New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3182813 = | 111 (1.080) | 7 (0.110) | 3/30 | NT | 10.7% | coding (97/405 nt) | yqjE | conserved inner membrane protein |
? | REL606 | 4217451 = | 48 (0.750) | coding (886/2097 nt) | yjbH | predicted porin |
Only 100 of 144 total aligned reads displayed.
TAACGCCCGCCCGCAATATCAACCGCAGCCGCAGGATGCCATTTTGCAGCATTCGGTGGTGGCGAATCA > REL606/4217417‑4217485 | tAACGCCCGCCAGCAATATCAACCGCAGCCGCAgg > 1:899510/1‑35 (MQ=255) aaCGCCCGCCCGCAATATCAACCGCAGCCGCAGGa > 1:492845/1‑35 (MQ=255) aCGCCCGCCCGCAATATCAACCGCAGCCGCAGGAt > 1:7457642/1‑35 (MQ=255) aCGCCCGCCCGCAATATCAACCGCAGCCGCAGGAt > 1:12584382/1‑35 (MQ=255) aCGCCCGCCCGCAATATCAACCGCAGCCGCAGGAt > 1:12319755/1‑35 (MQ=255) gcccgcccGCAATATCAACCGCAGCCGCAGGATGc > 1:549055/1‑35 (MQ=255) gcccgcccGCAATATCAACCGCAGCCGCAGGATGc > 1:6256652/1‑35 (MQ=255) gcccgcccGCAATATCAACCGCAGCCGCAGGATGc > 1:922865/1‑35 (MQ=255) ccccccccaCAATATCACCCGCAGCCGCAGGATGc < 1:18149846/34‑1 (MQ=25) cccgcccgCAATATCAACCGCAGCCGCAGGATGcc > 1:10147479/1‑35 (MQ=255) cccccccgCAATACCACCCGCAGCCGCAGGATGcc < 1:19145899/35‑1 (MQ=18) ccgcccgcTATATCAACCGCAGCCGCAGGATGCCa > 1:17259842/1‑35 (MQ=255) ccgcccgcAATATCAACCGCAGCCGCAGGATGCCa > 1:17556023/1‑35 (MQ=255) gcccgcAATATCAACCGCAGCCGCAGGATGCCCtt > 1:164485/1‑35 (MQ=255) gcccgcAATATCAACCGCAGCCGCAGGATGCCAtt > 1:14716240/1‑35 (MQ=255) ccccgcAATATCAACCGCAGCCGCAGGATGTCAtt > 1:1788865/2‑35 (MQ=255) cccgcAATATCAACCGCAGCCGCAGGATGCCAttt > 1:1190467/1‑35 (MQ=255) ccgcAATATCAACCGCAGCCGCAGGATGCCAtttt > 1:8445234/1‑35 (MQ=255) ccgcAATATCAACCGCAGCCGCAGGATGCCAtttt > 1:13589321/1‑35 (MQ=255) ccgcAATATCAACCGCAGCCGCAGGATGCCAtttt > 1:14117143/1‑35 (MQ=255) ccgcAATACCACCCCCAGCCGCAGGGTGCCAtttt < 1:6347052/35‑1 (MQ=16) cgcAATATCAACCGCAGCCGCAGGATGCCATTTTg > 1:18980107/1‑35 (MQ=255) cgcAATATCAACCGCAGCCGCAGGATGCCATTTTg > 1:13729884/1‑35 (MQ=255) ccaaaTACCACCCGCAGCCGCAGGATGCCATTTTg < 1:16261657/32‑1 (MQ=18) cacAATACCACCCCCAGCCGCAGGATGCCATTTTg < 1:10143375/33‑1 (MQ=18) gcAATATCAACCGCAGCCGCAGGATGCCATTTTgc > 1:12163400/1‑35 (MQ=255) gcAATACCACCCGCAGCAGCAGGATGCCATTTTgc < 1:18904456/35‑1 (MQ=21) ccAATACCACCCCCAGCCGCAGGATGCCATTTTgc < 1:2885796/34‑1 (MQ=21) cAATATCAACCGCAGCCGCAGGATGCCCTTTTgca > 1:12738026/1‑35 (MQ=255) cAATATCAACCGCAGCCGCAGGATGCCATTTTgca > 1:9059519/1‑35 (MQ=255) cAATATCAACCGCAGCCGCAGGATGCCATTTTgca > 1:4910283/1‑35 (MQ=255) cAATACCACCCGCAGCCGCAGGATGCCATTTTgca < 1:17661039/35‑1 (MQ=21) aaTACCACCCGCAGCCGCAGGATGCCATTTTgaag < 1:10182118/35‑1 (MQ=18) tatCAACCGCAGCCGCAGGATGCCATTTTgcagca > 1:7058955/1‑35 (MQ=255) atCAACCGCAGCCGCAGGATGCCATTTTGCAGCAt > 1:18845857/1‑35 (MQ=255) atCAACCGCAGCCGCAGGATGCCATTTTGCAGCAt > 1:16609389/1‑35 (MQ=255) accacccccagccgcagGATGCCATTTTGCAGCAt < 1:15620863‑M2/18‑1 (MQ=255) accacccccagccgcagGATGCCATTTTGCAGCAt < 1:7869168‑M2/18‑1 (MQ=255) tCAACCGCAGCCGCAGGATGCCCTTTTGCAGCAtt > 1:18641411/1‑35 (MQ=255) tCAACCGCAGCCGCAGGATGCCATTTTGCAGCAtt > 1:515290/1‑35 (MQ=255) ccacccccagccgcagGATGCCATTTTGCAGCAtt < 1:6813745‑M2/19‑1 (MQ=255) ccacccccagccgcagGATGCCATTTTGCAGCAtt < 1:15772595‑M2/19‑1 (MQ=255) cacccccagccgcagGATGCCATTTTGCAGCATTc < 1:14111346‑M2/20‑1 (MQ=255) cAACCGCAGCCGCAGGATGCCATTTTGCAGCATTc > 1:15732635/1‑35 (MQ=255) aaCCGCAGCCGCAGGATGCCATTTTGCAGCATTCg > 1:9741082/1‑35 (MQ=255) aaCCGCAGCCGCAGGATGCCATTTTGCAGCATTCg > 1:20053817/1‑35 (MQ=255) aaCCGCAGCCGCAGGATGCCATTTTGCAGCATTCg > 1:17156371/1‑35 (MQ=255) aaCCGCAGCCGCAGGATGCCATTTTGCAGCATTCg > 1:1156879/1‑35 (MQ=255) aaCCGCAGCCGCAGGATGCCATTTTGCAGCATTCg > 1:15287312/1‑35 (MQ=255) aaCCGCAGCCGCAGGATGCCATTTTGCAGCATTCg > 1:12600944/1‑35 (MQ=255) aaCCGCAGCCGCAGGATGCCATTTTGCAGCATTCg > 1:12871188/1‑35 (MQ=255) aaCCGAAGCCGCAGGATGCCATTTTGCAGCATTCg < 1:5556656/35‑1 (MQ=255) cccgcagccgcagGATGCCATTTTGCAGCATTCgg < 1:11748350/34‑1 (MQ=255) cccccagccgcagGATGCCATTTTGCAGCATTCgg < 1:12304022‑M2/22‑1 (MQ=255) aCCGCAGCCGCAGGATGCCATTTTGCAGCATTCgg > 1:14729199/1‑35 (MQ=255) ccgcagccgcagGATGCCATTTTGCAGCATTCggt > 1:18387643/1‑35 (MQ=255) ccgcagccgcagGATGCCATTTTGCAGCATTCggt > 1:2527073/1‑35 (MQ=255) ccgcagccgcagGATGCCATTTTGCAGCATTCggt > 1:20365175/1‑35 (MQ=255) ccgcagccgcagGATGCCACTTTGCAGCATTCggt > 1:16372074/1‑35 (MQ=255) ccccagccgcagGATGCCATTTTGCAGCATTCggt < 1:16929797‑M2/23‑1 (MQ=255) ccccagccgcagGATGCCATTTTGCAGCATTCggt < 1:8258401‑M2/23‑1 (MQ=255) cgcagccgcagGATGCCATTTTGCAGCATTCggtg > 1:1039904/1‑35 (MQ=255) cccagccgcagGATGCCATTTTGCAGCATTCggtg < 1:15624186‑M2/24‑1 (MQ=255) cccagccgcagGATGCCATTTTGCAGCATTCggtg < 1:14814415‑M2/24‑1 (MQ=255) gcagccgcagGATGCCATTTTGCAGCATTCggtgg > 1:17053007/1‑35 (MQ=255) gcagccgcagGATGCCATTTTGCAGCATTCggtgg > 1:2560084/1‑35 (MQ=255) gcagcagcagGATGCCATTTTGAAGCATTCggtgg < 1:14531725/35‑1 (MQ=25) ccagccgcagGATGCCATTTTGCAGCATTCggtgg < 1:9519770‑M2/25‑1 (MQ=255) cagccgcagGATGCCATTTTGCAGCATTcggtggg > 1:4289825‑M2/10‑34 (MQ=255) cagccgcagGATGCCATTTTGCAGCATTCggtggt < 1:10772918‑M2/26‑1 (MQ=255) cagccgcagGATGCCATTTTGCAGCATTCggtggt > 1:12974149‑M2/10‑35 (MQ=255) agccgcagGATGCCATTTTGCAGCATtcggtgggg > 1:8984967‑M2/9‑33 (MQ=255) agccgcagGATGCCATTTTGCAGCATtcggtgggg > 1:2106277‑M2/9‑33 (MQ=255) agccgcagGATGCCATTTTGCAGCATTCGgtggtg < 1:14362088‑M2/27‑1 (MQ=255) gccgcagGATGCCATTTTGCAGCATTCGGtggtgg < 1:8767692‑M2/28‑1 (MQ=255) ccgcagGATGCCATTTTGCAGCATTGGGTGGTGGc < 1:5762364‑M2/29‑1 (MQ=255) ccgcagGATGCCATTTTGCAGCATTCGGTGGTGGc < 1:20008728‑M2/29‑1 (MQ=255) tgcagGATGCCATTTTGCAGCATTCGGtggggggg > 1:15595417/2‑33 (MQ=37) cgcagGATGCCATTTTGCAGCATTCGGtggggggg > 1:438283/1‑33 (MQ=38) cgcagGATGCCATTTTGCAGCATTCGGTGGTGGCg < 1:5356119‑M2/30‑1 (MQ=255) cgcagGATGCCATTTTGCAGCATTCGGTGGTGGCg > 1:7524933‑M2/6‑35 (MQ=255) cgcagGATGCCATTTTGCAGCATTCGGTGGGGGCg > 1:5110685‑M2/6‑35 (MQ=255) gcagGATGCCATTTTGCAGCATTCGGtgggggggg > 1:11020640/1‑32 (MQ=37) gcagGATGCCATTTTGCAGCATTCGGtgggggggg > 1:18573059/1‑32 (MQ=37) catgATGCCATTTTGCAGCATTCGGTGGGGGGGaa > 1:13482256/4‑35 (MQ=25) cagGATGCCATTTTGCAGCATTCGTTGGTGGCGaa > 1:8051516‑M2/4‑35 (MQ=255) cagGATGCCATTTTGCAGCATTCGGTGGTGGCGaa < 1:3646744‑M2/32‑1 (MQ=255) cagGATGCCATTTTGCAGCATTCGGTGGTGGCGaa < 1:13978718‑M2/32‑1 (MQ=255) agGATGCCATTTTGCAGCATTCGGTGGTGGcgatt < 1:20273890‑M2/33‑3 (MQ=255) agGATGCCATTTTGCAGCATTCGGTGGTGGGGAAt > 1:6138134‑M2/3‑35 (MQ=255) agGATGCCATTTTGCAGCATTCGGTGGTGGCGAAt < 1:12827251‑M2/33‑1 (MQ=255) agGATGCCATTTTGCAGCATTCGGTGGTGGCGAAt < 1:19647158‑M2/33‑1 (MQ=255) agGATGCCATTTTGCAGCATTCGGTGGTGGCGAAt < 1:14281202‑M2/33‑1 (MQ=255) gGATGCCATTTTGCAGCATTCGGTGGTGGCGAATc < 1:3415044‑M2/34‑1 (MQ=255) gGATGCCATTTTGCAGCATTCGGTGGTGGCGAATc < 1:16789438‑M2/34‑1 (MQ=255) gATGCCATTTTGCAGCATTCGGTGGTGGGGGATCa > 1:2180801/1‑35 (MQ=37) gATGCCATTTTGCAGCATTCGGTGGTGGCGAATCa < 1:578409/35‑1 (MQ=255) gATGCCATTTTGCAGCATTCGGTGGTGGCGAATCa < 1:343057/35‑1 (MQ=255) gATGCCATTTTGCAGCATTCGGTGGTGGCGAATCa < 1:13074566/35‑1 (MQ=255) gATGCCATTTTGCAGCATTCGGTGGGGGGGGATCa > 1:384216/1‑35 (MQ=25) | TAACGCCCGCCCGCAATATCAACCGCAGCCGCAGGATGCCATTTTGCAGCATTCGGTGGTGGCGAATCA > REL606/4217417‑4217485 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |