New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1286707 = | 97 (0.940) | 9 (0.110) | 4/38 | NT | 10.5% | intergenic (+31/‑152) | narI/ECB_01206 | nitrate reductase 1, gamma (cytochrome b(NR)) subunit/hypothetical protein |
? | REL606 | = 1424360 | NA (NA) | coding (192/294 nt) | ECB_01344 | conserved hypothetical protein |
CATAAAAAAACCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1286723‑1286707 ‑‑‑‑‑‑‑‑‑‑‑‑ccgccCCACCACGGCATATTCATTCGCTTGCCATGCCCG < REL606/1424360‑1424327 CATAAACAAACCCCGCCCCACCACGGCATATTCAT < 1:7856906/35‑1 AAAAAACCCCCGCCCCACCACGGCATATTCATTCG < 1:16944427/35‑1 AAAAAAACCCCGCCCCACCACGGCATATTCATTCG < 1:16936278/35‑1 AAAAAAACCCCGCCCCACCACGGCATATTCATTCG < 1:4422187/35‑1 gAAAAACCCCGCCCCACCACGGCATATTCATTCGC < 1:1723316/34‑1 cAAAACCCCCGCCCCACCACGGCATATTCATTCGC < 1:19147040/34‑1 AAAAACCCCCGCCCCACCACGGCATATTCATTCGC < 1:46011/35‑1 AAAACCCCCGCCCCACCACGGCATATTCATTCGCc < 1:8935846/35‑2 AAAAACCCCGCGCCACCACGGCATATTCATTCGCT < 1:15657331/35‑1 cAAACCCCGCCCCACCACGGCATATTCATTCGCTT < 1:10717920/34‑1 cAAACCCAGCCCCACCACGGCATATTCATTCGCTT < 1:8434527/34‑1 acAACCCCGCCCCACCACGGCATATTCATTCGCTT < 1:2408897/33‑1 cccCCCCGCCCCACCACGGCATATTCATTCGCTTG < 1:567106/32‑1 cccCCCCGCCCCACCACGGCATATTCATTCGCTTG < 1:7171694/32‑1 cacCCCCGCCCCACCACGGCATATTCATTCGCTTG < 1:16519845/32‑1 aacCCCCGCCCCACCACGGCATATTCATTCGCTTG < 1:8449417/32‑1 AAACCCCGCCCCACCACGGCATATTCATTCGCTTG < 1:5323823/35‑1 ccCCCCGCCCCACCACGGCATATTCATTCGCTTGC < 1:7492014/33‑1 cACCCCGCCCCACCACGGCATATTCATTCGCTTGC < 1:3969776/34‑1 AACCCCGCCCCACCACGGCATATTCATTCGCTTGC < 1:14274986/35‑1 cCCCCGCCCCACCACGGCATATTCATTCGCTTGCC < 1:2300674/34‑1 cCCCCGCCACACCACGGCATATTCATTCGCTTGCC < 1:15406209/34‑1 ACCCCGCCCCACCACGGCATATTCATTCGCTTGCC < 1:13796816/35‑1 CCCCGCCCCACCACGGCATATTCATTCGCTTGCCA < 1:6966333/35‑1 CCCCGCCCCACCACGGCATATTCATTCGCTTGCCA < 1:15152729/35‑1 CCCCGCCCCACCACGGCATATTCATTCGCTTGCCA < 1:13391104/35‑1 CCCCGCCCCACCACGGCATATTCATTCGCTTGCCA < 1:8602864/35‑1 CCCCGCCCCACCACGGCATATTCATTCGCTTGCCA < 1:13277681/35‑1 CCCCGCCCCACCACGGCATATTCATTCGCTTGCCA < 1:10394868/35‑1 CCCGCCCCACCACGGCATATTCATTCGCTTGCCAT < 1:11601082/35‑1 CCCGCCCCACCACGGCATATTCATTCGCTTGCCAT < 1:18527477/35‑1 CCGCCCCCCCACGGCATATTCATTCGCTTGCCATG < 1:4144352/35‑1 CCGCCCCCCCACGGCATATTCATTCGCTTGCCATG < 1:5710931/35‑1 CCGCCCCACCACGGCATATTCATTCGCTTGCCATG < 1:5532904/35‑1 CCGCCCCACCACGGCATATTCATTCGCTTGCCATG > 1:4891461/1‑35 CCGCCCCACCACGGCATATTCATTCGCTTGCCATG > 1:4881117/1‑35 CCGCCCCACCACGGCATATTCATTCGCTTGCCATG > 1:14276895/1‑35 CCGCCCCACCACGGCATATTCATTCGCTTGCCATG < 1:1341671/35‑1 ccCCCCACCACGGCATATTCATTCGCTTGCCATGC < 1:20097113/33‑1 ccCCCCACCACGGCATATTCATTCGCTTGCCATGC < 1:5377510/33‑1 CGCCCCATCACGGCATATTCATTCGCTTGCCATGC < 1:1477044/35‑1 CGCCCCACCACTGCATATTCATTCGCTTGCCATGC > 1:3623268/1‑35 CGCCCCACCACGGCATTTTCATTCGCTTGCCATGC > 1:11125956/1‑35 CGCCCCACCACGGCATATTCATTCGCTTGCCATGC < 1:5413324/35‑1 CGCCCCACCACGGCATATTCATTCGCTTGCCATGC < 1:4855331/35‑1 CGCCCCACCACGGCATATTCATTCGCTTGCCATGC < 1:9304104/35‑1 CGCCCCACCACGGCATATTCATTCGCTTGCCATGC > 1:10393057/1‑35 CGCCCCACCACGGCATATTCATTCGCTTGCCATGC < 1:13694134/35‑1 CGCCCCACCACGGCATATTCATTCGCTTGCCATGC > 1:13861330/1‑35 CGCCCCACCACGGCATATTCATTCGCTTGCCATGC > 1:16026648/1‑35 cCCCCACCACGGCATATTCATTCGCTTGCCATGCC < 1:15679843/34‑1 GCCCCCCCACGGCATATTCATTCGCTTGCCATGCC < 1:20061223/35‑1 GCCCCCCCACGGCATATTCATTCGCTTGCCATGCC < 1:2609840/35‑1 GCCCCACCACGGCATATTCATTCGCTTGCCATGCC > 1:10402864/1‑35 GCCCCACCACGGCATATTCATTCGCTTGCCATGCC > 1:8611063/1‑35 GCCCCACCACGGCATATTCATTCGCTTGCCATGCC < 1:12140398/35‑1 GCCCCACCACGGCATATTCATTCGCTTGCCATGCC > 1:8038392/1‑35 CCCCCCCACGGCATATTCATTCGCTTGCCATGCCC < 1:5468912/35‑1 CCCCCCCACGGCATATTCATTCGCTTGCCATGCCC < 1:11739491/35‑1 CCCCACCACGGCATATTCATTCGCTTGCCATGCac > 1:10905641/1‑33 CCCCACCACGGCATATTCATTCGCTTGCCATGCCC > 1:5727569/1‑35 CCCCACCACGGCATATTCATTCGCTTGCCATGCCC > 1:278628/1‑35 CCCCACCACGGCATATTCATTCGCTTGCCATGCCC < 1:3161972/35‑1 CCCCACCACGGCATATTCATTCGCTTGCCATGCCC > 1:1072083/1‑35 CCCCACAACGGCATATTCATTCGCTTGCCATGCCC < 1:1050444/35‑1 CCCACCACGGCATATTCATTCGCTTGCCATGCGCG > 1:6362922/1‑35 CCCACCACGGCATATTCATTCGCTTGCCATGCCCG < 1:15774873/35‑1 CCCACCACGGCATATTCATTCGCTTGCCATGCCCG < 1:20226855/35‑1 CCCACCACGGCATATTCATTCGCTTGCCATGCCCG < 1:4393926/35‑1 CATAAAAAAACCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1286723‑1286707 ‑‑‑‑‑‑‑‑‑‑‑‑ccgccCCACCACGGCATATTCATTCGCTTGCCATGCCCG < REL606/1424360‑1424327 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |