtTGTGTTCTTTTGTGCTTCGGATATCGGCt > 1:10424999/1‑35 (MQ=255) gggcggTGTGTTCTTTTTTGCTTCGGATATTGGcc > 1:15833029/1‑34 (MQ=37) gggcggTGTGTTCTTTTGTGCTTCGGATATCgggt > 1:18358570/1‑33 (MQ=255) gggcggTGTGTTCTTTTGTGCTTCGGATATCGGCt > 1:18804718/1‑35 (MQ=255) gggcggTGTGTTCTTTTGTGCTTCGGATATCGGCt < 1:10646187/35‑1 (MQ=255) gggcggTGTGTTCTTTTGTGATTCGGATATCGGCt < 1:19245021/35‑1 (MQ=255) tcgacctgctgtaatctgaccccgttcagCGGCTg > 1:8650427‑M1/30‑35 (MQ=255) ggcggTGTGTTCTTTTGTGCTTCGGATATCGGCTg < 1:19251401/35‑1 (MQ=255) ggcggTGTGTTCTTTTGTGCTTCGGATATCGGCTg < 1:2665115/35‑1 (MQ=255) gacctgctgtaatctgaccccgttcagCGGGTggg < 1:8882106‑M1/8‑1 (MQ=255) gacctgctgtaatctgaccccgttcagCGGCTggg < 1:7143198‑M1/8‑1 (MQ=255) cggTGTGTTCTTTTGTGCTTCGGATATCGGCTggg > 1:11587789/1‑35 (MQ=255) cggTGTGTTCTTTTGTGCTTCGGATATCGGCTggg > 1:12792187/1‑35 (MQ=255) ggTGTGTTCTTTTGTGCTTCGGATATCGGCTgggg > 1:8307466/1‑34 (MQ=255) ggTGTGTTCTTTTGTGCTTCGGATATCGGCTgggg > 1:15866701/1‑34 (MQ=255) ggTGTGTTCTTTTGTGCTTCGGATATCGGCTgggg > 1:10215012/1‑34 (MQ=255) ggTGTGTTCTTTTGTGCTTCGGATATCGGCTGggt < 1:15590060/35‑1 (MQ=255) gtgtgtTCTTTTGTGCTTCGGATATCGGCTGggtg < 1:16798312/35‑1 (MQ=255) gtgtgtTCTTTTGTGCTTCGGATATCGGCTGggtg < 1:13057429/35‑1 (MQ=255) cctgctgtaatctgaccccgttcagCGGCTGggtg < 1:12151299‑M1/10‑1 (MQ=255) tgtgtTCTTTTGTGCTTCGGATATCGGCTGggtgg < 1:18557962/35‑1 (MQ=255) tgtgtTCTTTTGTGCTTCGGATATCGGCTGggggg > 1:3949410/1‑35 (MQ=255) tgtgtTCTTTTGTGCTTCGGATATCGGCTGggggg > 1:146021/1‑35 (MQ=255) tgtgtTCTTTTGTGCTTCGGATATCGGCTGggggg > 1:5056107/1‑35 (MQ=255) ctgctgtaatctgaccccgttcagCGGCTGggtgg < 1:16241669‑M1/11‑1 (MQ=255) ctgctgtaatctgaccccgttcagCGGCTGggtgg < 1:10113398‑M1/11‑1 (MQ=255) tgctgtaatctgaccccgttcagCGGCTGggtggt < 1:5690320‑M1/12‑1 (MQ=255) gtgtTCTTTTGTGCTTCGGATATCGGCTGggtggt < 1:6612041/35‑1 (MQ=255) gtgtTCTTTTGTGCTTCGGATATCGGCTGggtggt < 1:10076864/35‑1 (MQ=255) gtgtTCTTTTGTGCTTCGGATATCGGCTGggtggt < 1:14694155/35‑1 (MQ=255) gtgtTCTTTTGTGCTTCGGATATCGGCTGgggggg > 1:1521357/1‑34 (MQ=255) tgtTCTTTTGTGCTTCGGATATCGGCTGggggggg > 1:4606953/1‑33 (MQ=38) tgtTCTTTTGTGCTTCGGATATCGGCTGGgtggtg < 1:3258629/35‑1 (MQ=255) gctgtaatctgaccccgttcagCGGCTGGggggtg < 1:13349467‑M1/13‑1 (MQ=255) gtTCTTTTGTGCTTCGGATATCGGCTGGGtggtgg < 1:7285575/35‑1 (MQ=255) gtTCTTTTGTGCTTCGGATATCGGCTGGGgggggg > 1:3005147/1‑35 (MQ=38) gtTCTTTTGTGCTTCGGATATCGGCTGGGgggggg > 1:12462708/1‑35 (MQ=38) gtTCTTTTGTGCTTCGGATATCGGCTGGGgggggg > 1:16602058/1‑35 (MQ=38) ctgtaatctgaccccgttcagCGGctgggtggcgg < 1:10739194‑M1/14‑4 (MQ=255) ttCTTTTGTGCTTCGGATATCGGCTGGGGGGGggg > 1:10875157/1‑35 (MQ=38) ttCTTTTGTGCTTCGGATATCGGCTGGGGGGGggg > 1:12724014/1‑35 (MQ=38) ttCTTTTGTGCTTCGGATATCGGCTGGGGGGGggg > 1:9318540/1‑35 (MQ=38) tgtaatctgaccccgttcagCGGCTGGgtggtggt < 1:16142710‑M1/15‑2 (MQ=255) taatctgaccccgttcagCGGCTgggtggtggcgg < 1:13330638‑M1/17‑4 (MQ=255) taatctgaccccgttcagCGGCTGGGTGgtgggag < 1:11989631‑M1/17‑3 (MQ=255) cTTTTGTGCTTCGGATATCGGCTGGGGGGGggggg > 1:12636069/1‑34 (MQ=255) cTTTTGTGCTTCGGATATCGGCTGGGGGGGggggg > 1:8263419/1‑34 (MQ=255) ttttGTGCTTCGGATATCGGCTGGGGGGGgggggg > 1:6302782/1‑33 (MQ=255) tttGTGCTTCGGATATCGGCTGGGTGGTGGGGCAt < 1:5817071/35‑1 (MQ=255) tttGTGCTTCGGATATCGGCTGGGGGGGggggggg > 1:12895886/1‑32 (MQ=255) tttGTGCTTCGGATATCGGCTGGGGGGGggggggg > 1:9666895/1‑32 (MQ=255) atctgaccccgttcagCGGCTGGGTggtggggggg < 1:19657853‑M1/19‑4 (MQ=255) gtgCTTCGGATATCGGCTGGGTGGTGGGGCATTCg < 1:17877911/35‑1 (MQ=255) gtgCTTCGGATATCGGCTGGGTGGTGGGGCATTCg < 1:20293835/35‑1 (MQ=255) gtgCTTCGGATATCGGCTGGGTGGTGGGGCATTCg < 1:14398574/35‑1 (MQ=255) tgattCGGATATCGGCTGGGTGGTGGGGCATTCGt < 1:14746787/32‑1 (MQ=255) gCTTCGGATATCGGCTGGGTGGTGGGGCATTCGta < 1:2930238/35‑1 (MQ=255) gCTTCGGATATCGGCTGGGTGGTGGGGCATTCGta < 1:15407410/35‑1 (MQ=255) cTTCGGATATCGGCTGGGTGGTGGGGCATTCGtat < 1:16394061/35‑1 (MQ=255) cGGATATCGGCTGGGTGGTGGGGCATTCGTATATc < 1:2373380/35‑1 (MQ=255) cGGATATCGGCTGGGTGGTGGGGCATTCGTATATc < 1:4273066/35‑1 (MQ=255) cGGATATCGGCTGGGGGGGGGGGGGCTCGTCTATc > 1:15086419/1‑35 (MQ=255) ggATATCGGCTGGGTGGTGGGGCATTCGTATATCg < 1:19313775/35‑1 (MQ=255) ggATATCGGCTGGGTGGTGGGGCATTCGTATATCg < 1:7917929/35‑1 (MQ=255) ggATATCGGCTGGGTGGTGGGGCATTCGTATATCg < 1:11509330/35‑1 (MQ=255) gATATCGGCTGGGTGGTGGGGCATTCGTATATCGt < 1:11477961/35‑1 (MQ=255) gATATCGGCTGGGTGGTGGGGCATTCGTATATCGt < 1:2737391/35‑1 (MQ=255) atatCGGCTGGGTGGGGGGGCATTCGTATATCGTc < 1:19583684/35‑1 (MQ=255) atatAGGCTGGGTGGTGGGGCATTCGTATATCGTc < 1:17821980/35‑1 (MQ=255) tatCGGCTGGGTGGTGGGGCATTCGTATATCGTCt < 1:6736435/35‑1 (MQ=255) tatCGGCTGGGTGGTGGGGCATTCGTATATCGTCt < 1:6055899/35‑1 (MQ=255) tatCGGCTGGGGGGGGGGGGGGTCGTATATTGttt > 1:11229296/1‑33 (MQ=255) atCGGCTGGGTGGTGGGGCATTCGTATATCGTCTa < 1:20123649/35‑1 (MQ=255) cGGCTGGGTGG‑GGGGCATTCGTATATCGTCTAcgc < 1:5594053/35‑1 (MQ=38) CGGCTGGGTGGTGGGGCATTCGTATATCGTCTAcg > 1:16733429‑M1/1‑35 (MQ=255) | AAGCGGGCGGTGTGTTCTTTTGTGCTTCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTCTACGC > REL606/326170‑326239 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |