New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1095862 = | 53 (0.520) | 3 (0.050) | 3/28 | NT | 10.4% | coding (274/1509 nt) | putP | proline:sodium symporter |
? | REL606 | 1585457 = | 21 (0.350) | coding (495/666 nt) | marC | predicted transporter |
TTATTGTTGTATTCGGTATGCACACGCAACCGCCCCGCCACCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1095905‑1095862 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccaccagGAAAAAGATCAGCGGCGGCGCAACCATCAGTACC > REL606/1585457‑1585490 TTATTGTTGTATTCGGTATGCACACGCAACCGCCC > 1:15739305/1‑35 TTATTGTTGTATTCGGTATGCACACGCAACCGCCC > 1:13395026/1‑35 TTATTGTTGTATTCGGTATGCACACGCAACCGCCC > 1:7591096/1‑35 TTATTGTTGTATTCGGTATGCACACGCAACCGCCC > 1:14395316/1‑35 TATTGTTGTATTCGGTATGCACACGCAACCGCCCC > 1:7646030/1‑35 ATTGTTGTATTCGGTATGCACACGCAACCGCCCCG > 1:2579711/1‑35 ATTGTTGTATTCGGTATGCACACGCAACCGCCCCG > 1:4852982/1‑35 ATTGTTGTATTCGGTATGCACACGCAACCGCCCCG > 1:13510587/1‑35 TTGTTGTATTCGGTATGCACACGCAACCGCCCCGC > 1:10502832/1‑35 TTGTTGTATTCGGTATGCACACGCAACCGCCCCGC > 1:4956228/1‑35 TGTTGTATTCGGTATGCACACGCAACCGCCCCGCC > 1:2436227/1‑35 TGTTGTATTCGGTATGCACACGCAACCGCCCCGCC > 1:8452830/1‑35 TGTTGTATTCGGTATGCACACGCAACCGCCCCGCC > 1:10979692/1‑35 GTTGTATTCGGTATGCACACGCAACCGCCCCGCCA > 1:17079848/1‑35 GTTGTATTCGGTATGCACACGCAACCGCCCCGCCA > 1:18462000/1‑35 TTGTATTCGTTATGCACACGCAACCGCCCCGCCAC > 1:14541158/1‑35 GTATTCGGTATGCACACGCAACCGCCCCGCCACCA > 1:5954389/1‑35 GTATTCGGTATGCACACGCAACCGCCCCGCCACCA > 1:14680159/1‑35 GTATTCGGTATGCACACGCAACCGCCCCGCCACCA > 1:18890363/1‑35 CAACCCCCCCGCCACCAGGAAAAAGATCAGCGGCG < 1:4683427/35‑1 AACCCCCCCGCCACCAGGAAAAAGATCAGCGGCGG < 1:7920503/35‑1 ACCCCCCCGCCACCAGGAAAAAGATCAGCGGCGGC < 1:8492430/35‑1 cccCCCCGCCACCAGGAAAAAGATCAGCGGCGGCG < 1:8565600/32‑1 accCCCCGCCACCAGGAAAAAGATCAGCGGCGGCG < 1:2207295/32‑1 ccCCCCGCCACCAGGAAAAAGATCAGCGGCGGCGC < 1:303035/33‑1 ccCCCCGCCACCAGGAAAAAGATCAGCGGCGGCGC < 1:4393222/33‑1 CCCCGCCACCAGGAAAAAGATCAGCGGCGGCGCAA < 1:14390364/35‑1 CCCGCCACCAGGAAAAAGATCAGCGGCGGCGCAAC < 1:10089573/35‑1 CGCCACCAGGAAAAAGATCAGCGGCGGCGCAGCCA < 1:20301505/35‑1 CGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCA < 1:14405645/35‑1 CGCCACCAGGAAAAAGATCAGCGGCGGCGAAACCA < 1:13096617/35‑1 GCCACCAGGAAAAGGATCAGCGGCGGCGCAACCAT < 1:1235556/35‑1 GCCACCAGGAAAAAGATCAGCGGCGGCGCAACCAT < 1:14666411/35‑1 GCCACCAGGAAAAAGATCAGCGGCGGCGCAACCAT < 1:14051809/35‑1 CCAGGAAAAAGATCAGCGGCGGCGCAGCCATCAGT < 1:16332014/35‑1 CAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTA < 1:12950621/35‑1 GGAAAAAGATCAGCGGCGGCGCAACCATCAGTACC < 1:14201917/35‑1 TTATTGTTGTATTCGGTATGCACACGCAACCGCCCCGCCACCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1095905‑1095862 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccaccagGAAAAAGATCAGCGGCGGCGCAACCATCAGTACC > REL606/1585457‑1585490 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |