New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2966320 | 71 (0.690) | 9 (0.120) | 3/36 | NT | 10.0% | coding (1067/1992 nt) | tktA | transketolase 1, thiamin‑binding |
? | REL606 | 3882316 = | 109 (1.410) | coding (102/816 nt) | atpB | F0F1 ATP synthase subunit A |
CCGAACGCTTCGATAGCATTCTGAGACGCTTTACGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2966281‑2966320 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctggGGGGTTTTGTGGATCCACCAGCGAGAATGTACGC > REL606/3882316‑3882349 CCGAACGCTTCGATAGCATTCTGAGACGCTTTACG < 1:1719370/35‑1 CCGAACGCTTCGATAGCATTCTGAGACGCTTTACG > 1:19986316/1‑35 CCGAACGCTTCGATAGCATTCTGAGACGCTTTACG < 1:20022247/35‑1 CCGAACGCTTCGATAGCATTCTGAGACGCTTTACG < 1:5650572/35‑1 CCGAACGCTTCGATAGCATTCTGAGACGCTTTACG > 1:5203077/1‑35 CGAACGCTTCGATAGCATTCTGAGACGCTTTACGG > 1:15412572/1‑35 CGAACGCTTCGATAGCATTCTGAGACGCTTTACGG > 1:20212870/1‑35 CGAACGCTTCGATAGCATTCTGAGACGCTTTACGG > 1:1351636/1‑35 CGAACGCTTCGATAGCATTCTGAGACGCTTTACGG < 1:12891530/35‑1 CGAACGCTTCGATAGCATTCTGAGACGCTTTACGG < 1:6385965/35‑1 CGAACGCTTCGATAGCATTCTGAGACGCTTTACGG > 1:1116781/1‑35 CGAACGCTTCGATAGCATTCTGAGACGCTTTACGG < 1:10092044/35‑1 GAACGCTTCGATAGCATTCTGAGACGCTTTACGGC > 1:5363014/1‑35 GAACGCTTCGATAGCATTCTGAGACGCTTTACGGC > 1:5008369/1‑35 GAACGCTTCGATAGCATTCTGAGACGCTTTACGGC < 1:20461708/35‑1 GAACGCTTCGATAGCATTCTGAGACGCTTTACGGC > 1:7091510/1‑35 GAACGCTTCGATAGCATTCTGAGACGCTTTACGGC > 1:8869607/1‑35 GAACGCTTCGATAGCATTCTGAGACGCTTTACGGC > 1:11746898/1‑35 GAACGCTTCGATAGCATTATGAGACGCTTTACGGC < 1:5956111/35‑1 AACGCTTCGATAGCATTCTGAGACGCTTTACGGCT > 1:17475387/1‑35 AACGCTTCGATAGCATTCTGAGACGCTTTACGGCT > 1:18054031/1‑35 AACGCTTCGATAGCATTCTGAGACGCTTTACGGCT > 1:17762133/1‑35 ACGCTTCGATAGCATTCTGAGACGCTTTACGGCTG > 1:10717966/1‑35 ACGCTTCGATAGCATTCTGAGACGCTTTACGGCTG < 1:19189049/35‑1 ACGCTTCGATAGCATTCTGAGACGCTTTACGGCTG > 1:9847450/1‑35 ACGCTTCGATAGCATTCTGAGACGCTTTACGGCTG < 1:17950623/35‑1 CGCTTCGATAGCATTCTGAGACGCTTTACGGCTGG < 1:13242663/35‑1 CGCTTCGATAGCATTCTGAGACGCTTTACGGCTGG > 1:7243982/1‑35 CGCTTCGATAGCATTCTGAGACGCTTTACGGCTGG < 1:17462861/35‑1 CGCTTCGATAGCATTCTGAGACGCTTTACGGCTGG < 1:7260884/35‑1 CGCTTCGATAGCATTCTGAGACGCTTTACGGCTGG < 1:9144645/35‑1 GCTTCGATAGCATTCTGAGACGCTTTACGGCTGGG > 1:15989979/1‑35 GCTTCGATAGCATTCTGAGACGCTTTACGGCTGGG > 