New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 13453 = | 80 (0.780) | 8 (0.080) | 4/44 | NT | 10.6% | coding (1293/1917 nt) | dnaK | molecular chaperone DnaK |
? | REL606 | 348289 = | 62 (0.660) | coding (475/1212 nt) | mhpT | predicted 3‑hydroxyphenylpropionic transporter |
Only 100 of 146 total aligned reads displayed.
TGTTCCCATTGGCGCGGCGCTGGCGGCGACA‑CTGGGTTTCGCGGGGGCAAACTTAGCATGGCAAACGGT > REL606/348255‑348323 | tgtTCCCATTGGCGCGGCGCTGGCGGGGACA‑CTgg > 1:18491235/1‑35 (MQ=255) tgtTCCCATTGGCGCGGCGCTGGCGGCGACA‑CTgg < 1:3881295/35‑1 (MQ=255) tgtTCCCATTGGCGCGGCGCTGGCGGCGACA‑CTgg < 1:11359742/35‑1 (MQ=255) gtTCCCATTGGCGCGGCGCTGGCGGGGGCA‑CTggg > 1:13508733/1‑35 (MQ=25) gtTCCCATTGGCGCGGCGCTGGCGGCGACA‑CTggg < 1:3648538/35‑1 (MQ=255) gtTCCCATTGGCGCGGCGCTGGCGGCGACA‑CTggg < 1:11489568/35‑1 (MQ=255) gtTCCCATTGGCGCGGCGCCGGCGGCGACA‑CTggg < 1:9380792/35‑1 (MQ=255) ctgcagcacatggatggttaccgcagactggttgg > 1:2153666‑M2/35‑35 (MQ=255) ctgcagcacatggatggttaccgcagactggttgg > 1:9127114‑M2/35‑35 (MQ=255) ctgcagcacatggatggttaccgcagactggttgg > 1:9451464‑M2/35‑35 (MQ=255) ttCCCATTGGCGCGGCGCTGGCGGCGACT‑CTgggg > 1:9821051/1‑34 (MQ=255) tgcagcacatggatggttaccgcagactggttggg > 1:6538892‑M2/34‑35 (MQ=255) tgcagcacatggatggttaccgcagactgggtggg > 1:4528615‑M2/34‑35 (MQ=255) tCCCATTGGCGCGGCGCTGGCGGGGGCA‑CTggggt > 1:13783577/1‑33 (MQ=25) tCCCATTGGCGCGGCGCTGGCGGGGGCA‑CCggggt > 1:1106666/1‑33 (MQ=18) tCCCATTGGCGCGGCGCTGGCGGCGACA‑CTGGGtt < 1:7841241/35‑1 (MQ=255) tCCCATTGGAGCGGCGCTGGCGGCGACA‑CTGGGtt < 1:17116714/35‑1 (MQ=255) gcagcacatggatggttaccgcagactggttgGGt > 1:13332162‑M2/33‑35 (MQ=255) cccATTGGCGCGGCGCTGGCGGCGACA‑CTGGGttt < 1:13684645/35‑1 (MQ=255) cagcacatggatggttaccgcagactggttgggct > 1:1486835‑M2/32‑33 (MQ=255) cagcacatggatggttaccgcagactggttgGGtt > 1:17167701‑M2/32‑35 (MQ=255) cagcacatggatggttaccgcagactggttgGGtt > 1:19286405‑M2/32‑35 (MQ=255) agcacatggatggttaccgcagactggttgGgttc > 1:13714106‑M2/31‑34 (MQ=255) cATTGGCGCGGCGCTGGCGGGGGCACCTGGGtttg > 1:7993658/1‑34 (MQ=12) cATTGGCGCGGCGCTGGCGGCGACA‑CTGGGTTTcg < 1:8086219/35‑1 (MQ=255) cATTGGCGCGGCGCTGGCGGCGACA‑CTGGGTTTcg < 1:20141982/35‑1 (MQ=255) cATTGGCGCGCCGCTGGCGGCGACA‑CTGGGTTTcg < 1:14500007/35‑1 (MQ=255) cacatggatggttaccgcagactggttgggttttt > 1:1459888‑M2/29‑33 (MQ=255) atgggcgcggcgcTGGCGGCGACA‑CTGGGTTTcgc < 1:12928413/32‑1 (MQ=255) aTTGGCGCGGCGCTGGCGGCGACA‑CTGGGTTTcgc < 1:8763868/35‑1 (MQ=255) ttGGCGCGGCGCTGGCGGCGACA‑CTGGGTTTcgcg < 1:508092/35‑1 (MQ=255) ttGGCGCGGCGCTGGCGGCGACA‑CTGGGTTTcgcg < 1:3745648/35‑1 (MQ=255) ttGGCGCGGCGCTGGCGGCGACA‑CTGGGTTTcgcg < 1:18916907/35‑1 (MQ=255) acatggatggttaccgcagactggttgggtttacc > 1:20574339‑M2/28‑32 (MQ=255) acatggatggttaccgcagactggttgGGTTTcgc > 1:11981340‑M2/28‑35 (MQ=255) acatggatggttaccgcagactggttgGGTTTcgc > 1:15325084‑M2/28‑35 (MQ=255) acatggatggttaccgcagactggttgGGTTCcgc > 1:11921722‑M2/28‑35 (MQ=255) tGGCGCGGCGCTGGCGGCGACA‑CTGGGTTTCGCgg < 1:12325904/35‑1 (MQ=255) gggcgcggcgcTGGCGGCGACA‑CTGGGTTTCGCgg < 1:12559637/34‑1 (MQ=255) tggatggttaccgcagactggttgGGTTTCGCggg > 1:5906861‑M2/25‑35 (MQ=255) ggatggttaccgcagactggttgGGTTTCGCgggg > 1:8985988‑M2/24‑35 (MQ=255) gcggcgcTGGCGGCGACA‑CTGGGTTTCGCGGGGGc < 1:7736133/35‑1 (MQ=255) gcggcgcTGGCGGCGACA‑CTGGGTTTCGCGGGGGc < 1:2579203/35‑1 (MQ=255) cggcgcTGGCGGCGACA‑CTGGGTTTCGCGGGGGCa < 1:4066417/35‑1 (MQ=255) tggttaccgcagactggttgGGTTTCgcgggggag > 1:1791925‑M2/21‑33 (MQ=255) ggcgcTGGCGGCGACA‑CTGGGTTTCGCGGGGGCaa < 1:20275570/35‑1 (MQ=255) gcgcTGGCGGCGACA‑CTGGGTTTCGCGGGGGCaaa < 1:18049582/35‑1 (MQ=255) gcgcTGGCGGCGACA‑CTGGGTTTCGCGGGGGCaaa < 1:1257112/35‑1 (MQ=255) gcgcTGGCGGCGACA‑CTGGGTTTCGCGGGGGCaaa < 1:18732982/35‑1 (MQ=255) gcgcTGGCGGCGACA‑CTGGGTTTCGCGGGGGCaaa < 1:13839054/35‑1 (MQ=255) gcgggcggcGACA‑CTGGGTTTCGCGGGGGCAAACt < 1:16541637/32‑1 (MQ=255) gcTGGCGGCGACA‑CTGGGTTTCGCGGGGGCAAACt < 1:8768412/35‑1 (MQ=255) gcTGGCGGCGACA‑CTGGGTTTCGCGGGGGCAAACt < 1:19957854/35‑1 (MQ=255) cTGGCGGCGACA‑CTGGGTTTCGCGGGGGCAAACtt > 1:16283371/1‑35 (MQ=255) cTGGCGGCGACA‑CTGGGTTTCGCGGGGGCAAACtt < 1:8994924/35‑1 (MQ=255) tGGCGGCGACA‑CTGGGTTTCGCGGGGGCAAACTTa < 1:19566794/35‑1 (MQ=255) tGGCGGCGACA‑CTGGGTTTCGCGGGGGCAAACTTa < 1:16240790/35‑1 (MQ=255) tGGCGGCGACA‑CTGGGTTTCGCGGGGGCAAACTTa < 1:12754116/35‑1 (MQ=255) tGGCGGCGACA‑CTGGGGTTCGCGGGGGCAAACTTa > 1:18860233/1‑35 (MQ=255) ggcggcGACA‑CTGGGTTTCGCGGGGGCAAACTTAg < 1:4776853/35‑1 (MQ=255) ggcggcGACA‑CTGGGTTTCGCGGGGGCAAACTTAg > 1:6110376/1‑35 (MQ=255) ggcggcGACA‑CTGGGTTTCGCGGGGGCAAACTTAg < 1:9519450/35‑1 (MQ=255) ggcggcGACA‑CTGGGTTTCGCGGGGGCAAACTTAg > 1:12990890/1‑35 (MQ=255) ggcggcGACA‑CTGGGGTTCGCGGGGGCAAACTTAg > 1:1448183/1‑35 (MQ=255) gcggcgACA‑CTGGGTTTCGCGGGGGCAAACTTAGc < 1:4681917/35‑1 (MQ=255) gcggcgACA‑CTGGGTTTCGCGGGGGCAAACTTAGc > 1:13879691/1‑35 (MQ=255) gcggcgACA‑CTGGGTTTCGCGGGGGCAAACTTAGc < 1:11724280/35‑1 (MQ=255) cggcgACA‑CTGGGTTTCGCGGGGGCAAACTTAGCn > 1:10252311/1‑35 (MQ=255) cggcgACA‑CTGGGTTTCGCGGGGGCAAACTTAGCa < 1:18537006/35‑1 (MQ=255) ggcgACA‑CTGGGTTTCGCGGGGGCAAACTTAGCAt > 1:9197921/1‑35 (MQ=255) ggcgACA‑CTGGGTTTCGCGGGGGCAAACTTAGCAt > 1:9089827/1‑35 (MQ=255) gcgAAA‑CTGGGTTTCGCGGGGGCAAACTTAGCATg < 1:8423280/35‑1 (MQ=255) cgACA‑CTGGGTTTCGCGGGGGCAAACTTAGCATgg < 1:2711634/35‑1 (MQ=255) cgACA‑CTGGGTTTCGCGGGGGCAAACTTAGCATgg < 1:14622388/35‑1 (MQ=255) cgACA‑CTGGGCTTCGCGGGGGCAAACTTAGCCTgc > 1:3242114/1‑34 (MQ=25) gACA‑CTGGGTTTCGCGGGGGCAAACTTAGCATTGc > 1:13064243/1‑35 (MQ=255) gACA‑CTGGGTTTCGCGGGGGCAAACTTAGCATGGc < 1:12388649/35‑1 (MQ=255) gACA‑CTGGGTTTCGCGGGGGCAAACTTAGCATGGc > 1:19719289/1‑35 (MQ=255) gACA‑CTGGGTTTCGCGGGGGCAAACTTAGCATGGc < 1:932814/35‑1 (MQ=255) aca‑cTTGGTTTCGCGGGGGCAAACTTAGCATGGCa > 1:12604801/1‑35 (MQ=255) aca‑cTGGGTTTCGCGGGGGCAAACTTAGCATGGCa < 1:836059/35‑1 (MQ=255) aca‑cTGGGTTTCGCGGGGGCAAACTTAGCATGGCa < 1:15052850/35‑1 (MQ=255) aca‑cTGGGTTTCGCGGGGGCAAACTTAGCATGGCa > 1:15295292/1‑35 (MQ=255) ca‑cTGGGTTTCGCGGGGGCAAACTTAGCATGGCaa < 1:12407915/35‑1 (MQ=255) a‑cTGGGTTTCGCGGGGGCAAACTTAGCATGGCaaa > 1:2470544/1‑35 (MQ=255) a‑cTGGGTTTCGCGGGGGCAAACTTAGCATGGCaaa < 1:12549569/35‑1 (MQ=255) cTGGGTTTCGCGGGGGCAAACTTAGCATGGCAAAc < 1:33109/35‑1 (MQ=255) cTGGGTTTCGCGGGGGCAAACTTAGCATGGCAAAc < 1:17209420/35‑1 (MQ=255) cTGGGTTTCGCGGGGGCAAACTTAGCATGGCAAAc < 1:8653497/35‑1 (MQ=255) cTGGGTTTCGCGGGGGCAAACTTAGCATGGCAAAc > 1:19371715/1‑35 (MQ=255) cTGGGTTTCGCGGGGGCAAACTTAGCATGGCAAAc < 1:5844792/35‑1 (MQ=255) tgGGTTTCGCGGGGGCAAACTTAGCATGGCAAACg > 1:1965432‑M2/3‑35 (MQ=255) tgGGTTTCGCGGGGGCAAACTTAGCATGGCAAACg < 1:16852242‑M2/33‑1 (MQ=255) gGGTTTCGCGGGGGCAAACTTAGCATGGCAAACgg > 1:1927346‑M2/2‑35 (MQ=255) gGGTTTCGCGGGGGCAAACTTAGCATGGCAAACgg > 1:18772612‑M2/2‑35 (MQ=255) gGGTTTCGCGGGGGCAAACTTAGCATGGCAAACgg > 1:6176963‑M2/2‑35 (MQ=255) gGGTTTCGCGGGGGCAAACTTAGCATGGCAAACgg > 1:6560769‑M2/2‑35 (MQ=255) gGGTTTCGCGGGGGCAAACTTAGCATGGCAAACgg < 1:10415504‑M2/34‑1 (MQ=255) ggTTTCGCGGGGGCAAACTTAGCATGGCAAACGgt < 1:5864178/35‑1 (MQ=255) ggTTTCGCGGGGGCAAACTTAGCATGGCAAACGgt < 1:128543/35‑1 (MQ=255) | TGTTCCCATTGGCGCGGCGCTGGCGGCGACA‑CTGGGTTTCGCGGGGGCAAACTTAGCATGGCAAACGGT > REL606/348255‑348323 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |