New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3411408 = | 52 (0.510) | 21 (0.310) | 4/32 | NT | 37.7% | coding (302/1023 nt) | yheT | predicted hydrolase |
? | REL606 | 3433812 = | NA (NA) | noncoding (418/768 nt) | IS1 | repeat region |
Only 100 of 1046 total aligned reads displayed.
GCCCACGGTCTGGTTGAGGCGGCGCAAAAGCGCGGCTGGCTGGGCGTGGTGATGCATTTTCGCGGATGC > REL606/3411374‑3411442 | gCCCACGGTCTGGTTGAGGCGGCGCAAAAGCGCgg < 1:914635/35‑1 (MQ=255) cagtggggctatgtctgggctaaatcgcgccagcg < 1:4109429‑M1/1‑1 (MQ=255) cagtggggctatgtcggggctaaatcgcgcccgcg < 1:3894076‑M1/1‑1 (MQ=255) cagtggggctatgtcggggctaaatcgcgcccgcg < 1:6304791‑M1/1‑1 (MQ=255) cagtggggctatgtcggggctaaatcgcgccagcg < 1:16837220‑M1/1‑1 (MQ=255) cagtggggctatgtcggggctaaatcgcgccagcg > 1:8723446‑M1/35‑35 (MQ=255) cagtggggctatgtcggggctaaatcgcgccagcg < 1:13306201‑M1/1‑1 (MQ=255) cagtggggctatgtcggggctaaatcgcgccagcg > 1:12798196‑M1/35‑35 (MQ=255) cagtggggctatgtcggggctaaatcgcgccagcg > 1:5908595‑M1/35‑35 (MQ=255) cagtggggctatgtcggggctaaatcgcgccagcg > 1:10004200‑M1/35‑35 (MQ=255) cagtggggctatgtcggggctaaatcgcgccagcg < 1:1098257‑M1/1‑1 (MQ=255) agtggggctatgtcggggctaaatcgcgccagcgc > 1:16411454‑M1/34‑35 (MQ=255) agtggggctatgtcggggctaaatcgcgccagcgc > 1:17046916‑M1/34‑35 (MQ=255) agtggggctatgtcggggctaaatcgcgccagcgc > 1:11903040‑M1/34‑35 (MQ=255) agtggggctatgtcggggctaaatcgcgccagcgc < 1:1151208‑M1/2‑1 (MQ=255) agtggggctatgtcggggctaaatcgccccagcgc < 1:16557691‑M1/2‑1 (MQ=255) gtggggctatgtcggggctaaatcgcgccagcgct > 1:12254333‑M1/33‑35 (MQ=255) gtggggctatgtcggggctaaatcgcgccagcgct > 1:2663871‑M1/33‑35 (MQ=255) gtggggctatgtcggggctaaatcgcgccagcgct > 1:3002528‑M1/33‑35 (MQ=255) gtggggctatgtcggggctaaatcgcgccagcgct < 1:15549799‑M1/3‑1 (MQ=255) gtggggctatgtaggggctaaatcgcgccagcgct > 1:10190832‑M1/33‑35 (MQ=255) tgggtctatgtcggggctaaatcgcgccagcgctg > 1:18275259‑M1/32‑35 (MQ=255) tggggctatgtcggggctaaatcgcgccagcgctg > 1:20393844‑M1/32‑35 (MQ=255) tggggctatgtcggggctaaatcgcgccagcgctg > 1:2140410‑M1/32‑35 (MQ=255) tggggctatgtcggggctaaatcgcgccagcgctg > 1:248323‑M1/32‑35 (MQ=255) tggggctatgtcggggctaaatcgcgccagcgctg > 1:17681700‑M1/32‑35 (MQ=255) tggggctatgtcggggctaaatcgcgccagcgctg > 1:7780359‑M1/32‑35 (MQ=255) tggggctatgtcggggctaaatcgcgccagcgctg > 1:7485055‑M1/32‑35 (MQ=255) tggggctatgtcggggctaaatcgcgacagcgctg > 1:8240268‑M1/32‑35 (MQ=255) cgcGGTCTGGTTGAGGCGGCGCAAAAGCGCggctg < 1:2825425/33‑1 (MQ=255) cACGGTCTGGTTGATGCGGCGCAAAAGCGCggctg > 1:18496835/1‑35 (MQ=255) cACGGTCTGGTTGAGGCGGCGCAAAAGCGCggctg < 1:461920/35‑1 (MQ=255) gggtctatgtcggggctaaatcgcgccagcgctgg < 1:16017119‑M1/5‑1 (MQ=255) ggggctatgtcggggctaaatcgcgcccgcgctgg < 1:6050360‑M1/5‑1 (MQ=255) ggggctatgtcggggctaaatcgcgcccgcgctgg < 1:14382933‑M1/5‑1 (MQ=255) ggggctatgtcggggctaaatcgcgccagcgctgg > 1:7970008‑M1/31‑35 (MQ=255) ggggctatgtcggggctaaatcgcgccagcgctgg > 1:5070655‑M1/31‑35 (MQ=255) ggggctatgtcggggctaaatcgcgccagcgctgg > 1:11112066‑M1/31‑35 (MQ=255) ggggctatgtcggggctaaatcgcgccagcgctgg > 1:6436149‑M1/31‑35 (MQ=255) ggggctatgtcggggctaaatcgcgccagcgctgg > 1:13201652‑M1/31‑35 (MQ=255) ggggctatgtcggggctaaatcgcgccagcgctgg > 1:9306510‑M1/31‑35 (MQ=255) ggggctatgtcggggctaaatcgcgccagcgctgg > 1:13802233‑M1/31‑35 (MQ=255) ggggctatgtcggggctaaatcgcgccagcgctgg > 1:10535301‑M1/31‑35 (MQ=255) ggggctatgtcggggctaaatcgcgccagcgctgg > 1:12119862‑M1/31‑35 (MQ=255) gggctatgtcggggctaaatcgcgccagcgctggc > 1:19371541‑M1/30‑35 (MQ=255) gggctatgtcggggctaaatcgcgccagcgctggc > 1:12415929‑M1/30‑35 (MQ=255) gggctatgtcggggctaaatcgcgccagcgctggc > 1:5682332‑M1/30‑35 (MQ=255) gggctatgtcggggctaaatcgcgccagcgctggc > 1:19219057‑M1/30‑35 (MQ=255) gggctatgtcggggctaaatcgcgccagcgctggc > 1:14001160‑M1/30‑35 (MQ=255) gggctatgtcggggctaaatcgcgccagcgctggc < 1:3472648‑M1/6‑1 (MQ=255) gggctatgtcggggctaaatcgcgccagcgctggc > 1:15802256‑M1/30‑35 (MQ=255) gggctatgtcggggctaaatcgcgccagcgctggc < 1:3708031‑M1/6‑1 (MQ=255) gggctatgtcggggctaaaacgcgccagcgctggc < 1:17428719‑M1/6‑1 (MQ=255) cGGTCTGGTTGAGGCGGCGCAAAAGCGCggctggc > 1:14190978/1‑35 (MQ=255) ggctatgtcggggctaaatcgcgccagcgctggct > 1:6191252‑M1/29‑35 (MQ=255) ggctatgtcggggctaaatcgcgccagcgctggct > 1:4758613‑M1/29‑35 (MQ=255) ggctatgtcggggctaaatcgcgccagcgctggct > 1:4288974‑M1/29‑35 (MQ=255) ggctatgtcggggctaaatcgcgccagcgctggct > 1:1468694‑M1/29‑35 (MQ=255) ggctatgtcggggctaaatcgcgccagcgctggct > 1:16169386‑M1/29‑35 (MQ=255) ggctatgtcggggctaaatcgcgccagcgctggct > 1:7639254‑M1/29‑35 (MQ=255) ggTCTGGTTGAGGCGGCGCAAAAGCGCggctggct < 1:10668642/35‑1 (MQ=255) gctatgtcggggctaaatcgcgcccgcgctggctg < 1:15407499‑M1/8‑1 (MQ=255) gctatgtcggggctaaatcgcgcccgcgctggctg < 1:1508652‑M1/8‑1 (MQ=255) gctatgtcggggctaaatcgcgccagcgctggctg > 1:17290656‑M1/28‑35 (MQ=255) gctatgtcggggctaaatcgcgccagcgctggctg > 1:858666‑M1/28‑35 (MQ=255) gctatgtcggggctaaatcgcgccagcgctggctg < 1:658364‑M1/8‑1 (MQ=255) gctatgtcggggctaaatcgcgccagcgctggctg < 1:11311921‑M1/8‑1 (MQ=255) gctatgtcggggctaaatcgcgccagcgctggctg > 1:555339‑M1/28‑35 (MQ=255) gctatgtcggggctaaatcgcgccagcgctggctg > 1:1174390‑M1/28‑35 (MQ=255) ctatgtcggggctaaatcgcgcccgcGctggctgg < 1:20152272‑M1/9‑1 (MQ=255) ctatgtcggggctaaatcgcgccagcGctggctgg < 1:13020457‑M1/9‑1 (MQ=255) ctatgtcggggctaaatcgcgccagcGctggctgg < 1:19497918‑M1/9‑1 (MQ=255) ctatgtcggggctaaatcgcgccagcGctggctgg < 1:4437632‑M1/9‑1 (MQ=255) ctatgtcggggctaaatcgcgccagcGctggctgg < 1:6896608‑M1/9‑1 (MQ=255) ctatgtcggggctaaatcgcgccagcGctggctgg < 1:8411285‑M1/9‑1 (MQ=255) tatgtcggggctaaatcgcgcccgcGCTGGCTggg < 1:1869940‑M1/10‑1 (MQ=255) tatgtcggggctaaatcgcgcccgcGCTGGCTggg < 1:10316838‑M1/10‑1 (MQ=255) atgtcggggctaaatcgcgccagcGCTGGCtgggt < 1:9847370‑M1/11‑2 (MQ=255) atgtcggggctaaatcgcgccagcGCTGGCtgggt < 1:4918500‑M1/11‑2 (MQ=255) atgtcggggctaaatcgcgccagcGCTGGCtgggg < 1:12609140‑M1/11‑2 (MQ=255) atgtcggggctaaatcgcgccagcGCTGGCtgggg < 1:9540862‑M1/11‑2 (MQ=255) atgtcggggctaaatcgcgccagcGCTGGCtgggg < 1:8119098‑M1/11‑2 (MQ=255) atgtcggggctaaatcgcgccagcGCTGGCtgggg < 1:19879899‑M1/11‑2 (MQ=255) atgtcggggctaaatcgcgccagcGCTGGCtgggg < 1:5351140‑M1/11‑2 (MQ=255) atgtcggggctaaatcgcgccagcGCTGGCtgggg < 1:7131678‑M1/11‑2 (MQ=255) atgtcggggctaaatcgcgccagcGCTGGCtgggg < 1:2287426‑M1/11‑2 (MQ=255) tgtcggggctaaatcgcgccagcGCTGGctggggt < 1:20332747‑M1/12‑3 (MQ=255) tgtcggggctaaatcgcgccagcGCTGGctggggt < 1:3224373‑M1/12‑3 (MQ=255) tgtcggggctaaatcgcgccagcGCTGGctggggg < 1:18980312‑M1/12‑3 (MQ=255) tgtcggggctaaatcgcgccagcGCTGGctggggg < 1:18123189‑M1/12‑3 (MQ=255) gtcggggctaaatcgcgccagcGCTGgctggggtt < 1:8899649‑M1/13‑4 (MQ=255) gtcggggctaaatcgcgccagcGCTGgctggggtg < 1:14988338‑M1/13‑4 (MQ=255) gtcggggctaaatcgcgccagcGCTGgctggggtg < 1:16737166‑M1/13‑4 (MQ=255) gtcggggctaaatcgcgccagcGCTGgctggggtg < 1:17967037‑M1/13‑4 (MQ=255) gtcggggctaaatcgcgccagcGCTGgctgggggg < 1:15270471‑M1/13‑4 (MQ=255) gtcggggctaaatcgcgccagcGCTGgctgggggg < 1:9032668‑M1/13‑4 (MQ=255) gtcggggctaaatcgcgccagcGCTGgctgggggg < 1:1968906‑M1/13‑4 (MQ=255) gAGGCGGCGCAAAAGCTCGGCTGGGGGGGCggggg > 1:9756466/1‑34 (MQ=16) gcgcAAAAGCGCGGCTGGCTGGGCGTGGTGATGCa < 1:13550990/35‑1 (MQ=255) ggctggctGGGCGTGGTGATGCATTTTCGCGGATg > 1:7429696/1‑35 (MQ=255) | GCCCACGGTCTGGTTGAGGCGGCGCAAAAGCGCGGCTGGCTGGGCGTGGTGATGCATTTTCGCGGATGC > REL606/3411374‑3411442 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |