Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 557,789 | 0 | C→A | 100.0% | ‑0.1 | 1 | C147* (TGC→TGA) | ECB_00515 | conserved hypothetical protein |
Rejected: E-value exceeds prediction threshold. | ||||||||||
Reads supporting (aligned to +/- strand): new base (0/1): ref base (0/0): total (0/1) |
AGGATGCGCCCTGTGTGGTACAGGTCGCAATGCGA > REL606/557757‑557791 | ctgATGCGCCCTGTGTGGTACAGGTCGCAATGAGa < 1:5996708/33‑1 (MQ=1) | AGGATGCGCCCTGTGTGGTACAGGTCGCAATGCGA > REL606/557757‑557791 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |