New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 805852 = | 114 (1.110) | 112 (1.380) | 8/38 | NT | 55.4% | intergenic (+279/‑300) | bioD/uvrB | dethiobiotin synthetase/excinuclease ABC subunit B |
? | REL606 | = 1193676 | NA (NA) | noncoding (62/768 nt) | IS1 | repeat region |
Only 100 of 866 total aligned reads displayed.
ACCAGTTAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/805864‑805852 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCCACTGGAGCACCTCAAAAACACCATCATAC < REL606/1193676‑1193643 ||||| CAGCTAAAAAAAAAAAAAGCCACTGGAGCACCTCA < 1:8133529/35‑1 AGTTAATAAAAAAAAAAGCCACTGGAGCACCTCAA < 1:9022072/35‑1 ggTAAAAAAAAAAAAAGCCACTGGAGCACCTCAAA < 1:6611989/33‑1 gcgAAAAAAAAAAAAAGCCACTGGAGCACCTCAAA < 1:20366474/32‑1 gcgAAAAAAAAAAAAAGCCACTGGAGCACCTCAAA < 1:3017733/32‑1 gcTAAAAAAAAAAAAAGCCACTGGAGCACCTCAAA < 1:14540080/33‑1 caTAAAAAAAAAAAAAGCCACTGGAGCACCTCAAA < 1:20584961/33‑1 tgAAAAAAAAAAAAAGCCACTGGAGCACCTCAAAA < 1:6106262/33‑1 ggAAAAAAAAAAAAGCCACTGGAGCACCTCAAAAA < 1:15043562/33‑1 TAATAAAAAAAAAAGCCACTGGAGCACCTCAAAAA < 1:9512571/35‑1 TAAAAAAAAAAAAAGCCACTGGAGCACCTCAAAAA < 1:17135306/35‑1 TAAAAAAAAAAAAAGCCACTGGAGCACCTCAAAAA < 1:15853762/35‑1 gAAAAAAACAAAAGCCACTGGAGCACCTCAAAAAC < 1:4938840/34‑1 gAAAAAAAAAAAAGCCACTGGAGCACCTCAAAAAC < 1:12771244/34‑1 aatAAAAAAAAAAGCCACTGGAGCACCTCAAAAAC < 1:1896962/32‑1 AAAAAAAACAAAAGCCACTGGAGCACCTCAAAAAC < 1:14024876/35‑1 AAAAAAAAAAAAAGCCACTGGAGCACCTCAAAAAC < 1:7625078/35‑1 AAAAAAAAAAAAAGCCACTGGAGCACCTCAAAAAC < 1:924548/35‑1 AAAAAAAAAAAAAGCCACTGGAGCACCTCAAAAAC < 1:4320416/35‑1 AAAAAAAAAAAAAGCCACTGGAGCACCTCAAAAAC < 1:4136707/35‑1 AAAAAAACAAAAGCCACTGGAGCACCTCAAAAACA < 1:5637369/35‑1 AAAAAAACAAAAGCCACTGGAGCACCTCAAAAACA < 1:19907240/35‑1 AAAAAAAAAAAAGCCACTGGAGCACCTCAAAAACA < 1:14429800/35‑1 tAAAAACAAAAGCCACTGGAGCACCTCAAAAACAC < 1:728430/34‑1 aagAAAAAAAAGCCACTGGAGCACCTCAAAAACAC < 1:12891553/32‑1 AAAAACAAAAAGCCACTGGAGCACCTCAAAAACAC < 1:20480776/35‑1 AAAAAACAAAAGCCACTGGAGCACCTCAAAAACAC < 1:3398724/35‑1 AAAAAACAAAAGCCACTGGAGCACCTCAAAAACAC < 1:15661384/35‑1 AAAAAACAAAAGCCACTGGAGCACCTCAAAAACAC < 1:8785700/35‑1 AAAAAAAAAAAGCCACTGGAGCACCTCAAAAACAC < 1:17919730/35‑1 AAAAAAAAAAAGCCACTGGAGCACCTCAAAAACAC < 1:16655367/35‑1 AAAAACAAAAGCCACTGGAGCACCTCAAAAACACN < 1:194437/35‑1 AAAAACAAAAGCCACTGGAGCACCTCAAAAACACC < 1:13302439/35‑1 AAAAACAAAAGCCACTGGAGCACCTCAAAAACACC < 1:14254635/35‑1 AAAAACAAAAGCCACTGGAGCACCTCAAAAACACC < 1:11918011/35‑1 AAAAAAAAAAGCCACTGGAGCACCTCAAAAACACC < 1:1256210/35‑1 AAAAAAAAAAGCCACTGGAGCACCTCAAAAACACC < 1:11154930/35‑1 AAAACAAAAGCCACTGGAGCACCTCAAAAACACCA < 1:1608940/35‑1 AAAAAAAAAGCCACTGGAGCACCTCAAAAACACCA < 1:18082540/35‑1 AAAAAAAAAGCCACTGGAGCACCTCAAAAACACCA < 1:18336505/35‑1 AAAAAAAAAGCCACTGGAGCACCTCAAAAACACCA < 1:11299890/35‑1 AAACAAAAGCCACTGGAGCACCTCAAAAACACCAT < 1:18822437/35‑1 AAACAAAAGCCACTGGAGCACCTCAAAAACACCAT < 1:3797061/35‑1 AAACAAAAGCCACTGGAGCACCTCAAAAACACCAT < 1:540611/35‑1 AAAAAAAAGCCACTGGAGCACCTCAAAAACACCAT < 1:19220885/35‑1 AAAAAAAAGCCACTGGAGCACCTCAAAAACACCAT < 1:19684295/35‑1 AAAAAAAAGCCACTGGAGCACCTCAAAAACACCAT < 1:8014877/35‑1 AAAAAAAAGCCACTGGAGCACCTCAAAAACACCAT < 1:8282971/35‑1 AAAAAAAAGCCACTGGAGCACCTCAAAAACACCAT < 1:14959953/35‑1 aacAAAAGCCACTGGAGCACCTCAAAAACACCATC < 1:17659202/32‑1 aacAAAAGCCACTGGAGCACCTCAAAAACACCATC < 1:16837927/32‑1 aacAAAAGCCACTGGAGCACCTCAAAAACACCATC < 1:13674034/32‑1 aacAAAAGCCACTGGAGCACCTCAAAAACACCATC < 1:13502928/32‑1 AAAAAAAGCCACTGGAGCACCTCAAAAACACCATC < 1:2842399/35‑1 AAAAAAAGCCACTGGAGCACCTCAAAAACACCATC < 1:11465696/35‑1 AAAAAAAGCCACTGGAGCACCTCAAAAACACCATC < 1:4821590/35‑1 AAAAAAAGCCACTGGAGCACCTCAAAAACACCATC < 1:13115400/35‑1 AAAAAAAGCCACTGGAGCACCTCAAAAACACCATC < 1:6346919/35‑1 AAAAAAAGCCACTGGAGCACCTAAAAAACACCATC < 1:13819778/35‑1 ccAAAAGCCACTGGAGCACCTCAAAAACACCATCA < 1:3954191/33‑1 acAAAAGCCACTGGAGCACCTCAAAAACACCATCA < 1:11008358/33‑1 acAAAAGCCACTGGAGCACCTCAAAAACACCATCA < 1:8350476/33‑1 acAAAAGCCACTGGAGCACCTCAAAAACACCATCA < 1:12090160/33‑1 AAAAAAGCCACTGGAGCACCTCAAAAACACCATCA < 1:5873811/35‑1 AAAAAAGCCACTGGAGCACCTCAAAAACACCATCA < 1:10785711/35‑1 AAAAAAGCCACTGGAGCACCTCAAAAACACCATCA < 1:11690172/35‑1 AAAAAAGCCACTGGAGCACCTCAAAAACACCATCA < 1:12238292/35‑1 AAAAAAGCCACTGGAGCACCTCAAAAACACCATCA < 1:14661572/35‑1 AAAAAAGCCACTGGAGCACCTCAAAAACACCATCA < 1:77752/35‑1 AAAAAAGCCACTGGAGCAACTCAAAAACACCATCA < 1:4479527/35‑1 cAAAAGCCACTGGAGCACCTCAAAAACACCATCAT < 1:16286557/34‑1 cAAAAGCCACTGGAGCACCTCAAAAACACCATCAT < 1:16453717/34‑1 cAAAAGCCACTGGAGCACCTCAAAAACACCATCAT < 1:3195686/34‑1 cAAAAGCCACTGGAGCACCTCAAAAACACCATCAT < 1:2205836/34‑1 cAAAAGCCACTGGAGCACCTCAAAAACACCATCAT < 1:10391366/34‑1 AAAAAGCCACTGGAGCACCTCAAAAACACCATCAT < 1:12419747/35‑1 AAAAAGCCACTGGAGCACCTCAAAAACACCATCAT < 1:17840449/35‑1 AAAAAGCCACTGGAGCACCTCAAAAACACCATCAT < 1:5315888/35‑1 AAAAGCCACTGGAGCACCTCAAAAACTCCATCATA < 1:2741656/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:846727/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:7078606/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:9669206/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:9825019/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:1000720/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:4720197/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:3527054/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:10563647/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:233112/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:1472194/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:18454031/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:17319064/35‑1 AAAAGCCACTGGAGCACCTCAAAAACACCATCATA < 1:15474024/35‑1 AAAGCCACTGGAGCACCTCAAAAACACCATCATAC < 1:10204609/35‑1 AAAGCCACTGGAGCACCTCAAAAACACCATCATAC < 1:15215638/35‑1 AAAGCCACTGGAGCACCTCAAAAACACCATCATAC < 1:17016344/35‑1 AAAGCCACTGGAGCACCTCAAAAACACCATCATAC < 1:17489449/35‑1 AAAGCCACTGGAGCACCTCAAAAACACCATCATAC < 1:20130871/35‑1 AAAGCCACTGGAGCACCTCAAAAACACCATCATAC < 1:7471326/35‑1 AAAGCCACTGGAGCACCTCAAAAACACCATCATAC < 1:6866814/35‑1 AAAGCCACTGGAGCACCTCAAAAACACAATCATAC < 1:2473832/35‑1 ||||| ACCAGTTAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/805864‑805852 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCCACTGGAGCACCTCAAAAACACCATCATAC < REL606/1193676‑1193643 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |