New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 489053 = | 105 (1.020) | 9 (0.100) | 5/42 | NT | 12.3% | coding (303/780 nt) | ybbM | predicted inner membrane protein |
? | REL606 | 3821518 = | 37 (0.410) | coding (910/1323 nt) | glvG | predicted 6‑phospho‑beta‑glucosidase |
TGAGAGAATCAGCACCGCCAGGGTAATTCCCGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/489089‑489053 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgCCGTAATGGCGCGGCAAGCATCGAAAACCTGTTT > REL606/3821518‑3821551 TGAGAGAATCAGCACCGCCAGGGTAATTCCTGCCC > 1:8921120/1‑35 TGAGAGAATCAGCACCGCCAGGGTAATTCCCGCCC > 1:9526899/1‑35 TGAGAGAATCAGCACCGCCAGGGTAATTCCCGCCC > 1:406803/1‑35 TGAGAGAATCAGCACCGCCAGGGTAATTCCCGCCC > 1:1582169/1‑35 GAGAGAATCAGCACCGCCAGGGTAATTCCCGCCCC > 1:17464484/1‑35 GAGAGAATCAGCACCGCCAGGGTAATTCCCGCCCC > 1:17125663/1‑35 GAGAGAATCAGCACCGCCAGGGTAATTCCCGCCCC > 1:7544913/1‑35 AGAGAATCAGCACCGCCAGGGTAATTCCCGCCCCG > 1:2054573/1‑35 AGAGAATCAGCACCGCCAGGGTAATTCCCGCCCCG > 1:2944131/1‑35 AGAGAATCAGCACCGCCAGGGTAATTCCCGCCCCG > 1:12441201/1‑35 AGAGAATCAGCACCGCCAGGGTAATTCCCGCCCCG > 1:12727162/1‑35 AGAGAATCAGCACCGCCAGGGTAATTCCCGCCCCG > 1:3521790/1‑35 TAATTCCCCCCCCGCCGTAATGGCGCGGCAAGCAT < 1:3095416/35‑1 gATTCCCCCCCCGCCGTAATGGCGCGGCAAGCATC < 1:13237232/34‑1 AATTCCCCCCCCGCCGTAATGGCGCGGCAAGCATC < 1:20547457/35‑1 AATTCCCCCCCCGCCGTAATGGCGCGGCAAGCATC < 1:13248822/35‑1 AATTCCCCCCCCGCCGTAATGGCGCGGCAAGCATC < 1:12169796/35‑1 ATTCCCCCCCCGCCGTAATGGCGCGGCAAGCATCG < 1:1455997/35‑1 TCCCCCCCCGCCGTAATGGCGCGGCAAGCATCGAA < 1:7494670/35‑1 TCCCCCCCCGCCGTAATGGCGCGGCAAGCATCGAA < 1:7860572/35‑1 CCCCCCCCGCCGTAATGGCGCGGCAAGCATCGAAA < 1:10013434/35‑1 cccCCCCGCCGTAATGGCGCGGCAAGCATCGAAAA < 1:20534220/32‑1 ccCCCCGCCGTAATGGCGCGGCAAGCATCGAAAAC < 1:10213543/33‑1 CCCCGCGGTAATGGCGCGGCAAGCATCGAAAACCT < 1:31212/35‑1 CCCCGCCGTAATGGCGCGGCAAGCATCGAAAACCT < 1:16937886/35‑1 CCCGCCGTAATGGCGCGGCAAGCATCGAAAACCTG < 1:13874827/35‑1 CCCGCCGTAATGGCGCGGCAAGCATCGAAAACCTG < 1:13773897/35‑1 CCGCCGTAATGGCGCGGCAAGCATCGAAAACCTGT < 1:973767/35‑1 CCGCCGTAATGGCGCGGCAAGCATCGAAAACCTGT > 1:19955703/1‑35 CCGCCGTAATGGCGCGGCAAGCATCGAAAACCTGT < 1:16862658/35‑1 CCGCCGTAATGGCGCGGCAAGCATCGAAAACCTGT < 1:13990610/35‑1 CCGCCGTAATGGCGCGGCAAGCATCGAAAACCTGT < 1:11829027/35‑1 CCGCCGTAATGGCGCGGCAAGCATCGAAAACCTGT < 1:10315180/35‑1 CCGCCGTAATGGCGCGGCAAGCATCGAAAAACTGT < 1:17421930/35‑1 CCGCCATAATGGCGCGGCAAGCATCGAAAACCTGT < 1:15458846/35‑1 CGCCGTAATGGCGCGGGAAGCATCGAAAACCTGTT < 1:874617/35‑1 CGCCGTAATGGCGCGGCAAGCATCGAAAACCTGTT < 1:3615632/35‑1 CGCCGTAATGGCGCGGCAAGCATCGAAAACCTGTT > 1:4189194/1‑35 CGCCGTAATGGCGCGGCAAGCATCGAAAACCTGTT > 1:4280988/1‑35 CGCCGTAATGGCGCGGCAAGCATCGAAAACCTGTT < 1:10611718/35‑1 GCCTTAATGGCGCGGCAAGCATCGAAAACCTGTTT > 1:17753476/1‑35 GCCGTAATGGCGCGGCAAGCATCGAAAACCTGTTT < 1:19344116/35‑1 GCCGTAATGGCGCGGCAAGCATCGAAAACCTGTTT > 1:18341404/1‑35 TGAGAGAATCAGCACCGCCAGGGTAATTCCCGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/489089‑489053 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgCCGTAATGGCGCGGCAAGCATCGAAAACCTGTTT > REL606/3821518‑3821551 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |