New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1544434 = | 52 (0.510) | 6 (0.060) | 4/46 | NT | 10.0% | coding (7/1536 nt) | xasA | predicted glutamate:gamma‑aminobutyric acid antiporter |
? | REL606 | = 2047872 | 58 (0.590) | coding (1256/1395 nt) | wcaM | predicted colanic acid biosynthesis protein |
Only 100 of 102 total aligned reads displayed.
ATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAACACGCCGCGAACGTCTTTGCGCAT > REL606/2047838‑2047906 | aTGAACATTTGCAAGAGACAGCAGTGTTTCttttt > 1:15710750/1‑35 (MQ=255) aTGAACATTTGCAAGAGACAGCAGTGTTTCttttt > 1:16199413/1‑35 (MQ=255) aTGAACATTTGCAAGAGACAGCAGTGTTTCttttt > 1:8071401/1‑35 (MQ=255) aTGAACATTTGCAAGAGACAGCAGTGTTTCttttt < 1:12698839/35‑1 (MQ=255) tGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTt < 1:13271622‑M2/35‑2 (MQ=255) tGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTt > 1:13090731‑M2/1‑34 (MQ=255) tGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTt < 1:19404331‑M2/35‑2 (MQ=255) tGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTt > 1:3672904‑M2/1‑34 (MQ=255) tGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTt > 1:10124884‑M2/1‑34 (MQ=255) gAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTc < 1:13685567/35‑1 (MQ=255) aaCATTTGCAAGAGACAGCAGTGTTTCTTTTTTCg > 1:1150985/1‑35 (MQ=255) aaCATTTGCAAGAGACAGCAGTGTTTCTTTTTTCg > 1:1470599/1‑35 (MQ=255) aaCATTTGCAAGAGACAGCAGTGTTTCTTTTTTCg < 1:10898787/35‑1 (MQ=255) aaCATTTGCAAGAGACAGCAGTGTTTCTTTTTTCg < 1:1459587/35‑1 (MQ=255) aCATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGc < 1:1149670/35‑1 (MQ=255) aCATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGc > 1:7472255/1‑35 (MQ=255) cATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGcc > 1:12380101/1‑35 (MQ=255) aTTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCa < 1:4991665/35‑1 (MQ=255) aTTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCa < 1:15036370/35‑1 (MQ=255) aTTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCa > 1:14950866/1‑35 (MQ=255) tttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCAt < 1:14490319/35‑1 (MQ=255) tttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCAt < 1:363302/35‑1 (MQ=255) tttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCAt > 1:888571/1‑35 (MQ=255) tttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCAt > 1:9830782/1‑35 (MQ=255) tttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCAt < 1:12226389/35‑1 (MQ=255) ttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATa < 1:18979790/35‑1 (MQ=255) ttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATa > 1:16561912/1‑35 (MQ=255) ttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATa < 1:6406406/35‑1 (MQ=255) ttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATa > 1:6318450/1‑35 (MQ=255) ttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATa < 1:15338291/35‑1 (MQ=255) ttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATa < 1:5721023/35‑1 (MQ=255) tGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATaa < 1:15641899/35‑1 (MQ=255) tGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATaa > 1:3484819/1‑35 (MQ=255) gCAAGAGACAGCAGTGTTTCTTTTTTCGCCATaaa < 1:5894543/35‑1 (MQ=255) gCAAGAGACAGCAGTGTTTCTTTTTTCGCCATaaa < 1:9667630/35‑1 (MQ=255) gCAAGAGACAGCAGTGTTTCTTTTTTCGCCATaaa < 1:962968/35‑1 (MQ=255) gCAAGAGACAGCAGTGTTTCTTTTTTCGCCATaaa > 1:9426729/1‑35 (MQ=255) gCAAGAGACAGCAGTGTTTCTTTTTTCGCCATaaa > 1:5778871/1‑35 (MQ=255) gCAAGAGACAGCAGTGTTTCTTTTTTCGCCATaaa < 1:835934/35‑1 (MQ=255) gCAAGAGACAGCAGTGTTTCTTTTTTCGCCATaaa > 1:13978688/1‑35 (MQ=255) gCAAGAGACAGCAGTGTTTCTTTTTTCGCCATaaa > 1:14240136/1‑35 (MQ=255) cAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAac > 1:14854708/1‑35 (MQ=255) aaGAGACAGCAGTGTTTCTTTTTTCGCCATAAaca < 1:19549848/35‑1 (MQ=255) aaGAGACAGCAGTGTTTCTTTTTTCGCCATAAaca > 1:11216553/1‑35 (MQ=255) agagACAGCAGTGTTTCTTTTTTCGCCATAAacac < 1:5544168/35‑1 (MQ=255) agagACAGCAGTGTTTCTTTTTTCGCCATAAacac > 1:8126850/1‑35 (MQ=255) gagaCAGCAGTGTTTCTTTTTTCGCCATAAACAcg > 1:13107353/1‑35 (MQ=255) gagaCAGCAGTGTTTCTTTTTTCGCCATAAACAcg < 1:12733949/35‑1 (MQ=255) gagaCAGCAGTGTTTCTTTTTTCGCCATAAACAcg > 1:14166390/1‑35 (MQ=255) agaCAGCAGTGTTTCTTTTTTCGCCATAAACAcgc < 1:5389467/35‑1 (MQ=255) agaCAGCAGTGTTTCTTTTTTCGCCATAAACAcgc < 1:17297640/35‑1 (MQ=255) agaCAGCAGTGTTTCTTTTTTCGCCATAAACAcgc > 1:4868556/1‑35 (MQ=255) gaCAGCAGTGTTTCTTTTTTCGCCATAAACAcgcc < 1:5244312/35‑1 (MQ=255) gaCAGCAGTGTTTCTTTTTTCGCCATAAACAcgcc < 1:17984013/35‑1 (MQ=255) gaCAGCAGTGTTTCTTTTTTCGCCATAAACAcgcc > 1:13168683/1‑35 (MQ=255) aCAGCAGTGTTTCTTTTTTCGCCATAAACAcgccg < 1:17742184/35‑1 (MQ=255) aCAGCAGTGTTTCTTTTTTCGCCATAAACAcgccg > 1:287095/1‑35 (MQ=255) aCAGCAGTGTTTCTTTTTTCGCCATAAACAcgccg > 1:19648055/1‑35 (MQ=255) aCAGCAGTGTTTCTTTTTTCGCCATAAACAcgccg < 1:6370134/35‑1 (MQ=255) cagcagTGTTTCTTTTTTCGCCATAAACAcgccgc > 1:4587772/1‑35 (MQ=255) agcagTGTTTCTTTTTTCGCCATAAACACGCcgcg < 1:18858683/35‑1 (MQ=255) agcagTGTTTCTTTTTTCGCCATAAACACGCcgcg > 1:7998126/1‑35 (MQ=255) gcagTGTTTCTTTTTTCGCCATAAACACGCCGCGa > 1:9673298/1‑35 (MQ=255) cagTGTTTCTTTTTTCGCCATAAACACGCCGCGaa < 1:2592344/35‑1 (MQ=255) cagTGTTTCTTTTTTCGCCATAAACACGCCGCGaa > 1:5163978/1‑35 (MQ=255) cagTGTTTCTTTTTTCGCCATAAACACGCCGCGaa < 1:16674073/35‑1 (MQ=255) agTGTTTCTTTTTTCGCCATAAACACGCCGCGAAc > 1:16099036/1‑35 (MQ=255) tgtTTCTTTTTTCGCCATAAACACGCCGCGAACGt > 1:7106728/1‑35 (MQ=255) tgtTTCTTTTTTCGCCATAAACACGCCGCGAACGt > 1:9827623/1‑35 (MQ=255) tgtTTCTTTTTTCGCCATAAACACGCCGCGAACGt > 1:10219860/1‑35 (MQ=255) tgtTTCTTTTTTCGCCATAAACACGCCGCGAACGt < 1:17538752/35‑1 (MQ=255) gtTTCTTTTTTCGCCATAAACACGCCGCGAACGTc > 1:5113330/1‑35 (MQ=255) gtTTCTTTTTTCGCCATAAACACGCCGCGAACGTc > 1:13326702/1‑35 (MQ=255) tttCTTTTTtagccatattatcccccaaaaacggt > 1:4786350‑M2/1‑9 (MQ=255) gttcTTTTTtagccatattatccccctaaaacggt > 1:15838269‑M2/2‑9 (MQ=255) gttcTGTTTtagccatattatccccctaaaacggt > 1:15152720‑M2/2‑9 (MQ=255) ttCTTTTTtagccatattatccccctaaaacggta > 1:3621773‑M2/1‑8 (MQ=255) ttCTTTTTTCGCCATAAACACGCCGCGAACGTCtt < 1:16960355/35‑1 (MQ=255) ttCTTTTTTCGCCATAAACACGCCGCGAACGTCtt < 1:11233832/35‑1 (MQ=255) ttCTTTTTTCGCCATAAACACGCCGCGAACGTCtt < 1:209400/35‑1 (MQ=255) tCTTTTTTCGCCATAAACACGCCGCGAACGTCttt < 1:2104673/35‑1 (MQ=255) tCTGTTTtagccatattatccccctaaaacggtat > 1:2886619‑M2/1‑7 (MQ=255) cTTTTTtagccatattatccccctaaaacggtatt > 1:20066751‑M2/1‑6 (MQ=255) ttttttCGCCATAAACACGCCGCGAACGTCTTTgc < 1:20519458/35‑1 (MQ=255) ttttttCGCCATAAACACGCCGCGAACGTCTTTgc > 1:3352286/1‑35 (MQ=255) ttttttAGCCATAAACACGCCGCGAACGTCTTTgc < 1:4003459/35‑1 (MQ=255) tgttttagccatattatccccctaaaacggtattc > 1:19918918‑M2/3‑5 (MQ=255) tgttttagccatattatccccctaaaacggtattc > 1:13186541‑M2/3‑5 (MQ=255) tgttttagccatattatccccctaaaacggtattc > 1:16183324‑M2/3‑5 (MQ=255) tttttagccatattatccccctaaaacggtattcc > 1:2178936‑M2/1‑4 (MQ=255) tttttCGCCATAAACACGCCGCGAACGTCTTTgcg > 1:12433867/1‑35 (MQ=255) gttttagccatattatccccctaaaacggtattcc > 1:18057194‑M2/2‑4 (MQ=255) ttttagccatattatccccctaaaacggtattcct > 1:14180048‑M2/1‑3 (MQ=255) ttttCGCCATAAACACGCCGCGAACGTCTTTgcgc < 1:619337/35‑1 (MQ=255) tttagccatattatccccctaaaacggtattcctg > 1:7324920‑M2/1‑2 (MQ=255) tttCGCCATAAACACGCCGCGAACGTCTTTGCGCa > 1:10613233/1‑35 (MQ=255) tttCGCCATAAACACGCCGCGAACGTCTTTGCGCa < 1:12758367/35‑1 (MQ=255) tttCGCCATAAACACGCCGCGAACGTCTTTGCGCa < 1:2774035/35‑1 (MQ=255) ttCGCCATAAACACGCCGCGAACGTCTTTGCGCAt < 1:15296491/35‑1 (MQ=255) ttCGCCATAAACACGCCGCGAACGTCTTTGCGCAt < 1:13786000/35‑1 (MQ=255) | ATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAACACGCCGCGAACGTCTTTGCGCAT > REL606/2047838‑2047906 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |