New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2966042 = | 52 (0.510) | 5 (0.060) | 3/36 | NT | 9.1% | coding (1345/1992 nt) | tktA | transketolase 1, thiamin‑binding |
? | REL606 | 3780481 = | 61 (0.790) | coding (513/1359 nt) | ECB_03520 | conserved hypothetical protein |
Only 100 of 125 total aligned reads displayed.
GTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGCGTATTCCACG > REL606/2966008‑2966076 | gtgtAAACCATCACCTGACGCTGTTTCATCAgcgc < 1:9871137/35‑1 (MQ=255) gtgtAAACCATCACCTGACGCTGTTTCATCAgcgc > 1:12507174/1‑35 (MQ=255) tttAAACCATCACCTGACGCTGTTTCATCAGCGCa < 1:15064643/33‑1 (MQ=255) tgtAAACCATCACCTGACGCTGTTTCATCAGCGCa < 1:8791843/35‑1 (MQ=255) tgtAAACCATCACCTGACGCTGTTTCATCAGCGCa < 1:16682974/35‑1 (MQ=255) tgtAAACCATCACCTGACGCTGTTTCATCAGCGCa > 1:8804414/1‑35 (MQ=255) tgtAAACCATCACCTGACGCTGTTTCATCAGCGCa < 1:15634479/35‑1 (MQ=255) tgtAAACCATCACCTGACGCTGTTTCATCAGCGCa > 1:15412560/1‑35 (MQ=255) gtAAACCATCCCCTGACGCTGTTTCATCAGCGCAg < 1:20097783/35‑1 (MQ=255) gtAAACCATCACCTGACGCTGTTTCATCAGCGCAg < 1:6348328/35‑1 (MQ=255) gtAAACCATCACCTGACGCTGTTTCATCAGCGCAg > 1:4420431/1‑35 (MQ=255) gtAAACCATCACCTGACGCTGTTTCATCAGCGCAg > 1:3443428/1‑35 (MQ=255) gtAAACCATCACCTGACGCTGTTTCATCAGCGCAg > 1:17324291/1‑35 (MQ=255) tAAACCATCCCCTGACGCTGTTTCATCAGCGCAGc < 1:16758732/35‑1 (MQ=255) tAAACCATCCCCTGACGCTGTTTCATCAGCGCAGc < 1:9200350/35‑1 (MQ=255) tAAACCATCATCTGACGCTGTTTCATCAGCGCAGc > 1:5972967/1‑35 (MQ=255) tAAACCATCACCTGACGCTGTTTCATCAGCGCAGc > 1:16029487/1‑35 (MQ=255) tAAACCATCACCTGACGCTGTTTCATCAGCGCAGc > 1:10169334/1‑35 (MQ=255) tAAACCATCACCTGACGCTGTTTCATCAGCGCAGc < 1:10953065/35‑1 (MQ=255) tAAACCATCACCTGACGCTGTTTCATCAGCGCAGc > 1:12656848/1‑35 (MQ=255) aaaCCATCACCTGACGCTGTTTCATCAGCGCAGcc > 1:8049626/1‑35 (MQ=255) aaaCCATCACCTGACGCTGTTTCATCAGCGCAGcc < 1:14305526/35‑1 (MQ=255) aaaCCATCACCTGACGCTGTTTCATCAGCGCAGcc < 1:15974738/35‑1 (MQ=255) aaaCCATCACCTGACGCTGTTTCATCAGCGCAGcc > 1:15338319/1‑35 (MQ=255) acccATCCCCTGACGCTGTTTCATCAGCGCAGCCa < 1:7464388/33‑1 (MQ=37) aaCCATCACCTGACGCTGTTTCATCAGCGCAGCCa > 1:7736947/1‑35 (MQ=255) aCCATCACCTGACGCTGGTTCATCAGCCCAGCCAt > 1:708012/1‑35 (MQ=37) ccATCACCTGACGCTGTTTCATCAGCGCAGCCAta > 1:3877331/1‑35 (MQ=255) cATCCCCTGACGCTGTTTCATAAGCGCAGCCAtac < 1:30973/35‑1 (MQ=37) cATCACCTGACGCTGTTTCATCAGCGCAGCCAtac > 1:18805879/1‑35 (MQ=255) cATCACCTGACGCTGTTTCATCAGCGCAGCCAtac > 1:3922187/1‑35 (MQ=255) aTCACCTGACGCTGTTTCATCAGCGCAGCCAtacg > 1:18850130/1‑35 (MQ=255) aTCACCTGACGCTGTTTCATCAGCGCAGCCAtacg > 1:4615999/1‑35 (MQ=255) aTCACCTGACGCTGTTTCATCAGCGCAGCCAtacg > 1:5553243/1‑35 (MQ=255) tCACCTGACGCTGTTTCATCAGCGCAGCCAtacgt > 1:19933321/1‑35 (MQ=255) cACCTGACGCTGTTTCATCAGCGCAGCCAtacgta > 1:15206143/1‑35 (MQ=255) cACCTGACGCTGGTTCATCAGCGCAGCCAtacgca > 1:18140306/1‑33 (MQ=37) aCCTGACGCTGTTTCATCAGCGCAGCCAtacgtac > 1:13097524/1‑35 (MQ=255) aCCTGACGCTGTTTCATCAGCGCAGCCAtacgtac > 1:8594843/1‑35 (MQ=255) cTGACGCTGTTTCATCAGCGCAGCCATACGTACgg > 1:10503367/1‑35 (MQ=255) cTGACGCTGTTTCATCAGCGCAGCCATACGTACgg > 1:19780035/1‑35 (MQ=255) cTGACGCTGTTTCATCAGCGCAGCCATACGTACgg > 1:1777784/1‑35 (MQ=255) cTGACGCTGTTTCATCAGCGCAGCCATACGTACgg > 1:14737818/1‑35 (MQ=255) tGACGCTGTTTCATCAGCGCAGCCATACGTACggg > 1:11683499/1‑34 (MQ=255) aCGCTGTTTCATCAGCGCAGCCATACGTACggggg > 1:12556144/1‑32 (MQ=255) aCGCTGTTTCATCAGCGCAGCCATACGTACGGCGt > 1:19773159/1‑35 (MQ=255) cTGTTTCATCAGCGCAGCCATACGTACGGCGTTAc > 1:17967643/1‑35 (MQ=255) cTGTTTCATCAGCGCAGCCATACGTACGGCGTTAc > 1:18414424/1‑35 (MQ=255) cTGTTTCATCAGCGCAGCAATACGTACGGCGTTAc < 1:9771081/35‑1 (MQ=255) tttttCATCCCCCCAGCCATACGTAGGGCGTTACg < 1:6380562/33‑1 (MQ=16) tGTTTCATCAGCGCAGCCATACGTACGGCGTTACg > 1:4349333/1‑35 (MQ=255) tGTTTCATCAGCGCAGCCATACGTACGGCGTTACg > 1:7517140/1‑35 (MQ=255) tGTTTCATCAGCGCAGCCATACGTACGGCGTTACg > 1:5013451/1‑35 (MQ=255) tGTTTCATCAGCGCAGCCATACGTACGGCGTTACg > 1:5377264/1‑35 (MQ=255) tGTTTCATCAGCGCAGCCATACGTACCGCGTTACg > 1:1143641/1‑35 (MQ=255) ttttCACCACCCCAGCCATACGTACGGCGTTACGt < 1:17812968/34‑1 (MQ=25) gTTTCATCAGCGCAGCCATACGTACGGCGTTACGt > 1:11932339/1‑35 (MQ=255) ttCATCAGCGCAGCCATACGTACGGCGTTACGTGc > 1:4903763/1‑35 (MQ=255) ttCACCAGCGCAGCCATACGTACGGCGTTACGTGc < 1:19000522/35‑1 (MQ=255) ttCACCACCCCAGCCATACGTACGGCGTTACGTGc < 1:13282479/35‑1 (MQ=25) ttCACCACCCCAGCCATACGTACGGCGTTACGTGc < 1:10191396/35‑1 (MQ=25) tcatcaGCGCAGCCATACGTACGGCGTTACGTGCg > 1:14046502/1‑35 (MQ=255) tcatcaGCGCAGCCATACGTACGGCGTTACGTGCg > 1:11455618/1‑35 (MQ=255) tgccaGCTCAGCCATACGTACGGCGTTACGTGCGt < 1:5215906/32‑1 (MQ=37) catcaGCGCAGCCATACGTACGGCGTTACGTGCGt > 1:20493229/1‑35 (MQ=255) catcaGCGCAGCCATACGTACGGCGTTACGTGCGt > 1:11145262/1‑35 (MQ=255) atcaGCGCAGCCATACGTACGGCGTTACGTGCGTa > 1:19436937/1‑35 (MQ=255) atcaGCGCAGCCATACGTACGGCGTTACGTGCGTa > 1:12385016/1‑35 (MQ=255) acccgccCAGCCATACGTACGGCGTTACGTGCGTa > 1:5911866‑M1/8‑35 (MQ=255) ccccccCAGCCATACGTACGGCGTTACGTGCGTAt > 1:15946502‑M1/7‑35 (MQ=255) ccccccCAGCCATACGTACGGCGTTACGTGCGTAt > 1:13720576‑M1/7‑35 (MQ=255) ccccccCAGCCATACGTACGGCGTTACGTGCGTAt > 1:17395078‑M1/7‑35 (MQ=255) cagccCAGCCATACGTACGGCGTTACGTGCGTAtt > 1:14382618‑M1/6‑35 (MQ=255) caGCGCAGCCATACGTACGGCGTTACGTGCGTAtt > 1:3313392/1‑35 (MQ=255) aGCGCAGCCATACGTACGGCGTTACGTGCGTATTc > 1:11660970/1‑35 (MQ=255) aGCGCAGCCATACGTACGGCGTTACGTGCGTATTc > 1:19993207/1‑35 (MQ=255) gcgcAGCCATACGTACGGCGTTACGTGCGTATTcc > 1:17924025/1‑35 (MQ=255) gccCAGCCATACGTACGGCGTTACGTGCGTATTcc > 1:2392042‑M1/4‑35 (MQ=255) cccCAGCCATACGTACGGCGTTACGTGCGTATTcc > 1:13202272‑M1/4‑35 (MQ=255) cccCAGCCATACGTACGGCGTTACGTGCGTATTcc > 1:3906031‑M1/4‑35 (MQ=255) cgcAGCCATACGTACTGCGTTACGTGCGTATTCCa > 1:18089606/1‑35 (MQ=255) cgcAGCCATACGTACGGCGTTACGTGCGTATTCCa > 1:11963295/1‑35 (MQ=255) cgcAGCCATACGGACGGCGTTACGTGCGTATTCCa > 1:5212246/1‑35 (MQ=255) ccCAGCCATACGTACGGCGTTACGTGCGTATTCCa > 1:17471403‑M1/3‑35 (MQ=255) caCAGCCATACGTACGGCGTTACGTGCGTATTCCa > 1:1676022‑M1/3‑35 (MQ=255) gcATCCATACGTACGGCGTTACGTGCGTATTCCAc > 1:5696742/1‑35 (MQ=255) gcATCCATACGTACGGCGTTACGTGCGTATTCCAc > 1:6745376/1‑35 (MQ=255) gcAGCCATACGTACGGCGTTACGTGCGTATTCCAc > 1:16743589/1‑35 (MQ=255) gcAGCCATACGTACGGCGTTACGTGCGTATTCCAc > 1:15117398/1‑35 (MQ=255) gcAGCCATACGTACGGCGTTACGTGCGTATTCCAc > 1:15039244/1‑35 (MQ=255) cCAGCCATACGTACGGCGTTACGTGCGTATTCCAc > 1:7099526‑M1/2‑35 (MQ=255) cCAGCCATACGTACGGCGTTACGTGCGTATTCCAc > 1:13892638‑M1/2‑35 (MQ=255) cCAGCCATACGTACGGCGTTACGTGCGTATTCCAc > 1:6757410‑M1/2‑35 (MQ=255) CAGCCATACGTACGGCGTTACGTGCGTATTCCACg > 1:2863671‑M1/1‑35 (MQ=255) CAGCCATACGTACGGCGTTACGTGCGTATTCCACg > 1:18348798‑M1/1‑35 (MQ=255) CAGCCATACGTACGGCGTTACGTGCGTATTCCACg > 1:17515025‑M1/1‑35 (MQ=255) CAGCCATACGTACGGCGTTACGTGCGTATTCCACg > 1:10560517‑M1/1‑35 (MQ=255) CAGCCATACGTACGGCGTTACGTGCGTATTCCACg < 1:16919270‑M1/35‑1 (MQ=255) CAGCCATACGTACGGCGTTACGTGCGTATTCCACg > 1:341619‑M1/1‑35 (MQ=255) CAGCCATACGTACGGCATTACGTGCGTATTCCACg > 1:5108752‑M1/1‑35 (MQ=255) | GTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGCGTATTCCACG > REL606/2966008‑2966076 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |