New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1036071 | 104 (1.010) | 18 (0.180) | 6/46 | NT | 17.6% | intergenic (+43/+33) | ycbG/ompA | hypothetical protein/outer membrane protein A (3a;II*;G;d) |
? | REL606 | = 2316746 | 69 (0.700) | coding (216/891 nt) | yfbH | hypothetical protein |
Only 100 of 224 total aligned reads displayed.
AGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTT > REL606/1036037‑1036105 | cgaggttgccacaatgcggctaaAAAAAAAAaccc < 1:13993658‑M1/12‑1 (MQ=255) aGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCC < 1:16973270‑M1/35‑1 (MQ=255) aGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCC < 1:19956978‑M1/35‑1 (MQ=255) aGTAAGTTCAATTTACTAAAGGCAAAAAAAACCCC < 1:20563512‑M1/35‑1 (MQ=255) aggttgccacaatgcggctaaAAAAAAATCCCCgc < 1:7984060‑M1/14‑1 (MQ=255) ggttgccacaatgcggctaaAAAAAAAACCCcgcg < 1:8441329‑M1/15‑2 (MQ=255) cAGTTCAATTTACTAAAGGCAAAAAAAACCCCgca > 1:14209868/1‑35 (MQ=255) aaGTTCAATTTACTAAAGGCAAAAAAAACCCCgca < 1:12478444/34‑1 (MQ=255) aGTTCAATTTACTAAAGGCAAAAAAAACCCCgcag > 1:11379077/1‑35 (MQ=255) aGTTCAATTTACTAAAGGCAAAAAAAACCCCgcag > 1:16639227/1‑35 (MQ=255) aGTTCAATTTACTAAAGGCAAAAAAAACCCCgcag > 1:16873241/1‑35 (MQ=255) ttgccacaatgcggctaaAAAAAAAACcccgcggg < 1:13519580‑M1/17‑4 (MQ=255) ttgccacaatgcggctaaAAAAAAAACcccgcggc < 1:9598511‑M1/17‑4 (MQ=255) ttgccacaatgcggctaaAAAAAAAACcccgccgg < 1:5371146‑M1/17‑4 (MQ=255) gTTCAATTTACTAAAGGCAAAAAAAACCCCgcagc > 1:16418169/1‑35 (MQ=255) gTTCAATTTACTAAAGGCAAAAAAAACCCCgcagc > 1:5097525/1‑35 (MQ=255) gTTCAATTTACTAAAGGCAAAAAAAACCCCgcagc < 1:3761958/35‑1 (MQ=255) ttCAATTTACTAAAGGCAAAAAAAACCCCgcagca < 1:12200025/35‑1 (MQ=255) ttCAATTTACTAAAGGCAAAAAAAACCCCgcagca < 1:7883378/35‑1 (MQ=255) tCAATTTACTAGAGGCAAAAAAAACCCCGcagcag > 1:6259066/1‑35 (MQ=255) tCAATTTACTAAAGGCAAAAAAAACCCCGcagcag > 1:13855601/1‑35 (MQ=255) tCAATTTACTAAAGGCAAAAAAAACCCCGcagcag > 1:4403629/1‑35 (MQ=255) cAATTTCCAAAAGGAAAAAAAACCCCCGCagcagc < 1:18657580/35‑1 (MQ=19) cAATTTACTAAAGGCAAAAAAAACCCCGCagcagc < 1:15224963/35‑1 (MQ=255) aaTTTACTAAAGGCAAAAAAAACACCGCAGCAGCg < 1:803175/35‑1 (MQ=255) aTTTACTAAAGGCAAAAAAAACCCCGCAGCAGCgg > 1:6104314/1‑35 (MQ=255) aTTTACTAAAGGCAAAAAAAACCCCGCAGCAGCgg > 1:5154779/1‑35 (MQ=255) aTTTACTAAAGGCAAAAAAAACCCCGCAGCAGCgg > 1:2755253/1‑35 (MQ=255) aTTTACTAAAGGCAAAAAAAACCCCGCAGCAGCgg > 1:3910496/1‑35 (MQ=255) tttACTAAAGGCAAAAAAAACCCCGCAGCAGCggg > 1:20420935/1‑35 (MQ=255) tttACTAAAGGCAAAAAAAACCCCGCAGCAGCggg < 1:1309313/35‑1 (MQ=255) tttACTAAAGGCAAAAAAAACCCCGCAGCAGCggg > 1:4749420/1‑35 (MQ=255) tACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGt > 1:14398195/1‑35 (MQ=255) tACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGt > 1:18383979/1‑35 (MQ=255) tACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGt > 1:11089236/1‑35 (MQ=255) aCTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGtt < 1:15888722/35‑1 (MQ=255) cTAAAGGCAAAAAAAACCCCGCAGCAGCGTGGgtt > 1:9784866/1‑35 (MQ=37) cTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGttt < 1:8295419/35‑1 (MQ=255) cTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGttt > 1:19113832/1‑35 (MQ=255) tAAAGGCAAAAAAATCCCCGCAGCAGCGGGGtttt < 1:20038400/35‑1 (MQ=255) tAAAGGCAAAAAAAACCCCGCAGCAGCGGGGtttt > 1:10047213/1‑35 (MQ=255) tAAAGGCAAAAAAAACCCCGAAGCAGCGGGGtttt < 1:13300148/35‑1 (MQ=255) aaaGGCAAAAAAAACCCCGCAGCAGCGGGGttttt > 1:14576198/1‑35 (MQ=255) aaaGGCAAAAAAAACCCCGCAGCAGCGGGGttttt < 1:6719121/35‑1 (MQ=255) aaGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTc > 1:13913022/1‑35 (MQ=255) aaGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTc < 1:2377649/35‑1 (MQ=255) ccgcaAAAAAAACCCCccagccataaagcgatgcc < 1:10323102‑M1/33‑20 (MQ=255) aGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCt < 1:3333535/35‑1 (MQ=255) ggCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTa > 1:6129370/1‑35 (MQ=255) gCAAAAAAAACCCCagccgcgcggcgcaggtgaag < 1:8829321‑M1/35‑22 (MQ=255) acaAAAAAAACCCCccagccataaagcgatgccgc < 1:10539573‑M1/34‑22 (MQ=255) cAAAAAAAACCCCagccgcgcggcgcaggtgaagt < 1:8264588‑M1/35‑23 (MQ=255) cAAAAAAAACCCCagccgcgcggcgcaggtgaagt < 1:18229389‑M1/35‑23 (MQ=255) cAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTAcc > 1:10318546/1‑35 (MQ=255) cAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTAcc > 1:4681299/1‑35 (MQ=255) aaaaaaaaCCCCagccgcgcggcgcaggtgaagtg < 1:8983058‑M1/35‑24 (MQ=255) aaaaaaaaCCCCagccgcgcggcgcaggtgaagtg < 1:4902896‑M1/35‑24 (MQ=255) aaaaaaaaCCCCGCAGCAGCGGGGTTTTTCTACCa < 1:16044588/35‑1 (MQ=255) aaaaaaaaCCCCGCAGCAGCGGGGTTTTTCTACCa > 1:18314026/1‑35 (MQ=255) aaaaaaaaCCCCGCAGCAGCGGGGTTTTTCTACCa > 1:3040645/1‑35 (MQ=255) aaaaaaaaCCCCGCAGCAGCGGGGTTTTTCTACCa > 1:9689606/1‑35 (MQ=255) aaaaaaaCCCCGCAGCAGCGGGGTTTTTCTACCAg > 1:9332347/1‑35 (MQ=255) aaaaaaaCCCCGCAGCAGCGGGGTTTTTCTACCAg < 1:16842969/35‑1 (MQ=255) aaaaacCCCCagccgcgcggcgcaggtgaagtgac < 1:6483821‑M1/35‑26 (MQ=255) aaaaaaTCCCccagccataaagcgatgccgcgttt < 1:5927032‑M1/35‑26 (MQ=255) aaaaaaCCCCccagccataaagcgatgccgcgttt < 1:3426826‑M1/35‑26 (MQ=255) aaaaaaCCCCccagccataaagcgatgccgcgttt < 1:13124348‑M1/35‑26 (MQ=255) aaaaaCCCCccagccataaagcgatgccgcgtttg < 1:7713578‑M1/35‑27 (MQ=255) aaaaaCCCCGCAGCAGCGGGGTTTTTCTACCAGAc > 1:19517578/1‑35 (MQ=255) aaaaaCCCCGCAGCAGCGGGGTTTTTCTACCAGAc > 1:13623803/1‑35 (MQ=255) aaaaaCCCCGCAGCAGCGGGGTTTATCTACCAGAc > 1:1254785/1‑35 (MQ=255) aaaaCCCCccagccataaagcgatgccgcgtttga < 1:3697308‑M1/35‑28 (MQ=255) aaaaCCCCGCAGCAGCGGGGTTTTTCTACCAGACg < 1:20381588/35‑1 (MQ=255) aaaaCCCCGCAGCAGCGGGGTTTTTCTACCAGACg < 1:20482619/35‑1 (MQ=255) aaaCCCCGCAGCAGCGGGGTTTTTCTACCAGACga < 1:221169/35‑1 (MQ=255) ccccccagccgcgcggcgcaggtgaagtgacgatt < 1:8599492‑M1/33‑30 (MQ=255) actcccccagccataaagcgatgccgcgtttgagc < 1:18782504‑M1/32‑30 (MQ=255) aatcccccagccataaagcgatgccgcgtttgagc < 1:10745308‑M1/32‑30 (MQ=255) aaCCCCGCAGCAGCGGGGTTTTTCTACCAGACgag > 1:14958006/1‑35 (MQ=255) aaCCCCGCAGCAGCGGGGTTTTTCTACCAGACgag > 1:15450368/1‑35 (MQ=255) aaCCCCGCAGCAGCGGGGTTTTTCTACCAGACgag > 1:693185/1‑35 (MQ=255) cccccagccgcgcggcgcaggtgaagtgacgatta < 1:3616404‑M1/34‑31 (MQ=255) cccccGCAGCAGCGGGGTTTTTCTACCAGACgaga < 1:7440704/34‑1 (MQ=255) aCCCCccagccataaagcgatgccgcgtttgagcg < 1:14502340‑M1/35‑31 (MQ=255) aCCCCGCAGCAGCGGGGTTTTTCTACCAGACgaga > 1:4349079/1‑35 (MQ=255) ccccccagccataaagcgatgccgcgtttgagcgc < 1:3436941‑M1/35‑32 (MQ=255) ccccagccgcgcggcgcaggtgaagtgacgattat < 1:11496360‑M1/35‑32 (MQ=255) ccccGCAGCAGCGGGGTTTTTCTACCAGACGAGaa < 1:17054161/35‑1 (MQ=255) ccccGCAGCAGCGGGGTTTTTCTACCAGACGAGaa < 1:17417374/35‑1 (MQ=255) cccccagccataaagcgatgccgcgtttgagcgca < 1:9742113‑M1/35‑33 (MQ=255) cccccagccataaagcgatgccgcgtttgagcgca < 1:16483554‑M1/35‑33 (MQ=255) cccccagccataaagcgatgccgcgtttgagcgca < 1:4147445‑M1/35‑33 (MQ=255) ccccagccataaagcgatgccgcgtttgagcgcag < 1:12959373‑M1/35‑34 (MQ=255) ccccagccataaagcgatgccgcgtttgagcgcag < 1:1092614‑M1/35‑34 (MQ=255) ccagccgcgcggcgcaggtgaagtgacgattatcg < 1:16706219‑M1/35‑34 (MQ=255) cccagccataaagcgatgccgcgtttgagcgcagc < 1:9172959‑M1/35‑35 (MQ=255) cccagccataaagcgatgccgcgtttgagcgcagc < 1:13701810‑M1/35‑35 (MQ=255) cccagccataaagcgatgccgcgtttgagcgcagc < 1:1445528‑M1/35‑35 (MQ=255) cGCAGCAGCGGGGTTTTTCTACCAGACGAGAACtt < 1:19629538/35‑1 (MQ=255) cGCAGCAGCGGGGTTTTTCTACCAGACGAGAACtt < 1:17660567/35‑1 (MQ=255) | AGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTT > REL606/1036037‑1036105 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |