New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1760819 = | 58 (0.560) | 7 (0.080) | 5/42 | NT | 9.0% | coding (575/1701 nt) | ydiD | hypothetical protein |
? | REL606 | = 4434365 | 91 (1.010) | coding (58/1503 nt) | ytfR | predicted sugar transporter subunit: ATP‑binding component of ABC superfamily |
Only 100 of 105 total aligned reads displayed.
GCCACCTCTTCCCTCTCATTAAGTCAGATTATCGCCGACAATATCCCACTGACCACGGCGATAACGACC > REL606/1760785‑1760853 | gCCACCTCTTCCCTCTCATTAAGTCAGATTATCGc > 1:8974005/1‑35 (MQ=255) atcctccgcaccgaaggattaagtaaatttttccc < 1:10054729‑M1/1‑1 (MQ=255) atcctccgcaccgaaggattaagtaaatttttccc < 1:15453095‑M1/1‑1 (MQ=255) atcctccgcaccgaaggattaagtaaatttttccc < 1:18481861‑M1/1‑1 (MQ=255) atcctccgcaccgaaggattaagtaaatttttccc < 1:18337673‑M1/1‑1 (MQ=255) atcctccgcaccgaaggattaagtaaatttttccc > 1:656950‑M1/35‑35 (MQ=255) tcctccgcaccgaaggattaagtaaatttttcccc < 1:3102003‑M1/2‑1 (MQ=255) tcctccgcaccgaaggattaagtaaatttttcccc > 1:3784254‑M1/34‑35 (MQ=255) tcctccgcaccgaaggattaagtaaatttttcccc < 1:1289196‑M1/2‑1 (MQ=255) tcctccgcaccgaaggattaagtaaatttttcccc > 1:16572893‑M1/34‑35 (MQ=255) tcctccgcaccgaaggattaagtaaatttttcccc < 1:9098792‑M1/2‑1 (MQ=255) ccACCTCTTCCCTCTCATTAAGTCAGATTATCGcc > 1:15182276/1‑35 (MQ=255) ccACCTCTTCCCTCTCATTAAGTCAGATTATCGcc < 1:13455570/35‑1 (MQ=255) ccACCTCTTCCCTCTCATTAAGTCAGATTATCGcc < 1:7021288/35‑1 (MQ=255) ccACCTCTTCCCTCTCATTAAGTCAGATTATCGcc < 1:6686526/35‑1 (MQ=255) cctccgcaccgaaggattaagtaaatttttccCCg < 1:1218603‑M1/3‑1 (MQ=255) cctccgcaccgaaggattaagtaaatttttccCCg > 1:2217837‑M1/33‑35 (MQ=255) cctccgaaccgaaggattaagtaaatttttccCCg > 1:19087128‑M1/33‑35 (MQ=255) cACCTCTTCCCTCTCATTAAGTCAGATTATCGCCg < 1:1847154/35‑1 (MQ=255) cACCTCTTCCCTCTCATTAAGTCAGATTATCGCCg > 1:885908/1‑35 (MQ=255) cACCTCTTCCCTCTCATTAAGTCAGATTATCGCCg > 1:9145106/1‑35 (MQ=255) aCCTCTTCCCTCTCATTAAGTCAGATTATCGCCGa > 1:5119604/1‑35 (MQ=255) ccTCTTCCCTCTCATTAAGTCAGATTATCGCCGAc > 1:13379432/1‑35 (MQ=255) ccTCTTCCCTCTCATTAAGTCAGATTATCGCCGAc > 1:15722820/1‑35 (MQ=255) ccTCTTCCCTCTCATTAAGTCAGATTATCGCCGAc > 1:20590088/1‑35 (MQ=255) ctctTCCCTCTCATTAAGTCAGATTATCGCCGACa > 1:13073799/1‑35 (MQ=255) tctTCCCTCTCATTAAGTCAGATTATCGCCGACaa > 1:14295912/1‑35 (MQ=255) tctTCCCTCTCATTAAGTCAGATTATCGCCGACaa > 1:3400201/1‑35 (MQ=255) tCCCTCTCATTAAGTCAGATTATCGCCGACAatat > 1:17124819/1‑35 (MQ=255) tCCCTCTCATTAAGTCAGATTATCGCCGACAatat > 1:3431785/1‑35 (MQ=255) ctctCATTAAGTCAGATAATCGCCGACAATATccc > 1:4705925/1‑35 (MQ=255) tctcATTAAGTCAGATTATCGCCGACAATATCCCa > 1:20067026/1‑35 (MQ=255) tctcATTAAGTCAGATTATCGCCGACAATATCCCa > 1:18136782/1‑35 (MQ=255) ctcATTAAGTCAGATTATCGCCGACAATATCCCAc > 1:16190830/1‑35 (MQ=255) ctcATTAAGTCAGATTATCGCCGACAATATCCCAc > 1:424326/1‑35 (MQ=255) tcATTAAGTCAGATTATCGCCGACAATATCCCACt > 1:4147821/1‑35 (MQ=255) tcATTAAGTCAGATTATCGCCGACAATATCCCACt > 1:1017396/1‑35 (MQ=255) cATTAAGTCAGATTATCGCCGACAATATCCCACTg > 1:9182379/1‑35 (MQ=255) cATTAAGCCAGATTATCGCCGACAATATCCCACTg > 1:14064064/1‑35 (MQ=255) aTTAAGTCAGATTATCGCCGCCAATATCCCACTGa > 1:15844212/1‑35 (MQ=255) aTTAAGTCAGATTATCGCCGACAATATCCCACTGa > 1:1921220/1‑35 (MQ=255) aTTAAGTCAGATTATCGCCGACAATATCCCACTGa > 1:105788/1‑35 (MQ=255) aTTAAGTCAGATTATCGCCGACAATATCCCACTGa > 1:10646116/1‑35 (MQ=255) aTTAAGTCAGATTATCGCCGACAATATCCCACTGa > 1:16326062/1‑35 (MQ=255) ttAAGTCAGATTATCGCCGACAATATCCCACTGAc > 1:6899211/1‑35 (MQ=255) ttAAGTCAGATTATCGCCGACAATATCCCACTGAc > 1:12475099/1‑35 (MQ=255) tAAGTCAGATTATCGCCGACAATATCCCACTGAcc > 1:7716148/1‑35 (MQ=255) aaaGTCAGATTATCGCCGACAATATCCCACTGAcc < 1:11503036/34‑1 (MQ=255) aaGTCAGATTATCGCCGACAATATCCCACTGACCa > 1:16082499/1‑35 (MQ=255) aaGTCAGATTATCGCCGACAATATCCCACTGACCa > 1:1386489/1‑35 (MQ=255) aGTCAGATTATCGCCGACAATATCCCACTGACCAc > 1:12104056/1‑35 (MQ=255) aGTCAGATTATCGCCGACAATATCCCACTGACCAc > 1:468836/1‑35 (MQ=255) aGTCAGATTATCGCCGACAATATCCCACTGACCAc > 1:19506799/1‑35 (MQ=255) aGTCAGATTATCGCCGACAATATCCCACTGACCAc > 1:12983572/1‑35 (MQ=255) gtaaatttttccCCGACAATATCCCACTGACCACg > 1:9628592‑M1/13‑35 (MQ=255) gccAGATTATCGCCGACAATATCCCACTGACCACg < 1:17147800/33‑1 (MQ=255) gTCAGATTATCGCCGACAATATCCCACTGACCACg > 1:12465960/1‑35 (MQ=255) tCAGATTATCGCCGACAATATCCCACTGACCACgg < 1:16332523/35‑1 (MQ=255) aagtttttccCCGACAATATCCCACTGACCACGGc > 1:2664451‑M1/11‑35 (MQ=255) aagtttttccCCGACAATATCCCACTGACCACGGc > 1:1493840‑M1/11‑35 (MQ=255) aaatttttccCCGACAATATCCCACTGACCACGGc > 1:1950362‑M1/11‑35 (MQ=255) aaGATTTTCCCCGACAATATCCCACTGACCACGGc < 1:14494440/34‑1 (MQ=37) aGATTATCGCCGACAATATCCCACTGACCACGGCg < 1:20431006/35‑1 (MQ=255) aGATTATCGCCGACAATATCCCACTGACCACGGCg > 1:2903633/1‑35 (MQ=255) aGATTATCGCCGACAATATCCCACTGACCACGGCg > 1:1735770/1‑35 (MQ=255) gATTATCGCCGACAATATCCCACTGACCACGGCGa > 1:831151/1‑35 (MQ=255) gATTATCGCCGACAATATCCCACTGACCACGGCGa > 1:8498519/1‑35 (MQ=255) gATTATCGCCGACAATATCCCACTGACCACGGCGa > 1:19667594/1‑35 (MQ=255) gATTATCGCCGACAATATCCCACTGACCACGGCGa > 1:11348197/1‑35 (MQ=255) gATTATCGCCGACAATATCCCACTGACCACGGCGa > 1:304907/1‑35 (MQ=255) gATTATCGCCGACAATATCCCACTGACCACGGCGa > 1:2676515/1‑35 (MQ=255) atttttcgCCGACAATATCCCACTGACCACGGCGa > 1:17798209‑M1/9‑35 (MQ=255) tttttccCCGACAATATCCCACTGACCACGGCGAt > 1:6349113‑M1/8‑35 (MQ=255) aTTATCGCCGACAATATCCCACTGACCACGGCGAt > 1:17458343/1‑35 (MQ=255) aTTATCGCCGACAATATCCCACTGACCACGGCGAt > 1:958080/1‑35 (MQ=255) aTTATCGCCGACAATATCCCACTGACCACGGCGAt > 1:14205420/1‑35 (MQ=255) aTTATCGCCGACAATATCCCACTGACCACGGCGAt > 1:4328146/1‑35 (MQ=255) aTTATCGCCGACAATATCCCACTGACCACGGCGAt > 1:4560499/1‑35 (MQ=255) aTTATCGCCGACAATATCCCACTGACCACGGCGAt > 1:1153149/1‑35 (MQ=255) aTTATCGCCGACAATATCCCACTGACCACGGCGAt > 1:11503475/1‑35 (MQ=255) aTTATCGCCGACAATATCCCACTGACCACGGCGAt > 1:14776603/1‑35 (MQ=255) ttttccCCGACAATATCCCACTGACCACGGCGATa > 1:2151917‑M1/7‑35 (MQ=255) ttATCGCCGACAATATCCCACTGACCACGGCGATa > 1:2014310/1‑35 (MQ=255) ttATCGCCGACAATATCCCACTGACCACGGCGATa > 1:8339241/1‑35 (MQ=255) ttATCGCCGACAATATCCCACTGACCACGGCGATa > 1:398225/1‑35 (MQ=255) ttATCGCCGACAATATCCCACTGACCACGGCGATa > 1:360628/1‑35 (MQ=255) tcccCCGACAATATCCCACTGACCACGGCGATAAc > 1:7715556‑M1/5‑35 (MQ=255) tccCCGACAATATCCCACTGACCACGGCGATAACg > 1:6767428‑M1/4‑35 (MQ=255) tccCCGACAATATCCCACTGACCACGGCGATAACg > 1:5034415‑M1/4‑35 (MQ=255) tCGCCGACAATATCCCACTGACCACGGCGATAACg < 1:4486292/35‑1 (MQ=255) tCGCCGACAATATCCCACTGACCACGGCGATAACg < 1:11373992/35‑1 (MQ=255) ccGCCGACAATATCCCACTGAACACGGCGATAACg < 1:15056006/34‑1 (MQ=255) cGCCGACAATATCCCACTGACCACGGCGATAACGa > 1:16017047/1‑35 (MQ=255) cGCCGACAATATCCCACTGACCACGGCGATAACGa > 1:14700286/1‑35 (MQ=255) gCCGACAATATCCCACTTACCACGGCGATAACCAc > 1:16108112/1‑35 (MQ=37) gCCGACAATATCCCACTGACCACGGCGATAACGAc > 1:3793212/1‑35 (MQ=255) cCCGACAATATCCCCCTGACCACGGCGATAACGAc > 1:761807‑M1/2‑35 (MQ=255) cCCGACAATATCCCACTGACCACGGCGATAACGAc > 1:11464009‑M1/2‑35 (MQ=255) CCGACAATATCCCACTGACCACGGCGATAACGAcc > 1:16222397‑M1/1‑35 (MQ=255) CCGACAATATCCCACTGACCACGGCGATAACGAcc < 1:78427‑M1/35‑1 (MQ=255) | GCCACCTCTTCCCTCTCATTAAGTCAGATTATCGCCGACAATATCCCACTGACCACGGCGATAACGACC > REL606/1760785‑1760853 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |