New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 370831 = | 66 (0.640) | 3 (0.050) | 3/28 | NT | 8.4% | intergenic (+23/‑96) | phoA/psiF | bacterial alkaline phosphatase/hypothetical protein |
? | REL606 | 4533970 = | 27 (0.450) | coding (156/1461 nt) | uxuB | D‑mannonate oxidoreductase, NAD‑binding |
Only 100 of 170 total aligned reads displayed.
GGGCTGAAATAAAACCGCGCCCGGC‑GGTGAATTTTCGCTGTCGGGTGGTTTTTTTGCTGTTAGCAACCA > REL606/370797‑370865 | gggCTGAAATAAAACCGCGCCCGGC‑GGTGAAtttt < 1:13311781/35‑1 (MQ=255) gggCTGAAATAAAACCGCGCCCGGC‑GGTGAAtttt < 1:7124521/35‑1 (MQ=255) ggCTGAAATAAAACCGCGCCCGGCGGGGGAAtttt > 1:1696982/1‑35 (MQ=25) ggCTGAAATAAAACCGCGCCCGGC‑GGTGAATTTTc < 1:8917461/35‑1 (MQ=255) ggCTGAAACAAAACCGCGCCCGGC‑GGGGGAttttt > 1:5806747/1‑34 (MQ=21) gcctggcatcaggttaacttcgcagatgccccagt > 1:5373693‑M1/35‑35 (MQ=255) gcctggcatcaggttaacttcgcagatgccccagt > 1:11900254‑M1/35‑35 (MQ=255) gcctggcatcaggttaacttcgcagatgccccagt > 1:9586683‑M1/35‑35 (MQ=255) gcctggcatcaggttaacttcgcagatgccccagt < 1:11161269‑M1/1‑1 (MQ=255) gcctggcatcaggttaacttcgcagatgccccagt > 1:6832221‑M1/35‑35 (MQ=255) gCTGAAATAAAACCGCGCCCGGC‑GGTGAATTTTCg < 1:195047/35‑1 (MQ=255) gCTGAAATAAAACCGCGCCCGGC‑GGGGGAtttttg > 1:1346467/1‑33 (MQ=25) cctggcatcaggttaacttcgcagatgccccagTc > 1:116778‑M1/34‑35 (MQ=255) cctggcatcaggttaacttcgcagatgccccagTc < 1:17902915‑M1/2‑1 (MQ=255) ctggcatcaggttaacttcgcagatgccccagTCg < 1:16794470‑M1/3‑1 (MQ=255) ctggcatcaggttaacttcgcagatgccccagTCg < 1:5519072‑M1/3‑1 (MQ=255) ctggcatcacgttaacttcgcagatgccccagTCg < 1:5096554‑M1/3‑1 (MQ=255) cTGAAATAAAACCGCGCCCGGC‑GGTGAATTTTCGc < 1:14685252/35‑1 (MQ=255) cTGAAATAAAACCGCGCCCGGC‑GGGGGATTTTTGc > 1:2403670/1‑35 (MQ=25) tggcatcaggttaacttcgcagatgccccagTCGc > 1:20208747‑M1/32‑35 (MQ=255) tggcatcaggttaacttcgcagatgccccagTCGc < 1:19236408‑M1/4‑1 (MQ=255) tGAAATAAAACCGCGCCCGGC‑GGGGAATTTTCgta > 1:4743333/1‑33 (MQ=37) tGAAATAAAAACGCGCCCGGC‑GGTGAATTTTCGCt < 1:3374995/35‑1 (MQ=255) ggcatcaggttaacttcgcagatgccccagTCGCt > 1:2843641‑M1/31‑35 (MQ=255) ggcatcaggttaacttcgcagatgccccagTCGCt > 1:16682704‑M1/31‑35 (MQ=255) ggcatcaggttaacttcgcagatgccccagTCGCt > 1:14308570‑M1/31‑35 (MQ=255) ggcatcaggttaacttcgcagatgccccagTCGCt > 1:11755400‑M1/31‑35 (MQ=255) gAAATAAAACCGCGCCCGGC‑GGTGAATTTTCGCTg < 1:12657195/35‑1 (MQ=255) gcatcaggttaacttcgcagatgccccagTCGCTg < 1:6167700‑M1/6‑1 (MQ=255) gcatcaggttaacttcgcagatgccccagTCGCTg < 1:10113770‑M1/6‑1 (MQ=255) gcatcaggttaacttcgcagatgccccagTCGCTg > 1:10964908‑M1/30‑35 (MQ=255) gcatcaggtcaacttcgcagatgccccagTCGCTg > 1:17194130‑M1/30‑35 (MQ=255) aaaTAAAACCGCGCCCGGC‑GGTGAATTTTCGCTGt < 1:4105121/35‑1 (MQ=255) aaaTAAAACCGCGCCCGGC‑GGTGAATTTTCGCTGt < 1:20391907/35‑1 (MQ=255) aaaTAAAACCGCGCCCGGC‑GGTGAATTTTCGCTGt < 1:911676/35‑1 (MQ=255) aaaTAAAACCGCGCCCGGC‑GGGGGATTTTTGCTGt > 1:10821754/1‑35 (MQ=25) catcaggttaacttcgcagatgccccagTCGCTGt > 1:18577186‑M1/29‑35 (MQ=255) atcaggttaacttcgcagatgccccagTCGCTGTc < 1:19483399‑M1/8‑1 (MQ=255) atcaggttaacttcgcagatgccccagTCGCTGTc < 1:6979392‑M1/8‑1 (MQ=255) aTAAAACCGCGCCCGGC‑GGTGAATTTTCGCTGTCg < 1:14855342/35‑1 (MQ=255) aTAAAACCGCGCCCGGC‑GGTGAATTTTCGCTGTCg < 1:14232128/35‑1 (MQ=255) aTAAAACCGCGCCCGGC‑GGTGAATTTTCGCTGTCg < 1:12935366/35‑1 (MQ=255) aTAAAACCGCGCCCGGC‑GGTGAATTTTCGCTATCg < 1:5445981/35‑1 (MQ=255) tcaggttaacttcgcagatgccccagTCGCTGTCg > 1:9629643‑M1/27‑35 (MQ=255) tcaggttaacttcgcagatgccccagTCGCTGTCg > 1:10462819‑M1/27‑35 (MQ=255) tcaggttaacttcgcagatgccccagTCGCTGTCg > 1:8737902‑M1/27‑35 (MQ=255) tcaggttaacttcgcagatgccccagTCGCTGTCg < 1:9071574‑M1/9‑1 (MQ=255) tAAAACCGCGCCCGGC‑GGGGAATTTTTGCTGTCgg > 1:222630/1‑35 (MQ=37) caggttaacttcgcagatgccccagTCGCTgtctg < 1:7887687‑M1/10‑3 (MQ=255) caggttaacttcgcagatgccccagTCGCTGTCgg < 1:13641741‑M1/10‑1 (MQ=255) caggttaacttcgcagatgccccagTCGCTGGCgg < 1:2040954‑M1/10‑1 (MQ=255) agattaacttcgcagatgccccagTCGCTGTCggg < 1:4076519‑M1/11‑1 (MQ=255) aacccGCGCCCGGC‑GGTGAATTTTCGCTGTCGggt < 1:12257399/32‑1 (MQ=255) aaaCCGCGCCCGGC‑GGTGAATTTTCGCTGTCGggt < 1:4752221/35‑1 (MQ=255) aaaCCGCGCCCGGC‑GGTGAATTTTCGCTGTCGggt < 1:4700739/35‑1 (MQ=255) ggttaacttcgcagatgccccagTCGCTGTcgggg < 1:7355381‑M1/12‑2 (MQ=255) ggttaacttcgcagatgccccagTCGCTGTcgggg < 1:5892746‑M1/12‑2 (MQ=255) ggttaacttcgcagatgccccagTCGCTGTcgggg < 1:3015760‑M1/12‑2 (MQ=255) gttaacttcgcagatgccccagTCGCTGtcggggg < 1:11621065‑M1/13‑3 (MQ=255) cgcgCCCGGC‑GGTGAATTTTCGCTGTCGGGTGGtt < 1:17038982/35‑1 (MQ=255) cgcgCCCGGC‑GGTGAATTTTCGCTGTCGGGTGGtt < 1:17292576/35‑1 (MQ=255) cgcCCGGC‑GGTGAATTTTCGCTGTCGGGTGGtttt < 1:3106275/35‑1 (MQ=255) cgcCCGGC‑GGTGAATTTTCGCTGTCGGGTGGtttt < 1:1055426/35‑1 (MQ=255) acttcgcagatgccccagTCGCTGTCGGGGGGttt < 1:8101715‑M1/17‑1 (MQ=255) cttcgcagatgccccagTCGCTGTCGGGGGGtttt < 1:11477547‑M1/18‑1 (MQ=255) cccGGC‑GGTGAATTTTCGCTGTCGGGTGGtttttt < 1:9550706/35‑1 (MQ=255) cccGGC‑GGTGAATTTTCGCTGTCGGGTGGtttttt < 1:1665723/35‑1 (MQ=255) cccGGC‑GGTGAATTTTCGCTGTCGGGTGGtttttt < 1:10275138/35‑1 (MQ=255) ccGGC‑GGTGAATTTTCGCTGTCGGGTGGttttttt < 1:6649645/35‑1 (MQ=255) ccGGC‑GGTGAATTTTCGCTGTCGGGTGGttttttt < 1:8857136/35‑1 (MQ=255) cggc‑ggTGAATTTTCGCTGTCGGGTGGTTTTTTTg < 1:10094252/35‑1 (MQ=255) ggc‑ggTGAATTTTCGCTGTCGGGTGGTTTTTTTGc < 1:12359256/35‑1 (MQ=255) gc‑ggTGAATTTTCGCTGTCGGGGGGgttttttttt > 1:14251902/1‑32 (MQ=21) gc‑ggTGAATTTTCGCTGTCGGGGGGGTTTTTTTCt > 1:7712865/1‑35 (MQ=21) gc‑ggAGAATTTTCGCTGTCGGGGGGGGTTTTTGCt > 1:10041454/1‑35 (MQ=19) c‑ggTGAATTTTCGCTGTCGGGTGGTTTTTTTGCTg > 1:182509/1‑35 (MQ=255) c‑ggTGAATTTTCGCTGTCGGGTGGTTTTTTTGCTg < 1:16176669/35‑1 (MQ=255) ggTGAATTTTCGCTGTCGGGTGGTTTTTTTGCTGt < 1:538762/35‑1 (MQ=255) ggTGAATTTTCGCTGTCGGGTGGTTTTTTTGCTGt > 1:5318118/1‑35 (MQ=255) ggTGAATTTTCGCTGTCGGGTGGTTTTTTTGCTGt > 1:2758552/1‑35 (MQ=255) ggTGAATTTTCGCTGTCGGGTGGTTTTTTTGCTGt > 1:11843923/1‑35 (MQ=255) ggTGAATTTTCGCTGTCGGGTGGTTTTTTTGCTGt > 1:15576538/1‑35 (MQ=255) ggTGAATTTTCGCTGTCGGGTGGTTTTTTTGCTGt > 1:18157913/1‑35 (MQ=255) ggTGAATTTTCGCTGTCGGGTGGTTTTTTTGCTGt > 1:15729539/1‑35 (MQ=255) tGAATTTTCGCTGTCTGGTGGTTTTTTTGCTGTTa > 1:10614338/1‑35 (MQ=255) gAATTTTCGCTGTCGGGTGGTTTTTTTGCTGTTAg < 1:9785102/35‑1 (MQ=255) gAATTTTCGCTGTCGGGTGGTTTTTTTGCTGTTAg < 1:9020783/35‑1 (MQ=255) gAATTTTCGCTGTCGGGTGGTTTTTTTGCTGTTAg < 1:5829629/35‑1 (MQ=255) aaTTTTCGCTGTCGGGTGGTTTTTTTGCTGTTAGc < 1:6858298/35‑1 (MQ=255) aTTTTCGCTGTCGGGTGGTTTTTTTGCTGTTAGCa < 1:16108220/35‑1 (MQ=255) aTTTTCGCTGTCGGGTGGTTTTTTTGCTGTTAGCa < 1:9235215/35‑1 (MQ=255) aTTTTCGCTGTCGGGTGGTTTTTTTGCTGTTAGCa < 1:5301251/35‑1 (MQ=255) ttttCGCTGTCGGGTGGTTTTTTTGCTGTTAGCaa < 1:16108692/35‑1 (MQ=255) ttttCGCTGTCGGGTGGTTTTTTTGCTGTTAGCaa < 1:3112496/35‑1 (MQ=255) tttCGCTGTCGGGTGGTTTTTTTGCTGTTAGCAAc < 1:7924844/35‑1 (MQ=255) tttCGCTGTCGGGTGGTTTTTTTGCTGTTAGCAAc < 1:18620680/35‑1 (MQ=255) ttCGCTGTCGGGTGGTTTTTTTGCTGTTAGCAAcc > 1:18562244/1‑35 (MQ=255) ttCGCTGTCGGGTGGTTTTTTTGCTGTTAGCAAcc < 1:12983903/35‑1 (MQ=255) TCGCTGTCGGGTGGTTTTTTTGCTGTTAGCAACCa > 1:15897867‑M1/1‑35 (MQ=255) TCGCTGTCGGGTGGTTTTTTTGCTGTTAGCAACCa > 1:12095561‑M1/1‑35 (MQ=255) | GGGCTGAAATAAAACCGCGCCCGGC‑GGTGAATTTTCGCTGTCGGGTGGTTTTTTTGCTGTTAGCAACCA > REL606/370797‑370865 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |