New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 923960 = | 74 (0.720) | 7 (0.090) | 3/36 | NT | 8.9% | coding (1030/1431 nt) | ybjT | conserved protein with NAD(P)‑binding Rossmann‑fold domain |
? | REL606 | 3472589 = | 88 (1.140) | coding (758/879 nt) | yhgA | predicted transposase |
Only 100 of 188 total aligned reads displayed.
AGTTTAATGACTATTGCGGAAAGATTGCGGCAGGAGGGGGAACAATCCAAAGCCCTGCATATAGCCAAA > REL606/3472555‑3472623 | agTTTAATGACTATTGCGGAAAGATTGCGGCagga < 1:3697501/35‑1 (MQ=255) gTTTAATGACTATTGCGGAAAGATTGCGGCaggag < 1:1299604/35‑1 (MQ=255) aacgtccgccagccttgctgctttatggcaggggg > 1:17642712‑M2/33‑35 (MQ=255) aacgtccgccagccttgctgctttatggcaggggg > 1:7020724‑M2/33‑35 (MQ=255) aacgtccgccagccttgctgctttatggcaggggg > 1:4303964‑M2/33‑35 (MQ=255) ttAATGACTATTGCGGAGAGATTGCGGCAGGAggg < 1:6907222/35‑1 (MQ=255) ttAATGACTATTGCGGAAAGATTGCGGCAGGGggg > 1:6695498/1‑35 (MQ=255) ttAATGACTATTGCGGAAAGATTGCGGCAGGGggg > 1:12105132/1‑35 (MQ=255) ttAATGACTATTGCGGAAAGATTGCGGCAGGAggg < 1:11921236/35‑1 (MQ=255) acgtccgccagccttgctgctttatggcaggGggg > 1:937109‑M2/32‑35 (MQ=255) acgtccgccagccttgctgctttatggcaggGggg > 1:12968281‑M2/32‑35 (MQ=255) gtccgccagccttgctgctttatggcaggggggga > 1:19774989‑M2/30‑34 (MQ=255) gtccgccagccttgctgctttatggcaggGggggg > 1:646292‑M2/30‑35 (MQ=255) aaTGACTATTGCGGAAAGATTGCGGCAGGAggggg < 1:8039235/35‑1 (MQ=255) aTGACTNTTGCGGAAAGATTGCGGCAGGGgggggg > 1:3847443/1‑34 (MQ=37) aTGACTATTGCTGAACGGCTAAGGCAGGGgggggg > 1:20121794/1‑34 (MQ=21) aTGACTATTGCGGAAAGATTGCGGCAGGGgggggg > 1:5643256/1‑34 (MQ=255) aTGACTATTGCGGAAAGATTGCGGCAGGGgggggg > 1:1303474/1‑34 (MQ=255) tGACTATTGCTGAACGGCTACGGCAGGGgggggcg > 1:137804/1‑33 (MQ=25) tGACTATTGCGGAAAGATTGCGGCAGGGgggggga > 1:7964262/1‑33 (MQ=37) tGACTATTGCGGAAAGATTGCGGCAGGAGGGGGaa < 1:13199790/35‑1 (MQ=255) ccgccagccttgctgctttatggcaggGGGGGgac > 1:5685130‑M2/28‑34 (MQ=255) gACTATTGCTGAACGGCTACGGCAGGGggggggtg > 1:6345766/1‑32 (MQ=25) gACTATTGCTGAACGGCTACGGCAGGGggggggtc > 1:17104341/1‑32 (MQ=25) gACTATTGCTGAACGGCTACGGCAGGGggggggtc > 1:9559745/1‑32 (MQ=25) gACTATTGCGGAAAGATTGCGGCAGGGggggggag > 1:14986759/1‑32 (MQ=25) gACTATTGCGGAAAGATTGCGGCAGGGggggggaa > 1:13665188/1‑32 (MQ=25) gACTATTGCGGAAAGATTGCGGCAGGGGGGGGGAc > 1:18575162/1‑35 (MQ=25) gACTATTGCGGAAAGATTGCGGCAGGAGGGGGAAc < 1:1234012/35‑1 (MQ=255) gccagccttgctgctttatggcaggGGGGGGAACa > 1:9410367‑M2/26‑35 (MQ=255) aCTATTGCGGAAAGATTGCGGCAGGGGGGGGGACa > 1:8999212/1‑35 (MQ=25) nnaNTNNGGAAAGATTGCGGCAGGAGGGGGAACaa < 1:8854203/33‑1 (MQ=38) ccagccttgctgctttatggcaggGGGGGGAACaa > 1:2042494‑M2/25‑35 (MQ=255) cTATTGCGGAAAGATTGCGGCAGGAGGGGGAACaa < 1:5351101/35‑1 (MQ=255) tATTGCGGAAAGATTGCGGCAGGGGGGGGGACaag > 1:19488234/1‑34 (MQ=25) tATTGCGGAAAGATTGCGGCAGGGGGGGGGACaaa > 1:15876386/1‑34 (MQ=25) tATTGCGGAAAGATTGCGGCAGGAGGGGGAACAAt < 1:2277707/35‑1 (MQ=255) aTTGCGGAAAGATTGCGGCAGGAGGGGGGACaaac > 1:5505484/1‑33 (MQ=37) aTTGCGGAAAGATTGCGGCAGGAGGGGGAACAATc < 1:12359679/35‑1 (MQ=255) ttGCGGAAAGATTGCGGCAGGAGGGGGAACAATcc < 1:8205307/35‑1 (MQ=255) ttGCGGAAAGATTGCGGCAGGAGGGGGAACAATcc < 1:7751496/35‑1 (MQ=255) tGCGGAAAGATTGCGGCAGGGGGGGGGAGAATccc > 1:3565307/1‑34 (MQ=21) tGCGGAAAGATTGCGGCAGGGGGGGGGACAATCCa > 1:1357650/1‑35 (MQ=25) tGCGGAAAGATTGCGGCAGGAGGGGGAACAATCCa < 1:10874033/35‑1 (MQ=255) gCGGAAAGATTGCGGCAGGAGGGGGAACAATCCaa < 1:10076316/35‑1 (MQ=255) cGGAAAGATTGCGGCAGGGGGGGGGACAATCCaaa > 1:2477827/1‑35 (MQ=37) cGGAAAGATTGCGGCAGGGGGGGGGACAATCCaaa > 1:5409420/1‑35 (MQ=37) cGGAAAGATTGCGGCAGGAGGGGGAACAATCCaaa < 1:458246/35‑1 (MQ=255) cGGAAAGATTGCGGCAGGAGGGGGAACAATCCaaa < 1:19103360/35‑1 (MQ=255) cGGAAAGATTGCGGCAGGAGGGGGAACAATCCaaa < 1:3109844/35‑1 (MQ=255) ggAAAGATTGCGGCAGGGGGGGGGGCAAAACAAAg > 1:469906/1‑35 (MQ=12) ggAAAGATTGCGGCAGGAGGGGGAACAATCCAAAg < 1:18807964/35‑1 (MQ=255) ggAAAGATTGCGGCAGGAGGGGGAACAATCCAAAg < 1:14623029/35‑1 (MQ=255) ggAAAGATTGCGGCAGGAGGGGGAACAATCCAAAg < 1:6181692/35‑1 (MQ=255) gAAAGATTGCGGCAGGAGGGGGAACAATCCAAAGc < 1:11402203/35‑1 (MQ=255) gAAAGATTGCGGCAGGAGGGGGAACAATCCAAAGc < 1:1800269/35‑1 (MQ=255) aaaGATTGCGGCAGGAGGGGGAACAATCCAAAGcc < 1:19244963/35‑1 (MQ=255) aaGATTGCGGCAGGGGGGGGGACAATCCAAAGccc > 1:2500450/1‑35 (MQ=37) aaGATTGCGGCAGGAGGGGGAACAATCCAAAGccc < 1:5783991/35‑1 (MQ=255) aaGATTGCGGCAGGAGGGGGAACAATCCAAAGccc < 1:16036906/35‑1 (MQ=255) aaGATTGCGGCAGGAGGGGGAACAATCCAAAGccc < 1:6891916/35‑1 (MQ=255) aaGATTGCGGCAGGAGGGGGAACAATCCAAAGacc < 1:15640120/35‑1 (MQ=255) aGATTGCGGCAGGAGGGGGAACAATCCAAAGCCCt < 1:6685990/35‑1 (MQ=255) aTTGCGGCAGGAGGGGGAACAATCCAAAGCCCTGc < 1:958000/35‑1 (MQ=255) aTTGCGGCAGGAGGGGGAACAATCCAAAGCCCTGc < 1:11057939/35‑1 (MQ=255) ttGCGGCAGGAGGGGGAACAATCCAAAGCCCTGCa < 1:18838903/35‑1 (MQ=255) tGCGGCAGGGGGGGGGACAATCCAAAGACCCGCat > 1:20321197/1‑35 (MQ=19) tGCGGCAGGAGGGGGAACAATCCAAAGCCCTGCat < 1:16392080/35‑1 (MQ=255) gCGGCAGGAGGGGGAACAATCCAAAGCCCTGCata < 1:5080916/35‑1 (MQ=255) gCGGCAGGAGGGGGAACAATCCAAAGCCCTGCata < 1:1567503/35‑1 (MQ=255) cGGCAGGAGGGGGAACAATCCAAAGCCCTGCatat < 1:13137336/35‑1 (MQ=255) cGGCAGGAGGGGGAACAATCCAAAGCCCTGCatat < 1:10766387/35‑1 (MQ=255) cGGCAGGAGGGGGAACAATCCAAAGCCCTGCatat < 1:172540/35‑1 (MQ=255) cGGCAGGAGGGGGAACAATCCAAAGCCCTGCatat < 1:3503006/35‑1 (MQ=255) ggcaggAGGGGGAACAATCCAAAGCCCTGCAtata < 1:13426732‑M2/29‑1 (MQ=255) ggcaggAGGGGGAACAATCCAAAGCCCTGCAtata > 1:14664755‑M2/7‑35 (MQ=255) ggcaggAGGGGGAACAATCCAAAGCCCTGCAtata > 1:5226133‑M2/7‑35 (MQ=255) gcaggAGGGGGAACAATCCAAAGCCCTGCATATAg < 1:2344286‑M2/30‑1 (MQ=255) gcaggAGGGGGAACAATCCAAAGCCCTGCATATAg < 1:6629345‑M2/30‑1 (MQ=255) gcaggAGGGGGAACAATCCAAAGCCCTGCATATAg < 1:4186111‑M2/30‑1 (MQ=255) gcaggAGGGGGAACAATCCAAAGCCCTGCATATAg < 1:4529630‑M2/30‑1 (MQ=255) caggAGGGGGAACAATCCAAAGCCCTGCATATAGc > 1:5758066‑M2/5‑35 (MQ=255) caggAGGGGGAACAATCCAAAGCCCTGCATATAGc > 1:14413924‑M2/5‑35 (MQ=255) aggAGTGGGAACAATCCAAAGCCCTGCATATAGcc > 1:11471039‑M2/4‑35 (MQ=255) aggAGGGGGAACAATCCAAAGCCCTGCATATAGcc > 1:8757093‑M2/4‑35 (MQ=255) aggAGGGGGAACAATCCAAAGCCCTGCATATAGcc > 1:8321688‑M2/4‑35 (MQ=255) aggAGGGGGAACAATCCAAAGCCCTGCATATAGcc > 1:10414587‑M2/4‑35 (MQ=255) aggAGGGGGAACAATCCAAAGCCCTGCATATAGcc > 1:14842520‑M2/4‑35 (MQ=255) aggAGGGGGAACAATCCAAAGCCCTGCATATAGcc > 1:4271255‑M2/4‑35 (MQ=255) aggAGGGGGAACAATCCAAAGCCCTCCATATAGcc > 1:4713059‑M2/4‑35 (MQ=255) gAGGGGGAACAATCCAAAGCCCTGCATATAGCCaa > 1:13105425‑M2/2‑35 (MQ=255) gAGGGGGAACAATCCAAAGCCCTGCATATAGCCaa < 1:12861921‑M2/34‑1 (MQ=255) gAGGGGGAACAATCCAAAGCCCTGCATATAGCCaa > 1:7189769‑M2/2‑35 (MQ=255) aggGGGAACAATCCAAAGCCCTGCATATAGCCaaa > 1:2022283/1‑35 (MQ=255) aggGGGAACAATCCAAAGCCCTGCATATAGCCaaa > 1:145065/1‑35 (MQ=255) aggGGGAACAATCCAAAGCCCTGCATATAGCCaaa > 1:263706/1‑35 (MQ=255) aggGGGAACAATCCAAAGCCCTGCATATAGCCaaa > 1:40085/1‑35 (MQ=255) aggGGGAACAATCCAAAGCCCTGCATATAGCCaaa > 1:1025331/1‑35 (MQ=255) aggGGGAACAATCCAAAGCCCTGCATATAGCCaaa > 1:15699024/1‑35 (MQ=255) aggGGGAACAATCCAAAGCCCTGCATATAGCCaaa > 1:9678177/1‑35 (MQ=255) | AGTTTAATGACTATTGCGGAAAGATTGCGGCAGGAGGGGGAACAATCCAAAGCCCTGCATATAGCCAAA > REL606/3472555‑3472623 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |