New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1723584 = | 50 (0.490) | 4 (0.050) | 3/36 | NT | 6.2% | intergenic (‑190/‑118) | ydhQ/valV | hypothetical protein/tRNA‑Val |
? | REL606 | = 2780594 | 110 (1.070) | intergenic (‑196/‑120) | cysJ/ygcM | sulfite reductase, alpha subunit, flavoprotein/6‑pyruvoyl tetrahydrobiopterin synthase (PTPS) |
CGACCGTTTGCAGAGCTTTTAAGCAAATTGGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1723617‑1723584 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGTTTTTCA < REL606/2780594‑2780584 |||||| CGACCGTTTGCAGAGCTTTTAAGCAAATTGGCTAA > 1:1039772/1‑35 CGACCGTTTGCAGAGCTTTTAAGCAAATTGGCTAA > 1:1519610/1‑35 CGACCGTTTGCAGAGCTTTTAAGCAAATTGGCTAA > 1:15562145/1‑35 GACCGTTTGCAGAGCTTTTAAGCAAATTGGCTAAA > 1:15692265/1‑35 GACCGTTTGCAGAGCTTTTAAGCAAATTGGCTAAA > 1:6993245/1‑35 GACCGTTTGCAGAGCTTTTAAGCAAATTGGCTAAA > 1:5750008/1‑35 GACCGTTTGCAGAGCTTTTAAGCAAATTGGCTAAA > 1:5578276/1‑35 ACCGTTTGCAGAGCTTTTAAGCAAATTGGCTAAAa > 1:17105628/1‑34 ACCGTTTGCAGAGCTTTTAAGCAAATTGGCTAAAT > 1:16297765/1‑35 CGTTTGCAGAGCTTTTAAGCAAATTGGCTAAATTT > 1:8424190/1‑35 GTTTGCAGAGCTTTTAAGCAAATTGGCTAAATTTT > 1:20051993/1‑35 GTTTGCAGAGCTTTTAAGCAAATTGGCTAAATTTT > 1:5382297/1‑35 GTTTGCAGAGCTTTTAAGCAAATTGGCTAAAATTT > 1:19696772/1‑35 TGCAGAGCTTTTAAGCAAATTGGCTATATTTTTTT > 1:18181257/1‑35 CAGAGCTTTTAAGCAAATTGGCTAAATTTTTTTtt > 1:1014444/1‑33 AGAGCTTTTAAGCAAATTGGCTAAATTTTTTTTTT > 1:280/1‑35 AGAGCTTTTAAGCAAATTGGCTAAAATTTTTTGTT > 1:17696788/1‑35 AGCTTTTAAGCAAATTGGCTAAATTTTTTTTTTTT > 1:9666375/1‑35 TTTTAAGCAAATTGGCTAAATTTTTTTTTTTTTCA > 1:2353982/1‑35 |||||| CGACCGTTTGCAGAGCTTTTAAGCAAATTGGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1723617‑1723584 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGTTTTTCA < REL606/2780594‑2780584 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |