New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 411751 = | 19 (0.180) | 8 (0.080) | 3/44 | NT | 12.3% | coding (313/591 nt) | thiJ | hypothetical protein |
? | REL606 | = 1138232 | 97 (1.030) | coding (395/648 nt) | grxB | glutaredoxin 2 (Grx2) |
Only 100 of 164 total aligned reads displayed.
CAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTGGCCTCTTTCTTGTCGACGAAATA > REL606/1138198‑1138266 | cAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAAt > 1:3568286/1‑35 (MQ=255) cAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAAt < 1:16454147/35‑1 (MQ=255) aGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATt < 1:20121274‑M2/35‑2 (MQ=255) gACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATta > 1:9402505‑M2/1‑33 (MQ=255) gACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATta > 1:16046240‑M2/1‑33 (MQ=255) aCCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTAc < 1:9715724/35‑1 (MQ=255) aCCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTAc > 1:7841932/1‑35 (MQ=255) aCCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTAc > 1:13720529/1‑35 (MQ=255) aCCGTCAGAGGGGGCCAGCAGGTCGGCAAAATTAc > 1:6306389/1‑35 (MQ=255) ccGTCAGAGTGGGCCAGCAGGTCGGCAAAATTAcc < 1:14159549/35‑1 (MQ=255) ccGTCAGAGTGGGCCAGCAGGTCGGCAAAATTAcc < 1:1490767/35‑1 (MQ=255) ccGTCAGAGTGGGCCAGCAGGTCGGCAAAATTAcc < 1:19638180/35‑1 (MQ=255) ccGTCAGAGTGGGCCAGCAGGTCGGCAAAATTAcc < 1:12650316/35‑1 (MQ=255) cGTCAGAGTGGGCCAGCAGGTCGGCAAAATTAccc < 1:11348979/35‑1 (MQ=255) cGTCAGAGTGGGCCAGCAGGTCGGCAAAATTAccc < 1:2687811/35‑1 (MQ=255) gTCAGAGTGGGCCAGCAGGTCGGCAAAATTACCcg < 1:13110195/35‑1 (MQ=255) gTCAGAGTGGGCCAGCAGGTCGGCAAAATTACCcg < 1:20589775/35‑1 (MQ=255) gTCAGAGTGGGCCAGCAGGTCGGCAAAATTACCcg > 1:13969493/1‑35 (MQ=255) tCAGAGTGGGCCAGCAGGTCGGCAAAATTACCcgc < 1:19551369/35‑1 (MQ=255) tCAGAGTGGGCCAGCAGGTCGGCAAAATTACCcgc > 1:19840859/1‑35 (MQ=255) cAGAGTGGGCCAGCAGGTCGGCAAAATTACCcgcg > 1:11250848/1‑35 (MQ=255) cAGAGTGGGCCAGCAGGTCGGCAAAATTACCcgcg > 1:12736596/1‑35 (MQ=255) cAGAGTGGGCCAGCAGGTCGGCAAAATTACCcgcg < 1:19008150/35‑1 (MQ=255) agagTGGGCCAGCAGGTCGGCAAAATTACCCgcgc > 1:1477167/1‑35 (MQ=255) agagTGGGCCAGCAGGTCGGCAAAATTACCCgcgc > 1:20387139/1‑35 (MQ=255) agagTGGGCCAGCAGGTCGGCAAAATTACCCgcgc > 1:3172372/1‑35 (MQ=255) agagTGGGCCAGCAGGTCGGCAAAATTACCCgcgc > 1:5963230/1‑35 (MQ=255) gagTGTGCCAGCAGGTCGGCAAAATTACCCGCGCt > 1:17211565/1‑35 (MQ=255) gagTGGGCCAGCAGGTCGGCAAAATTACCCGCGCt < 1:3295095/35‑1 (MQ=255) gagTGGGCCAGCAGGTCGGCAAAATTACCCGCGCt < 1:10404918/35‑1 (MQ=255) agTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTg < 1:663805/35‑1 (MQ=255) gTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTgg > 1:726418/1‑35 (MQ=255) gTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTgg > 1:5872402/1‑35 (MQ=255) gTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTgg < 1:19718169/35‑1 (MQ=255) gTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTgg < 1:12025657/35‑1 (MQ=255) gTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTgg > 1:8854529/1‑35 (MQ=255) tGGGCCAGCAGGTCGGCAAAATTACCCGCGCTGGc < 1:2203043/35‑1 (MQ=255) ggCCAGCAGGTCGGCAAAATTACCCGCGCTGGCct > 1:6468774/1‑35 (MQ=255) ggCCAGCAGGTCGGCAAAATTACCCGCGCTGGCct > 1:7713245/1‑35 (MQ=255) ggCCAGCAGGTCGGCAAAATTACCCGCGCTGGCct > 1:12833624/1‑35 (MQ=255) ggCCAGCAGGTCGGCAAAATTACCCGCGCTGGCct < 1:1810788/35‑1 (MQ=255) ggCCAGCAGGTCGGCAAAATTACCCGCGCTGGCct < 1:11867965/35‑1 (MQ=255) gCCAGCAGGTCGGCAAAATTACCCGCGCTGGCctc > 1:16872896/1‑35 (MQ=255) gCCAGCAGGTCGGCAAAATTACCCGCGCTGGCctc < 1:7912903/35‑1 (MQ=255) ccAGCAGGTCGGCAAAATTACCCGCGCTGGCctct > 1:17572803/1‑35 (MQ=255) ccAGCAGGTCGGCAAAATTACCCGCGCTGGCctct < 1:8394361/35‑1 (MQ=255) ccAGCAGGTCGGCAAAATTACCCGCGCTGGCctct < 1:14928945/35‑1 (MQ=255) ccAGCAGGTCGGCAAAATTACCCGCGCTGGCctcc > 1:20395011/1‑34 (MQ=255) ccAGCAGGTCGGCAAAATTACCAGCGCTGGCctct < 1:14127601/35‑1 (MQ=255) agcagGTCGGCAAAATTACCCGCGCTGGCCtcttt < 1:15236947/35‑1 (MQ=255) agcagGTCGGCAAAATTACCCGCGCTGGCAtcttt < 1:14956018/35‑1 (MQ=255) gcagGTCGGCAAAATTACCCGCGCTGGCCtctttc > 1:2318693/1‑35 (MQ=255) gcagGTCGGCAAAATTACCCGCGCTGGCCtctttc < 1:4059675/35‑1 (MQ=255) gcagGTCGGCAAAATTACCCGCGCTGGCCtctttc > 1:5257255/1‑35 (MQ=255) cagGTCGGCAAAATTACCCGCGCTGGCCtctttct < 1:14171984/35‑1 (MQ=255) cagGTCGGCAAAATTACCCGCGCTGGCCtctttct > 1:16036647/1‑35 (MQ=255) agGTCGGCAAAATTACCCGCGCTGGCCtctttctt > 1:10229565/1‑35 (MQ=255) agGTCGGCAAAATTACCCGCGCTGGCCtctttctt < 1:18284938/35‑1 (MQ=255) agGTCGGCAAAATTACCCGCGCTGGCCtctttctt < 1:7796096/35‑1 (MQ=255) agGTCGGCAAAATTACCCGCGCTGGCCtctttctt > 1:6819694/1‑35 (MQ=255) agGTCGGCAAAATTACCCGCGCTGGCCtctttctt < 1:16340876/35‑1 (MQ=255) agGTCGGCAAAATTACCCGCGCTGGCCtctttctt < 1:16361535/35‑1 (MQ=255) ggTCGGCAAAATTACCCGCGCTGGCCTCTTTCTTg < 1:9454990/35‑1 (MQ=255) ggTCGGCAAAATTACCCGCGCTGGCCTCTTTCTTg > 1:736318/1‑35 (MQ=255) ggTCGGCAAAATTACCCGCGCTGGCCTCTTTCTTg < 1:6921369/35‑1 (MQ=255) ggTCGGCAAAATTACCCGCGCTGGCCTCTTTCTTg > 1:4294951/1‑35 (MQ=255) gTCGGCAAAATTACCCGCGCTGGCCTCTTTCTTGt > 1:5650776/1‑35 (MQ=255) cggggcaaAATtagccgcgacgatacgcccggaac > 1:1830325‑M2/4‑11 (MQ=255) tCGGCAAAATTACCCGCGCTGGCCTCTTTCTTGTc > 1:7088972/1‑35 (MQ=255) tCGGCAAAATTACCCGCGCTGGCCTCTTTCTTGTc > 1:11818281/1‑35 (MQ=255) gcgGCGAAATtagccgcgacgatacgcccggaacg > 1:3806041‑M2/2‑10 (MQ=255) cGGCAAAATTACCCGCGCTGGCCTCTTTCTTGTcg > 1:6217143/1‑35 (MQ=255) ggCGAAATtagccgcgacgatacgcccggaacggt > 1:15156006‑M2/1‑8 (MQ=255) ggCAAAATtagccgcgacgatacgcccggaacggt > 1:3610130‑M2/1‑8 (MQ=255) ggCAAAATTACCCGCGCTGGCCTCTTTCTTGTcga < 1:8104309/35‑1 (MQ=255) gCAAAATTACCCGCGCTGGCCTCTTTCTTGTcgac > 1:5169604/1‑35 (MQ=255) gCAAAATTACCCGCGCTGGCCTCTTTCTTGTcgac > 1:6158264/1‑35 (MQ=255) gCAAAATTACCCGCGCTGGCCTCTTTCTTGTcgac > 1:3223613/1‑35 (MQ=255) gCAAAATTACCCGCGCTGGCCTCTTTCTTGTcgac > 1:16320717/1‑35 (MQ=255) acaAAATtagccgcgacgatacgcccggaacggtg > 1:17698701‑M2/2‑7 (MQ=255) cAAAATTACCCGCGCTGGCCTCTTTCTTGTcgacg < 1:17160062/35‑1 (MQ=255) cAAAATTACCCGCGCTGGCCTCTTTCTTGTcgacg > 1:13391040/1‑35 (MQ=255) aaaaTtagccgcgacgatacgcccggaacggtgga > 1:8080771‑M2/1‑5 (MQ=255) aaaaTTACCCGCGCTGGCCTCTTTCTTGTcgacga < 1:10621874/35‑1 (MQ=255) aaaaTTACCCGCGCTGGCCTCTTTCTTGTcgacga < 1:13179403/35‑1 (MQ=255) aaaaTTACCCGCGCTGGCCTCTTTCTTGTcgacga < 1:8440802/35‑1 (MQ=255) aaaTtagccgcgacgatacgcccggaacggtggaa > 1:11059888‑M2/1‑4 (MQ=255) aaaTTGCCCGCGCTGGCCTCTTTCTTGTCGACGaa < 1:4713970/35‑1 (MQ=255) aaaTTACCCGCGCTGGCCTCTTTCTTGTCGACGaa < 1:6456501/35‑1 (MQ=255) aaaTTACCCGCGCTGGCCTCTTTCTTGTCGACGaa > 1:16715892/1‑35 (MQ=255) aaTTACCCGCGCTGGCCTCTTTCTTGTCGACGaaa > 1:6759262/1‑35 (MQ=255) tttagccgcgacgatacgcccggaacggtggaact > 1:10236124‑M2/2‑2 (MQ=255) tttagccgcgacgatacgcccggaacggtggaact > 1:875189‑M2/2‑2 (MQ=255) aTtagccgcgacgatacgcccggaacggtggaact > 1:9558335‑M2/1‑2 (MQ=255) aTTACCCGCGCTGGCCTCTTTCTTGTCGACGAAat > 1:5255192/1‑35 (MQ=255) aTTACCCGCGCTGGCCTCTTTCTTGTCGACGAAat < 1:15591513/35‑1 (MQ=255) aTTACCCGCGCTGGCCTCTTTCTTGTCGACGAAat > 1:16861051/1‑35 (MQ=255) aTTACCCGCGCTGGCCTCTTTCTTGTCGACGAAat > 1:3831188/1‑35 (MQ=255) ttagccgcgacgatacgccaggaacggtggaactg > 1:17439896‑M2/1‑1 (MQ=255) ttACCCGCGCTGGCCTCTTTCTTGTCGACGAAata < 1:15712882/35‑1 (MQ=255) | CAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTGGCCTCTTTCTTGTCGACGAAATA > REL606/1138198‑1138266 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |