Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 1,420,709 | +GA :: IS3 (+) +4 bp | 14.6% | intergenic (+21/‑9) | ynaK → / → ECB_01341 | conserved protein/hypothetical protein |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1420709 = | 60 (0.780) | 11 (0.120) | 10/44 | NT | 13.0% | intergenic (+21/‑12) | ynaK/ECB_01341 | conserved protein/hypothetical protein |
? | REL606 | = 1443893 | NA (NA) | noncoding (1255/1255 nt) | IS3 | repeat region | |||||
* | ? | REL606 | = 1420712 | 69 (0.810) | 11 (0.110) | 11/46 | NT | 12.2% | intergenic (+24/‑9) | ynaK/ECB_01341 | conserved protein/hypothetical protein |
? | REL606 | 1607918 = | NA (NA) | coding (15/1320 nt) | ECB_01510 | putative tail component of prophage |
TCGCAGCAATAAAAAAGGCCACCCGAAGGTAGCCtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1420742‑1420709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGATCCTACCCACGTAATATGGACACAGGCCTAAGC < REL606/1443893‑1443858 TCGCAGCAATAAAAAAGGCCACCCGAAGGTAGCCT < 1:10334803/35‑1 TCGCAGCAATAAAAAAGGCCACCCGAAGGTAGCCT > 1:16723613/1‑35 TCGCAGCAATAAAAAAGGCCACCCGAAGGTAGCCT < 1:777406/35‑1 TCGCAGCAATAAAAAAGGCCACCCGAAGGTAGCCT < 1:15246881/35‑1 TCGCAGCAATAAAAAAGGCCACCCGAAGGTAGCCT < 1:2303163/35‑1 CGCAGCAATAAAAAAGGCCACCCGAAGGTAGCCTG < 1:7326418/35‑1 CGCAGAAATAAAAAAGGCCACCCGAAGGTAGCCTN < 1:7947799/35‑1 GCAGCAATAAAAAAGGCCACCCGAAGGTAGCCTGA > 1:18539655/1‑35 GCAGCAATAAAAAAGGCCACCCGAAGGTAGCCTGA > 1:7127080/1‑35 GCAATAAAAAAGGCCACCCGAAGGTAGCCTGATCC < 1:14869056/35‑1 ATAAAAAAGGCCACCCGAAGGTAGCCTGATCCTAC < 1:10082081/35‑1 AAAAAGGCCACCCGAAGGTAGCCTGATCCTACCCA < 1:13378089/35‑1 AAAAGGCCCCCCGAAGGTAGCCTGATCCTACCCAC < 1:6506581/35‑1 AAAAGGCCACCCGAAGGTAGCCTGATCCTACCCAC > 1:4195193/1‑35 AAAGGCCCCCCGAAGGTAGCCTGATCCTACCCACG < 1:19310640/35‑1 GCCACCCGAAGGTAGCCTGATCCTACCCACGTAAT > 1:3548724/1‑35 CCACCCGAAGGTAGCCTGATCCTACCCACGTAATA < 1:3920792/35‑1 CCCGAAGGTAGCCTGATCCTACCCACGTAATATGG > 1:12725740/1‑35 CCCGAAGGTAGCCTGATCCTACCCACGTAATATGG > 1:19998679/1‑35 CCGAAGGTAGCCTGATCCTACCCACGTAATATGGA > 1:8243402/1‑35 AAGGTAGCCTGATCCTACCCACGTAATATGGACAC > 1:16358749/1‑35 nTGATCCTACCCACGTAATATGGACACAGGCCTAA > 1:1843248/2‑35 CTGATCCTACCCGCGTAATATGGACACAGGCCTAA < 1:846702/35‑1 CTGATCCTACCCACGTAATATGGACACAGGCCTAA < 1:3657377/35‑1 CTGATCCTACCCACGTAATATGGACACAGGCCTAA > 1:3249249/1‑35 CTGATCCTACCCACGTAATATGGACACAGGCCTAA > 1:270751/1‑35 CTGATCCTACCCACGTAATATGGACACAGGCCTAA > 1:4997309/1‑35 CTGATCCTACCCACGTAATATGGACACAGGCCTAA > 1:2099639/1‑35 CTGATCCTACCCACGTAATATGGACACAGGCCTAA > 1:9492621/1‑35 CTGATCCTACCCACGTAATATGGACACAGGCCTAA > 1:10688580/1‑35 CTGATCCTACCCACGTAATATGGACACAGGCCTAA < 1:16785604/35‑1 CTGATCCTACCCACGTAATATGGACACAGGCCTAA < 1:14446718/35‑1 TGATCCTACCCACGTAATATGGACACAGGCCTAAG > 1:14255265/1‑35 TGATCCTACCCACGTAATATGGACACAGGCCTAAG < 1:5392390/35‑1 TGATCCTACCCACGTAATATGGACACAGGCCTAAG < 1:5507841/35‑1 TGATCCTACCCACGTAATATGGACACAGGCCTAAG < 1:5891223/35‑1 TGATCCTACCCACGTAATATGGACACAGGCCTAAG < 1:2841123/35‑1 TGATCCTACCCACGTAATATGGACACAGGCCTAAG > 1:13861848/1‑35 TGATCCTACCCACGTAATATGGACACAGGCCTAAG > 1:14960661/1‑35 TGATCCTACCCACGTAATATGGACACAGGCCTAAG > 1:20523907/1‑35 TGATCCTACCCACGTAATATGGACACAGGCCTAAG > 1:15890668/1‑35 TGATCCTACCCACGTAATATGGACACAGGCCTAAG > 1:11723888/1‑35 TGATCCTACCCACGTAATATGGACACAGGCCTAAG < 1:11002238/35‑1 TGATCCTACCCACGTAATATGGACACAGGCCTAAG > 1:19599286/1‑35 TGATCCTACCCACGTAATATGGACACAGGCCTAAG > 1:19199398/1‑35 TGATCCTACCCACGTAATATGGACACAGGCCTAAG > 1:8625241/1‑35 TGATCCTACCCACGTAATATGGACACAGGCCTAAG < 1:18522724/35‑1 GATCCTACCCACGTAATATGGACACAGGTCTAAGC > 1:4179088/1‑35 GATCCTACCCACGTAATATGGACACAGGCCTACGC > 1:4263355/1‑35 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:11798652/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:1364721/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:6379146/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC > 1:10886969/1‑35 GATCCTACCCACGTAATATGGACACAGGCCTAAGC > 1:10781133/1‑35 GATCCTACCCACGTAATATGGACACAGGCCTAAGC > 1:14201708/1‑35 GATCCTACCCACGTAATATGGACACAGGCCTAAGC > 1:4760026/1‑35 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:14206982/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:3580950/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:14480682/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:3489920/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:14578057/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:14743777/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:14930065/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:20331146/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:2028011/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:19845567/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC > 1:197837/1‑35 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:19323859/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:16040275/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:18606991/35‑1 GATCCTACCCACGTAATATGGACACAGGCCTAAGC < 1:17907441/35‑1 TCGCAGCAATAAAAAAGGCCACCCGAAGGTAGCCtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1420742‑1420709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGATCCTACCCACGTAATATGGACACAGGCCTAAGC < REL606/1443893‑1443858 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |