New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 471760 = | 64 (0.620) | 13 (0.140) | 5/42 | NT | 15.0% | coding (281/960 nt) | aes | acetyl esterase |
? | REL606 | 3912266 = | 91 (1.010) | intergenic (+46/‑94) | ilvL/ilvG | ilvG operon leader peptide/acetolactate synthase II, valine insensitive, large subunit |
Only 100 of 136 total aligned reads displayed.
GCGATCGTGGGTATCGAGATTGCCGAGAATAAAACCGCCTCCATGCAAATAAAATAGCGTCGCCGGGCT > REL606/471726‑471794 | gCGATCGTGGGTATCGAGATTGCCGAGAATAAAAc > 1:8912409/1‑35 (MQ=255) ctaTCGTGGGTATCGAGATTGCCGAGAATAAAAcc < 1:15534548/33‑1 (MQ=255) cGATCGTGGGTATCGAGATTGCCGAGAATAAAAcc < 1:4306152/35‑1 (MQ=255) cGATCGTGGGTATCGAGATTGCCGAGAATAAAAcc > 1:8665231/1‑35 (MQ=255) gATCGTGGGTATCGAGATTGCCGAGAATAAAACCg > 1:13412588/1‑35 (MQ=255) gATCGTGGGTATCGAGATTGCCGAGAATAAAACCg > 1:16509777/1‑35 (MQ=255) gATCGTGGGTATCGAGATTGCCGAGAATAAAACCg > 1:7921995/1‑35 (MQ=255) aTCGTGGGTATCGAGATTGCCGAGAATAAAACCGc > 1:5484833/1‑35 (MQ=255) aTCGTGGGTATCGAGATTGCCGAGAATAAAACCGc > 1:13073408/1‑35 (MQ=255) tCGTTGGTATCGAGATTGCCGAGAATAAAACCGcc > 1:16011673/1‑35 (MQ=255) tCGTGGGTATCGAGATTGCCGAGAATAAAACCGcc > 1:8958492/1‑35 (MQ=255) cGTGGGTATCGAGATTGCCGAGAATAAAACCGCCt > 1:11843200/1‑35 (MQ=255) cGTGGGTATCGAGATTGCCGAGAATAAAACCGCCt > 1:16269068/1‑35 (MQ=255) cGTGGGTATCGAGATTGCCGAGAATAAAACCGCCt > 1:14004294/1‑35 (MQ=255) cGTGGGTATCGAGATTGCCGAGAATAAAACCGCCt > 1:10158395/1‑35 (MQ=255) gTGGGTATCGAGATTGCCGAGAATAAAACCGCCTc > 1:16900160/1‑35 (MQ=255) gTGGGTATCGAGATTGCCGAGAATAAAACCGCCTc > 1:16645217/1‑35 (MQ=255) gTGGGTATCGAGATTGCCGAGAATAAAACCGCCTc > 1:16947650/1‑35 (MQ=255) gTGGGTATCGAGATTGCCGAGAATAAAACCGCCTc > 1:10744966/1‑35 (MQ=255) tGGGTATCGAGATTGCCGAGAATAAAACCGCCTcc > 1:2678592/1‑35 (MQ=255) tGGGTATCGAGATTGCCGAGAATAAAACCGCCTcc > 1:2476354/1‑35 (MQ=255) gggTATCGAGATTGCCGAGAATAAAACCGCCTCCa > 1:15048584/1‑35 (MQ=255) ggTATCGAGATTGCCGAGAATAAAACCGCCTCCAt > 1:18365971/1‑35 (MQ=255) ggTATCGAGATTGCCGAGAATAAAACCGCCTCCAt > 1:4570771/1‑35 (MQ=255) ggTATCGAGATTGCCGAGAATAAAACCGCCTCCAt > 1:18756084/1‑35 (MQ=255) gTATCGAGATTGCCGAGAATAAAACGGCCTCCATg > 1:5217269/1‑35 (MQ=255) gTATCGAGATTGCCGAGAATAAAACCGCCTCCATg > 1:16254042/1‑35 (MQ=255) tATCGAGATTGCCGAGAATAAAACCGCCTCCATGc > 1:16020897/1‑35 (MQ=255) aTCGAGATTGCCGAGAATAAAACCGCCTCCATGCa > 1:4028542/1‑35 (MQ=255) aTCGAGATTGCCGAGAATAAAACCGCCTCCATGCa > 1:19266979/1‑35 (MQ=255) cGAGATTGCCGAGAATAAAACCGCCTCCATGCaaa > 1:11857445/1‑35 (MQ=255) gagaTTGCCGAGAATAAAACCGCCTCCATGCaaat > 1:15444295/1‑35 (MQ=255) gagaTTGCCGAGAATAAAACCGCCTCCATGCaaat > 1:14948983/1‑35 (MQ=255) gagaTTGCCGAGAATAAAACCGCCTCCATGCaaat > 1:16611645/1‑35 (MQ=255) agaTTGCCGAGAATAAAACCGCCTCCATGCaaata > 1:15825982/1‑35 (MQ=255) agaTTGCCGAGAATAAAACCGCCTCCATGCaaata > 1:1857870/1‑35 (MQ=255) gaTTGCCGAGAATAAAACCGCCTCCATGCaaataa > 1:14785964/1‑35 (MQ=255) gaTTGCCGAGAATAAAACCGCCTCCATGCaaataa > 1:17237858/1‑35 (MQ=255) gaTTGCCGAGAATAAAACCGCCTCCATGCaaataa > 1:10485893/1‑35 (MQ=255) aTTGCCGAGAATAAAACCGCCTCCATGCaaataaa > 1:19742406/1‑35 (MQ=255) aTTGCCGAGAATAAAACCGCCTCCATGCaaataaa > 1:6938354/1‑35 (MQ=255) aTTGCCGAGAATAAAACCGCCTCCATGCaaataaa > 1:14556347/1‑35 (MQ=255) ttGCCGAGAATAAAACCGCCTCCATGCaaataaaa > 1:7680733/1‑35 (MQ=255) ttGCCGAGAATAAAACCGCCTCCATGCaaataaaa > 1:3772235/1‑35 (MQ=255) tGCCGAGAATAAAACCGCCTCCATGCaaataaaat > 1:11133624/1‑35 (MQ=255) tGCCGACAATAAAACCGCCTCCATGCaaataaaat > 1:16230240/1‑35 (MQ=255) gCCGAGAATAAAACCGCCTCCATGCacataaaata > 1:20438226/1‑35 (MQ=255) ccaaaacaaacccCCGCCTCCATGCaaataaaata > 1:16976257‑M1/14‑35 (MQ=255) ccGAGAATAAAACCGCCTCCATGCAAATAAAATAg > 1:2650334/1‑35 (MQ=255) ccGAGAATAAAACCGCCTCCATGCAAATAAAATAg > 1:17687952/1‑35 (MQ=255) ccGAGAATAAAACCGCCTCCATGCAAATAAAATAg > 1:11219868/1‑35 (MQ=255) ccGAGAATAAAACCGCCTCCATGCAAATAAAATAg > 1:19969202/1‑35 (MQ=255) caaaaaaaacccCCGCCTCCATGCAAATAAAATAg > 1:2375831‑M1/13‑35 (MQ=255) caaaaaaccccCCGCCTCCATGCAAATAAAATAGc > 1:12690822‑M1/12‑35 (MQ=255) aaaaaacacccCCGCCTCCATGCAAATAAAATAGc > 1:4783166‑M1/12‑35 (MQ=255) aaaaaaaacccCCGCCTCCATGCAAATAAAATAGc > 1:5547638‑M1/12‑35 (MQ=255) aaaaacacccCCGCCTCCATGCAAATAAAATAGCg > 1:13712156‑M1/11‑35 (MQ=255) agaATAAAACCGCCTCCATGCAAATAAAATAGcag > 1:7392183/1‑33 (MQ=255) agaATAAAACCGCCTCCATGCAAATAAAATAGCGt > 1:19180439/1‑35 (MQ=255) gaATAAAACCGCCTCCATGCAAATAAAATAGCGTc > 1:18130547/1‑35 (MQ=255) cacacccCCGCCTCCATGCAAATAAAATAGCGTCg > 1:17353970‑M1/8‑35 (MQ=255) accacccCCGCCTCCATGCAAATAAAATAGCGTCg > 1:17626877‑M1/8‑35 (MQ=255) aacacccCCGCCTCCATGCAAATAAAATAGCGTCg > 1:10630245‑M1/8‑35 (MQ=255) aacacccCCGCCTCCATGCAAATAAAATAGCGTCg > 1:4725881‑M1/8‑35 (MQ=255) aaaacccCCGCCTCCATGCAAATAAAATAGCGTCg > 1:869692‑M1/8‑35 (MQ=255) aaaaaacCCACCTCCATGCAAATAAAATAGCGTCg < 1:19916985/32‑1 (MQ=25) aaTAAAACCGCCTCCATGCAAATAAAATAGCGTCg > 1:16848050/1‑35 (MQ=255) aaTAAAACCGCCTCCATGCAAATAAAATAGCGTCg > 1:5389121/1‑35 (MQ=255) ccccccCCGCCTCCATGCAAATAAAATAGCGTCGc > 1:12050657‑M1/7‑35 (MQ=255) acccccCCGCCTCCATGCAAATAAAATAGCGTCGc > 1:1701827‑M1/7‑35 (MQ=255) acacccCCGCCTCCATGCAAATAAAATAGCGTCGc > 1:7510359‑M1/7‑35 (MQ=255) tAAAACCGCCTCCATGCAAATAAAATAGCGTCGcc > 1:820134/1‑35 (MQ=255) cccccCCGCCTCCATGCAAATAAAATAGCGTCGcc > 1:8497307‑M1/6‑35 (MQ=255) cccccCCGCCTCCATGCAAATAAAATAGCGTCGcc > 1:2849161‑M1/6‑35 (MQ=255) cacccCCGCCTCCATGCAAATAAAATAGCGTCGcc > 1:7150790‑M1/6‑35 (MQ=255) accccCCGCCTCCATGCAAATAAAATAGCGTCGcc > 1:1296295‑M1/6‑35 (MQ=255) ccccCCGCCTCCATGCAAATAAAATAGCGTCGCCg > 1:15767842‑M1/5‑35 (MQ=255) ccccCCGCCTCAATGCAAATAAAATAGCGTCGCCg > 1:20558347‑M1/5‑35 (MQ=255) ccccCCGCCTCAATGCAAATAAAATAGCGTCGCCg > 1:18243084‑M1/5‑35 (MQ=255) ccccCCGCCTCAATGCAAATAAAATAGCGTCGCCg > 1:17411356‑M1/5‑35 (MQ=255) cccCCGCCTCCATGCAAATAAAATAGCGTCGCCgg > 1:5356382‑M1/4‑35 (MQ=255) cccCCGCCTCCATGCAAATAAAATAGCGTCGCCgg > 1:3339176‑M1/4‑35 (MQ=255) cccCCGCCTCCATGCAAATAAAATAGCGTCGCCgg > 1:8906060‑M1/4‑35 (MQ=255) cccCCGCCTCCATGCAAATAAAATAGCGTCGCCgg > 1:11420354‑M1/4‑35 (MQ=255) aaaCCGCCTCCATGCAAATAAAATAGCGTCGccag > 1:9238927/1‑33 (MQ=255) aaaCCGCCTCCATGCAAATAAAATAGCGTCGCCgg > 1:8329398/1‑35 (MQ=255) aaaCCGCCTCCATGCAAATAAAATAGCGTCGCCgg > 1:698175/1‑35 (MQ=255) aaaCCGCCTCCATGCAAATAAAATAGCGTCGCCgg > 1:7082949/1‑35 (MQ=255) aaaCCGCCTCCATGCAAATAAAATAGCGTCGCCgc > 1:7777278/1‑34 (MQ=255) ccCCGCCTCCATGCAAATAAAATAGCGTCGCCggg > 1:931771‑M1/3‑35 (MQ=255) ccCCGCCTCCATGCAAATAAAATAGCGTCGCCggg > 1:1820570‑M1/3‑35 (MQ=255) aaCCGCCTCCATGCAAATAAAATAGCGTCGCCggg > 1:362552/1‑35 (MQ=255) aaCCGCCTCCATGCAAATAAAATAGCGTCGCCggg > 1:17276761/1‑35 (MQ=255) aaCCGCCTCCATGCAAATAAAATAGCGTCGCCggg > 1:14191594/1‑35 (MQ=255) aaCCGCCTCCATGCAAATAAAATAGCGTCGCCggg > 1:10088633/1‑35 (MQ=255) cCCGCCTCCATGCAAATAAAATAGCGTCGCCGGGc > 1:12429985‑M1/2‑35 (MQ=255) aCCGCCTCCATGCAAATAAAATAGCGTCGCCGGGc > 1:1006753/1‑35 (MQ=255) CCGCCTCCATGCAAATAAAATAGCGTCGCCGGGCt < 1:5867762‑M1/35‑1 (MQ=255) CCGCCTCCATGCAAATAAAATAGCGTCGCCGGGCt < 1:17540802‑M1/35‑1 (MQ=255) CCGCCTCCATGCAAATAAAATAGCGTCGCCGGGCt < 1:13099057‑M1/35‑1 (MQ=255) | GCGATCGTGGGTATCGAGATTGCCGAGAATAAAACCGCCTCCATGCAAATAAAATAGCGTCGCCGGGCT > REL606/471726‑471794 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |