New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2998284 =85 (0.830)9 (0.110) 4/40 NT 12.9% intergenic (+49/‑483) ECB_02798/yeeP conserved hypothetical protein/b1999; predicted GTP‑binding protein
?REL606 3832612 = 51 (0.600)coding (748/1149 nt) dgoD galactonate dehydratase

Only 100 of 131 total aligned reads displayed.

TGGGAGAGATCCGGTTGCAGAATCGAAATACCGCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGAG  >  REL606/3832578‑3832646
                                  |                                  
tGGGAGAGATCCGGTTGCAGAATCGAAATACCgcc                                    >  1:1336746/1‑35 (MQ=255)
 gggAGAGATCCGGTTGCAGAATCGAAATACTgcct                                   <  1:10787971/35‑1 (MQ=255)
 gggAGAGATCCGGTTGCAGAATCGAAATACCgcct                                   >  1:4321723/1‑35 (MQ=255)
 gggAGAGATCCGGTTGCAGAATCGAAATACCgcct                                   >  1:10416781/1‑35 (MQ=255)
  ggAGAGATCCGGTTGCAGAATCGAAATACCgcctg                                  >  1:16426840/1‑35 (MQ=255)
  ggAGAGATCCGGTTGCAGAATCGAAATACCgcctg                                  >  1:17993058/1‑35 (MQ=255)
   gagagaTCCGGTTGCAGAATCGAAATACCgcctgc                                 >  1:5701341/1‑35 (MQ=255)
   gagagaTCCGGTTGCAGAATCGAAATACCgcctgc                                 >  1:9627352/1‑35 (MQ=255)
    agagaTCCGGTTGCAGAATCGAAATACCgcctgcc                                >  1:11516384/1‑35 (MQ=255)
    agagaTCCGGTTGCAGAATCGAAATACCgcctgcc                                >  1:15554054/1‑35 (MQ=255)
      agaTCCGGTTGCAGAATCGAAATACCGCCTGCCTc                              >  1:19201645/1‑35 (MQ=255)
      agaTCCGGTTGCAGAATCGAAATACCGCCTGCCTc                              >  1:17440297/1‑35 (MQ=255)
       gaTCCGGTTGCAGAATCGAAATACCGCCTGCCTcc                             >  1:11529857/1‑35 (MQ=255)
       gaTCCGGTTGCAGAATCGAAATACCGCCTGCCTcc                             >  1:15505879/1‑35 (MQ=255)
       gaTCCGGTTGCAGAATCGAAATACCGCCTGCCTcc                             >  1:15797626/1‑35 (MQ=255)
       gaTCCGGTTGCAGAATCGAAATACCGCCTGCCTcc                             >  1:531426/1‑35 (MQ=255)
          ccGGTTGCAGAATCGAAATACCGCCTGCCTCCAGc                          >  1:11441260/1‑35 (MQ=255)
          ccGGTTGCAGAATCGAAATACCGCCTGCCTCCAGc                          >  1:5558936/1‑35 (MQ=255)
          ccGGTTGCAGAATCGAAATACCGCCTGCCTCCAGc                          >  1:12566490/1‑35 (MQ=255)
           cGGTTGCAGAATCGAAATACCGCCTGCCTCCAGCa                         >  1:2148171/1‑35 (MQ=255)
           cGGTTGCAGAATCGAAATACCGCCTGCCTCCAGCa                         >  1:13468290/1‑35 (MQ=255)
           cGGTTGCAGAATCGAAATACCGCCTGCCTCCAGCa                         >  1:7559307/1‑35 (MQ=255)
           cGGTTGCAGAATCGAAATACCGCCTGCCTCCAGCa                         >  1:16833162/1‑35 (MQ=255)
            ggTTGCAGAATCGAAATACCGCCTGCCTCCAGCAc                        >  1:7964914/1‑35 (MQ=255)
              ttGCAGAATCGAAATACCGCCTGCCTCCAGCAcgc                      >  1:5845943/1‑35 (MQ=255)
              ttGCAGAATCGAAATACCGCCTGCCTCCAGCAcgc                      >  1:12255943/1‑35 (MQ=255)
               tGCAAAATCGAAATACCGCCTGACTCCAGCAcgcg                     <  1:19173931/35‑1 (MQ=37)
                 cAGAATCGAAATACCGCCTGCCTCCAGCACGCGtt                   >  1:12926337/1‑35 (MQ=255)
                 cAGAATCGAAATACCGCCTGCCTCCAGCACGCGtt                   >  1:18729564/1‑35 (MQ=255)
                 cAGAATCGAAATACCGCCTGCCTCCAGCACGCGtt                   >  1:10191245/1‑35 (MQ=255)
                 aaaaacaaaacccccgcCTGCCTCCAGCACGCGtt                   <  1:1931793‑M2/18‑1 (MQ=255)
                 aaaaacaaaacccccgcCTGCCTCCAGCACGCGtt                   <  1:8554048‑M2/18‑1 (MQ=255)
                  aagacaaaccccccgcCTGCCTCCAGCACGCGttt                  <  1:12761471‑M2/19‑1 (MQ=255)
                  aaaacaaaacccccgcCTGCCTCCAGCACGCGttt                  <  1:5510524‑M2/19‑1 (MQ=255)
                  aaaacaaaacccccgcCTGCCTCCAGCACGCGttt                  <  1:16907034‑M2/19‑1 (MQ=255)
                  aGAATCGAAATACCGCCTGCCTCCAGCACGCGttt                  >  1:14438111/1‑35 (MQ=255)
                  aGAATCGAAATACCGCCTGCCTCCAGCACGCGttt                  >  1:9693809/1‑35 (MQ=255)
                   gAATCGAAATACCGCCTGCCTCCAGCACGCGTTTa                 >  1:8523093/1‑35 (MQ=255)
                   gAATCGAAATACCGCCTGCCTCCAGCACGCGTTTa                 >  1:11423776/1‑35 (MQ=255)
                    aaTCGAAATACCGCCTGCCTTCAGCACGCGTTTaa                >  1:3946365/1‑35 (MQ=255)
                     aTCGAAATACCGCCTGCCTCCAGCACGCGTTTaaa               >  1:16951091/1‑35 (MQ=255)
                     aTCGAAATACCGCCTGCCTCCAGCACGCGTTTaaa               >  1:18987159/1‑35 (MQ=255)
                     aTCGAAATACCGCCTGCCTCCAGCACGCGTTTaaa               >  1:9922184/1‑35 (MQ=255)
                      tCGAAATACCGCCTGCCTCCAGCACGCGTTTaaaa              >  1:19660026/1‑35 (MQ=255)
                      tCGAAATACCGCCTGCCTCCAGCACGCGTTTaaaa              >  1:18636124/1‑35 (MQ=255)
                       gaaacccccgcCTGCCTCCAGCACGCGTTTAAAAt             <  1:1095693‑M2/24‑1 (MQ=255)
                       cacacccccgcCTGCCTCCAGCACGCGTTTAAAAt             <  1:14471366‑M2/24‑1 (MQ=255)
                       cGAAATACCGCCTGCCTCCAGCACGCGTTTAAAAt             >  1:13274146/1‑35 (MQ=255)
                       cGAAATACCGCCTGCCTCCAGCACGCGTTTAAAAt             >  1:12391760/1‑35 (MQ=255)
                       cGAAATACCGCCTGCCTCCAGCACGCGTTTAAAAt             >  1:19176695/1‑35 (MQ=255)
                        gAAATACCGCCTGCCTCCAGCACGCGTTTAAAATc            >  1:5356846/1‑35 (MQ=255)
                        gAAATACCGCCTGCCTCCAGCACGCGTTTAAAATc            >  1:17744665/1‑35 (MQ=255)
                        gAAATACCGCCTGCCTCCAGCACGCGTTTAAAATc            >  1:6970975/1‑35 (MQ=255)
                        acacccccgcCTGCCTCCAGCACGCGTTTAAAATc            <  1:6619801‑M2/25‑1 (MQ=255)
                        aaacccccgcCTGCCTCCAGCACGCGTTTAAAATc            <  1:8381131‑M2/25‑1 (MQ=255)
                        aaacccccccCTGCCTCCAGCACGCGTTTAAAATc            <  1:6617621‑M2/25‑1 (MQ=255)
                         aacccccgcCTGCCTCCAGCACGCGTTTAAAATCg           <  1:6075725‑M2/26‑1 (MQ=255)
                         aacccccccCTGCCTCCAGCACGCGTTTAAAATCg           <  1:18282012‑M2/26‑1 (MQ=255)
                         aaaccccgcCTGCCTCCAGCACGCGTTTAAAATCg           <  1:4076652‑M2/26‑1 (MQ=255)
                         aaaTACCGCCTGCCTCCAGCACGCGTTTAACATCg           >  1:16005326/1‑35 (MQ=255)
                          gcccccgcCTGCCTCCAGCACGCGTTTAAAATCGa          <  1:14204878‑M2/27‑1 (MQ=255)
                          ccccccccCTGCCTCCAGCACGCGTTTAAAATCGa          <  1:6874083‑M2/27‑1 (MQ=255)
                          acccccgcCTGCCTCCAGCACGCGTTTAAAATCGa          <  1:10052074‑M2/27‑1 (MQ=255)
                          acccccccCTGCCTCCAGCACGCGTTTAAAATCGa          <  1:17006665‑M2/27‑1 (MQ=255)
                          aaTACCGCCTGCCTCCAGCACGCGTTTAAAATCGa          >  1:16536035/1‑35 (MQ=255)
                           cccccgcCTGCCTCCAGCACGCGTTTAAAATCGaa         <  1:11269290‑M2/28‑1 (MQ=255)
                           cccccgcCTGCCTCCAGCACGCGTTTAAAATCGaa         <  1:13987819‑M2/28‑1 (MQ=255)
                           accccgcCTGCCTCCAGCACGCGTTTAAAATCGaa         <  1:13267694‑M2/28‑1 (MQ=255)
                           aTACCGCCTGCCTCCATCACGCGTTTAAAATCGaa         >  1:353476/1‑35 (MQ=255)
                           aTACCGCCTGCCTCCAGCACGCGTTTAAAATCGaa         >  1:3255322/1‑35 (MQ=255)
                           aTACCGCCTGCCTCCAGCACGCGTTTAAAATCGaa         >  1:17245427/1‑35 (MQ=255)
                            tACCGCCTGCCTCCAGCACGCGTTTAAAATCGAAg        >  1:14760690/1‑35 (MQ=255)
                            tACCGCCTGCCTCCAGCACGCGTTTAAAATCGAAg        >  1:8855091/1‑35 (MQ=255)
                            tACCGCCTGCCTCCAGCACGCGTTTAAAATCGAAg        >  1:15731916/1‑35 (MQ=255)
                            tACCGCCTGCCTCCAGCACGCGTTTAAAATCGAAg        >  1:18427325/1‑35 (MQ=255)
                            ccccgcCTGCCTCCAGCACGCGTTTAAAATCGAAg        <  1:1961231‑M2/29‑1 (MQ=255)
                            ccccgcCTGCCTCCAGCACGCGTTTAAAATCGAAg        <  1:12447388‑M2/29‑1 (MQ=255)
                             cccgcCTGCCTCCAGCACGCGTTTAAAATCGAAGc       <  1:10462770‑M2/30‑1 (MQ=255)
                             cccgcCTGCCTCCAGCACGCGTTTAAAATCGAAGc       <  1:8490891‑M2/30‑1 (MQ=255)
                              ccgcCTGCCTCCAGCACGCGTTTAAAATCGAAGCg      >  1:14665207‑M2/5‑35 (MQ=255)
                              ccgcCTGCCTCCAGCACGCGTTTAAAATCGAAGCg      <  1:3470056‑M2/31‑1 (MQ=255)
                              cagcCTGCCTCCAGCACGCGTTTAAAATCGAAGCg      <  1:6871368‑M2/31‑1 (MQ=255)
                               cgcCTGCCTCCAGCACGCGTTTAAAATCGAAGCGt     <  1:6095588‑M2/32‑1 (MQ=255)
                               cgcCTGCCTCCAGCACGCGTTTAAAATCGAAGCGt     <  1:12565753‑M2/32‑1 (MQ=255)
                               cgcCTGCCTCCAGCACGCGTTTAAAATCGAAGCGt     >  1:14929973‑M2/4‑35 (MQ=255)
                               cgcCTGCCTCCAGCACGCGTTTAAAATCGAAGCGt     <  1:12441920‑M2/32‑1 (MQ=255)
                                gcCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTg    <  1:6601392‑M2/33‑1 (MQ=255)
                                gcCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTg    >  1:3133235‑M2/3‑35 (MQ=255)
                                gcCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTg    >  1:1112852‑M2/3‑35 (MQ=255)
                                gcCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTg    <  1:6758860‑M2/33‑1 (MQ=255)
                                gcCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTg    <  1:15645860‑M2/33‑1 (MQ=255)
                                 cCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGa   >  1:8979146‑M2/2‑35 (MQ=255)
                                 cCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGa   >  1:19477418‑M2/2‑35 (MQ=255)
                                 cCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGa   >  1:11770032‑M2/2‑35 (MQ=255)
                                 cCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGa   >  1:1816439‑M2/2‑35 (MQ=255)
                                 cCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGa   >  1:13356355‑M2/2‑35 (MQ=255)
                                 cCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGa   <  1:4871443‑M2/34‑1 (MQ=255)
                                 cCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGa   >  1:5315286‑M2/2‑35 (MQ=255)
                                  ctgcctCCAGCACGCGTTTAAAATGGAAGCGTgag  <  1:2273064/35‑1 (MQ=255)
                                  ctgcctCCAGCACGCGTTTAAAATCGAAGCGTgag  <  1:9036633/35‑1 (MQ=255)
                                  |                                  
TGGGAGAGATCCGGTTGCAGAATCGAAATACCGCCTGCCTCCAGCACGCGTTTAAAATCGAAGCGTGAG  >  REL606/3832578‑3832646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.