1:7245485/1‑35 GCTTCGATAGCATTCTGAGACGCTTTACGGCTGGG > 1:4891808/1‑35 GCTTCGATAGCATTCTGAGACGCTTTACGGCTGGG > 1:892599/1‑35 GCTTCGATAGCATTCTGAGACGCTTTACGGCTGGG > 1:9833426/1‑35 GCTTCGATAGCATTCTGAGACGCTTTACGGCTGGG > 1:17732445/1‑35 CTTCGATAGCATTCTGAGACGCTTTACGGCTGGGG > 1:8570269/1‑35 CTTCGATAGCATTCTGAGACGCTTTACGGCTGGGG > 1:8278007/1‑35 CTTCGATAGCATTCTGAGACGCTTTACGGCTGGGG > 1:7186942/1‑35 CTTCGATAGCATTCTGAGACGCTTTACGGCTGGGG > 1:18664796/1‑35 CTTCGATAGCATTCTGAGACGCTTTACGGCTGGGG > 1:5563828/1‑35 TTCGATAGCATTCTGAGACGCTTTACGGCTGGGGG > 1:7549252/1‑35 TTCGATAGCATTCTGAGACGCTTTACGGCTGGGGG > 1:15366508/1‑35 TTCGATAGCATTCTGAGACGCTTTACGGCTGGGGG > 1:18972715/1‑35 TTCGATAGCATTCTGAGACGCTTTACGGCTGGGGG > 1:15392482/1‑35 TCGATAGCATTCTGAGACGCTTTACGGCTGGGGGt > 1:9272602/1‑34 TCGATAGCATTCTGAGACGCTTTACGGCTGGGGGG > 1:9767902/1‑35 TCGATAGCATTCTGAGACGCTTTACGGCTGGGGGG > 1:15665337/1‑35 TCGATAGCATTCTGAGACGCTTTACGGCTGGGGGG > 1:521170/1‑35 TCGATAGCATTCTGAGACGCTTTACGGCTGGGGGG > 1:18902922/1‑35 TCGATAGCATTCTGAGACGCTTTACGGCTGGGGGG > 1:5001632/1‑35 TCGATAGCATTCTGAGACGCTTTACGGCTGGGGGG > 1:13673834/1‑35 CGATAGCATTCTGAGACGCTTTACGGCTGGGGGGg > 1:12739939/1‑34 CGATAGCATTCTGAGACGCTTTACGGCTGGGGGGT > 1:6675048/1‑35 CGATAGCATTCTGAGACGCTTTACGGCTGGGGGGT > 1:1328991/1‑35 CGATAGCATTCTGAGACGCCTTACGGCTGGGGGGT > 1:7010192/1‑35 GATAGCATTCTGAGACGCTTTACGGCTGGGGGGTT > 1:152181/1‑35 ATAGCATTCTGAGACGCTTTACGGCTGGGGGTTTT > 1:2317498/1‑35 ATAGCATTCTGAGACGCTTTACGGCTGGGGGTTTT > 1:18674926/1‑35 ATAGCATTCTGAGACGCTTTACGGCTGGGGGGTTT > 1:2992234/1‑35 TAGCATTCTGAGACGCTTTACGGCTGGGGGGTTTT > 1:6757197/1‑35 TAGCATTCTGAGACGCTTTACGGCTGGGGGGTTTT > 1:14445773/1‑35 TAGCATTCTGAGACGCTTTACGGCTGGGGGGTTTT > 1:6624441/1‑35 CATTCTGAGACGCTTTACGGCTGGGGGGTTTTtgc > 1:19484119/1‑32 CATTCTGAGACGCTTTACGGCTGGGGGGTTTTtcc > 1:4959003/1‑32 GGGGGTTTTGTGGATCCACCAGCGAGAATGTACGC > 1:7057531/1‑35 GGGGGTTTTGTGGATCCACCAGCGAGAATGTACGC > 1:316925/1‑35 GGGGGTTTTGTGGATCCACCAGCGAGAATGTACGC < 1:1420046/35‑1 GGGGGTTTTGTGGATCCACCAGCGAGAATGTACGC > 1:10544002/1‑35 CCGAACGCTTCGATAGCATTCTGAGACGCTTTACGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2966281‑2966320 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctggGGGGTTTTGTGGATCCACCAGCGAGAATGTACGC > REL606/3882316‑3882349 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |