New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3615477 = | 121 (1.180) | 11 (0.110) | 4/48 | NT | 10.1% | coding (3189/3474 nt) | bcsC | cellulose synthase subunit |
? | REL606 | = 3947083 | 74 (0.720) | coding (724/1656 nt) | aslA | acrylsulfatase‑like enzyme |
Only 100 of 215 total aligned reads displayed.
TCGGGATCAGATTCATCAGCGGATAACGCGGCATGGTTTTGGTGCGTGAATGCGACCACGAGCCAGACG > REL606/3615443‑3615511 | tcggGATCAGATTCATCAGCGGATAACGCGGCATg < 1:8233938/35‑1 (MQ=255) tcggGATCAGATTCATCAGCGGATAACGCGGCATg > 1:18344935/1‑35 (MQ=255) tcggGATCAGATTCATCAGCGGATAACGCGGCATg > 1:19033080/1‑35 (MQ=255) tcggGATCAGATTCATCAGCGGATAACGCGGCATg < 1:5306821/35‑1 (MQ=255) gcacggcatgaacgtcatctttgctgaacggcagg < 1:4638967‑M1/1‑1 (MQ=255) cggGATCAGATTCATCAGCGGATAACGCGGCATgg < 1:15217595/35‑1 (MQ=255) cacggcatgaacgtcatctttgctgaacggcaggg < 1:757128‑M1/2‑1 (MQ=255) cacggcatgaacgtcatctttgctgaacggcaggg < 1:12131706‑M1/2‑1 (MQ=255) cacggcatgaacgtcatctttgctgaacggcaggg < 1:6411379‑M1/2‑1 (MQ=255) cacggcatgaacgtcatctttgctgaacggcaggg < 1:4069072‑M1/2‑1 (MQ=255) cacggcatgaacgtcatctttgctgaacggcaggg < 1:6600737‑M1/2‑1 (MQ=255) cacggcatgaacgtcatctttgctgaacggcaggg < 1:10309945‑M1/2‑1 (MQ=255) gggATCAGATTCATCAGCGGATAACGCTGCATGGt > 1:11704219/1‑35 (MQ=255) gggATCAGATTCATCAGCGGATAACGCGGCATGGt < 1:14625854/35‑1 (MQ=255) gggATCAGATTCATCAGCGGATAACGCGGCATGGt < 1:1568492/35‑1 (MQ=255) gggATCAGATTCATCAGCGGATAACGCGGCATGGt < 1:20430572/35‑1 (MQ=255) acggcatgaacgtcatctttgctgaacggcagggg < 1:16518166‑M1/3‑2 (MQ=255) acggcatgaacgtcatctttgctgaacggcagggg < 1:3412097‑M1/3‑2 (MQ=255) acggcatgaacgtcatctttgctgaacggcagGGt < 1:3757545‑M1/3‑1 (MQ=255) ggATCAGATTCATCAGCGGATAACGCGGCATGGtt < 1:19864177/35‑1 (MQ=255) ggATCAGATTCATCAGCGGATAACGCGGCATGGtt < 1:3812773/35‑1 (MQ=255) ggATCAGATTCATCAGCGGATAACGCGGCATGGtt > 1:4031735/1‑35 (MQ=255) ggATCAGATTCATCAGCGGATAACGCGGCATGGtt < 1:4442218/35‑1 (MQ=255) ggATCAGATTCATCAGCGGATAACGCGGCATGGtt > 1:14440732/1‑35 (MQ=255) ggATCAGATTCATCAGCGGATAACGCGGCATGGtt > 1:1112865/1‑35 (MQ=255) ggATCAGATTCATAAGCGGATAACGCGGCATGGtt < 1:6192847/35‑1 (MQ=255) cggcatgaacgtcatctttgctgaacggcaggggt < 1:17752810‑M1/4‑3 (MQ=255) ggcatgaacgtcatctttgctgaacggcaggggtt < 1:10025650‑M1/5‑4 (MQ=255) ggcatgaacgtcatctttgctgaacggcagggggt < 1:13436441‑M1/5‑4 (MQ=255) ggcatgaacgtcatctttgctgaacggcagGGttt < 1:4124910‑M1/5‑1 (MQ=255) gATCAGATTCATCAGCGGATAACGCGGCATGGttt < 1:11278470/35‑1 (MQ=255) gATCAGATTCATCAGCGGATAACGCGGCATGGttt < 1:2290300/35‑1 (MQ=255) gATCAGATTCATCAGCGGATAACGCGGCATGGttt > 1:17363205/1‑35 (MQ=255) gATCAGATTCATCAGCGGATAACGCGGCATCGttt > 1:6086143/1‑35 (MQ=255) tCAGATTCATCAGCGGATAACGCGGCATGGTTTTg < 1:14216808/35‑1 (MQ=255) tCAGATTCATCAGCGGATAACGCGGCATGGTTTTg > 1:13869694/1‑35 (MQ=255) tCAGATTCATCAGCGGATAACGCGGCATGGTTTTg > 1:7666771/1‑35 (MQ=255) tCAGATTCATCAGCGGATAACGCGGCATGGTTTTg < 1:5679561/35‑1 (MQ=255) cAGATTCATCAGCGGATAACGCGGCATGGTTTTgg < 1:9512767/35‑1 (MQ=255) aGATTCATCAGCGGATAACGCGGCATGGTTTTGGt > 1:2746637/1‑35 (MQ=255) gATTCATCAGCGGATAACGCGGCATGGTTTTgggg > 1:8339335/1‑33 (MQ=255) gATTCATCAGCGGATAACGCGGCATGGTTTTGGTg > 1:18803602/1‑35 (MQ=255) aacgtcatctttgctgaacggcagGGTtttggcgg < 1:16076943‑M1/11‑4 (MQ=255) aacgtcatctttgctgaacggcagGGGTTTGGtgg < 1:15384373‑M1/11‑2 (MQ=255) aTTCATCAGCGGATAACGCGGCATGGTTTTGGTGc > 1:13130302/1‑35 (MQ=255) catcaGCTGATAACGCGGCATGGTTTTGGTGCGTg > 1:363723/1‑35 (MQ=255) catcaGCGGATAACGCGGCATGGTTTTGGTGCGTg > 1:6635360/1‑35 (MQ=255) catcaGCGGATAACGCGGCATGGTTTTGGTGCGTg < 1:7332532/35‑1 (MQ=255) catcaGCGGATAACGCGGCATGGTTTTGGTGCGTg < 1:9241500/35‑1 (MQ=255) atcaGAGGATAACGCGGCATGGTTTTGGTGCGTGa < 1:13035196/35‑1 (MQ=255) tcaGCGGATAACGCGGCATGGTTTTGGTGCGTGaa < 1:10099916/35‑1 (MQ=255) tcaGCGGATAACGCGGCATGGTTTTGGTGCGTGaa > 1:2828948/1‑35 (MQ=255) caGCGGATAACGCGGCATGGTTTTGGTGCGTGAAt > 1:6896359/1‑35 (MQ=255) caGCGGATAACGCGGCATGGTTTTGGTGCGTGAAt < 1:12172077/35‑1 (MQ=255) caGCGGATAACGCGGCATGGTTTTGGTGCGTGAAt > 1:17276198/1‑35 (MQ=255) caGCGGATAACGCGGCATGGTTTTGGTGCGTGAAt > 1:16247517/1‑35 (MQ=255) aGCGGATAACGCGGCATGGTTTTGGTGCGTGAATg > 1:13499483/1‑35 (MQ=255) aGCGGATAACGCGGCATGGTTTTGGTGCGTGAATg < 1:2480730/35‑1 (MQ=255) aGCCGATAACGCGGCATGGTTTTGGTGCGTGAATg < 1:16580276/35‑1 (MQ=255) cGGATAACGCGGCATGGTTTTGGTGCGTGAATGCg < 1:10723484/35‑1 (MQ=255) cGGATAACGCGGCATGGTTTTGGTGCGTGAATGCg < 1:9876087/35‑1 (MQ=255) ggATAACGCGGCATGGTTTTGGTGCGTGAATGCGa < 1:13175433/35‑1 (MQ=255) ggATAACGCGGCATGGTTTTGGTGCGTGAATGCGa > 1:6307615/1‑35 (MQ=255) ggATAACGCGGCATGGTTTTGGTGCGTGAATGCGa > 1:19615824/1‑35 (MQ=255) ggATAACGCGGCATGGTTTTGGTGCGTGAATGCGa > 1:12415727/1‑35 (MQ=255) gATAACGCGGCATGGTTTTGGTGCGTGAATGCGAc < 1:2653149/35‑1 (MQ=255) gATAACGCGGCATGGTTTTGGTGCGTGAATGCGAc < 1:13345717/35‑1 (MQ=255) gATAACGCGGCATGGTTTTGGTGCGTGAATGCGAc < 1:16865485/35‑1 (MQ=255) aTAACGCGGCATGGTTTTGGTGCGTGAATGCGAcc > 1:10190291/1‑35 (MQ=255) aTAACGCGGCATGGTTTTGGTGCGTGAATGCGAcc > 1:14155255/1‑35 (MQ=255) tAACGCGGCATGGTTTTGGTGCGTGAATGCGACCa > 1:11497830/1‑35 (MQ=255) tAACGCGGCATGGTTTTGGTGCGTGAATGCGACCa < 1:5061280/35‑1 (MQ=255) tAACGCGGCATGGTTTTGGTGCGTGAATGCGACCa < 1:4832280/35‑1 (MQ=255) aaCGCGGCATGGTTTTGGTGCGTGAATGCGACCAc < 1:7952782/35‑1 (MQ=255) aaCGCGGCATGGTTTTGGTGCGTGAATGCGACCAc < 1:20494777/35‑1 (MQ=255) aaCGCGGCATGGTTTTGGTGCGTGAATGCGACCAc < 1:18096819/35‑1 (MQ=255) aaCGCGGCATGGTTTTGGTGCGTGAATGCGACCAc > 1:18307843/1‑35 (MQ=255) cgcgGCATGGTTTTGGTGCGTGAATGCGACCACGa < 1:20119921/35‑1 (MQ=255) cgcgGCATGGTTTTGGTGCGTGAATGCGACCACGa > 1:9650776/1‑35 (MQ=255) cgcgGCATGGTTTTGGTGCGTGAATGCGACCACGa < 1:3192784/35‑1 (MQ=255) gcgGCATGGTTTTGGTGCGTGAATGCGACCACGAg < 1:676851/35‑1 (MQ=255) gcgGCATGGTTTTGGTGCGTGAATGCGACCACGAg > 1:12704864/1‑35 (MQ=255) cgGCATGGTTTTGGTGCGTGAATGCGACCACGAGc < 1:13604333/35‑1 (MQ=255) cgGCATGGTTTTGGTGCGTGAATGCGACCACGAGc > 1:8875660/1‑35 (MQ=255) cgGCATGGTTTTGGTGCGTGAATGCGACCACGAGc < 1:18203563/35‑1 (MQ=255) cgGCATGGTTTTGGTGCGTGAATGCGACCACGAGc > 1:19629687/1‑35 (MQ=255) ggCATGGTTTTGGTGCGTGAATGCGACCACGAGcc < 1:9846322/35‑1 (MQ=255) ggCATGGTTTTGGTGCGTGAATGCGACCACGAGcc > 1:8547106/1‑35 (MQ=255) ggCATGGTTTTGGTGCGTGAATGCGACCACGAGcc > 1:19243871/1‑35 (MQ=255) ggCATGGTTTTGGTGCGTGAATGCGACAACGAGcc < 1:7309393/35‑1 (MQ=255) cATGGTTTTGGTGCGTGAATGCGACCACGAGCCAg > 1:5534126/1‑35 (MQ=255) cATGGTTTTGGTGCGTGAATGCGACCACGAGCCAg > 1:16197828/1‑35 (MQ=255) cATGGTTTTGGTGCGTGAATGCGACCACGAGCCAg > 1:9366267/1‑35 (MQ=255) aTGGTTTTGGTGCGTGAATGCGACCACGAGCCAGa > 1:14810216/1‑35 (MQ=255) aTGGTTTTGGTGCGTGAATGCGACCACGAGCCAGa > 1:15069997/1‑35 (MQ=255) aTGGTTTTGGTGCGTGAATGCGACAAGGAGCCAGa > 1:927562/1‑35 (MQ=37) tGGTTTTGGTGCGTGAATGCGACCACGAGCCAGAc > 1:12563979/1‑35 (MQ=255) tGGTTTTGGTGCGTGAATGCGACCACGAGCCAGAc < 1:18574849/35‑1 (MQ=255) tGGTTTTGGTGCGTGAATGCGACCACGAGCCAGAc < 1:6966717/35‑1 (MQ=255) ggTTTTGGTGCGTGAATGCGACCACGAGCCAGACg > 1:9025100/1‑35 (MQ=255) | TCGGGATCAGATTCATCAGCGGATAACGCGGCATGGTTTTGGTGCGTGAATGCGACCACGAGCCAGACG > REL606/3615443‑3615511 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |