New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 449635 = | 24 (0.230) | 5 (0.070) | 3/34 | NT | 11.1% | coding (1050/1551 nt) | ylaB | conserved inner membrane protein |
? | REL606 | = 3144237 | 63 (0.870) | coding (314/1746 nt) | dnaG | DNA primase |
TGATTATAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/449675‑449635 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggctgGGGCCGCTGCCTGCTTCAAATGGCACTTCAAGA < REL606/3144237‑3144205 TGATTATAAGAAGCGTCTTTGAAGATATGGGCGAC > 1:9323084/1‑35 TGATTATAAGAAGCGTCTTTGAAGATATGGGCGAC < 1:1785932/35‑1 TGATTATAAGAAGCGTCTTTGAAGATATGGGCGAC > 1:7802411/1‑35 TGATTATAAGAAGCGTCTTTGAAGATATGGGCGAC > 1:1121828/1‑35 TGATTATAAGAAGCGTCTTTGAAGATATGGGCGAC < 1:1396555/35‑1 TGATTATAAGAAGCGTCTTTGAAGATATGGGCGAC > 1:11538471/1‑35 TGATTATAAGAAGCGTCTTTGAAGATATGGGCGAC > 1:3446479/1‑35 TGATTATAAGAAGCGTCTTTGAAGATATGGGCGAC < 1:11779005/35‑1 GATTATAAGAAGCGTCTTTGAATATATGGGCGACT > 1:4585367/1‑35 GATTATAAGAAGCGTCTTTGAAGATATGGGCGACT > 1:16352649/1‑35 GATTATAAGAAGCGTCTTTGAAGATATGGGCGACT > 1:16476019/1‑35 GATTATAAGAAGCGTCTTTGAAGATATGGGCGACT > 1:18332755/1‑35 GATTATAAGAAGCGTCTTTGAAGATATGGGCGACT > 1:18577287/1‑35 GATTATAAGAAGCGTCTTTGAAGATATGGGCGACT < 1:4496900/35‑1 GATTATAAGAAGCGTCTTTGAAGATATGGGCGACT > 1:11416528/1‑35 GATTATAAGAAGCGTCTTTGAAGATATGGGCGACT < 1:11851937/35‑1 ATTATAAGAAGCGTCTTTGAAGATATGGGCGACTG < 1:16416018/35‑1 ATTATAAGAAGCGTCTTTGAAGATATGGGCGACTG < 1:6977860/35‑1 ATTATAAGAAGCGTCTTTGAAGATATGGGCGACTG < 1:14354388/35‑1 ATTATAAGAAGCGTCTTTGAAGATATGGGCGACTG > 1:13668564/1‑35 ATTATAAGAAGCGTCTTTGAAGATATGGGCGACTG > 1:1183650/1‑35 ATTATAAGAAGCGTCTTTGAAGATATGGGCGACTG < 1:11595031/35‑1 ATTATAAGAAGCGTCTTTGAAGATATGGGCGACTG < 1:12730193/35‑1 ATTATAAGAAGCGTCTTTGAAGATATGGGCGACTG < 1:12475030/35‑1 TTATAAGAAGCGTCTTTGAATATATGGGCGACTGG > 1:19510010/1‑35 TTATAAGAAGCGTCTTTGAAGATATGGGCGACTGG > 1:9504285/1‑35 TTATAAGAAGCGTCTTTGAAGATATGGGCGACTGG > 1:9173922/1‑35 TTATAAGAAGCGTCTTTGAAGATATGGGCGACTGG > 1:15538298/1‑35 TTATAAGAAGCGTCTTTGAAGATATGGGCGACTGG < 1:15345519/35‑1 TTATAAGAAGCGTCTTTGAAGATATGGGCGACTGG < 1:11149163/35‑1 TTATAAGAAGCGTCTTTGAAGATATGGGCGACTGG < 1:13483628/35‑1 TTATAAGAAGCGTCTTTGAAGATATGGGCGACTGG < 1:19661092/35‑1 TATAGGAAGCGTCTTTGAAGATATGGGCGACTGGC < 1:17455217/35‑1 TATAAGAAGCGTCTTTGAAGATATGTGCGACTGGC > 1:18098504/1‑35 TATAAGAAGCGTCTTTGAAGATATGGGCGACTGGC < 1:4960075/35‑1 TATAAGAAGCGTCTTTGAAGATATGGGCGACTGGC < 1:16476103/35‑1 TATAAGAAGCGTCTTTGAAGATATGGGCGACTGGC > 1:2533808/1‑35 TATAAGAAGCGTCTTTGAAGATATGGGCGACTGGC < 1:10431457/35‑1 ATAAGAAGCGTCTTTGAAGATATGGGCGACTGGCT < 1:19583964/35‑1 ATAAGAAGCGTCTTTGAAGATATGGGCGACTGGCT < 1:11317195/35‑1 ATAAGAAGCGTCTTTGAAGATATGGGCGACTGGCT < 1:4445131/35‑1 ATAAGAAGCGTCTTTGAAGATATGGGCGACTGGCT < 1:12096469/35‑1 ATAAGAAGCGTCTTTGAAGATATGGGCGACTGGCT > 1:13987795/1‑35 ATAAGAAGCGTCTTTGAAGATATGGGCGACTGGCT < 1:17430382/35‑1 ATAAGAAGCGTCTTTGAAGATATGGGCGACTGGCT > 1:11159657/1‑35 TAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTG < 1:13734428/35‑1 TAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTG > 1:18209632/1‑35 TAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTG < 1:15068927/35‑1 TAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTG < 1:8072926/35‑1 TAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTG > 1:13141474/1‑35 TAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTG > 1:84942/1‑35 TAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTG < 1:1567025/35‑1 TAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTG > 1:3027859/1‑35 TAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTG < 1:3216180/35‑1 AAGAAGCGTCTTTGAAGATATGGGCGACTGGCTGG > 1:461702/1‑35 AAGAAGCGTCTTTGAAGATATGGGCGACTGGCTGG > 1:1978645/1‑35 AAGAAGCGTCTTTGAAGATATGGGCGACTGGCTGG > 1:4635681/1‑35 AAGAAGCGTCTTTGAAGATATGGGCGACTGGCTGG > 1:7309435/1‑35 AAGAAGCGTCTTTGAAGATATGGGCGACTGGCTGG > 1:14590627/1‑35 AAGAAGCGTCTTTGAAGATATGGGCGACTGGCTGG > 1:16607884/1‑35 AGAAGCGTCTTTGAAGATATGGGCGACTGGCTGGG > 1:6633266/1‑35 AGAAGCGTCTTTGAAGATATGGGCGACTGGCTGGG > 1:15629727/1‑35 AGAAGCGTCTTTGAAGATATGGGCGACTGGCTGGG > 1:11045371/1‑35 AGAAGCGTCTTTGAAGATATGGGCGACTGGCTGGG > 1:9396718/1‑35 GAAGCGTCTTTGAAGATATGGGCGACTGGCTGGGG > 1:2607843/1‑35 AAGCGTCTTTGAAGATATGGGCGACTGGCTGGGGg > 1:9966178/1‑34 AAGCGTCTTTGAAGATATGGGCGACTGGCTGGGGg > 1:16133215/1‑34 AAGCGTCTTTGAAGATATGGGCGACTGGCTGGGGC > 1:4056725/1‑35 AAGCGTCTTTGAAGATATGGGCGACTGGCTGGGGC > 1:11147058/1‑35 AAGCGTCTTTGAAGATATGGGCGACTGGCTGGGGC > 1:17324112/1‑35 AGCGTCTTTGAAGATATGGGCGACTGGCTGGGGgg > 1:17247670/1‑33 AGCGTCTTTGAAGATATGGGCGACTGGCTGGGGgc > 1:17817003/1‑33 GCGTCTTTGAAGATATGGGCGACTGGCTGGGGGCG > 1:18349036/1‑35 CGTCTTTGAAGATATGGGCGACTGGCTGGGGGCGg > 1:162656/1‑34 CGTCTTTGAAGATATGGGCGACTGGCTGGGGCCGC > 1:6691224/1‑35 GTCTTTGAAGATATGGGCGACTGGCTGGGGCCGCc > 1:13004132/1‑34 TTTGAAGATATGGGCGACTGGCTGGGGCCGCGGCC > 1:6606941/1‑35 CTGGCTGGGGCCGCTGCCTGCTTCAAATGGCACTT < 1:7795776/35‑1 CTGGCTGGGGCCGCTGCCTGCTTCAAATGGCACTT > 1:14692364/1‑35 CTGGCTGGGGCCGCTGCCTGCTTCAAATGGCACTT < 1:8251241/35‑1 CTGGCTGGGGCCGCTGCCTGCTTCAAATGGCACTT < 1:11627382/35‑1 TGGCTGGGGCCGCTGCCTGCTTCAAATGGCACTTC < 1:8017071/35‑1 TGGCTGGGGCCGCTGCCTGCTTCAAATGGCACTTC < 1:2639158/35‑1 gcgGGGGCCGCTGCCTGCTTCAAATGGCACTTCAA < 1:16100794/32‑1 GCTGGGGCCGCTGCCTGCTTCAAATGGCACTTCAA > 1:20518156/1‑35 GCTGGGGCCGCTGCCTGCTTCAAATGGCACTTCAA > 1:2960669/1‑35 CTGGGGCCGCTGCCTGCTTCAAATGGCACTTCAAG > 1:6046492/1‑35 CTGGGGCCGCTGCCTGCTTCAAATGGCACTTCAAG < 1:13429530/35‑1 TGGGGCCGCTGCCTGCTTCAAATGGCACTTCAAta > 1:19549700/1‑33 TGGGGCCGCTGCCTGCTTCAAATGGCACTTCAAGA > 1:18721836/1‑35 TGGGGCCGCTGCCTGCTTCAAATGGCACTTCAAGA > 1:11458835/1‑35 TGATTATAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/449675‑449635 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggctgGGGCCGCTGCCTGCTTCAAATGGCACTTCAAGA < REL606/3144237‑3144205 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |