New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 312869 = | 100 (0.970) | 13 (0.150) | 6/40 | NT | 13.5% | coding (56/951 nt) | yahI | predicted carbamate kinase‑like protein |
? | REL606 | 4351443 = | 83 (0.970) | intergenic (+51/‑87) | groEL/yjeI | chaperonin GroEL/hypothetical protein |
Only 100 of 221 total aligned reads displayed.
AGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGAT > REL606/4351409‑4351477 | tctttgccgtcatccagcagctttttacggctggg > 1:7355330‑M2/34‑35 (MQ=255) tctttgccgtcatccagcagctttttacggctggg > 1:14310074‑M2/34‑35 (MQ=255) accgcctccgcctgatgctcaatcgactggctggg > 1:18224127‑M2/35‑35 (MQ=255) aaaaagtgtgctaatctgctctccgttcggctggg > 1:19953655‑M2/34‑35 (MQ=255) aaaaagtgtgctaatctgccctccgttcggctggg > 1:2394914‑M2/34‑35 (MQ=255) gAAATAAACAAACCCCCGGGCAGAAATGTCTgggg > 1:9538502/1‑35 (MQ=255) gAAATAAACAAACCCCCGGGCAGAAATGTCTgggg < 1:3012224/35‑1 (MQ=255) aaaagtgtgctaatctgccctccgttcggctgggt > 1:12114168‑M2/33‑34 (MQ=255) aaaagtgtgctaatctgccctccgttcggctgggg > 1:314237‑M2/33‑35 (MQ=255) aaaagtgtgctaatctgccctccgttcggctgggg > 1:1183860‑M2/33‑35 (MQ=255) cgcctccgcctgatgctcaatcgactggctggggg > 1:5882290‑M2/33‑35 (MQ=255) aaagtgtgctaatctgccctccgttcggctggggt > 1:6831891‑M2/32‑34 (MQ=255) aaagtgtgctaatctgccctccgttcggctggggg > 1:6602774‑M2/32‑35 (MQ=255) aaaTAAACAAACCCCCGGGCAGAAATGTCTggggg < 1:18716801/35‑1 (MQ=255) aaaTAAACAAACCCCCGGGCAGAAATGTCTggggg < 1:8934843/35‑1 (MQ=255) ttgccgtcatccagcagctttttacggctgGGGGt > 1:1204213‑M2/31‑35 (MQ=255) ggcggcggaagggcatatttttggtggctgggggg > 1:12195956‑M2/31‑34 (MQ=255) aagtgtgctaatctgccctccgttcggctggggtt > 1:5410414‑M2/31‑33 (MQ=255) aagtgtgctaatctgccctccgttcggctgGGTGt > 1:15280077‑M2/31‑35 (MQ=255) aagtgtgctaatctgccctccgttcggctgGGGGt > 1:15706328‑M2/31‑35 (MQ=255) aaTAAACAAACCCCCGGGCAGAAATGTCTgtgggg > 1:19153997/1‑34 (MQ=255) aaTAAACAAACCCCCGGGCAGAAATGTCTGGGGGt < 1:4069570/35‑1 (MQ=255) tgccgtcatccagcagctttttacggctggggagt > 1:11345337‑M2/30‑32 (MQ=255) agtgtgctaatctgccctccgttcggctgGGGTtt > 1:10071096‑M2/30‑35 (MQ=255) tAAACAAACCCCCGGGCAGAAATGTCTGGGGGttt > 1:18586768/1‑35 (MQ=255) gtgtgctaatctgccctccgttcggctgGGTGttt > 1:4646702‑M2/29‑35 (MQ=255) gccgtcatccagcagctttttacggctgGGGGttt > 1:3890468‑M2/29‑35 (MQ=255) ctccgcctgatgctcaatcgactggctggGGTttt > 1:10763399‑M2/30‑35 (MQ=255) ctccgcctgatgctcaatcgactggctggGGGttt > 1:7393671‑M2/30‑35 (MQ=255) ctccgcctgatgctcaatcgactggctggGGGttt > 1:6734916‑M2/30‑35 (MQ=255) cggcggaagggcatatttttggtggctgGGGGgtt > 1:19740305‑M2/29‑35 (MQ=255) cggcggaagggcatatttttggtggctgGGGGgtt > 1:19443172‑M2/29‑35 (MQ=255) tgtgctaatctgccctccgttcggctgGGTGtttt > 1:10508596‑M2/28‑35 (MQ=255) tccgcctgatgctcaaccgactggctggGGGtttt > 1:3792629‑M2/29‑35 (MQ=255) ggcggaagggcatatttttggtggctgGGGGgttt > 1:6150378‑M2/28‑35 (MQ=255) ggcggaagggcatatttttggtggctgGGGGgttt > 1:9153661‑M2/28‑35 (MQ=255) ggcggaagggcatatttttggtggctgGGGGgttt > 1:7550784‑M2/28‑35 (MQ=255) ggcggaagggcatatttttggtggctgGGGGattt > 1:7299187‑M2/28‑35 (MQ=255) ggcggaagggcatatttttggtggctgGGGAtttt > 1:1315891‑M2/28‑35 (MQ=255) aaacaaacCCCCGGGCAGAAATGTCTGGGGGtttt < 1:18954604/35‑1 (MQ=255) gcggaagggcatatttttggtggctgGGGGttttt > 1:18550005‑M2/27‑35 (MQ=255) ccgcctgatgctcaatcgactggctggGGGtattt > 1:3685957‑M2/28‑35 (MQ=255) aacaaacCCCCGGGCAGAAATGTCTGGGGGttttt > 1:10320146/1‑35 (MQ=255) gtcatccagcagctttttacggctgGGGgtttttt > 1:17892549‑M2/26‑34 (MQ=255) cggaagggcatatttttggtggctgGGGgtttttt > 1:4112033‑M2/26‑34 (MQ=255) cggaagggcatatttttggtggctgGGGggttttt > 1:1766910‑M2/26‑34 (MQ=255) tcatccagcagctttttacggctgGgggttttatt > 1:2752370‑M2/25‑32 (MQ=255) ggaagggcatatttttggtggctgGGggttttttt > 1:1805405‑M2/25‑33 (MQ=255) caaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCt < 1:12453575/35‑1 (MQ=255) caaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCt < 1:13066436/35‑1 (MQ=255) gaagggcatatttttggtggctgGGGGTTTTTTtt > 1:17528116‑M2/24‑35 (MQ=255) cctgatgctcaatcgactggctggGGGTTTTTTtt > 1:14517769‑M2/25‑35 (MQ=255) aaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCtt < 1:1420451/35‑1 (MQ=255) aaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCtt < 1:16726644/35‑1 (MQ=255) aagggcatatttttggtggctgGGGGTTTTTTttt > 1:2435610‑M2/23‑35 (MQ=255) acCCCCGGGCAGAAATGTCTGGGGGTTTTTCtttt < 1:3759054/35‑1 (MQ=255) acCCCCGGGCAGAAATGTCTGGGGGTTTTTCtttt > 1:19581405/1‑35 (MQ=255) aatctgccctccgttcggctgGGTGTTTTTCtttt > 1:2005270‑M2/22‑35 (MQ=255) cccccGGGCAGAAATGTCTGGGGGTTTTTCTTTTg > 1:8430976/1‑35 (MQ=255) ccagcagctttttacggctgGGGGTTTTTTTTTTg > 1:3740673‑M2/21‑35 (MQ=255) ccccGGTCAGAAATGTCTGGGGGTTTTTCTTTTgg > 1:8065101/1‑35 (MQ=255) ccccGGGCAGAAATGTCTGGGGGTTTTTCTTTTgg > 1:11829115/1‑35 (MQ=255) cccGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGt < 1:1231017/35‑1 (MQ=255) cccGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGt > 1:17238664/1‑35 (MQ=255) ccGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTc < 1:12700336/35‑1 (MQ=255) cGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCa < 1:12795714/35‑1 (MQ=255) cGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCa > 1:8780407/1‑35 (MQ=255) cGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCa < 1:5546740/35‑1 (MQ=255) cGGGCAGAAATATCTGGGGGTTTTTCTTTTGGTCa > 1:6764/1‑35 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt > 1:14740/1‑35 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt > 1:10356424/1‑35 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt > 1:14236542/1‑35 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt < 1:19400077/35‑1 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt < 1:16187634/35‑1 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt < 1:563567/35‑1 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt < 1:11969855/35‑1 (MQ=255) gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt > 1:13794182/1‑35 (MQ=255) ggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATc < 1:14835781/35‑1 (MQ=255) gAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTc < 1:518911/35‑1 (MQ=255) gAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTc < 1:14001347/35‑1 (MQ=255) gAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTc > 1:8556186/1‑35 (MQ=255) gAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTc > 1:3250585/1‑35 (MQ=255) aaaTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCt < 1:17354580/35‑1 (MQ=255) aaTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTa > 1:585680/1‑35 (MQ=255) aaTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTa < 1:6022165/35‑1 (MQ=255) aaTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTa > 1:4310943/1‑35 (MQ=255) aaTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTa < 1:705313/35‑1 (MQ=255) aaTGTCTGGGGGGTTTTCTTTTGGTCATCTTTCTa > 1:7604355/1‑35 (MQ=255) aTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAg > 1:997888/1‑35 (MQ=255) tGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGt < 1:19516872/35‑1 (MQ=255) gTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGta < 1:1704285/35‑1 (MQ=255) gTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGta > 1:9626487/1‑35 (MQ=255) gGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAg < 1:16320942‑M2/34‑1 (MQ=255) gGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAg > 1:15891834‑M2/2‑35 (MQ=255) gGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGa > 1:4410676‑M2/2‑35 (MQ=255) gGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGa < 1:3626134‑M2/34‑1 (MQ=255) gGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGa < 1:20532346‑M2/34‑1 (MQ=255) gGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGa > 1:14595200‑M2/2‑35 (MQ=255) gGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGa > 1:1344165‑M2/2‑35 (MQ=255) gggTTTTTCTTTTGGTCATCTTTCTAGTATAAGAt < 1:16533061/35‑1 (MQ=255) | AGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGAT > REL606/4351409‑4351477 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |