New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 965820 = | 63 (0.610) | 8 (0.100) | 3/36 | NT | 12.3% | coding (842/909 nt) | ycaN | predicted DNA‑binding transcriptional regulator |
? | REL606 | 4368357 = | 67 (0.870) | coding (159/969 nt) | psd | phosphatidylserine decarboxylase |
Only 100 of 180 total aligned reads displayed.
CGTTAAAGGTGCGGTAGCTGGCGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTATTTAA > REL606/4368323‑4368391 | cGTTAGAGGTGCGGTAGCTGGCGGTGTCCGGCttt < 1:12267551/35‑1 (MQ=255) cGTTAAAGGTGCGGTAGCTGGCGGTGTCCGGCttt < 1:4935509/35‑1 (MQ=255) cGTTAAAGGTGCGGTAGCTGGCGGTGTCCGGCttt < 1:12337872/35‑1 (MQ=255) ttatccaaaccgccagtatatgtcctgcggctttc > 1:8414567‑M2/34‑34 (MQ=255) gTTAAAGGTGCGGTAGCTGGCGGTGTCCGGCtttt < 1:3916892/35‑1 (MQ=255) gTTAAAGGTGCGGTAGCTGGCGGTGTCCGGCtttt < 1:13418738/35‑1 (MQ=255) ttAAAGGTGCGGTAGCTGGCGGTGTCCGGCTTTTg < 1:13773459/35‑1 (MQ=255) ttAAAGGTGCGGTAGCTGGCGGTGTCCGGCTTTTg < 1:6957021/35‑1 (MQ=255) tAAAGGTGCGGTAGCTGGCGGTGTCCGGCTTTTgc < 1:15323778/35‑1 (MQ=255) atccaaaccgccagtatatgtcctgcggcttTTgc > 1:19381389‑M2/32‑35 (MQ=255) aaaGGTGCGGTAGCTGGCGGTGTCCGGCTTTTgcg < 1:10328182/35‑1 (MQ=255) aaaGGTGCGGTAGCTGGCGGTGTCCGGCTTTTgcg < 1:7312459/35‑1 (MQ=255) ccaaaccgccagtatatgtcctgcggcttTTgcgc > 1:9518936‑M2/30‑35 (MQ=255) ccaaaccgccagtatatgtcctgcggcttTCgcgc > 1:20255089‑M2/30‑35 (MQ=255) aaGGTGCGGTAGCTGGCGGTGTCCGGCTTTTgcgc < 1:20105141/35‑1 (MQ=255) aaGGTGCGGTAGCTGGCGGTGTCCGGCTTTTgcgc < 1:4697827/35‑1 (MQ=255) aaGGTGCGGTAGCTGGCGGTGTCCGGCTTTTgcgc < 1:10786022/35‑1 (MQ=255) aGGTGCGGTAGCTGGCGGTGTCCGGCTTTTGCGcc < 1:19043027/35‑1 (MQ=255) naaccgccagtatatgtcctgcggcttTCGCGCct > 1:13800169‑M2/28‑35 (MQ=255) ggTGCGGTAGCTGGCGGTGTCCGGCTTTTGCGCct < 1:3197121/35‑1 (MQ=255) ggTGCGGTAGCTGGCGGTGTCCGGCTTTTGCGCct < 1:3256913/35‑1 (MQ=255) ggTGCGGTAGCTGGCGGTGTCCGGCTTTTGCGCct < 1:11745522/35‑1 (MQ=255) aaaccgccagtatatgtcctgcggcttTTGCGCct > 1:6796313‑M2/28‑35 (MQ=255) tGCGGTAGCTGGCGGTGTCCGGCTTTTGCGCctct < 1:8237135/35‑1 (MQ=255) tGCGGTAGCTGGCGGTGTCCGGCTTTTGCGCctct < 1:16263647/35‑1 (MQ=255) gCGGTAGCTGGCGGTGTCCGGCTTTTGCGCCTCtt < 1:4425823/35‑1 (MQ=255) gCGGTAGCTGGCGGTGTCCGGCTTTTGCGCCTCtt < 1:3427311/35‑1 (MQ=255) cgccagtatatgtcctgcggcttTTGCGCCTTttt > 1:17356075‑M2/24‑35 (MQ=255) cGGTAGCTGGCGGTGTCCGGCTTTTGCGCCTCttt < 1:3138377/35‑1 (MQ=255) cGGTAGCTGGCGGTGTCCGGCTTTTGCGCCTCttt < 1:943323/35‑1 (MQ=255) cGGTAGCTGGCGGTGTCCGGCTTTTGCGCCTCttt < 1:3627702/35‑1 (MQ=255) cGGTAGCTGGCGGTGTCCGGCTTTTGCGCATCttt < 1:11466758/35‑1 (MQ=255) ggTAGCTGGCGGTGTCCGGCTTTTGCGCCTCTTTc < 1:15606985/35‑1 (MQ=255) ggTAGCTGGCGGTGTCCGGCTTTTGCGCCTCTTTc < 1:20428400/35‑1 (MQ=255) ggTAGCTGGCGGTGTCCGGCTTTTGCGCCTCTTTc < 1:5581268/35‑1 (MQ=255) ggTAGCTGGCGGTGTCCGGCTTTTGCGCCTCTTTc < 1:17859081/35‑1 (MQ=255) tAGCTGGCGGTGTCCGGCTTTTGCGCCTCTTTCAt < 1:13063297/35‑1 (MQ=255) tAGCTGGCGGTGTCCGGCTTTTGCGCCTCTTTCAt < 1:8003616/35‑1 (MQ=255) gCTGGCGGTGTCCGGCTTTTGCGCCTCTTTCATGt < 1:14747427/35‑1 (MQ=255) gCTGGCGGTGTCCGGCTTTTGCGCCTCTTTCATGt < 1:17255821/35‑1 (MQ=255) cTGGCGGTGTCCGGCTTTTGCGCCTCTTTCATGTc < 1:14014268/35‑1 (MQ=255) cTGGCGGTGTCCGGCTTTTGCGCCTCTTTCATGTc < 1:12986488/35‑1 (MQ=255) cTGGCGGTGTCCGGCTTTTGCGCCTCTTTCATGTc < 1:20584346/35‑1 (MQ=255) tGGCGGTGTCCGGCTTTTGCGCCTCTTTCATGTCg < 1:14871316/35‑1 (MQ=255) ggCGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGa < 1:6223118/35‑1 (MQ=255) gCGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGAc < 1:4687357/35‑1 (MQ=255) gCGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGAc < 1:19780724/35‑1 (MQ=255) gCGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGAc < 1:6893257/35‑1 (MQ=255) gCGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGAc > 1:13129929/1‑35 (MQ=255) gCGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGAc > 1:17805284/1‑35 (MQ=255) gCGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGAc > 1:14578309/1‑35 (MQ=255) gCGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGAc < 1:10201550/35‑1 (MQ=255) gCGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGAc < 1:10199841/35‑1 (MQ=255) cGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGAcc > 1:11624130/1‑35 (MQ=255) cGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGAcc < 1:13656071/35‑1 (MQ=255) ggTGTCCGGCTTTTGCGCCTCTTTCATGTCGACCt < 1:7763077/35‑1 (MQ=255) ggTGTCCGGCTTTTGCGCCTCTTTCATGTCGACCt > 1:17121649/1‑35 (MQ=255) ggTGTCCGGCTTTTGCGCCTCTTTCATGTCGACCt > 1:14627395/1‑35 (MQ=255) gtgtCCGGCTTTTGCGCCTCTTTCATGTCGCCCtt < 1:18448361/35‑1 (MQ=255) gtgtCCGGCTTTTGCGCCTCTTTCATGTCGACCtt < 1:10275113/35‑1 (MQ=255) gtgtCCGGCTTTTGCGCCTCTTTCATGTCGACCtt < 1:17078475/35‑1 (MQ=255) gtgtCCGGCTTTTGCGCCTCTTTCATGTCGACCtt > 1:18541547/1‑35 (MQ=255) tgtCCGGCTTTTGCGCCTCTTTCATGTCGACCTTg > 1:16792668/1‑35 (MQ=255) tgtCCGGCTTTTGCGCCTCTTTCATGTCGACCTTg > 1:12675469/1‑35 (MQ=255) tgtACGGCTTTTGCGCCTCTTTCATGTCGACCTTg < 1:2510904/35‑1 (MQ=255) gtCCGGCTTTTGCGCCTCTTTCATGTCGACCTTgt < 1:5254794/35‑1 (MQ=255) gtCCGGCTTTTGCGCCTCTTTCATGTCGACCTTgt < 1:419931/35‑1 (MQ=255) gtCCGGCTTTTGCGCCTCTTTCATGTCGACCTTgt < 1:17958581/35‑1 (MQ=255) gtCCGGCTTTTGCGCCTCTTTCATGTCGACCTTgt < 1:7576348/35‑1 (MQ=255) gtCCGGCTTTTGCGCCTCTTTCATGTCGACCTTgt > 1:14626050/1‑35 (MQ=255) gtCCGGCTTTTGCGCCTCTTTCATGTCGACCTTgt < 1:9054008/35‑1 (MQ=255) tCCGGCTTTTGCGCCTCTTTCATGTAGACCTTgta < 1:11368496/35‑1 (MQ=255) ccGGCTTTTGCGCCTCTTTCATGTTGACCTTctag > 1:20526494/1‑35 (MQ=37) ccGGCTTTTGCGCCTCTTTCATGTCGACCTTgtag < 1:10945493/35‑1 (MQ=255) ccGGCTTTTGCGCCTCTTTCATGTCGACCTTgtag < 1:4260389/35‑1 (MQ=255) ccGGCTTTTGCGCCTCTTTCATGTCGACCTTgtag < 1:13264073/35‑1 (MQ=255) ccGGCTTTTGCGCCTCTTTCATGTCGACCTTgtag < 1:12566029/35‑1 (MQ=255) ccGGCTTTTGCGCCTCTTTCATGTCGACCTTgtag < 1:11246802/35‑1 (MQ=255) cggcttTTGCGCCTCTTTCATGTCGACCTTgtagt < 1:9618895‑M2/29‑1 (MQ=255) cggcttTTGCGCCTCTTTCATGTCGACCTTgtagt < 1:20261962‑M2/29‑1 (MQ=255) ggcttTTGCGCCTCTTTCATGTCGACCTTgtagta < 1:9929005‑M2/30‑1 (MQ=255) ggcttTTGCGCCTCTTTCATGTCGACCTTgtagta > 1:11107968‑M2/6‑35 (MQ=255) ggcttTTGCGCCTCTTTCATGTCGACCTTgtagta > 1:17621226‑M2/6‑35 (MQ=255) ggcttTTGCGCCTCTTTCATGTCGACCTTgtagta < 1:11862604‑M2/30‑1 (MQ=255) gcttTTGCGCCTCTTTCATGTCGACCTTGTAGTAt < 1:6140366‑M2/31‑1 (MQ=255) gcttTTGCGCCTCTTTCATGTCGACCTTGTAGTAt > 1:3818381‑M2/5‑35 (MQ=255) gcttCTGCGCCTCTTTCATGTCGACCTTGTAGTAt > 1:7668851‑M2/5‑35 (MQ=255) cttTTGCGCCTCTTTCATGTCGACCTTGTAGTAtt > 1:4617083‑M2/4‑35 (MQ=255) cttTTGCGCCTCTTTCATGTCGACCTTGTAGTAtt < 1:2256643‑M2/32‑1 (MQ=255) cttTTGCGCCTCTTTCATGTCGACCTTGTAGTAtt < 1:2395009‑M2/32‑1 (MQ=255) ttTTGCGCCTCTTTCATGTCGACCTTGTAGTAttt < 1:6951215‑M2/33‑1 (MQ=255) ttTTGCGCCTCTTTCATGTCGACCTTGTAGTAttt < 1:7746128‑M2/33‑1 (MQ=255) ttTTGCGCCTCTTTCATGTCGACCTTGTAGTAttt > 1:16756620‑M2/3‑35 (MQ=255) ttTTGCGCCTCTTTCATGTCGACCTTGTAGTAttt > 1:14292668‑M2/3‑35 (MQ=255) ttTTGCGCCTCTTTCATGTCGACCTTGTAGTAttt > 1:16026027‑M2/3‑35 (MQ=255) tTTGCGCCTCTTTCATGTCGACCTTGTAGTATTTa > 1:19858420‑M2/2‑35 (MQ=255) tTTGCGCCTCTTTCATGTCGACCTTGTAGTATTTa < 1:3750782‑M2/34‑1 (MQ=255) ttGCGCCTCTTTCATGTCGACCTTGTAGTATTTaa < 1:10357905/35‑1 (MQ=255) ttGCGCCTCTTTCATGTCGACCTTGTAGTATTTaa > 1:11922149/1‑35 (MQ=255) ttGCGCCTCTTTCATGTCGACCTTGTAGTATTTaa < 1:6436185/35‑1 (MQ=255) | CGTTAAAGGTGCGGTAGCTGGCGGTGTCCGGCTTTTGCGCCTCTTTCATGTCGACCTTGTAGTATTTAA > REL606/4368323‑4368391 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |