New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 790656 = | 71 (0.690) | 5 (0.070) | 3/34 | NT | 9.7% | coding (88/186 nt) | ECB_00731 | conserved hypothetical protein |
? | REL606 | 1598222 = | 43 (0.590) | coding (459/1461 nt) | ydfI | predicted mannonate dehydrogenase |
Only 100 of 106 total aligned reads displayed.
CCTCAACAATCACCCCTGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGCACGTCGGCAGCGACCATCGGG > REL606/1598188‑1598255 | ccTCAACAATCACCCCTGTTGCTGTTTTCGGCt‑gg < 1:9576127/35‑1 (MQ=255) ccTCAACAATCACCCCTGTTGCTGTTTTCGGCt‑gg < 1:7446978/35‑1 (MQ=255) ccTCAACAATCACCCCTGTTGCTGTTTTCGGCt‑gg < 1:13314274/35‑1 (MQ=255) ccTCAACAATCACCCCTGTTGCTGTTTTCGGCt‑gg < 1:20089729/35‑1 (MQ=255) gcatttcatcgataacttttggcgtcatcggctgg > 1:4689733‑M2/35‑35 (MQ=255) cTCAACAATCACCCCTGTTGCTGTTTTCGGCt‑ggt < 1:15580710/35‑1 (MQ=255) cTCAACAATCACCCCTGTTGCTGTTTTCGGCt‑ggt < 1:12161589/35‑1 (MQ=255) cTCAACAATCACCCCTGTTGCTGTTTTCGGCt‑ggg > 1:4733319/1‑34 (MQ=255) cTCAACAATCACCCCTGTTGCTGTTTTCGGCt‑ggg > 1:13189264/1‑34 (MQ=255) cTCAACAATCACCCCTGTTGCTGTTTTCGGCt‑ggg > 1:12871048/1‑34 (MQ=255) tCAACAATCACCCCTGTTGCTGTTTTCGGCt‑ggtg < 1:8220176/35‑1 (MQ=255) tCAACAATCACCCCTGTTGCTGTTTTCGGCt‑gggg > 1:12211670/1‑33 (MQ=255) caacaaTCACCCCTGTTGCTGTTTTCGGCt‑ggggg > 1:16061103/1‑35 (MQ=255) atttcatcgataacttttggcgtcatcggctggtg > 1:55186‑M2/33‑35 (MQ=255) atttcatcgataacttttggcgtcatcggctgggg > 1:12782306‑M2/33‑33 (MQ=255) atttcatcgataacttttggcgtcatcggctgggg > 1:8541351‑M2/33‑33 (MQ=255) atttcatcgataacttttggcgtcatcggctgggg > 1:15803974‑M2/33‑33 (MQ=255) atttcatcgataacttttggcgtcatcggctggcg > 1:6989929‑M2/33‑33 (MQ=255) tttcatcgataacttttggcgtcatcggctggtgg > 1:3311714‑M2/32‑35 (MQ=255) tttcatcgataacttttggcgtcatcggctggtgg > 1:16360882‑M2/32‑35 (MQ=255) aacaaTCACCCCTGTTGCTGTTTTCGGCT‑GGTggg < 1:15527808/35‑1 (MQ=255) aacaaTCACCCCTGTTGCTGTTTTCGGCT‑GGGggg > 1:14070763/1‑35 (MQ=255) aacaaTCACCCCTGTTGCTGTTTTCGGCT‑GGGggg > 1:4756541/1‑35 (MQ=255) aacaaTCACCCCTGTCGCTGTTTTCGGCT‑GGGggg > 1:16635790/1‑35 (MQ=38) ttcatcgataacttttggcgtcatcggctggtgcg > 1:17650293‑M2/31‑33 (MQ=255) acaaTCACCCCTGTTGCTGTTTTTGGCT‑GGGgggg > 1:623112/1‑35 (MQ=37) acaaTCACCCCTGTTGCTGTTTTCGGCT‑GGTgggg < 1:2274539/35‑1 (MQ=255) acaaTCACCCCTGTTGCTGTTTTCGGCT‑GGGgggg > 1:8581379/1‑35 (MQ=255) tcatcgataacttttggcgtcatcggctgGtgggc > 1:10834876‑M2/30‑34 (MQ=255) tcatcgataacttttggcgtcatcggctgGggggc > 1:12169571‑M2/30‑34 (MQ=255) tcatcgataacttttggcgtcatcggctgGGgggg > 1:13371507‑M2/30‑35 (MQ=255) caaTCACCCCTGTTGCTGTTTTCGGCT‑GGGggggg > 1:11808008/1‑34 (MQ=255) catcgataacttttggcgtcatcggctgGTGGGGa > 1:6573006‑M2/29‑35 (MQ=255) aaTCACCCCTGTTGCTGTTTTCGGCT‑GGGgggggg > 1:13719478/1‑33 (MQ=37) aaTCACACCTGTTGCTGTTTTCGGCT‑GGTGGGGAt < 1:13158460/35‑1 (MQ=255) atcgataacttttggcgtcatcggctggtgggtcc > 1:14827760‑M2/28‑32 (MQ=255) atcgataacttttggcgtcatcggctggtgggggt > 1:2069212‑M2/28‑33 (MQ=255) atcgataacttttggcgtcatcggctggtgggccg > 1:7169365‑M2/28‑32 (MQ=255) atcgataacttttggcgtcatcggctgGTGGGGAt > 1:3107425‑M2/28‑35 (MQ=255) aTCACCCCTGTTGCTGTTTTCGGCT‑GGGggggggt > 1:11929563/1‑32 (MQ=37) aTCACCCCTGTTGCTGTTTTCGGCT‑GGGGGGGGtt > 1:14803063/1‑35 (MQ=37) aTCACCACTGTTGCTGTTTTCGGCT‑GGTGGGGAtt < 1:13842342/35‑1 (MQ=255) tcgataacttttggcgtcatcggctgGTGGGCata > 1:7178786‑M2/27‑34 (MQ=255) tCACCCCTGTTGCTGTTTTCGGCT‑GGTGGGGAttt < 1:16250320/35‑1 (MQ=255) cACCCCTGTTGCTGTTTTCGGCT‑GGTGGGGAtttt < 1:932677/35‑1 (MQ=255) cACCCATGTTGCTGTTTTCGGCT‑GGTGGGGAtttt < 1:3248683/35‑1 (MQ=255) aCCCCTGTTGCTGTTTTCGGCTGGGTGGGGTtttt > 1:7685497/1‑35 (MQ=25) aCCCCTGTTGCTGTTTTCGGCT‑GGTGGGGATTTTg < 1:7055315/35‑1 (MQ=255) ccccTGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGc < 1:390813/35‑1 (MQ=255) ccccTGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGc < 1:14610772/35‑1 (MQ=255) ccccTGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGc < 1:4590425/35‑1 (MQ=255) cccTGTTGCTGTTTTCGGCT‑GGGGGGGGtttttta > 1:17477312/1‑32 (MQ=25) cgtGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGCAc < 1:16940457/33‑1 (MQ=255) ccTGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGCAc < 1:17904352/35‑1 (MQ=255) ccTGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGCAc < 1:12109981/35‑1 (MQ=255) cTGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGCACg < 1:19094104/35‑1 (MQ=255) cTGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGCACg < 1:1788850/35‑1 (MQ=255) cTGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGCACg < 1:12612518/35‑1 (MQ=255) tggtGCTGTTTTCGGCT‑GGTGGGGATTTTGCACGt < 1:18123756/32‑1 (MQ=255) tGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGCACGt < 1:7363317/35‑1 (MQ=255) tGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGCACGt < 1:261396/35‑1 (MQ=255) tGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGCACGt < 1:16516194/35‑1 (MQ=255) ttGCTGTTTTCGGCT‑GGTGGGGATTTTGCACGTCg < 1:4466161/35‑1 (MQ=255) ttGCTGTTTTCGGCT‑GGTGGGGATTTTGCACGTCg < 1:5561629/35‑1 (MQ=255) tGCTGTTTTCGGCT‑GGTGGGGATTTTGCACGTCgg < 1:11105818/35‑1 (MQ=255) tGCTGTTTTCGGCT‑AGTGGGGATTTTGCACGTCgg < 1:17255001/35‑1 (MQ=255) gCTGTTTTCGGCT‑GGTGGGGATTTTGCACGTCGGc < 1:3568071/35‑1 (MQ=255) gCTGTTTTCGGCT‑GGTGGGGATTTTGCACGTCGGc < 1:7615023/35‑1 (MQ=255) gCTGTTTTCGGCT‑GGTGGGGATTTTGCACGTCGGc < 1:7932698/35‑1 (MQ=255) gCTGTTTTCGGCT‑GGGGGGGGTTTTTTACGTCGGc > 1:20451520/1‑35 (MQ=19) cTGTTTTCGGCT‑GGTGGGGATTTTGCACGTCGGCa < 1:20547975/35‑1 (MQ=255) cTGTTTTCGGCT‑GGTGGGGATTTTGCACGTCGGCa < 1:4742644/35‑1 (MQ=255) cTGTTTTCGGCT‑GGTGGGGATTTTGCACGTCGGCa < 1:10306732/35‑1 (MQ=255) cTGTTTTCGGCT‑GGGGGGGGTTTTGCAAGGCgggt > 1:5541753/1‑33 (MQ=16) tGTTTTCGGCT‑GGTGGGGATTTTGCACGTCGGCAg < 1:18773085/35‑1 (MQ=255) tGTTTTCGGCT‑GGTGGGGATTTTGCACGTCGGCAg < 1:12278522/35‑1 (MQ=255) gTTTTCGGCT‑GGTGGGGATTTTGCACGTCGGCAGc < 1:4078033/35‑1 (MQ=255) gTTTTCGGCT‑GGTGGGGATTTTGCACGTCGGCAGc < 1:9242765/35‑1 (MQ=255) gTTTTCGGCG‑GGTGGGGATTTTGCACGTCGGCAGc < 1:2743461/35‑1 (MQ=255) ttttCGGCT‑GGTGGGGATTTTGCACGTCGGCAGCg < 1:962566/35‑1 (MQ=255) ttCGGCT‑GGTGGGGATTTTGCACGTCGGCAGCGAc < 1:3562803/35‑1 (MQ=255) tcggctgGTGGGGATTTTGCACGTCGGCAGCGAcc < 1:19963831‑M2/28‑1 (MQ=255) ggctgGTGGGGATTTTGCACGTCGGCAGCGACcac > 1:17301248‑M2/6‑34 (MQ=255) ggctgGTGGGGATTTTGCACGTCGGCAGCGACCAt < 1:7428059‑M2/30‑1 (MQ=255) ggctgGTGGGGATTTTGCACGTCGGCAGCGACCAt < 1:17074790‑M2/30‑1 (MQ=255) gCT‑GGTGGGGATTTTGCACGTCGGCAGCGGCCCTc > 1:4180505/1‑35 (MQ=25) gctgGTGGGGATTTTGCACGTCGGCAGGGACCATc > 1:16812515‑M2/5‑35 (MQ=255) gctgGTGGGGATTTTGCACGTCGGCAGCGACCATc > 1:3097965‑M2/5‑35 (MQ=255) gctgGTGGGGATTTTGCACGTCGGCAGCGACCATc < 1:19501909‑M2/31‑1 (MQ=255) gctgGTGGGGATTTTGCACGTCGGCAGCGACCATc < 1:18121086‑M2/31‑1 (MQ=255) gctgGTGGGGATTTTGCACGTCGGCAGCGACCATc < 1:17084617‑M2/31‑1 (MQ=255) ctgGTGGGGATTTTGCACGTCGGCAGCGACCATCg < 1:11034346‑M2/32‑1 (MQ=255) ctgGTGGGGATTTTGCACGTCGGCAGCGACCATCg > 1:15924824‑M2/4‑35 (MQ=255) gGTGGGGATTTTGCACGTCGGCAGCGACCATCggg > 1:1149448‑M2/2‑35 (MQ=255) gGTGGGGATTTTGCACGTCGGCAGCGACCATCggg < 1:1279270‑M2/34‑1 (MQ=255) gGTGGGGATTTTGCACGTCGGCAGCGACCATCggg < 1:9126259‑M2/34‑1 (MQ=255) gGTGGGGATTTTGCACGTCGGCAGCGACCATCggg < 1:9070647‑M2/34‑1 (MQ=255) gGTGGGGATTTTGCACGTCGGCAGCGACCATCggg < 1:8031811‑M2/34‑1 (MQ=255) gGTGGGGATTTTGCACGTCGGCAGCGACCATCggg < 1:7183536‑M2/34‑1 (MQ=255) gGTGGGGATTTTGCACGTCGGCAGCGACCATCggg > 1:7023805‑M2/2‑35 (MQ=255) | CCTCAACAATCACCCCTGTTGCTGTTTTCGGCT‑GGTGGGGATTTTGCACGTCGGCAGCGACCATCGGG > REL606/1598188‑1598255 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |