New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1609469 = | 55 (0.540) | 5 (0.060) | 3/42 | NT | 9.8% | coding (36/207 nt) | ybcW | predicted protein |
? | REL606 | 2545121 = | 44 (0.490) | coding (1259/2067 nt) | ppk | polyphosphate kinase |
Only 100 of 106 total aligned reads displayed.
TGCTATTAAGCATAGTTTTTACACGAACCTGCTCCTGGGAGGGGGCATCAGTGTATTGATCTTTATGC > REL606/1609435‑1609502 | tGCTATTAAGCATAGTTTTTACACGAACCTGCTcc < 1:13019658/35‑1 (MQ=255) tGCTATTAAGCATAGTTTTTACACGAACCTGCTcc < 1:13206818/35‑1 (MQ=255) cccggcgcagagaagataacgtgcacgcctgcttc > 1:4474336‑M1/35‑35 (MQ=255) cccggcgcagagaagataacgtgcacgcctgcttc < 1:17561066‑M1/1‑1 (MQ=255) cccggcgcagagaagataacgtgcacgcctgcttc > 1:7237557‑M1/35‑35 (MQ=255) cccggcgcagagaagataacgtgcacgcctgcttc > 1:8718516‑M1/35‑35 (MQ=255) cccggcgcagagaagataacgtgcacgcctgcttc < 1:9146927‑M1/1‑1 (MQ=255) gCTATTAAGCATAGTTTTTACACGAACCTGCTCCt > 1:4581717/1‑35 (MQ=255) gCTATTAAGCATAGTTTTTACACGAACCTGCTCCt > 1:17063752/1‑35 (MQ=255) ccggcgcagagaagataacgtgcacgcctgcttCt < 1:12677065‑M1/2‑1 (MQ=255) ccggcgcagagaagataacgtgcacgcctgcttCt < 1:11633055‑M1/2‑1 (MQ=255) ccggcgcagagaagataacgtgcacgcctgcttCt < 1:17756231‑M1/2‑1 (MQ=255) ccggcgcagagaagataacgtgcacgcctgcttCt > 1:9290921‑M1/34‑35 (MQ=255) cggcgcagagaagataacgtgcacgcctgcttCTg < 1:16874693‑M1/3‑1 (MQ=255) cggcgcagagaagataacgtgcacgcctgcttCTg > 1:13175194‑M1/33‑35 (MQ=255) cggcgcagagaagataacgtgcacgcctgcttCTg > 1:13259693‑M1/33‑35 (MQ=255) cggcgcagagaagataacgtgcacgcctgcttCTg > 1:6265230‑M1/33‑35 (MQ=255) cggcgcagagaagataacgtgcacgcctgcttCTg < 1:1236060‑M1/3‑1 (MQ=255) cggcgcagagaagataacgtgcacgcctgcttCTg > 1:18488758‑M1/33‑35 (MQ=255) cggcgcagagaagataacgtgcacgcctgcttCTg > 1:16068402‑M1/33‑35 (MQ=255) ggcgcagagaagataacgtgcacgcctgcttCTgg < 1:8241151‑M1/4‑1 (MQ=255) ggcgcagagaagataacgtgcacgcctgcttCTgg < 1:11960714‑M1/4‑1 (MQ=255) ggcgcagagaagataacgtgcacgcctgcttCTgg < 1:8438448‑M1/4‑1 (MQ=255) ggcgcagagaagataacgtgcacgcctgcttCTgg < 1:16472067‑M1/4‑1 (MQ=255) gcgcagagaagataacgtgcacgcctgcttCtggt < 1:19660272‑M1/5‑2 (MQ=255) gcgcagagaagataacgtgcacgcctgcttCTggg < 1:7420024‑M1/5‑1 (MQ=255) ttAAGCATAGTTTTTACACGAACCTGCTCCTGGGa > 1:2363638/1‑35 (MQ=255) ttAAGCATAGTTTTTACACGAACCTGCTCCTGGGa > 1:18042204/1‑35 (MQ=255) cgcagagaaggtaacgtgcacgcctgcttCTGGGa < 1:10785066‑M1/6‑1 (MQ=255) cgcagagaagataacgtgcacgcctgcttctggca < 1:9413159‑M1/6‑3 (MQ=255) cgcagagaagataacgtgcacgcctgcttctggca < 1:5585775‑M1/6‑3 (MQ=255) cgcagagaagataacgtgcacgcctgcttCTGGGa < 1:3755660‑M1/6‑1 (MQ=255) tAAGCATAGTTTTTACACGAACCTGCTCCTGGGAg < 1:9473035/35‑1 (MQ=255) gcagagaagataacgtgcacgcctgcttctggcag < 1:16247093‑M1/7‑4 (MQ=255) gcagagaagataacgtgcacgcctgcttCTGGGAg < 1:1431097‑M1/7‑1 (MQ=255) gcagagaagataacgtgcacgcctgcttCTGGGAg < 1:9277082‑M1/7‑1 (MQ=255) cagagaagataacgtgcacgcctgcttctgggcgg < 1:3444392‑M1/8‑4 (MQ=255) cagagaagataacgtgcacgcctgcttCTGGCAgg < 1:10828342‑M1/8‑1 (MQ=255) aaGCATAGTTTTTACACGAACCTGCTCCTGGGAgg > 1:14869789/1‑35 (MQ=255) agagaagataacgtgcacgcctgcttCTGGCAggg < 1:17710880‑M1/9‑1 (MQ=255) aGCATAGTTTTTACACGAACCTGCTCCTGGGAgtg > 1:4589761/1‑33 (MQ=255) aGCATAGTTTTTACACGAACCTGCTCCTGGGAggg < 1:11252169/35‑1 (MQ=255) gagaagataacgtgcacgcctgcttCTGGGAgggg < 1:6756755‑M1/10‑1 (MQ=255) gCATAGTTTTTACACGAACGTGCTCCTGGGAgggg < 1:10554845/35‑1 (MQ=255) gCATAGTTTTTACACGAACCTGCTCCTGGGAggtg > 1:532904/1‑33 (MQ=255) gCATAGTTTTTACACGAACCTGCTCCTGGGAgggg > 1:19555683/1‑35 (MQ=255) gCATAGTTTTTACACGAACCTGCTCCTGGGAgggg > 1:16985945/1‑35 (MQ=255) gCATAGTTTTTACACGAACCTGCTCCTGGGAgggg > 1:13242842/1‑35 (MQ=255) cATAGTTTTTACACGAACCTGCTCCTGGGAggggg < 1:7817791/35‑1 (MQ=255) agaagataacgtgcacgcctgcttCTGggaggcgg < 1:10682974‑M1/11‑4 (MQ=255) agaagataacgtgcacgcctgcttCTGGGAggggg < 1:9340590‑M1/11‑1 (MQ=255) agaagataacgtgcacgcctgcttCTGGCaggggc < 1:6431477‑M1/11‑2 (MQ=255) agaagataacgtgcacgcctgcttCTGGCAggggg < 1:9476731‑M1/11‑1 (MQ=255) aTAGTTTTTACACGAACCTGCTCCTGGGAGGGGGc < 1:13776609/35‑1 (MQ=255) aTAGTTTTTACACGAACCTGCTCCTGGGAGGGGGc > 1:36649/1‑35 (MQ=255) aTAGTTTTTACACGAACCTGCTCCTGGGAGGGGGc < 1:306470/35‑1 (MQ=255) tattttttACACGAACCTGCTCCTGGGAGGGGGCa > 1:15348551/4‑35 (MQ=255) aGTTTTTACACGAACCTGCTCCTGGGAGGGGGCAt > 1:3068995/1‑35 (MQ=255) aGTTTTTACACGAACCTGCTCCTGGGAGGGGGCAt > 1:7997592/1‑35 (MQ=255) gTTTTTACACGAACCTGCTCCTGGGAGGGGGCATc < 1:14708515/35‑1 (MQ=255) gTTTTTACACGAACCTGCTCCTGGGAGGGGGCATc < 1:1885684/35‑1 (MQ=255) tttttACACGAACCTGCTCCTGGGAGGGGGCATCa < 1:4797910/35‑1 (MQ=255) tttttACACGAACCTGCTCCTGGGAGGGGGCATCa < 1:2905582/35‑1 (MQ=255) tttttACACGAACCTGCTCCTGGGAGGGGGCATCa < 1:12883241/35‑1 (MQ=255) ttttACACGAACCTGCTCCTGGGAGGGGGCATCAg > 1:4730519/1‑35 (MQ=255) ttttACACGAACCTGCTCCTGGGAGGGGGCATCAg > 1:17755640/1‑35 (MQ=255) ttttACACGAACCTGCTCCTGGGAGGGGGCATCAg < 1:13703895/35‑1 (MQ=255) tttACACGAACCTGCTCCTGGGAGGGTGCATCAgt > 1:14601140/1‑35 (MQ=255) tttACACGAACCTGCTCCTGGGAGGGGGCATCAgt > 1:19957603/1‑35 (MQ=255) ttACACGAACCTGCTCCTGGGAGGGGGCATCAgtg < 1:39997/35‑1 (MQ=255) tACACGAACCTGCTCCTGGGAGGGGGCATCAgtgt > 1:10086064/1‑35 (MQ=255) tACACGAACCTGCTCCTGGGAGGGGGCATCAgtgt < 1:10895820/35‑1 (MQ=255) actcGAACCTGCTCCTGGGAGGGGGCATCAGTGTa < 1:4556310/32‑1 (MQ=255) acacGAACCTGCTCCTGGGAGGGGGCATCAGTGTa < 1:3850793/35‑1 (MQ=255) acacGAACCTGCTCCTGGGAGGGGGCATCAGTGTa < 1:18789737/35‑1 (MQ=255) acacGAACCTGCTCCTGGGAGGGGGCATCAGTGTa < 1:1814608/35‑1 (MQ=255) acacGAACCTGCTCCTGGGAGGGGGCATCAGTGTa > 1:3049716/1‑35 (MQ=255) acacGAACCTGCTCCTGGGAGGGGGCATCAGTGTa < 1:11739926/35‑1 (MQ=255) acacGAACCTGCTACTGGGAGGGGGCATCAGTGTa < 1:8292657/35‑1 (MQ=255) cacGAACCTGCTCCTGGGAGGGGGCATCAGTGTAt < 1:19415824/35‑1 (MQ=255) cacGAACCTGCTCCTGGGAGGGGGAATCAGTGTAt < 1:3562074/35‑1 (MQ=255) cGAACCTGCTCCTGGGAGGGGGCATCAGTGTATTg < 1:14251710/35‑1 (MQ=255) cGAACCTGCTCCTGGGAGGGGGCATCAGTGTATTg > 1:10935525/1‑35 (MQ=255) cGAACCTGCTCCTGGGAGGGGGCATCAGTGTATTg > 1:12668049/1‑35 (MQ=255) gAACCTGCTCCTGTGAGGGGGCATCAGTGTATTGa > 1:4454987/1‑35 (MQ=255) gAACCTGCTCCTGGGAGGGGGCATCAGTGTATTGa < 1:10067973/35‑1 (MQ=255) gAACCTGCTCCTGGGAGGGGGCATCAGTGTATTGa > 1:11360723/1‑35 (MQ=255) aaCCTGCTCCTGGGAGGGGGCATCAGTGTATTGAt < 1:5768589/35‑1 (MQ=255) aCCTGCTCCTGGGAGGGGGCATCAGTGTATTGATc > 1:16583553/1‑35 (MQ=255) aCCTGCTCCTGGGAGGGGGCATCAGTGTATTGATc < 1:11138371/35‑1 (MQ=255) aCCTGCTCCTGGGAGGGGGCATCAGTGTATTGATc > 1:8683256/1‑35 (MQ=255) aCCTGCTCCTGGGACGGGGCATCAGTGTATTGATc > 1:11049991/1‑35 (MQ=255) cTGCTCCTGGGAGGGGGCATCAGTGTATTGATCtt > 1:18234259/1‑35 (MQ=255) tGCTCCTGGGAGGGGGCATCAGTGTATTGATCttt > 1:2869741/1‑35 (MQ=255) tGCTCCTGGGAGGGGGCATCAGTGTATTGATCttt > 1:386796/1‑35 (MQ=255) cTCCTGGGAGGGGGCATCAGTGTATTGATCTTTAt > 1:19847084/1‑35 (MQ=255) tCCTGGGAGGGGGCATCAGTGTATTGATCTTTATg > 1:13541955/1‑35 (MQ=255) tCCTGGGAGGGGGCATCAGTGTATTGATCTTTATg > 1:16445844/1‑35 (MQ=255) tCCTGGGAGGGGGCATCAGTGTATTGATCTTTATg > 1:162406/1‑35 (MQ=255) ccTGGGAGGGGGCATCAGTGTATTGATCTTTATGc < 1:10486993/35‑1 (MQ=255) | TGCTATTAAGCATAGTTTTTACACGAACCTGCTCCTGGGAGGGGGCATCAGTGTATTGATCTTTATGC > REL606/1609435‑1609502 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |