New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 327441 =112 (1.090)14 (0.140) 5/48 NT 14.4% intergenic (+199/‑37) prpE/codB predicted propionyl‑CoA synthetase with ATPase domain/cytosine transporter
?REL606 1238616 = 54 (0.530)coding (896/1299 nt) dadA D‑amino acid dehydrogenase small subunit

TGAAACCCAAAAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/327455‑327441
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCGCCATTACCCGTTTCGATAACCGCATTCGTGT  >  REL606/1238616‑1238649
                                                 
atAAACCCAAAAAATTCGCCATTACCCGTTTCGAT                <  1:993304/33‑1
 tAAACCCAAAAAAATCGCCATTACCCGTTTCGATA               <  1:10398839/34‑1
   AACCCAAAAAATTCGCCATTACCCGTTTCGATAAC             <  1:6673431/35‑1
   AACCCAAAAAAATCGCCATTACCCGTTTCGATAAC             <  1:9947107/35‑1
    ACCCAAAAAATTCGCCATTACCCGTTTCGATAACC            <  1:17547192/35‑1
    ACCCAAAAAATTCGCCATTACCCGTTTCGATAACC            <  1:9216358/35‑1
    ACCCAAAAAATTCGCCATTACCCGTTTCGATAACC            <  1:5918530/35‑1
     CCCAAAAAATTCGCCATTACCCGTTTCGATAACCG           <  1:18675674/35‑1
     CCCAAAAAATTCGCCATTACCCGTTTCGATAACCG           <  1:5069163/35‑1
        tAAAAATTCGCCATTACCCGTTTCGATAACCGCAT        <  1:9143273/34‑1
        AAAAAATTCGCCATTACCCGTTTCGATAACCGCAT        <  1:3065550/35‑1
        AAAAAATTCGCCATTACCCGTTTCGATAACCGCAT        <  1:454845/35‑1
         AAAAATTCGCCATTACCCGTTTCGATAACCGCATT       <  1:2820629/35‑1
         AAAAATTCGCCATTACCCGTTTCGATAACCGCATT       <  1:11939163/35‑1
          AAAATTCGCCATTACCCGTTTCGATAACCGCATTC      <  1:16842277/35‑1
          AAAATTCGCCATTACCCGTTTCGATAACCGCATTC      <  1:5708027/35‑1
          AAAATTCGCCATTACCCGTTTCGATAACCGCATTC      <  1:13836290/35‑1
            AATTCGCCATTACCCGTTTCGATAACCGCATTCGT    <  1:11655752/35‑1
            AATTCGCCATTACCCGTTTCGATAACCGCATTCGT    <  1:6943466/35‑1
             ATTCGCCATTACCCGTTTCGATAACCGCATTCGTG   <  1:4687762/35‑1
              TTCGCCATTACCCGTTTCGATAACCGCATTCGTGT  <  1:5522866/35‑1
              TTCGCCATTACCCGTTTCGATAACCGCATTCGTGT  <  1:17861928/35‑1
                                                 
TGAAACCCAAAAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/327455‑327441
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCGCCATTACCCGTTTCGATAACCGCATTCGTGT  >  REL606/1238616‑1238649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.