New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2019883 | 85 (0.830) | 18 (0.210) | 5/40 | NT | 23.7% | intergenic (‑312/‑115) | yeeZ/hisL | predicted epimerase, with NAD(P)‑binding Rossmann‑fold domain/his operon leader peptide |
? | REL606 | = 3163334 | 45 (0.530) | coding (1630/2352 nt) | ygjK | predicted glycosyl hydrolase |
TTCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2019846‑2019883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcCATTAGCGACATATTTATCCAACTGTTCTTTGTC < REL606/3163334‑3163301 TTCTAATGTAGTCACTCCAGGCCCCCTCCTTTCCC < 1:22155/35‑1 TTCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCC > 1:10656635/1‑35 TTCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCC < 1:8911490/35‑1 TCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCC < 1:9598050/35‑1 TCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCC > 1:6145436/1‑35 TCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCC > 1:4841870/1‑35 TCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCC > 1:18805003/1‑35 TCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCC < 1:12247593/35‑1 CTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCG > 1:3058704/1‑35 CTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCG > 1:10787561/1‑35 CTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCG < 1:2585075/35‑1 CTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCG > 1:19782652/1‑35 CTAACGTAGTCACTCCAGGCCCCCTACTTTCCCCG < 1:18189098/35‑1 TAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCGC < 1:16037514/35‑1 tCCCCTCCTTTCCCCGCCATTAGCGACATATTTAT < 1:18046928/34‑1 gtCCCTCCTTTCCCCGCCATTAGCGACATATTTAT < 1:7441400/33‑1 CCCCCTCCTTTCCCCGCCATTAGCGACATATTTAT < 1:5701223/35‑1 CCCTCCTTTCCCCGCCATTAGCGACATATTTATCC < 1:6876927/35‑1 CCTTCTTTCCCCGCCATTAGCGACATATTTATCCA < 1:6544524/35‑1 cttCTTTCCCCGCCATTAGCGACATATTTATCCAA < 1:14248138/32‑1 cttCTTTCCCCGCCATTAGCGACATATTTATCCAA < 1:11308081/32‑1 tCTTGCCCCGCCATTAGCGACATATTTATCCAACT < 1:14466506/34‑1 gtTTTCCCCGCCATTAGCGACATATTTATCCAACT < 1:10523507/33‑1 gCTTCCCCCGCCATTAGCGACATATTTATCCAACT < 1:15594047/34‑1 ccgTTCCCCGCCATTAGCGACATATTTATCCAACT < 1:6474337/32‑1 aCTTTCGCCGCCATTAGCGACATATTTATCCAACT < 1:17014382/34‑1 CCTTTCCCCGCCATTAGCGACATATTTATCCAACT < 1:896361/35‑1 CCTTTCCCCGCCATTAGCGACATATTTATCCAACT < 1:3179300/35‑1 CCTTTCCCCGCCATTAGCGACATATTTATCCAACT < 1:3990170/35‑1 CCTTCCCCCGCCATTAGCGACATATTTATCCAACT < 1:13006010/35‑1 CTTTCCCCGCCATTAGCGACATATTTATCCAACTG < 1:6179572/35‑1 CTTTCCCCGCCATTAGCGACATATTTATCCAACTG < 1:7076052/35‑1 CTTTCCCCGCCATTAGCGACATATTTATACAACTG < 1:6898178/35‑1 CTTCCCCCGCCATTAGCGACATATTTATCCAACTG < 1:18648044/35‑1 ttcCCCCGCCATTAGCGACATATTTATCCAACTGT < 1:17638859/32‑1 ttcCCCCGCCATTAGCGACATATTTATCCAACTGT < 1:1086139/32‑1 ttcCCCCGCCATTAGCGACATATTTATCCAACTGT < 1:4611032/32‑1 ttcCCCCGCCATTAGCGACATATTTATCCAACTGT < 1:20292850/32‑1 tccCCCCGCCATTAGCGACATATTTATCCAACTGT < 1:4381117/32‑1 gTTCCCCGCCATTAGCGACATATTTATCAAACTGT < 1:5647528/34‑1 TTTCCCCGCCATTAGCGACATATTTATCCAACTGT < 1:13176827/35‑1 TTTCCCCGCCATTAGCGACATATTTATCCAACTGT < 1:9447217/35‑1 TTTCCCCGCCATTAGCGACATATTTATCCAACTGT < 1:16662287/35‑1 TTTCCCCGCCATTAGCGACATATTTATCCAACTGT < 1:5680895/35‑1 tcCCCCGCCATTAGCGACATATTTATCCAACTGTT < 1:14738577/33‑1 TTCCCCGCCATTAGCTACATATTTATCCAACTGTT < 1:2424445/35‑1 TTCCCCGCCATTAGCGACATATTTATCCAACTGTT < 1:1561599/35‑1 TTCCCCGCCATTAGCGACATATTTATCCAACTGTT < 1:13746485/35‑1 ctCCCGCCATTAGCGACATATTTATCCAACTGTTC < 1:18066340/33‑1 TCCCCGCCATTAGCGACATATTTATCCAACTGTTC < 1:14108780/35‑1 TCCCCGCCATTAGCGACATATTTATCCAACTGTTC < 1:7197033/35‑1 CCCCGCCATTAGCGACATATTTATCCAACTGTTCT < 1:2351382/35‑1 CCCCGCCATTAGCGACATATTTATCCAACTGTTCT < 1:20608701/35‑1 CCCCGCCATTAGCGACATATTTATCCAACTGTTCT < 1:4098559/35‑1 CCCCGCCATTAGCGACATATTTATCCAACTGTTCT < 1:18091760/35‑1 CCCCGCCATTAGCGACATATTTATCCAACTGTTCT < 1:15809753/35‑1 CCCGCCATTAGCGACATATTTATCCAACTGTTCTT < 1:10580929/35‑1 CCCGCCATTAGCGACATATTTATCCAACTGTTCTT < 1:14275984/35‑1 CCCGCCATTAGCGACATATTTATCCAACTGTTCTT < 1:13721635/35‑1 CCGCCATTATCGACATATTTATCCAACTGTTCTTT > 1:2717987/1‑35 CCGCCATTAGCGACATATTTATCCAACTGTTCTTT > 1:5845234/1‑35 CCGCCATTAGCGACATATTTATCCAACTGTTCTTT > 1:8493560/1‑35 CCGCCATTAGCGACATATTTATCCAACTGTTCTTT < 1:8176902/35‑1 CCGCCATTAGCGACATATTTATCCAACTGTTCTTT < 1:7630674/35‑1 CCGCCATTAGCGACATATTTATCCAACTGTTCTTT < 1:17932154/35‑1 CCGCCATTAGCGACATATTTATCCAACTGTTCTTT < 1:11261844/35‑1 CCGCCATTAGCGACATATTTATCCAACTGTTCTTT < 1:9316605/35‑1 CGCCATTAGCGACATATTTATCCAACTGTTCTTTG < 1:10419128/35‑1 CGCCATTAGCGACATATTTATCCAACTGTTCTTTG > 1:10522470/1‑35 CGCCATTAGCGACATATTTATCCAACTGTTCTTTG < 1:17006813/35‑1 CGCCATTAGCGACATATTTATCCAACTGTTCTTTG < 1:18125586/35‑1 CGCCATTAGCGACATATTTATCCAACTGTTCTTTG < 1:20371265/35‑1 CGCCATTAGCGACATATTTATCCAACTGTTCTTTG < 1:6052453/35‑1 GCCATTAGCGACATATTTATCCAACTGTTCTTTGT < 1:1985639/35‑1 GCCATTAGCGACATATTTATCCAACTGTTCTTTGT > 1:17799449/1‑35 GCCATTAGCGACATATTTATCCAACTGTTCTTTGT < 1:5413815/35‑1 CCATTAGCGACATATTTATCCAACTGTTCTTTGTC < 1:3567154/35‑1 CCATTAGCGACATATTTATCCAACTGTTCTTTGTC < 1:19414082/35‑1 CCATTAGCGACATATTTATCCAACTGTTCTTTGTC > 1:1908858/1‑35 CCATTAGCGACATATTTATCCAACTGTTCTTTGTC < 1:7253454/35‑1 CCATTAGCGACATATTTATCCAACTGTTCTTTGTC < 1:4415774/35‑1 CCATTAGCGACATATTTATCCAACTGTTCTTTGTC < 1:17610270/35‑1 CCATTAGCGACATATTTATCCAACTGTTCTTTGTC < 1:17461153/35‑1 CCATTAGCGACATATTTATCCAACTGTTCTTTGTC < 1:4440837/35‑1 CCATTAGCGACATATTTATCCAACTGTTCTTTGTC < 1:16753407/35‑1 CCATTAGCGACATATTTATCCAACTGTTCTTTGTC < 1:10983041/35‑1 TTCTAACGTAGTCACTCCAGGCCCCCTCCTTTCCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2019846‑2019883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcCATTAGCGACATATTTATCCAACTGTTCTTTGTC < REL606/3163334‑3163301 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |