New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1133033 =122 (1.190)8 (0.100) 3/38 NT 9.4% coding (13/576 nt) yceI hypothetical protein
?REL606 = 2612120 57 (0.700)intergenic (‑323/+253) yfhK/purL predicted sensory kinase in two‑component system/phosphoribosylformylglycinamidine synthase

Only 100 of 222 total aligned reads displayed.

GAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGAT  >  REL606/1132999‑1133067
                                  |                                  
gagaACATCAGGGACGCGAAGGTTAAACCAAGCAg                                    <  1:13298141/35‑1 (MQ=255)
acgtactgattatacgttgctttgagggatttatg                                    <  1:15036953‑M1/1‑1 (MQ=255)
acgtactgattatacgttgctttgagggatttatg                                    <  1:2836218‑M1/1‑1 (MQ=255)
 cgtactgattatacgttgctttgagggatttatgg                                   <  1:15737597‑M1/2‑1 (MQ=255)
 cgtactgattatacgttgctttgagggatttatgg                                   >  1:10481415‑M1/34‑35 (MQ=255)
 cgtactgattatacgttgctttgagggatttatgg                                   >  1:9400984‑M1/34‑35 (MQ=255)
 cgtactgattatacgttgctttgagggatttatgg                                   <  1:10952557‑M1/2‑1 (MQ=255)
 cgtactgattatacgttgctttgagggatttatgg                                   >  1:12842782‑M1/34‑35 (MQ=255)
 cgtactgattatacgttgctttgagggatttatgg                                   >  1:1752569‑M1/34‑35 (MQ=255)
 cgtactgattatacgttgctttgagggatttatgg                                   >  1:19586340‑M1/34‑35 (MQ=255)
 agaACATCAGGGACGCGAAGGTTAAACCAAGCAgg                                   <  1:13264964/35‑1 (MQ=255)
 agaACATCAGGGACGCGAAGGTTAAACCAAGCAgg                                   >  1:17038035/1‑35 (MQ=255)
 agaACATCAGGGACGCGAAGGTTAAACCAAGCAgg                                   >  1:13312355/1‑35 (MQ=255)
 agaACATCAGGGACGCGAAGGTTAAACCAAGCAgg                                   <  1:20600916/35‑1 (MQ=255)
 agaACATCAGGGACGCGAAGGTTAAACCAAGCAgg                                   >  1:18610037/1‑35 (MQ=255)
  gtactgattatacgttgctttgagggatttatGGc                                  <  1:487955‑M1/3‑1 (MQ=255)
  gtactgattatacgttgctttgagggatttatGGc                                  <  1:8219795‑M1/3‑1 (MQ=255)
  gtactgattatacgttgctttgagggatttatGGc                                  <  1:15397599‑M1/3‑1 (MQ=255)
   tactgattatacgttgctttgagggatttatGGCt                                 >  1:16309802‑M1/32‑35 (MQ=255)
   tactgattatacgttgctttgagggatttatGGCt                                 <  1:12957898‑M1/4‑1 (MQ=255)
   aaCATCAGGGACGCGAAGGTTAAACCAAGCAGGCt                                 <  1:6111604/35‑1 (MQ=255)
   aaCATCAGGGACGCGAAGGTTAAACCAAGCAGGCt                                 <  1:7056662/35‑1 (MQ=255)
   aaCATCAGGGACGCGAAGGTTAAACCAAGCAGGCt                                 <  1:18303443/35‑1 (MQ=255)
    actgattatacgttgctttgagggatttatGGCtt                                >  1:12408233‑M1/31‑35 (MQ=255)
    actgattatacgttgctttgagggatttatGGCtt                                >  1:6948455‑M1/31‑35 (MQ=255)
    actgattatacgttgctttgagggatttatGGCtt                                >  1:16752180‑M1/31‑35 (MQ=255)
    actgattatacgttgctttgagggatttatGGCtt                                >  1:19992392‑M1/31‑35 (MQ=255)
    actgattatacgttgctttgagggatttatGGCtt                                <  1:19197076‑M1/5‑1 (MQ=255)
    actgattatacgttgctttgagggatttatGGCtt                                >  1:7545855‑M1/31‑35 (MQ=255)
    aCATCAGGGACGCGGAGGTTAAACCAAGCAGGCtt                                <  1:15863338/35‑1 (MQ=255)
    aCATCAGGGACGCGAAGGTTAAACCAAGCAGGCtt                                <  1:6236662/35‑1 (MQ=255)
     ctgattatacgttgctttgagggatttatGGCttt                               <  1:6413201‑M1/6‑1 (MQ=255)
     ctgattatacgttgctttgagggatttatGGCttt                               <  1:9495571‑M1/6‑1 (MQ=255)
     cATCATGGACGCGAAGGTTAAACCAAGCAGGCttt                               >  1:9643480/1‑35 (MQ=255)
     cATCAGGGACGCGAAGGTTAAACCAAGCAGGCttt                               <  1:152040/35‑1 (MQ=255)
     cATCAGGGACGCGAAGGTTAAACCAAGCAGGCttt                               <  1:5651113/35‑1 (MQ=255)
      aTCAGGGACGCGAAGGTTAAACCAAGCAGGCtttt                              >  1:2337601/1‑35 (MQ=255)
       tCAGGGACGCGAAGGTTAAACCAAGCAGGCttttt                             <  1:11628917/35‑1 (MQ=255)
       tCAGGGACGCGAAGGTTAAACCAAGCAGGCttttt                             <  1:19097766/35‑1 (MQ=255)
       gattatacgttgctttgagggatttatGGCttttt                             <  1:7326927‑M1/8‑1 (MQ=255)
        cAGGGACGCGAAGGTTAAACCAAGCAGGCtttttt                            <  1:2108560/35‑1 (MQ=255)
        cAGGGACGCGAAGGTTAAACCAAGCAGGCtttttt                            >  1:7347746/1‑35 (MQ=255)
         ttatacgttgctttgagggatttatGGCttttttt                           <  1:13190845‑M1/10‑1 (MQ=255)
         aGGGACTCGAAGGTTAAACCAAGCAGGCttttttt                           >  1:16463860/1‑35 (MQ=255)
         aGGGACGCGAAGGTTAAACCAAGCAGGCttttttt                           >  1:18825709/1‑35 (MQ=255)
         aGGGACGCGAAGGTTAAACCAAGCAGGCttttttt                           <  1:13809240/35‑1 (MQ=255)
         aGGGACGCGAAGGTTAAACCAAGCAGGCttttttt                           <  1:10200822/35‑1 (MQ=255)
           atacgttgctttgagggatttatGGCTTTTTTtct                         <  1:722542‑M1/12‑2 (MQ=255)
            gACGCGAAGGTTAAACCAAGCATGCTTTTTTTCAt                        >  1:11860679/1‑35 (MQ=255)
            gACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCAt                        <  1:19212951/35‑1 (MQ=255)
            gACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCAt                        <  1:16532471/35‑1 (MQ=255)
            gACGCGAGGTTAAACCAAGCAGGCTTTTTTTCAtt                       <  1:4152268/35‑1 (MQ=38)
             aCGCGAAGGTTAAACCAAGCAGGCTTTTTTTCAtt                       <  1:17698640/35‑1 (MQ=255)
             aCGCGAAGGTTAAACCAAGCAGGCTTTTTTTCAtt                       >  1:18055409/1‑35 (MQ=255)
              cgcgAAGGTTAAACCAAGCAGGCTTTTTTTCAttt                      <  1:11343273/35‑1 (MQ=255)
               gttgctttgagggatttatGGCTTTTTTTCCtttt                     <  1:3636938‑M1/16‑1 (MQ=255)
               gcgAAGTTTAAACCAAGCAGGCTTTTTTTCAtttt                     >  1:7992945/1‑35 (MQ=255)
               gcgAAGGTTAAACCAAGCAGGCTTTTTTTCAtttt                     <  1:10739616/35‑1 (MQ=255)
               gcgAAGGTTAAACCAAGCAGGCTTTTTTTCAtttt                     <  1:5557372/35‑1 (MQ=255)
                cgAAGGTTAAACCAAGCAGGCTTTTTTTCAttttt                    >  1:4715623/1‑35 (MQ=255)
                cgAAGGTTAAACCAAGCAGGCTTTTTTTCAttttt                    >  1:3933317/1‑35 (MQ=255)
                cgAAGGTTAAACCAAGCAGGCTTTTTTTCAttttt                    >  1:2788698/1‑35 (MQ=255)
                 gAAGGTTAAACCAAGCAGGCTTTTTTTCAtttttt                   >  1:11720785/1‑35 (MQ=255)
                 gAAGGTTAAACCAAGCAGGCTTTTTTTCAtttttt                   >  1:4800053/1‑35 (MQ=255)
                 gAAGGTTAAACCAAGCAGGCTTTTTTTCAtttttt                   >  1:18207934/1‑35 (MQ=255)
                  aaGGTTAAACCAAGCAGGCTTTTTTTTATTTTTta                  >  1:8724658/1‑35 (MQ=255)
                  aaGGTTAAACCAAGCAGGCTTTTTTTCATTTTTta                  <  1:20125142/35‑1 (MQ=255)
                  aaGGTTAAACCAAGCAGGCTTTTTTTCATTTTTta                  >  1:6601432/1‑35 (MQ=255)
                  aaGGTTAAACCAAGCAGGCTTTTTTTCATTTTTta                  >  1:3556943/1‑35 (MQ=255)
                   aGGTTAGACCAAGCAGGCTTTTTTTCATTTTTtat                 <  1:13411582/35‑1 (MQ=255)
                   aGGTTAAACCAAGCAGGCTTTTTTTCATTTTTtat                 <  1:19515214/35‑1 (MQ=255)
                    ggTTAAACCAAGCAGGCTTTTTTTCATTTTTtata                >  1:10341340/1‑35 (MQ=255)
                    ggTTAAACCAAGCAGGCTTTTTTTCATTTTTtata                >  1:7758619/1‑35 (MQ=255)
                    ggTTAAACCAAGCAGGCTTTTTTTCATTTTTtata                <  1:5242056/35‑1 (MQ=255)
                     gTTAAACCAAGCAGGCTTTTTTTCATTTTTTATAc               <  1:5971904/35‑1 (MQ=255)
                     gTTAAACCAAGCAGGCTTTTTTTCATTTTTTATAc               >  1:5483686/1‑35 (MQ=255)
                      ttAAACCAAGCAGGCTTTTTTTCATTTTTTATACt              <  1:13836267/35‑1 (MQ=255)
                       tAAACCAAGCAGGCTTTTTTTCATTTTTTATACTc             <  1:2574054/35‑1 (MQ=255)
                        aaaCCAAGCAGGCTTTTTTTCATTTTTTATACTcc            <  1:11030618/35‑1 (MQ=255)
                        aaaCCAAGCAGGCTTTTTTTCATTTTTTATACTcc            <  1:5679991/35‑1 (MQ=255)
                        aaaCCAAGCAGGCTTTTTTTCATTTTTTATAATcc            <  1:11901012/35‑1 (MQ=255)
                         aaCCAAGCAGGCTTTTTTTCATTTTTTATACTCCa           <  1:6655828/35‑1 (MQ=255)
                          aCCAAGCAGGCTTTTTTTCATTTTTTATACTCCAt          >  1:12031888/1‑35 (MQ=255)
                           ccAAGCAGGCTTTTTTTCATTTTTTATACTCCATa         >  1:9278169/1‑35 (MQ=255)
                           ccAAGCAGGCTTTTTTTCATTTTTTATACTCCATa         <  1:12194879/35‑1 (MQ=255)
                           ccAAGCAGGCTTTTTTTCATTTTTTATACTCCATa         <  1:11448323/35‑1 (MQ=255)
                            cAAGCAGGCTTTTTTTCATTTTTTATCCTCCATAg        <  1:3589787/35‑1 (MQ=255)
                            cAAGCAGGCTTTTTTTCATTTTTTATACTCCAtgg        <  1:20467269/35‑3 (MQ=255)
                            cAAGCAGGCTTTTTTTCATTTTTTATACTCCATAg        >  1:17319471/1‑35 (MQ=255)
                            cAAGCAGGCTTTTTTTCATTTTTTATACTCCATAg        >  1:5101568/1‑35 (MQ=255)
                             aaGCAGGCTTTTTTTCATTTTTTATACTCCATAGt       <  1:13711055/35‑1 (MQ=255)
                             aaGCAGGCTTTTTTTCATTTTTTATACTCCATAGt       >  1:2428588/1‑35 (MQ=255)
                             aaGCAGGCTTTTTTTCATTTTTTATACTCCATAGt       >  1:6179697/1‑35 (MQ=255)
                             aaGCAGGCTTTTTTTCATTTTTTATACTCCATAGt       >  1:12550908/1‑35 (MQ=255)
                             aaGCAGGCTTTTTTTCATTTTTTATACTCCATAGt       >  1:14162911/1‑35 (MQ=255)
                              aGCAGGCTTTTTTTCATTTTTTATACTCCATAGTc      >  1:14548424/1‑35 (MQ=255)
                                cAGGCTTTTTTTCATTTTTTATACTCCATAGTCAg    >  1:7422278/1‑35 (MQ=255)
                                cAGGCTTTTTTTCATTTTTTATACTCCATAGTCAg    >  1:17014641/1‑35 (MQ=255)
                                 aGGCTTTTTTTCATTTTTTATACTCCATAGTCAGa   <  1:20156733/35‑1 (MQ=255)
                                 aGGCTTTTTTTCATTTTTTATACTCCATAGTCAGa   <  1:20439908/35‑1 (MQ=255)
                                  |                                  
GAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGAT  >  REL606/1132999‑1133067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.