New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 220122361 (0.590)7 (0.090) 3/36 NT 9.6% coding (269/1050 nt) yeiH conserved inner membrane protein
?REL606 = 3512381 86 (1.120)intergenic (‑123/‑210) yhhX/yhhY predicted oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/predicted acetyltransferase

Only 100 of 144 total aligned reads displayed.

ATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAA  >  REL606/3512354‑3512415
                           |                                  
aTAAATTGAGAACGAAAGATCAAAAAAAAAGCCAg                             >  1:7565203/1‑35 (MQ=255)
aTAAATTGAGAACGAAAGATCAAAAAAAAAGCCAg                             <  1:10397938/35‑1 (MQ=255)
aTAAATTGAGAACGAAAGATCAAAAAAAAAGCCAg                             <  1:11375/35‑1 (MQ=255)
aTAAATTGAGAACGAAAGATCAAAAAAAAAGCCAg                             <  1:15188876/35‑1 (MQ=255)
 tAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGc                            >  1:17114931/1‑35 (MQ=255)
  aaaTTGAGAACGAAAGATCAAAAAAAAAGCCAGCa                           >  1:17596989/1‑35 (MQ=255)
    aTTGAGAACGAAAGATCAAAAAAAAAGCCAGCAcc                         >  1:17245354/1‑35 (MQ=255)
     ttGAGAACGAAAGATCAAAAAAAAAGCCAGCAccc                        >  1:19912217/1‑35 (MQ=255)
     ttGAGAACGAAAGATCAAAAAAAAAGCCAGCAccc                        >  1:9285083/1‑35 (MQ=255)
     ttGAGAACGAAAGATCAAAAAAAAAGCCAGCAccc                        <  1:6052471/35‑1 (MQ=255)
     ttGAGAACGAAAGATCAAAAAAAAAGCCAGCAccc                        <  1:17648895/35‑1 (MQ=255)
       gagaACGAAAGATCAAAAAAAAAGCCAGCACCCgg                      >  1:15325177/1‑35 (MQ=255)
       gagaACGAAAGATCAAAAAAAAAGCCAGCACCCgg                      >  1:6033769/1‑35 (MQ=255)
       gagaACGAAAGATCAAAAAAAAAGCCAGCACCCgg                      <  1:7783551/35‑1 (MQ=255)
       gagaACGAAAGATCAAAAAAAAAGCCAGCACCCgg                      >  1:13509662/1‑35 (MQ=255)
        agaACGAAAGATCAAAAAAAAAGCCAGCACCCggc                     >  1:16040903/1‑35 (MQ=255)
        agaACGAAAGATCAAAAAAAAAGCCAGCACCCggc                     >  1:16539279/1‑35 (MQ=255)
        agaACGAAAAATCAAAAAAAAAGCCAGCACCCggc                     <  1:19004285/35‑1 (MQ=255)
         gaACGAAAGATCAAAAAAAAAGCCAGCACCCggct                    <  1:10602922/35‑1 (MQ=255)
         gaACGAAAGATCAAAAAAAAAGCCAGCACCCggct                    <  1:19537574/35‑1 (MQ=255)
          aaCGAAAGATCAAAAAAAAAGCCAGCACCCggctg                   >  1:17156193/1‑35 (MQ=255)
          aaCGAAAGATCAAAAAAAAAGCCAGCACCCggctg                   >  1:4543226/1‑35 (MQ=255)
          aaCGAAAGATCAAAAAAAAAGCCAGCACCCggctg                   <  1:8543754/35‑1 (MQ=255)
          aaCGAAAGATCAAAAAAAAAGCCAGCACCCggctg                   >  1:11696083/1‑35 (MQ=255)
          aaCGAAAGATCAAAAAAAAAGCCAGCACCCggctg                   <  1:3696330/35‑1 (MQ=255)
          aaCGAAAGATCAAAAAAAAAGCCAGCACCCggctg                   <  1:1042896/35‑1 (MQ=255)
           acaaaaGAGCAAAAAAAAAGCCAGCACCCggctgg                  <  1:12974722/32‑1 (MQ=37)
           aCGAAAGATCAAAAAAAAAGCCAGCACCCggctgg                  >  1:18341293/1‑35 (MQ=255)
           aCGAAAGATCAAAAAAAAAGCCAGCACCCggctgg                  <  1:7180916/35‑1 (MQ=255)
           aCGAAAGATCAAAAAAAAAGCCAGCACCCggctgg                  >  1:3641319/1‑35 (MQ=255)
           aCGAAAGATCAAAAAAAAAGCCAGCACCCggctgg                  >  1:10141655/1‑35 (MQ=255)
           aCGAAAGATCAAAAAAAAAGCCAGCACCCggctgc                  >  1:19377870/1‑34 (MQ=255)
           aCGAAAGATCAAAAAAAAGCCAGCACCCggctggc                 >  1:2465276/1‑35 (MQ=37)
            cGAAAGATCAAAAAAAAAGCCAGCACCCggctggc                 >  1:6240813/1‑35 (MQ=255)
            cGAAAGATCAAAAAAAAAGCCAGCACCCggctggc                 >  1:16740419/1‑35 (MQ=255)
            cGAAAGATCAAAAAAAAAGCCAGCACCCggctggc                 >  1:10795384/1‑35 (MQ=255)
            cGAAAGATCAAAAAAAAAGCCAGCACCCggctggc                 >  1:8646906/1‑35 (MQ=255)
            cGAAAGATCAAAAAAAAAGCCAGCACCCggctggc                 >  1:4496415/1‑35 (MQ=255)
             gAAAGATCAAAAAAAAAGCCAGCACCCggctggct                >  1:6231493/1‑35 (MQ=255)
             gAAAGATCAAAAAAAAAGCCAGCACCCggctggct                >  1:9072710/1‑35 (MQ=255)
             gAAAGATCAAAAAAAAAGCCAGCACCCggctggct                >  1:5141154/1‑35 (MQ=255)
              aaaGATCAAAAAAAAAGCCAGCACCCGGCTGGCTa               >  1:7950189/1‑35 (MQ=255)
               aaGATCAAAAAAAAAGCCAGCACCCggctggcaag              >  1:11899648/1‑32 (MQ=255)
               aaGATCAAAAAAAAAGCCAGCACCCGGCTGGCTaa              <  1:7679377/35‑1 (MQ=255)
                aGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAg             <  1:13602431/35‑1 (MQ=255)
                aGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAg             <  1:7805209/35‑1 (MQ=255)
                aGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAg             >  1:14123543/1‑35 (MQ=255)
                aGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAg             <  1:12516241/35‑1 (MQ=255)
                 gaacAAAAAAAAAGCCAGCACCCGGCTGGCTAAGt            <  1:4873763/32‑1 (MQ=255)
                 gATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAgc            >  1:18532008/1‑34 (MQ=255)
                 gATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGt            <  1:8602328/35‑1 (MQ=255)
                 gATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGt            >  1:149099/1‑35 (MQ=255)
                 gATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGt            <  1:4079588/35‑1 (MQ=255)
                 gATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGt            >  1:7552749/1‑35 (MQ=255)
                 gATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGt            <  1:16910148/35‑1 (MQ=255)
                 gATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGt            <  1:10245799/35‑1 (MQ=255)
                  aTCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTa           <  1:971991/35‑1 (MQ=255)
                   tCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTaa          <  1:6651179/35‑1 (MQ=255)
                   tCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTaa          >  1:17421731/1‑35 (MQ=255)
                    cAAAAAAAaagccataaagaatgatacccagacgt         >  1:496730‑M2/1‑8 (MQ=255)
                     aaaacaaaagccataaagaatgatacccagacgta        >  1:16423517‑M2/1‑7 (MQ=255)
                     aaaaagaaagccataaagaatgatacccagacgta        >  1:8114827‑M2/1‑7 (MQ=255)
                     aaaaaaaaagccataaagaatgatacccagacgta        >  1:8972924‑M2/1‑7 (MQ=255)
                     aaaaaaaaaGCCAGCACCCGGCTGGCTAAGTAATa        >  1:10463403/1‑35 (MQ=255)
                     aaaaaaaaaGCCAGCACCCGGCTGGCTAAGTAATa        <  1:15008667/35‑1 (MQ=255)
                      aaaaaaaagccataaagaatgatacccagacgtaa       >  1:133325‑M2/1‑6 (MQ=255)
                      aaaaaaaaGCCAGCACCCGGCTGGCTAAGTAATAc       >  1:9624054/1‑35 (MQ=255)
                      aaaaaaaaGCCAGCACCCGGCTGGCTAAGTAATAc       <  1:10908870/35‑1 (MQ=255)
                      aaaaaaaaGCCAGCACCCGGCTGGCTAAGTAATAc       <  1:14977768/35‑1 (MQ=255)
                      aaaaaaaaGCCAGCACCCGGCTGGCTAAGTAATAc       >  1:5840626/1‑35 (MQ=255)
                       gaagaaagccataaagaatgatacccagacgtaat      >  1:2462102‑M2/2‑5 (MQ=255)
                       aaaaaaagccataaagaatgatacccagacgtaat      >  1:14256175‑M2/1‑5 (MQ=255)
                        gaaaaagccataaagaatgatacccagacgtaata     >  1:1320746‑M2/2‑4 (MQ=255)
                        acgaaagccataaagaatgatacccagacgtaata     >  1:14452371‑M2/4‑4 (MQ=255)
                        aaaaaagccataaagaatgatacccagacgtaata     >  1:8055474‑M2/1‑4 (MQ=255)
                        aaaaaaGCCAGCACCCGGCTGGCTAAGTAATACTg     >  1:13304695/1‑35 (MQ=255)
                        aaaaaaGCCAGCACCCGGCTGGCTAAGTAATACTg     <  1:16546701/35‑1 (MQ=255)
                        aaaaaaGCCAGCACCCGGCTGGCTAAGTAATACTg     <  1:7409516/35‑1 (MQ=255)
                        aaaaaaGCCAGCACACGGCTGGCTAAGTAATACTg     <  1:17532382/35‑1 (MQ=255)
                         agaaagccataaagaatgatacccagacgtaataa    >  1:3040352‑M2/3‑3 (MQ=255)
                         agaaagccataaagaatgatacccagacgtaataa    >  1:9545667‑M2/3‑3 (MQ=255)
                         aaaaagccataaagaatgatacccagacgtaataa    >  1:19541059‑M2/1‑3 (MQ=255)
                         aaaaaGCCAGCGCCCGGCTGGCTAAGTAATACTgg    <  1:16166918/35‑1 (MQ=255)
                         aaaaaGCCAGCACCCGGCTGGCTAAGTAATACTgg    <  1:12866709/35‑1 (MQ=255)
                         aaaaaGCCAGCACCCGGCTGGCTAAGTAATACTgg    >  1:19890250/1‑35 (MQ=255)
                         aaaaaGCCAGCACCCGGCTGGCTAAGTAATACTgg    <  1:7813281/35‑1 (MQ=255)
                          gaaagccataaagaatgatacccagacgtaataaa   >  1:14549885‑M2/2‑2 (MQ=255)
                          aaaagccataaagaatgatgcccagacgtaataaa   >  1:20303753‑M2/1‑2 (MQ=255)
                          aaaagccataaagaatgatacccagacgtaataaa   >  1:537652‑M2/1‑2 (MQ=255)
                          aaaaGCCAGCACCCGGCTGGCTAAGTAATACTGGa   <  1:202826/35‑1 (MQ=255)
                          aaaaGCCAGCACCCGGCTGGCTAAGTAATACTGGa   >  1:18790987/1‑35 (MQ=255)
                          aaaaGCCAGCACCCGGCTGGCTAAGTAATACTGGa   >  1:10085472/1‑35 (MQ=255)
                           aaagccataaagaatgatacccagacgtaataaat  >  1:7488068‑M2/1‑1 (MQ=255)
                           aaagccataaagaatgatacccagacgtaataaat  >  1:3016742‑M2/1‑1 (MQ=255)
                           aaaGCCAGCACCCGGCTGGCTAAGTAATACTGGaa  <  1:2511321/35‑1 (MQ=255)
                           aaaGCCAGCACCCGGCTGGCTAAGTAATACTGGaa  >  1:12207593/1‑35 (MQ=255)
                           aaaGCCAGCACCCGGCTGGCTAAGTAATACTGGaa  >  1:17677269/1‑35 (MQ=255)
                           aaaGCCAGCACCCGGCTGGCTAAGTAATACTGGaa  >  1:4078874/1‑35 (MQ=255)
                           aaaGCCAGCACCCGGCTGGCTAACTAATACTGGaa  >  1:17176472/1‑35 (MQ=255)
                           aaaGCCAGCACCAGGCTGGCTAAGTAATACTGGaa  <  1:7195539/35‑1 (MQ=255)
                           |                                  
ATAAATTGAGAACGAAAGATCAAAAAAAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAA  >  REL606/3512354‑3512415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.