Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 2,122,426 IS150 (–) +3 bp 46.2% coding (198‑200/216 nt) ECB_02013 ← conserved hypothetical protein; putative exported protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2122426 =47 (0.520)48 (0.470) 32/48 NT 47.2% coding (200/216 nt) ECB_02013 conserved hypothetical protein; putative exported protein
?REL606 = 2775877 NA (NA)noncoding (1/1443 nt) IS150 repeat region
* ? REL606 = 212242846 (0.540)32 (0.320) 21/46 NT 37.7% coding (198/216 nt) ECB_02013 conserved hypothetical protein; putative exported protein
?REL606 2774435 = NA (NA)noncoding (1443/1443 nt) IS150 repeat region

Only 100 of 234 total aligned reads displayed.

TTGTACCGTTGAAAGCCCCTACTGGTGACACCCTAAATATCCCTTACACGGGCTTATTTTTTTATGCAT  >  REL606/2122392‑2122460
                                  |                                  
ttGTACCGTTGAAAGCCCCTACTGTTGACACCCTa                                    >  1:2606255/1‑35 (MQ=255)
ttGTACCGTTGAAAGCCCCTACTGGTGACACCCTa                                    <  1:13194976/35‑1 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcggtacaa                                    >  1:12573756‑M1/35‑35 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    >  1:16159723‑M1/35‑35 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    >  1:18488119‑M1/35‑35 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    <  1:2430416‑M1/1‑1 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    <  1:12863753‑M1/1‑1 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    >  1:12499555‑M1/35‑35 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    >  1:5362827‑M1/35‑35 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    >  1:6329413‑M1/35‑35 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    >  1:8577451‑M1/35‑35 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    <  1:8847715‑M1/1‑1 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    >  1:8987886‑M1/35‑35 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    <  1:9081863‑M1/1‑1 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    >  1:9554216‑M1/35‑35 (MQ=255)
ccatttcatcgtccaacaaaatgggtgcagtacaa                                    <  1:10034006‑M1/1‑1 (MQ=255)
 tGTCCCGTTGAAAGCCCCTACTGGTGACACCCTaa                                   <  1:11865867/35‑1 (MQ=255)
 tGTACCGTTGAAAGCCCCTACTGGTGACACCCTaa                                   >  1:17436085/1‑35 (MQ=255)
 catttcatcgtccaacaaaatgggtgcagtacaaa                                   >  1:5853634‑M1/34‑35 (MQ=255)
 catttcatcgtccaacaaaatgggtgcagtacaaa                                   <  1:11499761‑M1/2‑1 (MQ=255)
 catttcatcgtccaacaaaatgggtgcagtacaaa                                   <  1:18702934‑M1/2‑1 (MQ=255)
 catttcatcgtccaacaaaatgggtgcagtacaaa                                   <  1:18255585‑M1/2‑1 (MQ=255)
 catttcatcgtccaacaaaatgggtgcagtacaaa                                   <  1:16623817‑M1/2‑1 (MQ=255)
  gtcccGTTGAAAGCCCCTACTGGTGACACCCTaaa                                  <  1:9832030/32‑1 (MQ=255)
  atttcatcgtccaacaaaatgggtgcagtacaaaa                                  <  1:2540407‑M1/3‑1 (MQ=255)
  atttcatcgtccaacaaaatgggtgcagtacaaaa                                  <  1:8538996‑M1/3‑1 (MQ=255)
  atttcatcgtccaacaaaatgggtgcagtacaaaa                                  <  1:8175373‑M1/3‑1 (MQ=255)
  atACAGTTGAAAGCCCCTACTGGTGACGCCCTaaa                                  <  1:4401612/34‑1 (MQ=37)
   tttcatcgtccaacaaaatgggtgcagtacaagtg                                 <  1:11956294‑M1/4‑4 (MQ=255)
   tttcatcgtccaacaaaatgggtgcagtacaagtg                                 <  1:20444139‑M1/4‑4 (MQ=255)
   tttcatcgtccaacaaaatgggtgcagtacaAAat                                 >  1:184065‑M1/32‑35 (MQ=255)
   tcccgtTGAAAGCCCCTACTGGTGACACCCTAAAt                                 <  1:19995641‑M1/33‑2 (MQ=255)
   tACCGTTGAAAGCCCCTACTGGTGACACCCTAAAt                                 >  1:7500808‑M1/1‑34 (MQ=255)
     tcatcgtccaacaaaatgggtgcagtacaAAatat                               >  1:8071808‑M1/30‑35 (MQ=255)
      catcgtccaacaaaatgggtgcagtacaAAATATc                              <  1:10396351‑M1/7‑1 (MQ=255)
       gTTGAAAGCCCCTACTGGTGACACCATAAAtgtac                             <  1:18277533‑M1/35‑6 (MQ=255)
        ttGAAAGCCCCTACTGGTGACACCCTAAATATccc                            >  1:13324567/1‑35 (MQ=255)
        tcgtccaacaaaatgggtgcagtacaAAATATccc                            >  1:3099599‑M1/27‑35 (MQ=255)
         cgtccaacaaaatgggtgcagtacaAAATATCCCt                           >  1:4595473‑M1/26‑35 (MQ=255)
         cgtccaaaaaaatgggtgcagtacaAAATATCCCt                           >  1:18353084‑M1/26‑35 (MQ=255)
          gtccaacaaaatgggtgcagtacaAAATATCCCtt                          >  1:3620244‑M1/25‑35 (MQ=255)
           tccaacaaaatgggtgcagtacaAAATATCCCTTa                         <  1:11343143‑M1/12‑1 (MQ=255)
            aaGCCCCTACTGGTGACACCCTAAATATCCCTTac                        <  1:2324629/35‑1 (MQ=255)
             caacaaaatgggtgcagtacaAAATATCCCTTaca                       >  1:5645837‑M1/22‑35 (MQ=255)
             aGCCCCTACTGGTGACACCCTAAAtgtactgaccc                       <  1:19221172‑M1/35‑12 (MQ=255)
             aGCCCCTACTGGTGACACCCTAAATATCCCTTaca                       <  1:15362943/35‑1 (MQ=255)
             aGCCCCTACTGGTGACACCCTAAATATCCCTTaca                       <  1:15016791/35‑1 (MQ=255)
             aGCCCCTACTGGTGACACCCTAAATATCCCTTaca                       <  1:2526921/35‑1 (MQ=255)
              gCCCCTACTGGTGACACCCTAAATATCCCTTacac                      <  1:14401906/35‑1 (MQ=255)
              aacaaaatgggtgcagtacaAAATATCCCTTacac                      >  1:13903239‑M1/21‑35 (MQ=255)
               ccccTACTGGTGACACCCTAAATATCCCTTACACg                     <  1:18214813/35‑1 (MQ=255)
               acaaaatgggtgcagtacaAAATATCCCTTACACg                     <  1:6613535‑M1/16‑1 (MQ=255)
               acaaaatgggtgcagtacaAAATATCCCTTACACg                     <  1:5231344‑M1/16‑1 (MQ=255)
               acaaaatgggtgcagtacaAAATATCCCTTACACg                     >  1:5387713‑M1/20‑35 (MQ=255)
                caaaatgggtgcagtacaAAATATCCCTTACACgg                    >  1:20556830‑M1/19‑35 (MQ=255)
                 ccTACTGGTGACACCCTAAAtgtactgaccccaaa                   <  1:4694058‑M1/35‑16 (MQ=255)
                 ccTACTGGTGACACCCTAAAtgtactgaccccaaa                   <  1:19378091‑M1/35‑16 (MQ=255)
                 ccTACTGGTGACACCCTAAATATCCCTTACACggg                   >  1:15803092/1‑35 (MQ=255)
                 aaaatgggtgcagtacaAAATATCCCTTACACggg                   <  1:5485625‑M1/18‑1 (MQ=255)
                 aaaatgggtgcagtacaAAATATCCCTTACACggg                   >  1:6991668‑M1/18‑35 (MQ=255)
                  cTACTGGTGACACCCTAAAtgtactgaccctaaaa                  >  1:15794769‑M1/1‑19 (MQ=255)
                  cTACTGGTGACACCCTAAATATCCCTTACACGGGc                  <  1:19645282/35‑1 (MQ=255)
                   tACTGGTGACACCCTAAATATCCCTTACACGGGCt                 <  1:771243/35‑1 (MQ=255)
                   tACTGGTGACACCCTAAATATCCCTTACACGGGCt                 >  1:16481260/1‑35 (MQ=255)
                    atgggtgcagtacaAAATATCCCTTACACGGGCtt                >  1:8665799‑M1/15‑35 (MQ=255)
                    atgggtgcagtacaAAATATCCCTTACACGGGCtt                <  1:3301895‑M1/21‑1 (MQ=255)
                     tgggtgcagtacaAAATATCCCTTACACGGGCTTa               >  1:20238126‑M1/14‑35 (MQ=255)
                     cTGGTGACACCCTAAAtgtactgaccccaaaaagt               >  1:11143083‑M1/1‑16 (MQ=255)
                     cTGGTGACACCCTAAATATCCCTTACACGGGCTTa               >  1:16887828/1‑35 (MQ=255)
                     cTGGTGACACCCTAAATATCCCTTACACGGGCTTa               >  1:9817432/1‑35 (MQ=255)
                      tGGTGACACCCTAAAtgtactgaccccaaaaagtt              >  1:17765434‑M1/1‑15 (MQ=255)
                      tGGTGACACCCTAAATATCCCTTACACGGGCTTAt              >  1:8397892/1‑35 (MQ=255)
                      gggtgcagtacaAAATATCCCTTACACGGGCTTAt              <  1:9238744‑M1/23‑1 (MQ=255)
                       ggTGACACCCTAAATATCCCTTACACGGGCTTAtt             <  1:7221391/35‑1 (MQ=255)
                        gtgcagtacaAAATATCCCTTACACGGGCTTAttt            <  1:3732648‑M1/25‑1 (MQ=255)
                        gtgcagtacaAAATATCCCTTACACGGGCTTAttt            >  1:131535‑M1/11‑35 (MQ=255)
                        gTGACACCCTAAATATCCCTTACACGGTCTTAttt            >  1:15582730/1‑35 (MQ=255)
                        gTGACACCCTAAATATCCCTTACACGGGCTTAttt            <  1:18575590/35‑1 (MQ=255)
                        gTGACACCCTAAATATCCCTTACACGGGCTTAttt            <  1:11007340/35‑1 (MQ=255)
                         tgcagtacaAAATATCCCTTACACGGGCTTAtttt           >  1:12128975‑M1/10‑35 (MQ=255)
                         tgcagtacaAAATATCCCTTACACGGGCTTAtttt           <  1:15873634‑M1/26‑1 (MQ=255)
                         tGACACCCTAAAtgtactgaccccaaaaagttgga           >  1:8710390‑M1/1‑12 (MQ=255)
                          gcagtacaAAATATCCCTTACACGGGCTTAttttt          >  1:10121850‑M1/9‑35 (MQ=255)
                          gACACCCTAAAtgtactgaccccaaaaagttggac          >  1:10864864‑M1/1‑11 (MQ=255)
                           acacCCTAAATATCCCTTACACGGGCTTAtttttt         <  1:6137358/35‑1 (MQ=255)
                           acacCCTAAATATCCCTTACACGGGCTTAtttttt         >  1:20598909/1‑35 (MQ=255)
                            cacCCTAAAtgtactgaccccaaaaagttggacag        <  1:14295870‑M1/35‑27 (MQ=255)
                            cacCCTAAAtgtactgaccccaaaaagttggacag        <  1:16988363‑M1/35‑27 (MQ=255)
                            cacCCTAAATATCCCTTACACGGGCTTAttttttt        >  1:9455197/1‑35 (MQ=255)
                            agtacaAAATATCCCTTACACGGGCTTAttttttt        <  1:3841350‑M1/29‑1 (MQ=255)
                             gtacaAAATATCCCTTACACGGGCTTATTTTTTTa       <  1:12191812‑M1/30‑1 (MQ=255)
                             gtacaAAATATCCCTTACACGGGCTTATTTTTTTa       <  1:19782025‑M1/30‑1 (MQ=255)
                             acCCTAAATATCCCTTACACGGGCTTATTTTTTTa       <  1:15669005/35‑1 (MQ=255)
                               ccTAAAtgtactgaccccaaaaagttggacagtta     >  1:6963453‑M1/1‑6 (MQ=255)
                               ccTAAATATCCCTTACACGGGCTTATTTTTTTATg     >  1:13450414/1‑35 (MQ=255)
                                cTAAAtgtactgaccccaaaaagttggacagttaa    <  1:3135134‑M1/35‑31 (MQ=255)
                                 aAAATATCCCTTACACGGGCTTATTTTTTTATGCa   >  1:17146471‑M1/2‑35 (MQ=255)
                                  aaaTATCCCTTACACGGGCTTATTTTTTTATGCAt  <  1:15237132/35‑1 (MQ=255)
                                  aaaTATCCCTTACACGGGCTTATTTTTTTATGCAt  <  1:18909100/35‑1 (MQ=255)
                                  aaaTATCCCTTACACGGGCTTATTTTTTTATGCAt  >  1:11774335/1‑35 (MQ=255)
                                  |                                  
TTGTACCGTTGAAAGCCCCTACTGGTGACACCCTAAATATCCCTTACACGGGCTTATTTTTTTATGCAT  >  REL606/2122392‑2122460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.