New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1822767 = | 84 (0.820) | 11 (0.140) | 3/38 | NT | 13.7% | coding (1422/1962 nt) | topB | DNA topoisomerase III |
? | REL606 | = 2900727 | 72 (0.890) | coding (86/771 nt) | yqeC | hypothetical protein |
Only 100 of 147 total aligned reads displayed.
GGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTG > REL606/1822733‑1822801 | gggTTTGCCGCTCTACCACTTCACCTTTTTcacac < 1:9915609/35‑1 (MQ=255) gggTTTGCCGCTCTACCACTTCACCTTTTTcacac > 1:19390124/1‑35 (MQ=255) gggTTTGCCGCTCTACCACTTCACCTTTTTcacac > 1:19885415/1‑35 (MQ=255) gggTTTGCCGCTCTACCACTTCACCTTTTTcacac > 1:11198378/1‑35 (MQ=255) gggTTTGCCGCTCTACCACTTCACCTTTTTcacac < 1:15836779/35‑1 (MQ=255) gctcccagccaaaaaagcaagctggttttcccccc > 1:13354295‑M1/35‑35 (MQ=255) ggTTTGCCGCTCTACCACTTCACCTTTTTcacaca > 1:281026/1‑35 (MQ=255) gTTTGCCGCTCTACCACTTCACCTTTTTCACACAg < 1:20285454/35‑1 (MQ=255) gTTTGCCGCTCTACCACTTCACCTTTTTCACACAg > 1:2083824/1‑35 (MQ=255) gTTTGCCGCTCTACCACTTCACCTTTTTCACACAg > 1:3226282/1‑35 (MQ=255) gTTTGCCGCTCTACCACTTCACCTTTTTCACACAg > 1:15431733/1‑35 (MQ=255) gTTTGCCGCTCTACCACTTCACCTTTTTCACACAg < 1:14502809/35‑1 (MQ=255) gTTTGCCGCTCTACCACTTCACCTTTTTCACACAg < 1:4049122/35‑1 (MQ=255) tttGCCGCTCTACCACTTCACCTTTTTCACACAGc < 1:6828108/35‑1 (MQ=255) tttGCCGCTCTACCACTTCACCTTTTTCACACAGc > 1:3671220/1‑35 (MQ=255) tttGCCGCTCTACCACTTCACCTTTTTCACACAGc > 1:9671918/1‑35 (MQ=255) tttGCCGCTCTACCACTTCACCTTTTTCACACAGc > 1:12698293/1‑35 (MQ=255) tttGCCGCTCTACCACTTCACCTTTTTCACACAGc > 1:6269282/1‑35 (MQ=255) tttGCCGCTCTACAACTTCACCTTTTTCACACAGc < 1:13711773/35‑1 (MQ=255) ttGCCGCTCTACCACTTCACCTTTTTCACACAGCa > 1:20259482/1‑35 (MQ=255) ttGCCGCTCTACCACTTCACCTTTTTCACACAGCa > 1:3951763/1‑35 (MQ=255) ccagccaaaaaagcaagctggttttcccccCAGCa < 1:854092‑M1/5‑1 (MQ=255) ccagccaaaaaagcaagctggttttcccccCAGCa > 1:5307588‑M1/31‑35 (MQ=255) ccagccaaaaaagcaagctggttttcccccCAGCa < 1:17503518‑M1/5‑1 (MQ=255) ccagccaaaaaagcaagctggttttcccccCAGCa < 1:20134874‑M1/5‑1 (MQ=255) tGCCGCTCTACCACTTCACCTTTTTGACACAGCaa < 1:7690861/35‑1 (MQ=255) tGCCGCTCTACCACTTCACCTTTTTCACACAGCaa > 1:1816647/1‑35 (MQ=255) tGCCGCTCTACCACTTCACCTTTTTCACACAGCaa > 1:1845662/1‑35 (MQ=255) tGCCGCTCTACCACTTCACCTTTTTCACACAGCaa > 1:15527061/1‑35 (MQ=255) tGCCGCTCTACCACTTCACCTTTTTCACACAGCaa < 1:17521939/35‑1 (MQ=255) tGCCGCTCTACCACTTCACCTTTTTCACACAGCaa < 1:7464333/35‑1 (MQ=255) gCCGCTCTACCACTTCACCTTTTTCACACAGCAAc > 1:18358976/1‑35 (MQ=255) gCCGCTCTACCACTTCACCTTTTTCACACAGCAAc > 1:18661430/1‑35 (MQ=255) cccctctCCCACTTCACCTTTTTCACACAGCAACt < 1:589856/32‑1 (MQ=25) ccGCTCTACCACTTCACCTTTTTCACACATCAACt > 1:13805745/1‑35 (MQ=255) ccGCTCTACCACTTCACCTTTTTCACACAGCAACt > 1:12847536/1‑35 (MQ=255) ccGCTCTACCACTTCACCTTTTTCACACAGCAACt > 1:1301940/1‑35 (MQ=255) cGCTCTACCACTTCACCTTTTTCACACAGCAACTc < 1:7294816/35‑1 (MQ=255) cGCTCTACCACTTCACCTTTTTCACACAGCAACTc > 1:13977686/1‑35 (MQ=255) gCTCTACCACTTCACCTTTTTCACACAGCAACTCa > 1:8535409/1‑35 (MQ=255) gCTCTACCACTTCACCTTTTTCACACAGCAACTCa > 1:15158854/1‑35 (MQ=255) gCTCTACCACTTCACCTTTTTCACACAGCAACTCa > 1:5099900/1‑35 (MQ=255) gCTCTACCACTTCACCTTTTTCACACAGCAACTCa > 1:19283471/1‑35 (MQ=255) ctctACCACTTCACCTTTTTCACACAGCAACTCAt > 1:15988812/1‑35 (MQ=255) ctctACCACTTCACCTTTTTCACACAGCAACTCAt > 1:7688181/1‑35 (MQ=255) ctctACCACTTCACCTTTTTCACACAGCAACTCAt > 1:4858983/1‑35 (MQ=255) tctACCACTTCACCTTTTTCACACAGCAACTCATc < 1:10273874/35‑1 (MQ=255) ctACCACTTCACCTTTTTCCCACAGCAACTCATCg < 1:11381037/35‑1 (MQ=255) ctACCACTTCACCTTTTTCACACAGCAACTCATCg < 1:4671742/35‑1 (MQ=255) ctACCACTTCACCTTTTTCACACAGCAACTCATCg > 1:16234773/1‑35 (MQ=255) tACCACTTCACCTTTTTCACACAGCAACTCATCGc < 1:11308954/35‑1 (MQ=255) tACCACTTCACCTTTTTCACACAGCAACTCATCGc > 1:20349490/1‑35 (MQ=255) cccACTTCCCCTTTTTCACACAGCAACTCATCGcc < 1:15236061/34‑1 (MQ=255) ncACTTCACCTTTTTCACACAGCAACTCATCGCCt > 1:19537651/2‑35 (MQ=255) ccACTTCACCTTTTTCACACAGCAACTCATCGCCt > 1:5879213/1‑35 (MQ=255) ccACTTCACCTTTTTCACACAGCAACTCATCGCCt > 1:7827131/1‑35 (MQ=255) cACTTCACCTTTTTCACACAGCAACTCATCGCCtt < 1:739965/35‑1 (MQ=255) cACTTCACCTTTTTCACACAGCAACTCATCGCCtt < 1:16302025/35‑1 (MQ=255) cACTTCACCTTTTTCACACAGCAACTCATCGCCtt > 1:2598155/1‑35 (MQ=255) aCTTCACCTTTTTCACACAGCAACTCATCGCCttt > 1:13345142/1‑35 (MQ=255) aCTTCACCTTTTTCACACAGCAACTCATCGCCttt > 1:14347333/1‑35 (MQ=255) cTTCCCCTTTTTCACACAGCAACTCATCGCCTTTc < 1:4972713/35‑1 (MQ=255) cTTCCCCTTTTCCCCCCAGCAACTCATCGCCTTTc < 1:4282732/35‑1 (MQ=19) cTTCACCTTTTTCACACAGCAACTCATCGCCttta > 1:17617024/1‑34 (MQ=255) cTTCACCTTTTTCACACAGCAACTCATCGCCTTTc > 1:15853463/1‑35 (MQ=255) cTTCACCTTTTTCACACAGCAACTCATCGCCTTTc > 1:1961271/1‑35 (MQ=255) ttCACCTTTTTCACACAGCAACTCATCGCCTTTCg > 1:10767302/1‑35 (MQ=255) tccccTTTTTCACACAGCAACTCATCGCCTTTCGc < 1:2229783/32‑1 (MQ=255) tCACCTTTTTCACACAGCAACTCATCGCCTTTCGc > 1:14473734/1‑35 (MQ=255) tCACCTTTTTCACACAGCAACTCATCGCCTTTCGc > 1:15542653/1‑35 (MQ=255) tCACCTTTTTCACACAGCAACTCATCGCCTTTCGc > 1:9173706/1‑35 (MQ=255) tCACCTTTTTCACACAGCAACTCATCGCCTTTCGc > 1:2660008/1‑35 (MQ=255) tCACCTTTTTCACACAGCAACTCATCGCCTTTCGc > 1:12752258/1‑35 (MQ=255) ccccTTTTTCACACAGCAACTCATCGCATTTCGcc < 1:3720794/33‑1 (MQ=38) cACCTTTTTCACACAGCAACTCATCGCCTTTCGcc > 1:2012521/1‑35 (MQ=255) cACCTTTTTCACACAGCAACTCATCGCCTTTCGcc > 1:11500568/1‑35 (MQ=255) cACCTTTTTCACACAGCAACTCATCGCCTTTCGcc > 1:10398370/1‑35 (MQ=255) cccTTTTTCACACAGCAACTCATCGCCTTTCGcca < 1:5173646/34‑1 (MQ=255) aCCTTTTTCACACAGCAACTCATCGCCTTTCGcca > 1:2477240/1‑35 (MQ=255) ctttttcccccCAGCAACTCATCGCCTTTCGccac > 1:16198305‑M1/12‑35 (MQ=255) cttttcccccCAGCAACTCATCGCCTTTCGccacc > 1:1851664‑M1/11‑35 (MQ=255) cttttcccccCAGCAACTCATCGCCTTTCGccacc > 1:15097909‑M1/11‑35 (MQ=255) cTTTTTCACACAGCAACTCATCGCCTTTCGccacc > 1:18741020/1‑35 (MQ=255) tttttCACACAGCAACTCATCGCCTTTCGccacca > 1:13270219/1‑35 (MQ=255) ttttcccccCAGCAACTCATCGCCTTTCGccacca > 1:9265414‑M1/10‑35 (MQ=255) ttttcccccCAGCAACTCATCGCCTTTCGccacca > 1:18405528‑M1/10‑35 (MQ=255) ttttCACACAGCAACTCATCGCCTTTCGCcaccac > 1:13151852/1‑35 (MQ=255) tttCACACAGCAACTCATCGCCTTTCGCCACcaca > 1:16121627/1‑35 (MQ=255) ttCACACAGCAACTCATCGCCTTTCGCCACCACAg > 1:5476026/1‑35 (MQ=255) tccccgCAGCAACTCATCGCCTTTCGCCACCACAg > 1:12001901‑M1/7‑35 (MQ=255) tcccccCAGCAACTCATCGCCTTTCGCCACCACAg > 1:8194129‑M1/7‑35 (MQ=255) tCACACAGCAACTCATCGCCTTTCGCCACCACAgg > 1:12634451/1‑35 (MQ=255) cccccCAGCAACTCATCGCCTTTCGACACCACAgg > 1:7024687‑M1/6‑35 (MQ=255) ccccCAGCAACTCATCGCCTTTCGCCACCACAGGc > 1:661719‑M1/5‑35 (MQ=255) acacaGCAACTCATCGCCTTTCGCCACCACAGGCa > 1:7969852/1‑35 (MQ=255) ccCAGCAACTCATCGCCTTTCGCCACCACAGGCAg > 1:827183‑M1/3‑35 (MQ=255) acaGCAACTCATCGCCTTTCGCCACCACAGGCAgg > 1:990757/1‑34 (MQ=255) acaGCAACTCATCGCCTTTCGCCACCACAGGCAGt > 1:10954332/1‑35 (MQ=255) CAGCAACTCATCGCCTTTCGCCACCACAGGcaggg < 1:5197098‑M1/35‑3 (MQ=255) CAGCAACTCATCGCCTTTCGCCACCACAGGCAGTg > 1:9602157‑M1/1‑35 (MQ=255) | GGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTG > REL606/1822733‑1822801 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |