New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3686160 | 56 (0.540) | 10 (0.160) | 3/30 | NT | 30.3% | coding (402/741 nt) | yiaT | hypothetical protein |
? | REL606 | 4048325 = | 11 (0.170) | coding (224/927 nt) | yihR | predicted aldose‑1‑epimerase |
CCCCCACCCAGCCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3686144‑3686160 ‑‑‑‑‑‑‑‑cagccgttgGCGATCCGGTTCGGCCACGGAATAAGCACTTTAC > REL606/4048325‑4048358 CCCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCAC < 1:9897997/35‑1 CCCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCAC < 1:9323223/35‑1 CCCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCAC < 1:17360047/35‑1 CCCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCAC < 1:16665987/35‑1 CCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCACG < 1:12422903/35‑1 CCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCACG < 1:4292959/35‑1 CCCCCCCCAGCCGTTGGCGATCCGGTTCGGCCACG < 1:8331632/35‑1 CCCCCCCAGCCGTTGGCGATCCGGTTCGGCCACGG < 1:9262051/35‑1 CCCCCCCAGCCGTTGGCGATCCGGTTCGGCCACGG < 1:6308722/35‑1 CCCCCCCAGCCGTTGGCGATCCGGTTCGGCCACGG < 1:15581129/35‑1 cccCCCAGCCGTTGGCGATCCGGTTCGGCCACGGA < 1:7348155/32‑1 cccCCCAGCCGTTGGCGATCCGGTTCGGCCACGGA < 1:17459574/32‑1 cccCCCAGCCGTTGGCGATCCGGTTCGGCCACGGA < 1:14642477/32‑1 ccCCCAGCCGTTGGCGATCCGGTTCGGCCACGGAA < 1:11981154/33‑1 cCCCAGCCGTTGGCGATCCGGTTCGGCCACGGAAT < 1:17449316/34‑1 cCCCAGCCGTTGGCGATCCGGTTCGGCCACGGAAT < 1:15350068/34‑1 cCCCAGCCGTTGGCGATCCGGTTCGGCCACGGAAT < 1:1490911/34‑1 cCCCAGCCGTTGGCGATCCGGTTCGGCCACGGAAT < 1:14186213/34‑1 cCCCAGCCGTTGGCGATCCGGTTCGGCCACGGAAT < 1:740126/34‑1 cCCCAGCCGTTGGAGATCCGGTTCGGCCACGGAAT < 1:20506821/34‑1 CCCAGCCGTTGGCGATCCGGTTCGGCCACGGAATA < 1:1570640/35‑1 CCCAGCCGTTGGCGATCCGGTTCGGCCACGGAATA < 1:4568272/35‑1 CCCAGCCGTTGGCGATCCGGTTCGGCCACGGAATA < 1:17592434/35‑1 CCAGCCGTTGGCGATCCGGTTCGGCCACGGAATAc < 1:6557607/35‑2 CCAGCCGTTGGCGATCCGGTTCGGCCACGGAATAA < 1:2210182/35‑1 CCAGCCGTTGGCGATCCGGTTCGGCCACGGAATAA < 1:19083427/35‑1 CCAGCCGTTGGCGATCCGGTTCGGCCACGGAATAA < 1:7588139/35‑1 CCAGCCGTTGGCGATCCGGTTCGGCCACGGAATAA < 1:7333455/35‑1 CAGCCGTTGGCGATCCGGTTCGGCCACGGAATAAG < 1:18848524/35‑1 CAGCCGTTGGCGATCCGGTTCGGCCACGGAATAAG > 1:4800662/1‑35 CAGCCGTTGGCGATCCGGTTCGGCCACGGAATAAG < 1:10503395/35‑1 CAGCCGTTGGCGATCCGGTTCGGCCACGGAATAAG > 1:13455727/1‑35 CAGCCGTTGGCGATCCGGTTCGGCCACGGAAAAAG > 1:19243771/1‑35 CAGCCGTTGGCGATCCGGTTCGGCCACAGAATAAG > 1:19968796/1‑35 AGCCGTTGGCGATCCGGTTCGGCCACGGAATAAGC > 1:18947937/1‑35 AGCCGTTGGCGATCCGGTTCGGCCACGGAATAAGC > 1:9833637/1‑35 AGCCGTTGGCGATCCGGTTCGGCCACGGAATAAGC < 1:5952276/35‑1 AGCCGTTGGCGATCCGGTTCGGCCACGGAATAAGC < 1:14492224/35‑1 GCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCA > 1:18049984/1‑35 GCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCA < 1:17266316/35‑1 GCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCA > 1:13290266/1‑35 GCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCA > 1:13662483/1‑35 GCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCA > 1:14908908/1‑35 GCCGTTGGCGATCCGGTTCGGCCACGGAATAAGCA > 1:3738279/1‑35 CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC < 1:13258502/35‑1 CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC < 1:6697236/35‑1 CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC < 1:3788909/35‑1 CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC < 1:8036755/35‑1 CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC > 1:15180896/1‑35 CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC < 1:19379835/35‑1 CCGTTGGCGATCCGGTTCGGCCACGGAATAAGCAC > 1:16556161/1‑35 CGTTGGCGATCCGGTTCGGCCACGGAATAAGCACT > 1:19943616/1‑35 CGTTGGCGATCCGGTTCGGCCACGGAATAAGCACT > 1:9020058/1‑35 CGTTGGCGATCAGGTTCGGCCACGGAATAAGCACT < 1:5000502/35‑1 GTTGGCGATCCGGTTCGGCCACGGAATAAGCACTT < 1:14083072/35‑1 GTTGGCGATCCGGTTCGGCCACGGAATAAGCACTT > 1:6043797/1‑35 GTTGGCGATCCGGTTCGGCCACGGAATAAGCACTT < 1:6780700/35‑1 GTTGGCGATCCGGTTCGGCCACGGAATAAGCACTT > 1:19332219/1‑35 TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT < 1:8665287/35‑1 TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT > 1:7643344/1‑35 TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT < 1:9527211/35‑1 TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT < 1:9966827/35‑1 TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT < 1:6841325/35‑1 TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT < 1:2409291/35‑1 TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT < 1:2218291/35‑1 TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT < 1:18759650/35‑1 TTGGCGATCCGGTTCGGCCACGGAATAAGCACTTT < 1:12548570/35‑1 TTGGCGATCCGGTTAGGCCACGGAATAAGCACTTT < 1:10268056/35‑1 TGGCGATCCGGTTCGGCCACGGAATAAGCACTTTA < 1:4866715/35‑1 TGGCGATCCGGTTCGGCCACGGAATAAGCACTTTA < 1:2818983/35‑1 TGGCGATCCGGTTCGGCCACGGAATAAGCACTTTA > 1:15972399/1‑35 TGGCGATCCGGTTCGGCCACGGAATAAGCACTTTA > 1:966074/1‑35 GGCGATCCGGTTCGGCCACGGAATAAGCACTTTAC < 1:7379728/35‑1 GGCGATCCGGTTCGGCCACGGAATAAGCACTTTAC < 1:19260553/35‑1 GGCGATCCGGTTCGGCCACGGAATAAGCACTTTAC < 1:17710129/35‑1 GGCGATCCGGTTCGGCCACGGAATAAGCACTTTAC < 1:11717393/35‑1 CCCCCACCCAGCCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3686144‑3686160 ‑‑‑‑‑‑‑‑cagccgttgGCGATCCGGTTCGGCCACGGAATAAGCACTTTAC > REL606/4048325‑4048358 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |