New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 924276 = | 93 (0.910) | 10 (0.100) | 3/46 | NT | 12.3% | coding (714/1431 nt) | ybjT | conserved protein with NAD(P)‑binding Rossmann‑fold domain |
? | REL606 | = 1365457 | 53 (0.540) | coding (824/978 nt) | pspF | DNA‑binding transcriptional activator |
GTAAGCGCCGCTGGTTGATCCCCATCCCCCTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/924310‑924276 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTGCCGCTGGATTTACGTGAGTTTCAGATGCAGCA < REL606/1365457‑1365424 GTAAGCGCCGCTGGTTGATCCCCATCCCCCTCCCC > 1:19633346/1‑35 GTAAGCGCCGCTGGTTGATCCCCATCCCCCTCCCC < 1:4914665/35‑1 GTAAGCGCCGCTGGTTGATCCCCATCCCCCTCCCC > 1:1588350/1‑35 GTAAGCGCCGCTGGTTGATCCCCATCCCCCTCCCC > 1:16012349/1‑35 CCCCCCCCCCTGCCGCTGGATTTACGTGAGTTTCA < 1:6868658/35‑1 CCCCCCCCCCTGCCGCTGGATTTACGTGAGTTTCA < 1:13459544/35‑1 CCCCCACCCCTGCCGCTGGATTTACGTGAGTTTCA < 1:5440217/35‑1 CCCCCCCCCTGCCGCTGGATTTACGTGAGTTTCAG < 1:1292494/35‑1 CCCCCCCCCTGCCGCTGGATTTACGTGAGTTTCAG < 1:14561847/35‑1 CCCCCCCCTGCCGCTGGATTTACGTGAGTTTCAGA < 1:11728680/35‑1 CCCCCCCCTGCCGCTGGATTTACGTGAGTTTCAGA < 1:13058951/35‑1 CCCCCCCCTGCCGCTGGATTTACGTGAGTTTCAGA < 1:19073614/35‑1 CCCCCCCCTGCCGCTGGATTTACGTGAGTTTCAGA < 1:4453917/35‑1 CCCACCCCTGCCGCTGGATTTACGTGAGTTTCAGA < 1:16147306/35‑1 cccCCCCTGCCGCTGGATTTACGTGAGTTTCAGAT < 1:2650634/32‑1 cccCCCCTGCCGCTGGATTTACGTGAGTTTCAGAT < 1:3821133/32‑1 cccCCCCTGCCGCTGGATTTACGTGAGTTTCAGAT < 1:14119579/32‑1 cacCCCCTGCCGCTGGATTTACGTGAGTTTCAGAT < 1:14353894/32‑1 ccCCCCTGCCGCTGGATTTACGTGAGTTTCAGATG < 1:8147442/33‑1 cCCCCTGCCGCTGGATTTACGTGAGTTTCAGATGC < 1:2511394/34‑1 cCCCCTGCCGCTGGATTTACGTGAGTTTCAGATGC < 1:4379610/34‑1 cCCCCTGCCGCTGGATTTACGTGAGTTTCAGATGC < 1:6607796/34‑1 CCCCTGCCGCTGGATTTACGTGAGTTTCAGATGta < 1:4813469/35‑3 CCCCCGCCGCTGGATTTACGTGAGTTTCAGATGCA < 1:1329955/35‑1 CCCTGCCGCTGGATTTACGTGAGTTTCAGATGCAN < 1:5885744/35‑1 CCCTGCCGCTGGATTTACGTGAGTTTCAGATGCAG < 1:4242041/35‑1 CCTGCCGCTGGATTTACGTGAGTTTCAGATGCAGC < 1:16704328/35‑1 CCTGCCGCTGGATTTACGTGAGTTTCAGATGCAGC < 1:10567469/35‑1 CTGCCGCTTGATTTACGTGAGTTTCAGATGCAGCA > 1:17865781/1‑35 CTGCCGCTGGATTTACGTGAGTTTCAGATGCAGCA > 1:2105873/1‑35 CTGCCGCTGGATTTACGTGAGTTTCAGATGCAGCA > 1:14795874/1‑35 CTGCCGCTGGATTTACGTGAGTTTCAGATGCAGCA > 1:6517882/1‑35 CTGCCGCTGGATTTACGTGAGTTTCAGATGCAGCA > 1:11181858/1‑35 GTAAGCGCCGCTGGTTGATCCCCATCCCCCTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/924310‑924276 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTGCCGCTGGATTTACGTGAGTTTCAGATGCAGCA < REL606/1365457‑1365424 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |