Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 643,362 | IS150 (+) +3 bp | 43.3% | coding (598‑600/954 nt) | ybeF ← | predicted DNA‑binding transcriptional regulator |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 643362 = | 62 (0.720) | 44 (0.450) | 24/46 | NT | 38.2% | coding (600/954 nt) | ybeF | predicted DNA‑binding transcriptional regulator |
? | REL606 | = 666130 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 643364 | 61 (0.710) | 50 (0.510) | 29/46 | NT | 41.6% | coding (598/954 nt) | ybeF | predicted DNA‑binding transcriptional regulator |
? | REL606 | 664688 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region |
GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/643395‑643362 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTA < REL606/666130‑666102 GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT > 1:20549111/1‑35 GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT < 1:17138412/35‑1 GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT < 1:2124092/35‑1 GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT < 1:20338635/35‑1 GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT > 1:11715149/1‑35 GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT > 1:14579988/1‑35 GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT < 1:13565407/35‑1 GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCT > 1:1953474/1‑35 GTGTTAATTTGCCGCGAGGGAAATCCACTACTCTG > 1:12733552/1‑35 TGTTAATTTGCCGCGAGGGAAATCCACTACTCTGT < 1:1751497/35‑1 TGTTAATTTGCCGCGAGGGAAATCCACTACTCTGT > 1:17851754/1‑35 TGTTAATTGGCCGCGAGGGAAATCCACTACTCTGT < 1:19757912/35‑1 GTTAATTTGCCGCGAGGGAAATCCACTACTCTGTA > 1:15258080/1‑35 GTTAATTTGCCGCGAGGGAAATCCACTACTCTGTA < 1:8573594/35‑1 TAATTTGCCGCGAGGGAAATCCACTACTCTGTACT < 1:16798967/35‑1 TAATTTGCCGCGAGGGAAATCCACTACTCTGTACT < 1:168767/35‑1 AATTTGCCGCGAGGGAAATCCACTACTCTGTACTG < 1:16227043/35‑1 AATTTGCCGCGAGGGAAATCAACTACTCTGTACTG < 1:1038461/35‑1 ATTTGCCGCGAGGGAAATCCACTACTCTGTACTGA < 1:12938122/35‑1 ATTTGCCGCGAGGGAAATCCACTACTCTGTACTGA < 1:562410/35‑1 ATTTGCCGCGAGGGAAATCCACTACTCTGTACTGA > 1:19749021/1‑35 TTGCCGCGAGGGAAATCCACTACTCTGTACTGACC < 1:19706888/35‑1 GCCGCGAGGGAAATCCACTACTCTGTACTGACCCC < 1:4798785/35‑1 GCCGCGAGGGAAATCCACTACTCTGTACTGACCCC > 1:12427240/1‑35 GCCGCGAGGGAAATCCACTACTCTGTACTGACCCC > 1:19832408/1‑35 GCCGCGAGGGAAATCCACTACTCTGTACTGACCCC > 1:16137706/1‑35 CCGCGAGGGAAATCCACTACTCTGTACTGACCCCA < 1:19132983/35‑1 CCGCGAGGGAAATCCACTACTCTGTACTGACCCCA < 1:10455754/35‑1 CGCGAGGGAAATCCACTACTCTGTACTGACCCCAA > 1:15620817/1‑35 CGCGAGGGAAATCCACTACTCTGTACTGACCCCAA > 1:3934399/1‑35 GCGAGGGAAATCCACTACTCTGTACTGACCCCAAA < 1:2564026/35‑1 GCGAGGGAAATCCACTACTCTGTACTGACCCCAAA > 1:2773963/1‑35 GCGAGGGAAATCCACTACTCTGTACTGACCCCAAA > 1:13398308/1‑35 GCGAGGGAAATCCACTACTCTGTACTGACCCCAAA > 1:10831412/1‑35 GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA > 1:2779134/1‑35 GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA > 1:3750137/1‑35 GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA > 1:9993557/1‑35 GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA > 1:11712572/1‑35 GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA > 1:17148300/1‑35 GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA > 1:16257816/1‑35 GAGGGAAATCCACTACTCTGTACTGACCCCAAAAA < 1:13882523/35‑1 AGGGAAATCCACTACTCTGTACTGACCCCAAAAAG > 1:17311185/1‑35 AGGGAAATCCACTACTCTGTACTGACCCCAAAAAG < 1:16872030/35‑1 AGGGAAATCCACTACTCTGTACTGACCCCAAAAAG < 1:4857888/35‑1 GGGAAATCCACTACTCTGTACTGACCCCAAAAAGT < 1:9219040/35‑1 GGGAAATCCACTACTCTGTACTGACCCCAAAAAGT < 1:12659091/35‑1 GGAAATCCACTACTCTGTACTGACCCCAAAAAGTT > 1:7205599/1‑35 GAAATCCACTACTCTGTACTGACCCCAAAAAGTTG < 1:1006387/35‑1 AAATCCACTACTCTGTACTGACCCCAAAAAGTTGG > 1:26730/1‑35 AATCCACTACTCTGTACTGACCCCAAAAAGTTGGA < 1:15452338/35‑1 AATCCACTACTCTGTACTGACCCCAAAAAGTTGGA < 1:13095015/35‑1 AATCCACTACTCTGTACTGACCCCAAAAAGTTGGA > 1:1182254/1‑35 TCCACTACTCTGTACTGACCCCAAAAAGTTGGACA < 1:18296137/35‑1 CACTACTCTGTACTGACCCCAAAAAGTTGGACAGT < 1:15841366/35‑1 ACTACTCTGTACTGACCCCAAAAAGTTGGACAGTT > 1:20321437/1‑35 ACTACTCTGTACTGACCCCAAAAAGTTGGACAGTT > 1:887485/1‑35 CTACTCTGTACTGACCCCAAAAAGTTGGAGAGTTA < 1:5495193/35‑1 CTACTCTGTACTGACCCCAAAAAGTTGGACAGTTA < 1:2751877/35‑1 CTACTCTGTACTGACCCCAAAAAGTTGGACAGTTA < 1:19101232/35‑1 CTACTCCGTACTGACCCCAAAAAGTTGGACAGTTA < 1:7893964/35‑1 GGTGTTAATTTGCCGCGAGGGAAATCCACTACTCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/643395‑643362 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTA < REL606/666130‑666102 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |