New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1 = | 0 (0.000) | 138 (1.340) | 44/48 | NT | 100% | intergenic (–/‑189) | –/thrL | –/thr operon leader peptide |
? | REL606 | = 4629812 | 0 (0.000) | intergenic (+24/–) | lasT/– | predicted rRNA methyltransferase/– |
Only 100 of 175 total aligned reads displayed.
TCACCAAATAAAAAACGCCTTAGTAAGTATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4629778‑4629812 | tCACCAAATAAAAAACGCCTTAGTAAGTATTTTTc < 1:20500032/35‑1 (MQ=255) cACCAAATAAAAAACGCCTTAGTAAGTATTTTTCa > 1:15919210‑M2/1‑34 (MQ=255) cACCAAATAAAAAACGCCTTAGTAAGTATTTTTCa < 1:1159136‑M2/35‑2 (MQ=255) aCCAAATAAAAAACGCCTTAGTAAGTATTTTTCag > 1:15561467‑M2/1‑33 (MQ=255) aCCAAATAAAAAACGCCTTAGTAAGTATTTTTCag > 1:20391163‑M2/1‑33 (MQ=255) aCCAAATAAAAAACGCCTTAGTAAGTATTTTTCag > 1:2836537‑M2/1‑33 (MQ=255) ccAAATAAAAAACGCCTTAGTAAGTATTTTTCagc > 1:7785479‑M2/1‑32 (MQ=255) ccAAATAAAAAACGCCTTAGTAAGTATTTTTCagc > 1:4523013‑M2/1‑32 (MQ=255) aaaTAAAAAACGCCTTAGTAAGTATTTTTCagctt < 1:1659285‑M2/35‑6 (MQ=255) aaaTAAAAAACGCCTTAGTAAGTATTTTTCagctt > 1:5612121‑M2/1‑30 (MQ=255) aaTAAAAAACGCCTTAGTAAGTATTTTTCagcttt > 1:3637612‑M2/1‑29 (MQ=255) aaTAAAAAACGCCTTAGTAAGTATTTTTCagcttt < 1:15657492‑M2/35‑7 (MQ=255) aaTAAAAAACGCCTTAGTAAGTATTTTTCagcttt > 1:20161296‑M2/1‑29 (MQ=255) aTAAAAAACGCCTTAGTAAGTATTTTTCagctttt > 1:8060942‑M2/1‑28 (MQ=255) aTAAAAAACGCCTTAGTAAGTATTTTTCagctttt > 1:1689522‑M2/1‑28 (MQ=255) tAAAAAACGCCTTAGTAAGTATTTTTCagcttttc > 1:6297113‑M2/1‑27 (MQ=255) tAAAAAACGCCTTAGTAAGTATTTTTCagcttttc > 1:8182524‑M2/1‑27 (MQ=255) tAAAAAACGCCTTAGTAAGTATTTTTCagcttttc > 1:3799087‑M2/1‑27 (MQ=255) tAAAAAACGCCTTAGTAAGTATTTTTCagcttttc > 1:11216469‑M2/1‑27 (MQ=255) tAAAAAACGCCTTAGTAAGTATTTTTCagcttttc > 1:3747789‑M2/1‑27 (MQ=255) aaaaaaCGCCTTAGTAAGTATTTTTCagctcttca < 1:9023592‑M2/35‑10 (MQ=255) aaaaaCGCCTTAGTAAGTATTTTTCagcttttcat > 1:17017762‑M2/1‑25 (MQ=255) aaaaaCGCCTTAGTAAGTATTTTTCagcttttcat > 1:4926768‑M2/1‑25 (MQ=255) aaaaCGCCTTAGTAAGTATTTTTCagcttttcatt > 1:7641035‑M2/1‑24 (MQ=255) aaaaCGCCTTAGTAAGTATTTTTCagcttttcatt > 1:8429812‑M2/1‑24 (MQ=255) aaaCGCCTTAGTAAGTATTTTTCagcttttcattc < 1:8836985‑M2/35‑13 (MQ=255) aaaCGCCTTAGTAAGTATTTTTCagcttttcattc < 1:7157‑M2/35‑13 (MQ=255) aaCGCCTTAGTAAGTATTTTTCagcttttcattct > 1:11379169‑M2/1‑22 (MQ=255) aaCGCCTTAGTAAGTATTTTTCagcttttcattct > 1:18771194‑M2/1‑22 (MQ=255) aaCGCCTTAGTAAGTATTTTTCagcttttcattct > 1:17690743‑M2/1‑22 (MQ=255) aaCGCCTTAGTAAGTATTTTTCagcttttcattct < 1:6441600‑M2/35‑14 (MQ=255) aaCGCCTTAGTAAGTATTTTTCagcttttcattct > 1:15645208‑M2/1‑22 (MQ=255) aCGCCTTAGTAAGTATTTTTCagcttttcattctg > 1:14569816‑M2/1‑21 (MQ=255) aCGCCTTAGTAAGTATTTTTCagcttttcattctg > 1:1318703‑M2/1‑21 (MQ=255) aCGCCTTAGTAAGTATTTTTCagcttttcattctg < 1:3021842‑M2/35‑15 (MQ=255) aCGCCTTAGTAAGTATTTTTCagcttttcattctg > 1:3314504‑M2/1‑21 (MQ=255) aCGCCTTAGTAAGTATTTTTCagcttttcattctg < 1:699895‑M2/35‑15 (MQ=255) aCGCCTTAGTAAGCATTTTTCagcttttcattctg < 1:19762767‑M2/35‑15 (MQ=255) cGCCTTAGTAAGTATTTTTCagcttttcattctga < 1:7357259‑M2/35‑16 (MQ=255) cGCCTTAGTAAGTATTTTTCagcttttcattctga < 1:17243050‑M2/35‑16 (MQ=255) cGCCTTAGTAAGTATTTTTCagcttttcattctga > 1:19551784‑M2/1‑20 (MQ=255) ccTTAGTAAGTATTTTTCagcttttcattctgact < 1:12794744‑M2/35‑18 (MQ=255) ccTTAGTAAGTATTTTTCagcttttcattctgact > 1:13759871‑M2/1‑18 (MQ=255) ccTTAGTAAGTATTTTTCagcttttcattctgact < 1:461549‑M2/35‑18 (MQ=255) cTTAGTAAGTATTTTTCagcttttcattctgactg > 1:3616282‑M2/1‑17 (MQ=255) cTTAGTAAGTATTTTTCagcttttcattctgactg > 1:5315748‑M2/1‑17 (MQ=255) cTTAGTAAGTATTTTTCagcttttcattctgactg > 1:9682316‑M2/1‑17 (MQ=255) cTTAGTAAGTATTTTTCagcttttcattctgactg < 1:16227911‑M2/35‑19 (MQ=255) ttAGTAAGTATTTTTCagcttttcattctgactgc < 1:5753221‑M2/35‑20 (MQ=255) ttAGTAAGTATTTTTCagcttttcattctgactgc > 1:7874839‑M2/1‑16 (MQ=255) ttAGTAAGTATTTTTCagcttttcattctgactgc > 1:522044‑M2/1‑16 (MQ=255) tAGTAAGTATTTTTCagcttttcattctgactgca < 1:11067715‑M2/35‑21 (MQ=255) tAGTAAGTATTTTTCagcttttcattctgactgca < 1:10690759‑M2/35‑21 (MQ=255) tAGTAAGTATTTTTCagcttttcattctgactgca > 1:2919640‑M2/1‑15 (MQ=255) tAGTAAGTATTTTTCagcttttcattctgactgca < 1:20013663‑M2/35‑21 (MQ=255) agtaagtaTTTTTCagcttttcattctgactgcaa < 1:20248857‑M2/35‑22 (MQ=255) agtaagtaTTTTTCagcttttcattctgactgcaa < 1:13419192‑M2/35‑22 (MQ=255) agtaagtaTTTTTCagcttttcattctgactgcaa > 1:14888647‑M2/1‑14 (MQ=255) gtaagtaTTTTTCagcttttcattctgactgcaac > 1:20463859‑M2/1‑13 (MQ=255) gtaagtaTTTTTCagcttttcattctgactgcaac > 1:15888911‑M2/1‑13 (MQ=255) taagtaTTTTTCagcttttcattctgactgcaacg < 1:7709741‑M2/35‑24 (MQ=255) taagtaTTTTTCagcttttcattctgactgcaacg < 1:5239187‑M2/35‑24 (MQ=255) taagtaTTTTTCagcttttcattctgactgcaacg < 1:13362912‑M2/35‑24 (MQ=255) taagtaTTTTTCagcttttcattctgactgcaacg > 1:179734‑M2/1‑12 (MQ=255) taagtaTTTTTCagcttttcattctgactgcaacg < 1:5874184‑M2/35‑24 (MQ=255) taagtaTTTTTCagcttttcattctgactgcaacg > 1:14175845‑M2/1‑12 (MQ=255) taagtaTTTTTCagcttttcattctgactgcaacg > 1:6004016‑M2/1‑12 (MQ=255) aagtaTTTTTCagcttttcattctgactgcaacgg < 1:13132585‑M2/35‑25 (MQ=255) aagtaTTTTTCagcttttcattctgactgcaacgg < 1:13949850‑M2/35‑25 (MQ=255) aagtaTTTTTCagcttttcattctgactgcaacgg < 1:14663728‑M2/35‑25 (MQ=255) aagtaTTTTTCagcttttcattctgactgcaacgg < 1:15181822‑M2/35‑25 (MQ=255) aagtaTTTTTCagcttttcattctgactgcaacgg < 1:19716525‑M2/35‑25 (MQ=255) agtaTTTTTCagcttttcattctgactgcaacggg > 1:12633690‑M2/1‑10 (MQ=255) agtaTTTTTCagcttttcattctgactgcaacggg < 1:16324393‑M2/35‑26 (MQ=255) agtaTTTTTCagcttttcattctgactgcaacggg < 1:1839053‑M2/35‑26 (MQ=255) agtaTTTTTCagcttttcattctgactgcaacggg < 1:19625990‑M2/35‑26 (MQ=255) agtaTTTTTCagcttttcattctgactgcaacggg < 1:10253143‑M2/35‑26 (MQ=255) agtaTTTTTCagcttttcattctgactgcaacggg > 1:910186‑M2/1‑10 (MQ=255) nnaTTNNTCagcttttcattctgactgcaacgggc > 1:20258472‑M2/1‑9 (MQ=255) gtaTTTTTCagcttttcattctgactgcaacgggc > 1:15072621‑M2/1‑9 (MQ=255) gtaTTTTTCagcttttcattctgactgcaacgggc > 1:12121598‑M2/1‑9 (MQ=255) gtaTTTTTCagcttttcattctgactgcaacgggc < 1:8322326‑M2/35‑27 (MQ=255) gtaTTTTTCagcttttcattctgactgcaacgggc > 1:4901699‑M2/1‑9 (MQ=255) gtaTTTTTCagcttttcattctgactgcaacgggc < 1:13672419‑M2/35‑27 (MQ=255) taTTTTTCagcttttcattctgactgcaacgggca < 1:17138680‑M2/35‑28 (MQ=255) aTTTTTCagcttttcattctgactgcaacgggcaa < 1:10408355‑M2/35‑29 (MQ=255) aTTTTTCagcttttcattctgactgaaacgggcaa > 1:8957497‑M2/1‑7 (MQ=255) tttttCagcttttcattctgactgcaacgggcaat > 1:14200957‑M2/1‑6 (MQ=255) tttttCagcttttcattctgactgcaacgggcaat > 1:9580031‑M2/1‑6 (MQ=255) ttttCagcttttcattctgactgcaacgggcaata < 1:3983259‑M2/35‑31 (MQ=255) tttCagcttttcattctgactgcaacgggcaatat > 1:12019818‑M2/1‑4 (MQ=255) tttCagcttttcattctgactgcaacgggcaatat < 1:20467417‑M2/35‑32 (MQ=255) ttCagcttttcattctgactgcaacgggcaatatg > 1:989113‑M2/1‑3 (MQ=255) ttCagcttttcattctgactgcaacgggcaatatg < 1:5455580‑M2/35‑33 (MQ=255) tCagcttttcattctgactgcaacgggcaatatgt > 1:18217169‑M2/1‑2 (MQ=255) cagcttttcattctgactgcaacgggcaatatgtc < 1:6491259‑M2/35‑35 (MQ=255) cagcttttcattctgactgcaacgggcaatatgtc < 1:4261549‑M2/35‑35 (MQ=255) cagcttttcattctgactgcaacgggcaatatgtc > 1:9643794‑M2/1‑1 (MQ=255) cagcttttcattctgactgcaacgggcaatatgtc > 1:13847329‑M2/1‑1 (MQ=255) cagcttttcattctgactgcaacgggcaatatgtc > 1:10155585‑M2/1‑1 (MQ=255) | TCACCAAATAAAAAACGCCTTAGTAAGTATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4629778‑4629812 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |