New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 4085856 = | 100 (0.970) | 24 (0.250) | 5/44 | NT | 23.2% | intergenic (+54/‑95) | cpxP/fieF | periplasmic protein combats stress/ferrous iron efflux protein F |
? | REL606 | 4214283 = | 67 (0.710) | coding (1595/1650 nt) | pgi | glucose‑6‑phosphate isomerase |
Only 100 of 164 total aligned reads displayed.
CTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGC > REL606/4214249‑4214317 | cTGCCAGAGCTGAAAGATGATAAAGAAATcagcag > 1:15980910/1‑35 (MQ=255) cTGCCAGAGCTGAAAGATGATAAAGAAATcagcag < 1:6862852/35‑1 (MQ=255) cTGCCAGAGCTGAAAGATGATAAAGAAATcagcag < 1:12037591/35‑1 (MQ=255) cTGCCAGAGCTGAAAGATGATAAAGAAATcagcag < 1:8541439/35‑1 (MQ=255) tGCCAGAGCTGAAAGATGATAAAGAAATCagcagc > 1:17230624/1‑35 (MQ=255) tGCCAGAGCTGAAAGATGATAAAGAAATCagcagc < 1:12236395/35‑1 (MQ=255) tGCCAGAGCTGAAAGATGATAAAGAAATCagcagc < 1:12321740/35‑1 (MQ=255) gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGcc > 1:13909685/1‑35 (MQ=255) gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGcc < 1:17314278/35‑1 (MQ=255) gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGcc > 1:12867781/1‑35 (MQ=255) ccAGAGCTGAAAGATGATAAAGAAATCAGCAGCCa < 1:4950963/35‑1 (MQ=255) ccAGAGCTGAAAGATGATAAAGAAATCAGCAGCCa > 1:15695856/1‑35 (MQ=255) cAGAGCTGAAAGATGATAAAGAAATCAGCAGCCAc > 1:9102785/1‑35 (MQ=255) cAGAGCTGAAAGATGATAAAGAAATCAGCAGCCAc > 1:18948155/1‑35 (MQ=255) cAGAGCTGAAAGATGATAAAGAAATCAGCAGCCAc > 1:9948250/1‑35 (MQ=255) agagCTGAAAGATGATAAAGAAATCAGCAGCCACg > 1:11351920/1‑35 (MQ=255) agagCTGAAAGATGATAAAGAAATCAGCAGCCACg > 1:16402234/1‑35 (MQ=255) agCTGAAAGATGATAAAGAAATCAGCAGCCACGAt > 1:9916964/1‑35 (MQ=255) agCTGAAAGATGATAAAGAAATCAGCAGCCACGAt > 1:15725895/1‑35 (MQ=255) gCTGAAAGATGATAAAGAAATCAGCAGCCACGATa > 1:12575303/1‑35 (MQ=255) gCTGAAAGATGATAAAGAAATCAGCAGCCACGATa > 1:17306000/1‑35 (MQ=255) cTGAAAGATGATAAAGAAATCAGCAGCCACGATAg > 1:1783721/1‑35 (MQ=255) cTGAAAGATGATAAAGAAATCAGCAGCCACGATAg > 1:16597704/1‑35 (MQ=255) cTGAAAGATGATAAAGAAATCAGCAGCCACGATAg > 1:4214602/1‑35 (MQ=255) cTGAAAGATGATAAAGAAATCAGCAGCCACGATAg > 1:6478594/1‑35 (MQ=255) gAAAGATGATAAAGAAATCAGCAGCCACGATAGCt > 1:17399340/1‑35 (MQ=255) gAAAGATGATAAAGAAATCAGCAGCCACGATAGCt > 1:2846559/1‑35 (MQ=255) gAAAGATGATAAAGAAATCAGCAGCCACGATAGCt > 1:9294372/1‑35 (MQ=255) aaaGATGATAAAGAAATCAGCAGCCACGATAGCTc > 1:19252595/1‑35 (MQ=255) aaaGATGATAAAGAAATCAGCAGCCACGATAGCTc > 1:19489000/1‑35 (MQ=255) aaaGATGATAAAGAAATCAGCAGCCACGATAGCTc > 1:12458764/1‑35 (MQ=255) aaaGATGATAAAGAAATCAGCAGCCACGATAGCTc > 1:2313671/1‑35 (MQ=255) aaaGATGATAAAGAAATCAGCAGCCACGATAGCTc > 1:16537270/1‑35 (MQ=255) aaaGATGATAAAGAAATCAGCAGCAACGATAGCTc < 1:4743059/35‑1 (MQ=255) aaaGATGAAAAAAAAACCACCAGCCACGATAGCTc < 1:20102665/35‑1 (MQ=12) aaGATGATAAAGAAATCAGCAGCCACGATAGCTCg > 1:14505859/1‑35 (MQ=255) aaGATAAAAAAAAAACCACCAGCCACGATAGCTCg < 1:2187362/35‑1 (MQ=12) aGATGATAAAGAAATCAGCAGCCATGATAGCTCGa > 1:6851478/1‑35 (MQ=255) aGATGATAAAGAAATCAGCAGCCACGATAGCTCGa > 1:12841872/1‑35 (MQ=255) aGATAAAAAAAAAACCACCAGCCACGATAGCTCGa < 1:20159882/35‑1 (MQ=12) atgatAAAGAAATCAGCAGCCACGATAGCTCGAcc > 1:16362938/1‑35 (MQ=255) atgatAAAGAAATCAGCAGCCACGATAGCTCGAcc > 1:13436761/1‑35 (MQ=255) atgatAAAGAAATCAGCAGCCACGATAGCTCGAcc > 1:15166587/1‑35 (MQ=255) gatAAAGAAATCAGCAGCCACGATAGCTCGACCaa > 1:10331530/1‑35 (MQ=255) aaaaaaaaaacccccaGCCACGATAGCTCGACCaa < 1:11125523‑M2/19‑1 (MQ=255) aaaaaaaaaacccccaGCCACGATAGCTCGACCaa < 1:14417619‑M2/19‑1 (MQ=255) ataaaaaaacccccaGCCACGATAGCTCGACCAAt < 1:20308495‑M2/20‑1 (MQ=255) aaaaagaaacccccaGCCACGATAGCTCGACCAAt < 1:4561742‑M2/20‑1 (MQ=255) aaaaaaaaacccccaGCCACGATAGCTCGACCAAt < 1:6242381‑M2/20‑1 (MQ=255) tAAAGAAATCAGCAGCCACGATAGCTCGACCAATg > 1:9581196/1‑35 (MQ=255) tAAAGAAATCAGCAGCCACGATAGCTCGACCAATg > 1:14122934/1‑35 (MQ=255) tAAAGAAATCAGCAGCCACGATAGCTCGACCAATg > 1:1969533/1‑35 (MQ=255) tAAAGAAATCAGCAGCCACGATAGCTCGACCAATg > 1:16340402/1‑35 (MQ=255) aaaaaaaacccccaGCCACGATAGCTCGACCAATg < 1:7855256‑M2/21‑1 (MQ=255) aaaaaaaacccccaGCCACGATAGCTCGACCAATg < 1:9571317‑M2/21‑1 (MQ=255) aaaaaaaacccccaGCCACGATAGCTCGACCAATg < 1:11234372‑M2/21‑1 (MQ=255) aaaaaaccccccaGCCACGATAGCTCGACCAATgg < 1:18818946‑M2/22‑1 (MQ=255) aaaaaaacccccaGCCACGATAGCTCGACCAATgg < 1:2118457‑M2/22‑1 (MQ=255) aaaaaaacccccaGCCACGATAGCTCGACCAATgg < 1:12154751‑M2/22‑1 (MQ=255) aaaaaaaccaccaGCCACGATAGCTCGACCAATgg < 1:10149824‑M2/22‑1 (MQ=255) aaaGAAATCAGCAGCCACGATAGCTCTACCAATgg > 1:10300723/1‑35 (MQ=255) aGAAATCAGCAGCCACGATAGCTCGACCAATGGTc > 1:13945385/1‑35 (MQ=255) aGAAATCAGCAGCCACGATAGCTCGACCAATGGTc > 1:8710282/1‑35 (MQ=255) gAAATCAGCAGCCACGATAGCTCGACCAATGGTCt > 1:289724/1‑35 (MQ=255) gAAATCAGCAGCCACGATAGCTCGACCAATGGTCt > 1:18161245/1‑35 (MQ=255) gAAATCAGCAGCCACGATAGCTCGACCAATGGTCt > 1:17158915/1‑35 (MQ=255) aaaacccccaGCCACGATAGCTCGACCAATGGTCt < 1:20032548‑M2/25‑1 (MQ=255) aaacccccaGCCACGATAGCTCGACCAATGGTCTg < 1:15158048‑M2/26‑1 (MQ=255) aaaTCAGCAGCCACGATAGCTCGACCAATGGTCTg > 1:6722008/1‑35 (MQ=255) aaaTCAGCAGCCACGATAGCTCGACCAATGGTCTg > 1:3657769/1‑35 (MQ=255) aacccccaGCCACGATAGCTCGACCAATGGTCTGa < 1:8010719‑M2/27‑1 (MQ=255) aacccccaGCCACGATAGCTCGACCAATGGTCTGa < 1:9177471‑M2/27‑1 (MQ=255) aTCAGCAGCCACGATAGCTCGACCAATGGGCTGAn > 1:7726484/1‑35 (MQ=255) tCAGCAGCCACTATAGCTCGACCAATGGTCTGAtt > 1:15029244/1‑35 (MQ=255) tCAGCAGCCACGATAGCTCGACCAATGGTCTGAtt > 1:17649220/1‑35 (MQ=255) gccccaGCCACGATAGCTCGACCAATGGTCTGAtt < 1:11703544‑M2/29‑1 (MQ=255) ccccaGCCACGATAGCTCGACCAATGGTCTGATTa < 1:15677561‑M2/30‑1 (MQ=255) cagcagCCACGATAGCTCGACCAATGGTCTGATTa > 1:8827458/1‑35 (MQ=255) cagcagCCACGATAGCTCGACCAATGGTCTGATTa > 1:9998431/1‑35 (MQ=255) cagcagCCACGATAGCTCGACCAATGGTCTGATTa > 1:4521274/1‑35 (MQ=255) cagcagCCACGATAGCTCGACCAATGGTCTGATTa > 1:19252396/1‑35 (MQ=255) cccaGCCACGATAGCTCGACCAATGGTCTGATTaa < 1:16986395‑M2/31‑1 (MQ=255) cccaGCCACGATAGCTCGACCAATGGTCTGATTaa < 1:18781774‑M2/31‑1 (MQ=255) agcagcCACGATAGCTCGACCAATGGTCTGATTaa > 1:10850925/1‑35 (MQ=255) agcagcCACGATAGCTCGACCAATGGTCTGATTaa > 1:12212098/1‑35 (MQ=255) agcagcCACGATAGCTCGACCAATGGTCTGATTaa > 1:17930165/1‑35 (MQ=255) accaGCCACGATAGCTCGACCAATGGTCTGATTaa < 1:15416521‑M2/31‑1 (MQ=255) ccaGCCACGATAGCTCGACCAATGGTCTGATTAAc < 1:15435378‑M2/32‑1 (MQ=255) ccaGCCACGATAGCTCGACCAATGGTCTGATTAAc < 1:6552748‑M2/32‑1 (MQ=255) caGCCACGATAGCTCGACCAATGGTCTGATTAAcc < 1:18671073‑M2/33‑1 (MQ=255) caGCCACGATAGCTCGACCAATGGTCTGATTAAcc > 1:264802‑M2/3‑35 (MQ=255) caGCCACGATAGCTCGACCAATGGTCTGATTAAcc < 1:9732069‑M2/33‑1 (MQ=255) aGCCACGATAGCTCGGCCAATGGTCTGATTAACCg > 1:1002665‑M2/2‑35 (MQ=255) aGCCACGATAGCTCGACCAATGGTCTGATTAACCg > 1:7940061‑M2/2‑35 (MQ=255) aGCCACGATAGCTCGACCAATGGTCTGATTAACCg < 1:7752239‑M2/34‑1 (MQ=255) aGCCACGATAGCTCGACCAATGGTCTGATTAACCg < 1:5280031‑M2/34‑1 (MQ=255) gcCACGATAGCTCGACCAATTGTCTGATTAACCGc > 1:20560850/1‑35 (MQ=255) gcCACGATAGCTCGACCAATGGTCTGATTAACCGc > 1:19771660/1‑35 (MQ=255) gcCACGATAGCTCGACCAATGGTCTGATTAACCGc < 1:6255888/35‑1 (MQ=255) gcCACGATAGCTCGACCAATGGTCTGATTAACCGc > 1:6759722/1‑35 (MQ=255) | CTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGC > REL606/4214249‑4214317 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |