New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1075765 | 68 (0.660) | 14 (0.170) | 4/38 | NT | 15.8% | coding (220/2547 nt) | torA | trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit |
? | REL606 | = 3523984 | 95 (1.170) | coding (128/714 nt) | livF | leucine/isoleucine/valine transporter subunit |
Only 100 of 189 total aligned reads displayed.
ATCGCCGCATAACGTACCAAGCAAGGTGGTTTTCCCCGCCCCGTTCGCGCCAATCAGCGTGACAATCTC > REL606/3523950‑3524018 | aTCGCCGCATAACGTACCAAGCAAGGTGGTTTTcc < 1:18541562/35‑1 (MQ=255) aTCGCCGCATAACGTACCAAGCAAGGTGGTTTTcc < 1:20024008/35‑1 (MQ=255) aTCGCCGCATAACGTACCAAGCAAGGTGGTTTTcc > 1:10210792/1‑35 (MQ=255) aTCGCCGCATAACGTACCAAGCAAGGTGGTTTTcc > 1:13115185/1‑35 (MQ=255) tCGCCGCATAACGTACCAAGCAAGGTGGTTTTCCc > 1:1079538‑M2/1‑34 (MQ=255) cgccgcATAACGTACCAAGCAAGGTGGTTTTCCcc < 1:19298804‑M2/35‑3 (MQ=255) cgccgcATAACGTACCAAGCAAGGTGGTTTTCCcc > 1:7996605‑M2/1‑33 (MQ=255) gccgcATAACGTACCAAGCAAGGTGGGTTTCCccg < 1:7495771‑M2/35‑4 (MQ=255) cgcATAACGTACCAAGCAAGGTGGTTTTCCccgcc < 1:15388601‑M2/35‑6 (MQ=255) cgcATAACGTACCAAGCAAGGTGGTTTTCCccgcc < 1:4974025‑M2/35‑6 (MQ=255) cgcATAACGTACCAAGCAAGGTGGTTTTCCccgcc < 1:6543526‑M2/35‑6 (MQ=255) cgcATAACGTACCAAGCAAGGTGGTTTTCCccgcc > 1:9651681‑M2/1‑30 (MQ=255) gcATAACGTACCAAGCAAGGTGGTTTTccccgccc > 1:10354078/1‑35 (MQ=255) gcATAACGTACCAAGCAAGGTGGTTTTccccgccc < 1:6264114/35‑1 (MQ=255) gcATAACGTACCAAGCAAGGTGGTTTTccccgccc < 1:13032765/35‑1 (MQ=255) gcATAACGTACCAAGCAAGGTGGTTTTccccgccc > 1:16823875/1‑35 (MQ=255) gcATAACGTACCAAGCAAGGTGGTTTTccccgccc < 1:10113105/35‑1 (MQ=255) gcATAACGTACCAAGCAAGGTGGTTTTccccgccc < 1:7958474/35‑1 (MQ=255) gcATAACGTACCAAGCAAGGTGGTTTTccccgccc < 1:6761729/35‑1 (MQ=255) taTAACGTACCAAGCAAGGTGGTTTTccccgcccc < 1:240169/34‑1 (MQ=255) cATAACGTACCAAGCAAGGTGGTTTTccccgcccc < 1:12460861/35‑1 (MQ=255) cATAACGTACCAAGCAAGGTGGTTTTccccgcccc < 1:14854291/35‑1 (MQ=255) tAACGTACCAAGCAAGGTGGTTTTCCCCGCCCCGt < 1:11888500/35‑1 (MQ=255) tAACGTACCAAGCAAGGTGGTTTTCCCCGCCCCGt < 1:7256058/35‑1 (MQ=255) tAACGTACCAAGCAAGGTGGTTTTCCCCGCCCCGt > 1:10005208/1‑35 (MQ=255) aaagTACCAAGCAAGGTGGTTTTCCCCGCCCCGtt < 1:2165948/32‑1 (MQ=255) aaCGTACCAAGCAAGGTGGTTTTCCCCGCCCCGtt > 1:13530688/1‑35 (MQ=255) aaCGTACCAAGCAAGGTGGTTTTCCCCGCCCCGtt < 1:13902943/35‑1 (MQ=255) aaCGTACCAAGCAAGGTGGTTTTCCCCGCCCCGtt < 1:18293553/35‑1 (MQ=255) aaCGTACCAAGCAAGGTGGGTTTCCCCGCCCCGtt > 1:15589236/1‑35 (MQ=255) cGTACCAAGCAAGGTGGTTTTCCCCGCCCCGTTcg < 1:8721011/35‑1 (MQ=255) cGTACCAAGCAAGGTGGTTTTCCCCGCCCCGTTcg < 1:14799550/35‑1 (MQ=255) cGTACCAAGCAAGGTGGTTTTCCCCGCCCCGTTcg > 1:7641101/1‑35 (MQ=255) cGTACCAAGCAAGGTGGGTTTCCCCGCCCCGttag > 1:15287620/1‑33 (MQ=37) gTACCAAGCAAGGTGGTTTTCCCCGCCCCGTTcgc < 1:17885046/35‑1 (MQ=255) gTACCAAGCAAGGTGGTTTTCCCCGCCCCGTTcgc < 1:13368239/35‑1 (MQ=255) gTACCAAGCAAGGTGGTTTTCCCCGCCCCGTTcgc > 1:11651066/1‑35 (MQ=255) gTACCAAGCAAGGTGGTTTTCCCCGCCCCGTTcgc > 1:12638818/1‑35 (MQ=255) gTACCAAGCAAGGTGGTTTTCCCCGCCCAGATcgg > 1:2026898/1‑34 (MQ=25) tACCAAGCAAGGTGGTTTTCCCCGCCCCGTTcgcg > 1:5845489/1‑35 (MQ=255) tACCAAGCAAGGTGGTTTTCCCCGCCCCGTTcgcg > 1:3990559/1‑35 (MQ=255) tACCAAGCAAGGTGGTTTTCCCCGCCCCGTTcgcg > 1:11464085/1‑35 (MQ=255) tACAAAGCAAGGTGGTTTTCCCCGCCCCGTTcgcg < 1:6284152/35‑1 (MQ=255) aCCAAGCAAGGTGGTTTTCCCCGCCCCGTTCgcgc < 1:12517575/35‑1 (MQ=255) aCCAAGCAAGGTGGTTTTCCCCGCCCCGTTCgcgc > 1:14654698/1‑35 (MQ=255) ccAAGCAAGGTGGTTTTCCCCGCCCCGTTCGCGcc > 1:16622681/1‑35 (MQ=255) ccAAGCAAGGTGGTTTTCCCCGCCCCGTTCGCGcc > 1:14366812/1‑35 (MQ=255) ccAAGCAAGGTGGTTTTCCCCGCCCCGTTCGCGcc > 1:2655466/1‑35 (MQ=255) ccAAGCAAGGTGGGTTTCCCCGCCCCGTTCGCGcc > 1:19755287/1‑35 (MQ=255) aagcaagGTGGTTTTCCCCGCCCCGTTCGCTCCaa > 1:2040588/1‑35 (MQ=255) aagcaagGTGGTTTTCCCCGCCCCGTTCGCGCTaa > 1:8071154/1‑35 (MQ=255) aagcaagGTGGTTTTCCCCGCCCCGTTCGCGCCaa > 1:10004804/1‑35 (MQ=255) aagcaagGTGGTTTTCCCCGCCCCGTTCGCGCCaa > 1:10629454/1‑35 (MQ=255) agcaagGTGGTTTTCCCCGCCCCGTTCGCGCCAAt > 1:4641940/1‑35 (MQ=255) agcaagGTGGTTTTCCCCGCCCCGTTCGCGCCAAt < 1:8497394/35‑1 (MQ=255) agcaagGTGGTTTTCCCCGCACCGTTCGCGCCAAt < 1:3179962/35‑1 (MQ=255) agcaagGTGGCTTTCCCCGCCCCGTTCGCGCCAAt > 1:17631380/1‑35 (MQ=255) gcaagGTGGTTTTCCCCGCCCCGTTCGCGCCAATc < 1:4615269/35‑1 (MQ=255) gcaagGTGGTTTTCCCCGCCCCGTTCGCGCCAATc < 1:4255492/35‑1 (MQ=255) caagGTGGTTTTCCCCGCCCCGTTCGCGCCAATCa < 1:1745605/35‑1 (MQ=255) caagGTGGTTTTCCCCGCCCCGTTCGCGCCAATCa < 1:16302411/35‑1 (MQ=255) aagGTGGTTTTCCCCGCCCCGTTCGCGCCAATCAg > 1:4405096/1‑35 (MQ=255) aagGTGGTTTTCCCCGCCCCGTTCGCGCCAATCAg > 1:10327134/1‑35 (MQ=255) agGTGGTTTTCCCAGCCCCGTTCGCGCCAATCAGc < 1:10832704/35‑1 (MQ=255) ggtggtTTTCCCCGCCCCGTTCGCGCCAATCAGCg > 1:2916080/1‑35 (MQ=255) ggtggtTTTCCCCGCCCCGTTCGCGCCAATCAGCg < 1:3772613/35‑1 (MQ=255) gttgtTTTCCCCGCCCCGTTCGCTCCAATCAGCGt > 1:15263387/4‑35 (MQ=37) gtggtTTTCCCCGCCCCGTTCGCGCCAATCAGCGt > 1:14351399/1‑35 (MQ=255) gtggtTTTCCCCGCCCCGTTCGCGCCAATCAGCGt > 1:19902258/1‑35 (MQ=255) gtggtTTTCCCCGCCCCGTTCGCGCCAATCAGCGn < 1:3578267/35‑1 (MQ=255) gtggtTATCCCCGCCCCGTTCGCGCCAATCAGCGt < 1:16412417/35‑1 (MQ=255) acggtttTCCccgccacaaagcgaccatccttcac > 1:5964022‑M2/3‑10 (MQ=255) tggtTTTCCccgccacaaagcgaccatccttcacc > 1:4285141‑M2/1‑9 (MQ=255) tggtTTTCCCCGCCCCGTTCGCGCCAATCAGCTTg > 1:14579286/1‑35 (MQ=255) tggtTTTCCCCGCCCCGTTCGCGCCAATCAGCGTg > 1:5480930/1‑35 (MQ=255) tggtTTTCCCCGCCCCGTTCGCGCCAATCAGCGTg > 1:10548264/1‑35 (MQ=255) tggtTTTCCCCGCCCCGTTCGCGCCAATCAGCGTg < 1:8220564/35‑1 (MQ=255) ccgtttTCCccgccacaaagcgaccatccttcacc > 1:5167232‑M2/3‑9 (MQ=255) ggtTTTCGccgccacaaagcgaccatccttcaccg > 1:14402930‑M2/1‑8 (MQ=255) ggtTTTCCCCGCCCCGTTCGCGCCAATCAGCGTGa < 1:5671849/35‑1 (MQ=255) ggtTTTCCCCGCCCCGTTCGCGCCAATCAGCGTGa < 1:11705758/35‑1 (MQ=255) ctgtttccccgccacaaagcgaccatccttcaccg > 1:7817771‑M2/4‑8 (MQ=255) cgttTTCCccgccacaaagcgaccatccttcaccg > 1:15327233‑M2/2‑8 (MQ=255) cgttTTCCccgccacaaagcgaccatccttcaccg > 1:8781299‑M2/2‑8 (MQ=255) gtTTTCCCCGCCCCGTTCGCGCCAATCAGCGTGAc > 1:15873069/1‑35 (MQ=255) ggtttccccgccacaaagcgaccatccttcaccgt > 1:13771578‑M2/3‑7 (MQ=255) ttttCCccgccacaaagcgaccatccttcaccgtc > 1:5183576‑M2/1‑6 (MQ=255) ttttCCccgccacaaagcgaccatccttcaccgtc > 1:11190354‑M2/1‑6 (MQ=255) ttttCCCCGCCCCGTTCGCGCCAATCAGCGTGACa > 1:11660142/1‑35 (MQ=255) ttttCCCCGCCCCGTTCGCGCCAATCAGCGTGACa > 1:19421287/1‑35 (MQ=255) tttcCCccgccacaaagcgaccatccttcaccgtc > 1:904461‑M2/1‑6 (MQ=255) tttCCCCGCCCCGTTCGCGCCAATCAGCGTGACaa < 1:9892964/35‑1 (MQ=255) tttCCCCGCCCCGTTCGCGCCAATCAGCGTGACaa < 1:12385997/35‑1 (MQ=255) ttCCCCGCCCCGTTCGCGCCAATCAGCGTGACAAt < 1:17476973/35‑1 (MQ=255) tCCCCGCCCCGTTCGCGCCAATCAGCGTGACAAtc < 1:10437776/35‑1 (MQ=255) tCCCCGCCCCGTTCGCGCCAATCAGCGTGACAAtc < 1:16808477/35‑1 (MQ=255) ccccgccccgTTCGCGCCAATCAGCGTGACAAtct < 1:2888775/35‑1 (MQ=255) ccccgccccgTTCGCGCCAATCAGCGTGACAAtct < 1:1976417/35‑1 (MQ=255) cccgccccgTTCGCGCCAATCAGCGTGACAAtctc < 1:18986594/35‑1 (MQ=255) cccgccacaaagcgaccatccttcaccgtcgcgcg > 1:800654‑M2/1‑1 (MQ=255) | ATCGCCGCATAACGTACCAAGCAAGGTGGTTTTCCCCGCCCCGTTCGCGCCAATCAGCGTGACAATCTC > REL606/3523950‑3524018 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |