New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2176060 = | 63 (0.610) | 6 (0.080) | 3/36 | NT | 7.3% | coding (49/933 nt) | pbpG | D‑alanyl‑D‑alanine endopeptidase |
? | REL606 | 3882315 = | 105 (1.360) | coding (103/816 nt) | atpB | F0F1 ATP synthase subunit A |
Only 100 of 114 total aligned reads displayed.
GCCGTTTTCGCAACGGCCTGCGGTGCAAAAGGCACAGCCAGCATCAGGGCCAGGCTAAATAAAGAAACT > REL606/2176026‑2176094 | gCCGTTTTCGCACCGGCCTGCGGTGCAAAAGGcac < 1:12675098/35‑1 (MQ=255) gCCGTTTTCGCAACGGCCTGCGGTGCAAAAGGcac > 1:18809627/1‑35 (MQ=255) gCCGTTTTCGCAACGGCCTGCGGTGCAAAAGGcac > 1:2933409/1‑35 (MQ=255) ccGTTTTCGCACCGGCCTGCGGTGCAAAAGGcaca < 1:8215223/35‑1 (MQ=255) ccGTTTTCGCACCGGCCTGCGGTGCAAAAGGcaca < 1:1169930/35‑1 (MQ=255) ccGTTTTCGCAACGGCCTGCGGTGCAAAAGGcacg < 1:1215587/35‑2 (MQ=255) ccGTTTTCGCAACGGCCTGCGGTGCAAAAGGcaca > 1:7413905/1‑35 (MQ=255) ccGTTTTCGCAACGGCCTGCGGTGCAAAAGGcaca < 1:2913049/35‑1 (MQ=255) cGTTTTCGCACCGGCCTGCGGTGCAAAAGGCAcag < 1:13234644/35‑1 (MQ=255) cGTTTTCGCAACGGCCTGCGGTGCAAAAGGCAcag > 1:9136623/1‑35 (MQ=255) gTTTTCGCAACGGCCTGCGGTGCAAAAGGCAcagc > 1:1031429/1‑35 (MQ=255) gTTTTCGCAACGGCCTGCGGTGCAAAAGGCAcagc > 1:5969127/1‑35 (MQ=255) ttttCGCAACGGCCTGCGGTGCAAAAGGCAcagcc > 1:17409944/1‑35 (MQ=255) tttCGCAACGGCCTGCGGTGCAAAATGCAcagcca > 1:15034626/1‑35 (MQ=255) tttCGCAACGGCCTGCGGTGCAAAAGGCAcagcca > 1:17116633/1‑35 (MQ=255) tttCGCAACGGCCTGCGGTGCAAAAGGCAcagcca > 1:2228735/1‑35 (MQ=255) tttCGCAACGGCCTGCGGTGCAAAAGGCAcagcca > 1:17624071/1‑35 (MQ=255) ttCGCAACTGCCTGCGGTGCAAAAGGCAcagccag > 1:3866901/1‑35 (MQ=255) ttCGCAACGGCCTGCTGTGCAAAAGGCAcagccag > 1:18851023/1‑35 (MQ=255) ttCGCAACGGCCTGCGGTGCAAAAGGCAcagccag > 1:18435627/1‑35 (MQ=255) ttCGCAACGGCCTGCGGTGCAAAAGGCAcagccag > 1:14654082/1‑35 (MQ=255) ttCGCAACGGCCTGCGGTGCAAAAGGCAcagccag > 1:5870428/1‑35 (MQ=255) tCGCAACGGCCTGCGGTGCAAAAGGCAcagccagc > 1:16457200/1‑35 (MQ=255) cGCAACGGCCTGCGGTGCAAAAGGCACAGCCAGCa > 1:5233547/1‑35 (MQ=255) gCAACTGCCTGCGGTGCAAAAGGCACAGCCAGCAt > 1:10007857/1‑35 (MQ=255) cAACGGCCTGCGGTGCAAAAGGCACAGCCAGCacc > 1:20584744/1‑33 (MQ=255) cAACGGCCTGCGGTGCAAAAGGCACAGCCAGCATc > 1:2781231/1‑35 (MQ=255) cAACGGCCTGCGGTGCAAAAGGCACAGCCAGCATc > 1:16904723/1‑35 (MQ=255) cAACGGCCTGCGGCGCAAAAGGCACAGCCAGCATc > 1:703766/1‑35 (MQ=255) ccGGCCGGCGGTGCAAAAGGCACAGCTAGCATCAg < 1:8956635/34‑1 (MQ=37) aCGGCCTGCGGTGCAAAAGGCACAGCCAGCATCAg > 1:14834747/1‑35 (MQ=255) cGGCCTGCGGTGCAAAAGGCACAGCCAGCATCAgg > 1:222885/1‑35 (MQ=255) cGGCCTGCGGTGCAAAAGGCACAGCCAGCATCAgg > 1:804673/1‑35 (MQ=255) cGGCCTGCGGTGCAAAAGGCACAGCCAGCATCAgg > 1:584263/1‑35 (MQ=255) ggCCTGCGGTGCAAAAGGCACAGCCAGCATCAggg > 1:1702235/1‑35 (MQ=255) ggCCTGCGGTGCAAAAGGCACAGCCAGCATCAggg > 1:10059349/1‑35 (MQ=255) gCCTGCGGTGCAAAAGGCACAGCCAGCATCAggtc > 1:8181979/1‑33 (MQ=255) gCCTGCGGTGCAAAAGGCACAGCCAGCATCAGGGc > 1:4933692/1‑35 (MQ=255) gCCTGCGGTGCAAAAGGCACAGCCAGCATCAGGGc > 1:13997447/1‑35 (MQ=255) ccTGCGGTGCAAAAGGCACAGCCAGCATCAGGGcc > 1:6270148/1‑35 (MQ=255) ccTGCGGTGCAAAAGGCACAGCCAGCATCAGGGcc > 1:5750858/1‑35 (MQ=255) ccTGCGGTGCAAAAGGCACAGCCAGCATCAGGGcc > 1:2562951/1‑35 (MQ=255) cTGCGGTGCAAAAGGCACAGCCAGCATCAGGTCCa > 1:3023533/1‑35 (MQ=255) cTGCGGTGCAAAAGGCACAGCCAGCATCAGGGCCa > 1:16721832/1‑35 (MQ=255) tGCGGTGCAAAAGGCACAGCCAGCATCAGGGCCAg > 1:9635721/1‑35 (MQ=255) tGCGGTGCAAAAGGCACAGCCAGCATCAGGGCCAg > 1:18147107/1‑35 (MQ=255) cGGTGCAAAAGGCACAGCCAGCATCAGGGCCAGGc > 1:684586/1‑35 (MQ=255) ggTGCAAAAGGCACAGCAAGCATCAGGGCCAGGCt < 1:19472642/35‑1 (MQ=255) gTGCAAAAGGCACAGCCAGCATCAGGGCCAGGCta > 1:703545/1‑35 (MQ=255) gTGCAAAAGGCACAGCCAGCATCAGGGCCAGGCta > 1:149438/1‑35 (MQ=255) gTGCAAAAGGCACAGCCAGCATCAGGGCCAGGCta > 1:12057350/1‑35 (MQ=255) tGCAAAAGGCACAGCCAGCATCATGGCCAGGCtaa > 1:19143338/1‑35 (MQ=255) tGCAAAAGGCACAGCCAGCATCAGGGCCAGGCtaa > 1:7146162/1‑35 (MQ=255) gCAAAAGGCACAGCCAGCATCAGGGCCAGGCtaaa > 1:15681700/1‑35 (MQ=255) gCAAAAGGCACAGCCAGCATCAGGGCCAGGCtaaa > 1:1881099/1‑35 (MQ=255) gCAAAAGGCACAGCAAGCATCAGGGCCAGGCtaaa < 1:14503439/35‑1 (MQ=255) caaacgcccCAGCCAGCATCAGGGCCAGGCtaaat > 1:6262844‑M1/10‑35 (MQ=255) cAAAAGGCACAGCCAGCATCAGGGCCAGGCtaaat > 1:9194371/1‑35 (MQ=255) cAAAAGGCACAGCCAGCATCAGGGCCAGGCtaaat > 1:10596240/1‑35 (MQ=255) aacacccccCAGCCAGCATCAGGGCCAGGCtaaat > 1:5047186‑M1/10‑35 (MQ=255) aaaacccccCAGCCAGCATCAGGGCCAGGCtaaat > 1:10409437‑M1/10‑35 (MQ=255) ccccccccCAGCCAGCATCAGGGCCAGGCtaaata > 1:1002430‑M1/9‑35 (MQ=255) ccccccccCAGCCAGCATCAGGGCCAGGCtaaata > 1:7651163‑M1/9‑35 (MQ=255) acccccccCAGCCAGCATCAGGGCCAGGCtaaata > 1:2238730‑M1/9‑35 (MQ=255) aaccccccCAGCCAGCATCAGGGCCAGGCtaaata > 1:1127276‑M1/9‑35 (MQ=255) aaacccccCAGCCAGCATCAGGGCCAGGCtaaata > 1:1027871‑M1/9‑35 (MQ=255) aaaaGGCACAGCCAGCATCAGGGCCAGGCtaaata > 1:4422852/1‑35 (MQ=255) aaaaGGCACAGCCAGCATCAGGGCCAGGCtaaata > 1:4685272/1‑35 (MQ=255) aaaaGGCACAGCCAGCATCAGGGCCAGGCtaaaag > 1:16121469/1‑33 (MQ=255) aaaaGGCACAGCCAGCATCAGGGCCAGGCtaaaag > 1:9436863/1‑33 (MQ=255) cccccccCAGCCAGCATCAGGGCCAGGCtaaataa > 1:10562893‑M1/8‑35 (MQ=255) cccccccCAGCCAGCATCAGGGCCAGGCtaaataa > 1:6914071‑M1/8‑35 (MQ=255) cccccccCAGCCAGCATCAGGGCCAGGCtaaataa > 1:4032022‑M1/8‑35 (MQ=255) cccccccCAGCCAGCATCAGGGCCAGGCtaaataa > 1:11191453‑M1/8‑35 (MQ=255) cccccccCAGCCAGCATCAGGGCCAGGCtaaataa > 1:2391018‑M1/8‑35 (MQ=255) aacccccCAGCCAGCATCAGGGCCAGGCtaaataa > 1:9544601‑M1/8‑35 (MQ=255) aaaGGCACAGCCAGCATCAGGGCCAGGCtaaataa > 1:11140616/1‑35 (MQ=255) aaaGGCACAGCCAGCATCAGGGCCAGGCtaaataa > 1:3136695/1‑35 (MQ=255) aaaGGCACAGCCAGCATCAGGGCCAGGCtaaataa > 1:11299561/1‑35 (MQ=255) ccccccCAGCCAGCATCAGGGCCAGGCtaaataaa > 1:783790‑M1/7‑35 (MQ=255) ccccccCAGCCAGCATCAGGGCCAGGCtaaataaa > 1:8719839‑M1/7‑35 (MQ=255) ccccccCAGCCAGCATCAGGGCCAGGCtaaataaa > 1:15309591‑M1/7‑35 (MQ=255) ccccccCAGCCAGCATCAGGGCCAGGCtaaataaa > 1:5785664‑M1/7‑35 (MQ=255) ccccccCAGCCAGCATCAGGGCCAGGCtaaataaa > 1:18436694‑M1/7‑35 (MQ=255) aaGGCACATCCAGCATCAGGGCCAGGCtaaataga > 1:19699292/1‑33 (MQ=37) aGGCACAGCCAGCATCAGGGCCAGGCTAAATAAAg > 1:16065769/1‑35 (MQ=255) ggCACAGCCAGCATCAGGGCCAGGCTAAATAAAGa > 1:19328895/1‑35 (MQ=255) ggCACAGCCAGCATCAGGGCCAGGCTAAATAAAGa > 1:562110/1‑35 (MQ=255) gCACAGCCAGCATCAGGGCCAGGCTAAATAAAGaa > 1:7088977/1‑35 (MQ=255) gCACAGCCAGCATCAGGGCCAGGCTAAATAAAGaa > 1:17381027/1‑35 (MQ=255) gCACAGCCAGCATCAGGGCCAGGCTAAATAAAGaa > 1:3170053/1‑35 (MQ=255) cacaGCCAGCATCAGGGCCAGGCTAAATAAAGaaa > 1:19995830/1‑35 (MQ=255) cCAGCCAGCATCAGGGCCAGGCTAAATAAAGAAAc > 1:15758682‑M1/2‑35 (MQ=255) CAGCCAGCATCAGGGCCAGGCTAAATAAAGAAacn < 1:9635932‑M1/35‑2 (MQ=255) CAGCCAGCATCAGGGCCAGGCTAAATAAAGAAACt > 1:3695799‑M1/1‑35 (MQ=255) CAGCCAGCATCAGGGCCAGGCTAAATAAAGAAACt > 1:20149705‑M1/1‑35 (MQ=255) CAGCCAGCATCAGGGCCAGGCTAAATAAAGAAACt < 1:1363674‑M1/35‑1 (MQ=255) CAGCCAGCATCAGGGCCAGGCTAAATAAAGAAACt > 1:18663671‑M1/1‑35 (MQ=255) CAGCCAGCATCAGGGCCAGGCTAAATAAAGAAACt > 1:9588893‑M1/1‑35 (MQ=255) CAGACAGCATCAGGGCCAGGCTAAATAAAGAAACt > 1:4756469‑M1/1‑35 (MQ=255) | GCCGTTTTCGCAACGGCCTGCGGTGCAAAAGGCACAGCCAGCATCAGGGCCAGGCTAAATAAAGAAACT > REL606/2176026‑2176094 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |