New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2533712 = | 95 (0.920) | 9 (0.130) | 3/32 | NT | 14.4% | coding (987/2007 nt) | hyfR | DNA‑binding transcriptional activator, formate sensing |
? | REL606 | 3554407 = | 44 (0.640) | coding (321/384 nt) | yhhH | hypothetical protein |
Only 100 of 135 total aligned reads displayed.
AAGGTACCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGA > REL606/3554373‑3554441 | cagattcgaaaggagctgctcgctaagctggtggg > 1:19046285‑M2/35‑35 (MQ=255) cagattcgaaaggagctgctcgctaagctggtggg > 1:15364957‑M2/35‑35 (MQ=255) cagattcgaaaggagctgctcgctaagctgggggg > 1:8870901‑M2/35‑35 (MQ=255) aaGGTACCATTCACTCAGACCAAATTGCTGGTggg > 1:16679194/1‑35 (MQ=255) aaGGTACCATTCACTCAGACCAAATTGCTGGTggg > 1:4126298/1‑35 (MQ=255) aGGTACCATTCACTCAGACCAAATTGCTGGTgggg > 1:17717118/1‑35 (MQ=255) aGGTACCATTCACTCAGACCAAATTGCTGGTgggg > 1:17187778/1‑35 (MQ=255) aGGTACCATTCACTCAGACCAAATTGCTGGTgggg > 1:11818712/1‑35 (MQ=255) ggTACCATTCACTCAGACCAAATTGCTGGTGGGGt < 1:19928712/35‑1 (MQ=255) ggTACCATTCACTCAGACCAAATTGCTGGTGGGGt > 1:15697409/1‑35 (MQ=255) ggTACCATTCACTCAGACCAAATTGCTGGTGGGGt < 1:526321/35‑1 (MQ=255) ggTACCATTCACTCAGACCAAATTGCTGGTGGGGt > 1:13359989/1‑35 (MQ=255) ggTACCATTCACTCAGACCAAATTGCTGGTGGGGt < 1:7658984/35‑1 (MQ=255) ggTACCATTCACTCAGACCAAATTGCTGGTGGGGt < 1:12237032/35‑1 (MQ=255) gTACCATTCACTCAGACCAAATTGCTGGTGGGGtt < 1:15301629/35‑1 (MQ=255) attcgaaaggagctgctcgctaagctggtggGTtt > 1:8031583‑M2/32‑35 (MQ=255) attcgaaaggagctgctcgctaagctggtggGGtt > 1:2336992‑M2/32‑35 (MQ=255) ttcgaaaggagctgctcgctaagctggtggGTttt > 1:13794622‑M2/31‑35 (MQ=255) ttccATTCACTCAGACCAAATTGCTGGTGGGGttt < 1:9050175/33‑1 (MQ=255) tACCATTCACTCAGACCAAATTGCTGGTGGGGttt < 1:17008099/35‑1 (MQ=255) tACCATTCACTCAGACCAAATTGCTGGTGGGGtag > 1:15781064/1‑33 (MQ=255) aCCATTCACTCAGACCAAATTGCTGGTGGGGtttt > 1:12041957/1‑35 (MQ=255) aCCATTCACTCAGACCAAATTGCTGGTGGGGtttt < 1:5819480/35‑1 (MQ=255) aCCATTCACTCAGACCAAATTGCTGGTGGGGtttt < 1:6649533/35‑1 (MQ=255) cgaaaggagctgctcgctaagctggtggGTttttt > 1:10521608‑M2/29‑35 (MQ=255) cgaaaggagctgctcgctaagctggtggGGttttt > 1:6520106‑M2/29‑35 (MQ=255) cgaaaggagctgctcgctaagctggtggGGttttt > 1:18092958‑M2/29‑35 (MQ=255) ccATTCACTCAGACCAAATTGCTGGTGGGGttttt > 1:1053213/1‑35 (MQ=255) ccATTCACTCAGACCAAATTGCTGGTGGGGatttt > 1:5372768/1‑35 (MQ=255) gaaaggagctgctcgctaagctggtggGttttttt > 1:9650119‑M2/28‑34 (MQ=255) cATTCACTCAGACCAAATTGCTGGTGGGGTTTtta > 1:19116842/1‑35 (MQ=255) cATTCACTCAGACCAAATTGCTGGTGGGGTTTtta > 1:17466708/1‑35 (MQ=255) aaaggagctgctcgctaagctggtggggttttttt > 1:1155497‑M2/27‑33 (MQ=255) aTTCACTCAGACCAAATTGCTGGTGGGGTTTttat < 1:4739526/35‑1 (MQ=255) aTTCACTCAGACCAAATTGCTGGTGGGGTTTttat > 1:3035388/1‑35 (MQ=255) aTTCACTCAGACCAAATTGCTGGTGGGGTTTttat > 1:19383262/1‑35 (MQ=255) ttCACTCAGACCAAATTGCTGGTGGGGTTTttatt > 1:9821930/1‑35 (MQ=255) aaggagctgctcgctaagctggtggggtttttgct > 1:9151‑M2/26‑32 (MQ=255) aaggagctgctcgctaagctggtggGGTTTttttt > 1:4106208‑M2/26‑35 (MQ=255) tCACTCAGACCAAATTGCTGGTGGGGTTTttatta < 1:8078865/35‑1 (MQ=255) cACTCAGACCAAATTGCTGGTGGGGTTTTtattat > 1:15913245/1‑35 (MQ=255) cACTCAGACCAAATTGCTGGTGGGGTTTTtattat < 1:186295/35‑1 (MQ=255) cACTCAGACCAAATTGCTGGTGGGGTTTTtattat < 1:1194874/35‑1 (MQ=255) cACTCAGACCAAATTGCTGGTGCGGTTTTtattat > 1:14090998/1‑35 (MQ=255) aCTCATACCAAATTGCTGGTGGGGTTTTTATtata > 1:887903/1‑35 (MQ=255) aCTCAGACCAAATTGCTGGTGGGGTTTTTATtata < 1:14698448/35‑1 (MQ=255) aCTCAGACCAAATTGCTGGTGGGGTTTTTATtata > 1:2997552/1‑35 (MQ=255) aCTCAGACCAAATTGCTGGTGGGGTTTTTATtata > 1:7526820/1‑35 (MQ=255) tCAGACCAAATTGCTGGTGGGGTTTTTATTATAGa > 1:4089771/1‑35 (MQ=255) cAGACCAAATTGCTGGTGGGGTTTTTATTATAGaa > 1:19645240/1‑35 (MQ=255) aGACCAAATTGCTGGTGGGGTTTTTATTATAGaaa > 1:2865630/1‑35 (MQ=255) gACCAAATTGCTGGTGGGGTTTTTATTATAGAAAt < 1:18168529/35‑1 (MQ=255) gACCAAATTGCTGGTGGGGTTTTTATTATAGAAAt < 1:9470412/35‑1 (MQ=255) ccAAATTGCTGGTGGGGTTTTTATTATAGAAATAg > 1:5178880/1‑35 (MQ=255) cAAATTGCTGGTGGGGTTTTTATTATAGAAATAgg < 1:4831427/35‑1 (MQ=255) aaaTTGCTGGTGGGGTTTTTATTATAGAAATAGGc > 1:11089105/1‑35 (MQ=255) aaaTTGCTGGTGGGGTTTTTATTATAGAAATAGGc > 1:9740479/1‑35 (MQ=255) aaaTTGCTGGTGGGGTTTTTATTATAGAAATAGGc < 1:15421905/35‑1 (MQ=255) aaaTTGCTGGTGGGGTTTTTATTATAGAAATAGGc < 1:20415128/35‑1 (MQ=255) aaTTGCTGGTGGGGTTTTTATTATAGAAATAGGCa > 1:20169051/1‑35 (MQ=255) aaTTGCTGGTGGGGTTTTTATTATAGAAATAGGCa > 1:5626517/1‑35 (MQ=255) aaTTGCTGGTGGGGTTTTTATTATAGAAATAGGCa < 1:5886175/35‑1 (MQ=255) aaTTGCTGGTGGGGTTTTTATTATAGAAATAGGCa < 1:665062/35‑1 (MQ=255) aTTGCTGGTGGGGTTTTTATTATAGAAATAggaca > 1:19020468/1‑32 (MQ=255) aTTGCTGGTGGGGTTTTTATTATAGAAATAGGCaa > 1:10559977/1‑35 (MQ=255) aTTGCTGGTGGGGTTTTTATTATAGAAATAGGCaa > 1:16055519/1‑35 (MQ=255) aTTGCTGGTGGGGTTTTTATTATAGAAATAGGCaa > 1:18716035/1‑35 (MQ=255) ttGCTGGTTGGGTTTTTATTATAGAAATAGGCaaa > 1:6917709/1‑35 (MQ=255) ttGCTGGTGGGGTTTTTATTATAGAAATAGGCaaa > 1:18145243/1‑35 (MQ=255) ttGCTGGTGGGGTTTTTATTATAGAAATAGGCaaa > 1:355759/1‑35 (MQ=255) ttGCTGGTGGGGTTTTTATTATAGAAATAGGCaaa > 1:18191778/1‑35 (MQ=255) ttGCTGGTGGGGTTTTTATTATAGAAATAGGCaaa > 1:18213268/1‑35 (MQ=255) ttGCTGGTGGGGTTTTTATTATAGAAATAGGCaaa > 1:1908080/1‑35 (MQ=255) ttGCTGGTGGGGTTTTTATTATAGAAATAGGCaaa > 1:13400544/1‑35 (MQ=255) tGCTGGTGGGGTTTTTATTATAGAAATAGGCaaaa > 1:8108752/1‑35 (MQ=255) tGCTGGTGGGGTTTTTATTATAGAAATAGGCaaaa < 1:17425011/35‑1 (MQ=255) tGCTGGTGGGGTTTTTATTATAGAAATAGGCaaaa < 1:6298791/35‑1 (MQ=255) gctggtggGGTTTTTATTATAGAAATAGGCaaaaa > 1:13288128‑M2/9‑35 (MQ=255) gctggtggGGTTTTTATTATAGAAATAGGCaaaaa > 1:365031‑M2/9‑35 (MQ=255) gctggtggGGTTCTTATTATAGAAATAGGCaaaaa < 1:19160119‑M2/27‑1 (MQ=255) ctggtggGGTTTTTATTATAGAAATAGGCAAAAat < 1:18004504‑M2/28‑1 (MQ=255) ctggtggGGTTTTTATTATAGAAATAGGCAAAAat > 1:11963447‑M2/8‑35 (MQ=255) ctggtggGGTTTTTATTATAGAAATAGGCAAAAat < 1:1953386‑M2/28‑1 (MQ=255) tggtggGGTTTTTATTATAGAAATAGGCAAAAatg > 1:13597918‑M2/7‑35 (MQ=255) tggtggGGTTTTTATTATAGAAATAGGCAAAAatg > 1:3434711‑M2/7‑35 (MQ=255) tggtggGGTTTTTATTATAGAAATAGGCAAAAatg > 1:1875117‑M2/7‑35 (MQ=255) ggtggGGTTTTTATTATAGAAATAGGCAAAAatga > 1:1086840‑M2/6‑35 (MQ=255) ggtggGGTTTTTATTATAGAAATAGGCAAAAatga < 1:7692554‑M2/30‑1 (MQ=255) ggtggGGTTTTTATTATAGAAATAGGCAAAAatga < 1:19331659‑M2/30‑1 (MQ=255) ggtggGGTTTTTATTATAGAAATAGGCAAAAatga > 1:17452073‑M2/6‑35 (MQ=255) gtggGGTTTTTATTATAGAAATAGGCAAAAatgat < 1:16157264‑M2/31‑1 (MQ=255) gtggGGTTTTTATTATAGAAATAGGCAAAAatgat < 1:19839807‑M2/31‑1 (MQ=255) tggGGTTTTTATTATAGAAATAGGCAAAAatgatg < 1:4943237‑M2/32‑1 (MQ=255) tggGGTTTTTATTATAGAAATAGGCAAAAatgatg < 1:12616153‑M2/32‑1 (MQ=255) ggGGTTTTTATTATAGAAATAGGCAAAAATGATgg < 1:9250186‑M2/33‑1 (MQ=255) ggGGTTTTTATTATAGAAATAGGCAAAAATGATgg > 1:16992404‑M2/3‑35 (MQ=255) gGGTTTTTATTATAGAAATAGGCAAaaatgatgtg > 1:864000‑M2/2‑33 (MQ=255) gGGTTTTTATTATAGAAATAGGCAAAAATGATggg > 1:14323314‑M2/2‑35 (MQ=255) ggTTTTTATTATAGAAATAGGCAAAAATGATGGga > 1:9649769/1‑35 (MQ=255) ggTTTTTATTATAGAAATAGGCAAAAATGATGGga > 1:17567996/1‑35 (MQ=255) | AAGGTACCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGA > REL606/3554373‑3554441 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |