New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2556110 = | 67 (0.650) | 14 (0.170) | 5/38 | NT | 14.7% | coding (1060/1371 nt) | xseA | exodeoxyribonuclease VII large subunit |
? | REL606 | 3882315 = | 110 (1.350) | coding (103/816 nt) | atpB | F0F1 ATP synthase subunit A |
Only 100 of 126 total aligned reads displayed.
GCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCA > REL606/2556076‑2556144 | gcGGTTAACCCAGCGGCTGAATCAGCAAAATCcac < 1:19631601/35‑1 (MQ=255) cGGTTAACCCAGCGGCTGAATCAGCAAAATCcaca < 1:13296677/35‑1 (MQ=255) cGGTTAACACAGCGGCTGGATCAGCAAAAACcaca > 1:4731915/1‑35 (MQ=25) cGGTTAACACAGCGGCTGAATCAGCAAAATCcaca > 1:3740146/1‑35 (MQ=255) cGGTTAACACAGCGGCTGAATCAGCAAAATCcaca > 1:412969/1‑35 (MQ=255) ggTTAACCCAGCGGCTGAATCAGCAAAATCCACAg < 1:6922713/35‑1 (MQ=255) ggTCAACCCAGCGGCTGAATCAGCAAAATCCACAg < 1:14139591/35‑1 (MQ=37) gTTAACACAGCGGCTGAATCAGCAAAATCCACAGc > 1:6277156/1‑35 (MQ=255) gTTAACACAGCGGCTGAATCAGCAAAATCCACAGc > 1:13471686/1‑35 (MQ=255) ttAACACAGCGGCTGAATCAGCAAAATCCACAGcc > 1:9667868/1‑35 (MQ=255) tAACACAGCGGCTGAATCAGCAAAATCCACAGCCg > 1:2759442/1‑35 (MQ=255) ccccaGCGGCTGAATCAGCAAAATCCACACCAGaa < 1:14712269/32‑1 (MQ=25) acacAGCGGCTGAATCAGCAAAATCCACAGCCGaa > 1:7714907/1‑35 (MQ=255) acacAGCGGCTGAATCAGCAAAATCCACAGCCGaa > 1:17920002/1‑35 (MQ=255) acacAGCGGCTGAATCAGCAAAATCCACAGCCGaa > 1:15745423/1‑35 (MQ=255) cacaGCGGCTTAATCAGCAAAATCCACAGCCGAAg > 1:17567305/1‑35 (MQ=255) acaGCGGCTTAATCAGCAAAATCCACAGCCGAAGa > 1:10786429/1‑35 (MQ=255) cGGCTGAATCAGCAAAATCCACAGCCGAAGATTCa > 1:12768780/1‑35 (MQ=255) ggCTGAATCAGCAAAATCCACAGCCGAAGATTCAt > 1:15058719/1‑35 (MQ=255) gCTGAATCAGCAAAATCCACAGCCGAAGATTCATc > 1:453267/1‑35 (MQ=255) gCTGAATCAGCAAAATCCACAGCCGAAGATTCATc > 1:15332852/1‑35 (MQ=255) gCTGAATCAGCAAAATCCACAGCCGAAGATTCATc > 1:8400530/1‑35 (MQ=255) gCTGAATCAGCAAAATCCACAGCCGAAGATTCATc > 1:3113148/1‑35 (MQ=255) cTGAATCAGCAAAATCCACAGCCGAAGATTCATcg > 1:6495921/1‑35 (MQ=255) cTGAATCAGCAAAATCCACAGCCGAAGATTCATcg > 1:13380713/1‑35 (MQ=255) tGAATCAGCAAAATCCACAGCCGAAGATTCATcgc > 1:448817/1‑35 (MQ=255) tGAATCAGCAAAATCCACAGCCGAAGATTCATcgc > 1:16014782/1‑35 (MQ=255) tGAATCAGCAAAATCCACAGCCGAAGATTCATcgc > 1:7495189/1‑35 (MQ=255) tGAATCAGCAAAATCCACAGCCGAAGATTCATcgc > 1:7748535/1‑35 (MQ=255) tGAATCAGCAAAATCCACAGCCGAAGATTCATcgc > 1:14168081/1‑35 (MQ=255) tGAATCAGCAAAATCCACAGCCGAAGATTCATcgc > 1:8378814/1‑35 (MQ=255) tGAATCAGCAAAATCCACAGCAGAAGATTCATcgc < 1:20571087/35‑1 (MQ=255) gAATCAGCAAAATCCACAGCCGAAGATTCATcgcg > 1:16865599/1‑35 (MQ=255) gAATCAGCAAAATCCACAGCCGAAGATTCATcgcg > 1:7727302/1‑35 (MQ=255) aaTCATCAAAATCCACAGCCGAAGATTCATcgcgc > 1:1741142/1‑35 (MQ=255) aaTCAGCAAAATCCACAGCCGAAGATTCATcgcgc > 1:17282225/1‑35 (MQ=255) aaTCAGCAAAATCCACAGCCGAAGATTCATcgcgc > 1:1126267/1‑35 (MQ=255) aaTCAGCAAAATCCACAGCCGAAGATTCATcgcgc > 1:3027974/1‑35 (MQ=255) aTCAGCAAAATCCACAGCCGAAGATTCATcgcgcg > 1:4465078/1‑35 (MQ=255) aTCAGCAAAATCCACAGCCGAAGATTCATcgcgcg > 1:14524976/1‑35 (MQ=255) tCAGCAAAATCCACAGCCGAAGATTCATCgcgcgc > 1:9529711/1‑35 (MQ=255) tCAGCAAAATCCACAGCCGAAGATTCATCgcgcgc > 1:7238969/1‑35 (MQ=255) tCAGCAAAATCCACAGCCGAAGATTCATCgcgcgc > 1:2030862/1‑35 (MQ=255) acaaaaaacccccCAGCCGAAGATTCATCgcgcgc > 1:17362586‑M1/14‑35 (MQ=255) cAGCAAAATCCACAGCCGAAGATTCATCGCGCGCa > 1:3711534/1‑35 (MQ=255) agcaaaacccccCAGCCGAAGATTCATCGCGCGCa > 1:13651604‑M1/13‑35 (MQ=255) acaaaacccccCAGCCGAAGATTCATCGCGCGCaa > 1:10147043‑M1/12‑35 (MQ=255) aaaaaacccccCAGCCGAAGATTCATCGCGCGCaa > 1:5852907‑M1/12‑35 (MQ=255) aGCAACATCCACAGCCGAAGATTCATCGCGCGCaa > 1:8937535/1‑35 (MQ=255) aGCAAAATCCACAGCCGAAGATTCATCGCGCGCaa > 1:20517383/1‑35 (MQ=255) aGCAAAATCCACAGCCGAAGATTCATCGCGCGCaa > 1:3010283/1‑35 (MQ=255) aGCAAAATCCACAGCCGAAGATTCATCGCGCGCaa > 1:1042504/1‑35 (MQ=255) aGCAAAATCCACAGCCGAAGATTCATCGCGCGCaa > 1:8321504/1‑35 (MQ=255) aGCAAAATCCACAGCCGAAGATTCATCGCGCGCaa > 1:12458786/1‑35 (MQ=255) aGCAAAATCCACAGCCGAAGATTCATCGCGCGCaa > 1:4202852/1‑35 (MQ=255) caaaacccccCAGCCGAAGATTCATCGCGCGCaaa > 1:9339605‑M1/11‑35 (MQ=255) acaaacccccCAGCCGAAGATTCATCGCGCGCaaa > 1:19018073‑M1/11‑35 (MQ=255) aaaaccccccCAGCCGAAGATTCATCGCGCGCaaa > 1:3633733‑M1/11‑35 (MQ=255) cAAAATCCACAGCCGAAGATTCATCGCGCGCAAAc > 1:1604550/1‑35 (MQ=255) aaaccccccCAGCCGAAGATTCATCGCGCGCAAAc > 1:14820217‑M1/10‑35 (MQ=255) aaaacccccCAGCCGAAGATTCATCGCGCGCAAAc > 1:15434364‑M1/10‑35 (MQ=255) aaaaaccccCAGCCGAAGATTCATCGCGCGCAAAc > 1:584004‑M1/10‑35 (MQ=255) aaaaTCCACAGCCGAAGATTCATCGCGCGCAAAcg > 1:6755213/1‑35 (MQ=255) aaaaTCCACAGCCGAAGATTCATCGCGCGCAAAcg > 1:5840756/1‑35 (MQ=255) aaaaTCCACAGCCGAAGATTCATCGCGCGCAAAcg > 1:12469719/1‑35 (MQ=255) aaaaTCCACAGCCGAAGATTCATCGCGCGCAAAcg > 1:8985677/1‑35 (MQ=255) aaaaTCCACAGCCGAAGATTCATCGCGCGCAAAcg > 1:10216266/1‑35 (MQ=255) accccccCAGCCGAAGATTCATCGCGCGCAAAcgc > 1:4000037‑M1/8‑35 (MQ=255) aacccccCAGCCGAAGATTCATCGCGCGCAAAcgc > 1:14969844‑M1/8‑35 (MQ=255) aacccccCAGCCGAAGATTCATCACGCGCAAAcgc > 1:19934631‑M1/8‑35 (MQ=255) aaaTCCACAGCCGAAGATTCATCGCGCGCAAAcgc > 1:3577047/1‑35 (MQ=255) aaaTCCACAGCCGAAGATTCATCGCGCGCAAAcgc > 1:15689253/1‑35 (MQ=255) aaTCCACAGCCGAAGATTCATCGCTCGCAAAcgcg > 1:19251615/1‑35 (MQ=255) aaTCCACAGCCGAAGATTCATCGCGCGCAAAcgcg > 1:11654329/1‑35 (MQ=255) aaTCCACAGCCGAAGATTCATCGCGCGCAAAcgcg > 1:4295546/1‑35 (MQ=255) aaTCCACAGCCGAAGATTCATCGCGCGCAAAcgcg > 1:4131462/1‑35 (MQ=255) aaTCCACAGCCGAAGATTCATCGCGCGCAAAcgcg > 1:2615846/1‑35 (MQ=255) aaTCCACAGCCGAAGATTCATCGCGCGCAAAcgcg > 1:3837296/1‑35 (MQ=255) cccccCAGCCGAAGATTCATCGCGCGCAAACgcgc > 1:3342057‑M1/6‑35 (MQ=255) cccccCAGCCGAAGATTCATCGCGCGCAAACgcgc > 1:17367152‑M1/6‑35 (MQ=255) tCCACAGCCGAAGATTCATCGCGCGCAAACGCGCa > 1:2849546/1‑35 (MQ=255) cccCAGCCGAAGATTCATCGCGCGCAAACGCGCAt > 1:666022‑M1/4‑35 (MQ=255) cccCAGCCGAAGATTCATCGCGCGCAAACGCGCAt > 1:8563648‑M1/4‑35 (MQ=255) cccCAGCCGAAGATTCATCGCGCGCAAACGCGCAt > 1:5405107‑M1/4‑35 (MQ=255) ccACAGCCGAAGATTCATCTCGCGCAAACGCGCAt > 1:19584499/1‑35 (MQ=255) ccACAGCCGAAGATTCATCGCGCGCAAACGCGCAt > 1:11153898/1‑35 (MQ=255) ccACAGCCGAAGATTCATCGCGCGCAAACGCGCAt > 1:12110392/1‑35 (MQ=255) ccCAGCCGAAGATTCATCGCGCGCAAACGCGCAtt > 1:15460435‑M1/3‑35 (MQ=255) ccCAGCCGAAGATTCATCGCGCGCAAACGCGCAtt > 1:1128996‑M1/3‑35 (MQ=255) cacaGCCGAAGATTCATCGCGCGCAAACGCGCAtt > 1:17749040/1‑35 (MQ=255) cCAGCCGAAGATTCATCGCGCGCAAACGCGCATTc > 1:6208226‑M1/2‑35 (MQ=255) cCAGCCGAAGATTCATCGCGCGCAAACGCGCATTc > 1:5327898‑M1/2‑35 (MQ=255) cCAGCCGAAGATTCATCGCGCGCAAACGCGCATTc > 1:9634216‑M1/2‑35 (MQ=255) acaGCCGAAGATTCATCGCGCGCAAACGCGCATTc > 1:16847567/1‑35 (MQ=255) CAGCCGAAGATTCATCGCGCGCAAACGCGCATTCa > 1:7039656‑M1/1‑35 (MQ=255) CAGCCGAAGATTCATCGCGCGCAAACGCGCATTCa > 1:18707178‑M1/1‑35 (MQ=255) CAGCCGAAGATTCATCGCGCGCAAACGCGCATTCa > 1:14641322‑M1/1‑35 (MQ=255) CAGCCGAAGATTCATCGCGCGCAAACGCGCATTCa < 1:9237465‑M1/35‑1 (MQ=255) CAGCCGAAGATTCATCGCGCGCAAACGCGCATTCa < 1:16715338‑M1/35‑1 (MQ=255) CAGCCGAAGATTCATCGCGCGCAAACGCGCATTCa < 1:4917651‑M1/35‑1 (MQ=255) | GCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCA > REL606/2556076‑2556144 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |