New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 583407 | 44 (0.430) | 12 (0.160) | 3/34 | NT | 15.9% | coding (546/1377 nt) | pheP | phenylalanine transporter |
? | REL606 | 3882315 = | 96 (1.320) | coding (103/816 nt) | atpB | F0F1 ATP synthase subunit A |
CGATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAG > REL606/583373‑583439 | cGATCATCGGTATGATCGGCTTTGGCCTGTGGCTG < 1:7977722‑M1/35‑1 (MQ=255) cGATCATCGGTATGATCGGCTTTGGCCTGTGGCTG < 1:13238033‑M1/35‑1 (MQ=255) gATCATCGGTATGATCGGCTTTGGCCTGTGgctgc < 1:7367029/35‑1 (MQ=255) gATCATCGGTATGATCGGCTTTGGCCTGGGGCTGg > 1:10957634‑M1/1‑34 (MQ=255) gATCATCGGTATGATCGGCTTTGGACTGTGgctgc < 1:1272912/35‑1 (MQ=255) atcatcGGTATGATCGGCTTTGGCCTGTGgctgct < 1:5617868/35‑1 (MQ=255) tcatcGGTATGATCGGCTTTTGCCTCGGgctgggg > 1:805306/1‑32 (MQ=19) tcatcGGTATGATCGGCTTTGGCCTGTGGctgctg < 1:13727914/35‑1 (MQ=255) tcatcGGTATGATCGGCTTTGGCCTGTGGCTGggg > 1:594318‑M1/1‑32 (MQ=255) tcatcGGTATGATCGGCTTTGGCCTGTGGCTGggg > 1:11887501‑M1/1‑32 (MQ=255) tcatcGGTATGATCGGCTTTGGCCTGTGGCTGatg < 1:4772216‑M1/35‑4 (MQ=255) catcGGTATGATCGGCTTTGGCCTGTGGCTGCTGt < 1:7986432/35‑1 (MQ=255) catcGGTATGATCGGCTTTGGCCTGTGGCTGCTGt < 1:11367961/35‑1 (MQ=255) catcGGTATGATCGGCTTTGGCCTGTGGCTGCTGt < 1:15854483/35‑1 (MQ=255) atcGGTATGATCGGCTTTGGCATGTGGCTGCTGtt < 1:17148579/35‑1 (MQ=255) tcGGTATGATCGGCTTTGGCCTGTGGCTGCTGttt < 1:12364311/35‑1 (MQ=255) tcGGTATGATCGGCTTTGGCCTGTGGCTGCTGttt < 1:9360493/35‑1 (MQ=255) tcGGTATGATCGGCTTTGGCCTGTGGCTGCTGttt < 1:6776550/35‑1 (MQ=255) cGGTATGATCGGCTTTGGCCTGTGGCTGgggggtt > 1:9099797‑M1/1‑28 (MQ=255) cGGTATGATCGGCTTTGGCCTGTGGCTGCTGtttt < 1:1275773/35‑1 (MQ=255) cGGTATGATCGGCTTTGGCCTGTGGCTGCTGtttt < 1:11652279/35‑1 (MQ=255) ggTATGATCGGCTTTGGCCTGTGGCTGggggtttt > 1:17608560‑M1/1‑27 (MQ=255) ggTATGATCGGCTTTGGCCTGTGGCTGggggtttt > 1:19584172‑M1/1‑27 (MQ=255) ggTATGATCGGCTTTGGCCTGTGGCTGggggtttt > 1:13775473‑M1/1‑27 (MQ=255) ggTATGATCGGATTTGGCCTGTGGCTGCTGTTTTc < 1:17576143/35‑1 (MQ=255) ggTATGATCGCCTTTGGCCTGTGGCTGCTGTTTTc < 1:20444143/35‑1 (MQ=255) gTATGATCGGCTTTGGCCTGTGGCTGgggggtttt > 1:10356438‑M1/1‑26 (MQ=255) gTATGATCGGCTTTGGCCTGTGGCTGgggggtttt > 1:6758062‑M1/1‑26 (MQ=255) gTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCt < 1:15424440/35‑1 (MQ=255) tATGATCGGCTTTGGCCTGTGGCTGgggggttttt > 1:1368012‑M1/1‑25 (MQ=255) tATGATCGGCTTTGGCCTGTGGCTGgggggttttt > 1:14595613‑M1/1‑25 (MQ=255) tATGATCGGCTTTGGCCTGTGGCTGgggggttttt > 1:10956825‑M1/1‑25 (MQ=255) tATGATCGGCTTTGGCCTGTGGCTGGTGgtttttt > 1:15972898/1‑32 (MQ=21) tATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTg < 1:2882694/35‑1 (MQ=255) tATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTg < 1:13703994/35‑1 (MQ=255) tATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTg < 1:9702479/35‑1 (MQ=255) aTGATCGGCTTTGGCCTGTGGCTGgggggtttttg > 1:11917454‑M1/1‑24 (MQ=255) aTGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTgg < 1:15206209/35‑1 (MQ=255) aTGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTgg < 1:17804915/35‑1 (MQ=255) aTGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTgg < 1:5393821/35‑1 (MQ=255) tGATCGGCTTTGGCCTGTGGCTGgggggttttttt > 1:19089739‑M1/1‑23 (MQ=255) tGATCGGCTTTGGCCTGTGGCTGgggggttttttt > 1:19733766‑M1/1‑23 (MQ=255) gATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTc < 1:15126999/35‑1 (MQ=255) gATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTc < 1:1756692/35‑1 (MQ=255) gATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTc < 1:11165223/35‑1 (MQ=255) aTCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCa < 1:15037023/35‑1 (MQ=255) aTCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCa < 1:10701239/35‑1 (MQ=255) tCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCAc < 1:14268848/35‑1 (MQ=255) cGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCAcg < 1:6570873/35‑1 (MQ=255) cGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCAcg < 1:366304/35‑1 (MQ=255) cGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCAcg < 1:10051806/35‑1 (MQ=255) cGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCAcg < 1:1234360/35‑1 (MQ=255) cGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCAcg < 1:13394086/35‑1 (MQ=255) ggCTTTGGCCTGTGGCTGCTGTTTTCTGGTCAcgg < 1:9943335/35‑1 (MQ=255) ggCTTTGGCCTGTGGCTGCTGTTTTCTGGTCAcgg < 1:32818/35‑1 (MQ=255) ggCTTTGGCCTGTGGCTGCTGTTTTCTGGTCAcgg < 1:12151861/35‑1 (MQ=255) ggCTTTGGCCTGTGGCTGCTGTTTTCTGGTCAcgg < 1:15510590/35‑1 (MQ=255) cTTTGGCCTGTGGCTGCTGTTTTCTGGTCAcggcg < 1:18656259/35‑1 (MQ=255) cTTTGGCCTGTGGCTGCTGTTTTCTGGTCAcggcg < 1:16064728/35‑1 (MQ=255) tttGGCCTGTGGCTGCTGTTTTCTGGTCAcggcgg < 1:18454327/35‑1 (MQ=255) gCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCgag < 1:20592477/35‑1 (MQ=255) gCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCgag < 1:19016465/35‑1 (MQ=255) ccTGTGGCTGCTGTTTTCTGGTCACGGCGGCgaga < 1:17149876/35‑1 (MQ=255) cTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGaa < 1:11732715/35‑1 (MQ=255) cTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGaa < 1:9154421/35‑1 (MQ=255) cTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGaa < 1:20167288/35‑1 (MQ=255) tgtgGCTGCTGTTTTCTGGTCACGGCGGCGAGaaa < 1:7062538/35‑1 (MQ=255) tgtgGCTGCTGTTTTCTGGTCACGGCGGCGAGaaa < 1:6238002/35‑1 (MQ=255) gtgGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAg < 1:7118641/35‑1 (MQ=255) gtgGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAg < 1:7627250/35‑1 (MQ=255) tgGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGc < 1:13795853/35‑1 (MQ=255) ggCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGcc < 1:7499517/35‑1 (MQ=255) ggCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGcc < 1:20059604/35‑1 (MQ=255) gctgctGTTTTCTGGTCACGGCGGCGAGAAAGCCa < 1:14205882/35‑1 (MQ=255) gctgctGTTTTCTGGTCACGGCGGCGAGAAAGCCa < 1:8197373/35‑1 (MQ=255) gctgctGTTTTCTGGTCACGGCGGCGAGAAAGCCa < 1:9081105/35‑1 (MQ=255) gctgctGTTTTCTGGTCACGGCGGCGAGAAAGCCa < 1:4871900/35‑1 (MQ=255) ctgctgTTTTCTGGTCACGGCGGCGAGAAAGCCAg < 1:14235308/35‑1 (MQ=255) ctgctgTTTTCTGGTCACGGCGGCGAGAAAGCCAg < 1:18522538/35‑1 (MQ=255) ctgctgTTTTCTGGTCACGGCGGCGAGAAAGCCAg < 1:3880591/35‑1 (MQ=255) | CGATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAG > REL606/583373‑583439 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |