New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1539621 = | 78 (0.760) | 8 (0.100) | 4/38 | NT | 13.6% | coding (51/2400 nt) | dos | cAMP phosphodiesterase, heme‑regulated |
? | REL606 | = 3363882 | 40 (0.490) | coding (771/1290 nt) | rrmB | 16S rRNA m5C967 methyltransferase, S‑adenosyl‑L‑methionine‑dependent |
ACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCAC > REL606/3363848‑3363916 | aCGGTGAACACATTTTGGATCTTTGTGCCGccccc > 1:9409499/1‑35 (MQ=255) aCGGTGAACACATTTTGGATCTTTGTGCCGccccc > 1:8870683/1‑35 (MQ=255) aCGGTGAACACATTTTGGATCTTTGTGCCGccccc < 1:18806760/35‑1 (MQ=255) aCGGTGAACACATTTTGGATCTTTGTACCGccccc > 1:12812523/1‑35 (MQ=255) cGGTGAACACATTTTGGATCTTTGTGCCGCCCCCg < 1:17123629‑M2/35‑2 (MQ=255) cGGTGAACACATTTTGGATCTTTGTGCCGCCCCCg > 1:8033970‑M2/1‑34 (MQ=255) cGGTGAACACATTTTGGATCTTTGTGCCGCCCCCg > 1:10368893‑M2/1‑34 (MQ=255) cGGTGAACACATTTTGGATCTTTGTGCCGCCCCCg < 1:18748705‑M2/35‑2 (MQ=255) ggTGAACACATTTTGGATCTTTGTGCCGCCCCCgg > 1:4610040‑M2/1‑33 (MQ=255) ggTGAACACATTTTGGATCTTTGTGCCGCCCCCgg < 1:19526442‑M2/35‑3 (MQ=255) ggTGAACACATTTTGGATCTTTGTGCCGCCCCCgg < 1:13307573‑M2/35‑3 (MQ=255) gTGAACACATTTTGGATCTTTGTGCCGCCCCCggc > 1:9953363‑M2/1‑32 (MQ=255) gTGAACACATTTTGGATCTTTGTGCCGCCCCCggc < 1:10184431‑M2/35‑4 (MQ=255) gTGAACACATTTTGGATCTTTGTGCAGCCCCCggc > 1:5518761‑M2/1‑32 (MQ=255) tGAACACATTTTGGATCTTTGTGCCGCCCCCggcg < 1:4148125‑M2/35‑5 (MQ=255) tGAACACATTTTGGATCTTTGTGCCGCCCCCggcg < 1:11383578‑M2/35‑5 (MQ=255) gAACACATTTTGGATCTTTGTGCCGCCCCCggcgg < 1:19729640‑M2/35‑6 (MQ=255) gAACACATTTTGGATCTTTGTGCCGCCCCCggcgg < 1:18136557‑M2/35‑6 (MQ=255) aaCACATTTTGGATCTTTGTGCCGCCCCCggcggg < 1:11898487‑M2/35‑7 (MQ=255) aaCACATTTTGGATCTTTGTGCCGCCCCCggcggg < 1:8532131‑M2/35‑7 (MQ=255) aaCACATTTTGGATCTTTGTGCCGCCCCCGGCGGt < 1:19641699/35‑1 (MQ=255) aaCACATTTTGGATCTTTGTGCCGCCCCCGGCGGt < 1:18500960/35‑1 (MQ=255) aaCACATTTTGGATCTTTGTGCCGCCCCCGGCGGt < 1:781882/35‑1 (MQ=255) aaCACATTTTGGATCTTTGTGCCGCCCCCGGCGGt < 1:9930961/35‑1 (MQ=255) acacATTTTGGATCTTTGTGCCGCCCCCGGCGGTa < 1:6561409/35‑1 (MQ=255) cacaTTTTGGATCTTTGTGCCGCCCCCGGCGGTaa < 1:11877991/35‑1 (MQ=255) cacaTTTTGGATCTTTGTGCCGCCCCCGGCGGTaa < 1:3793039/35‑1 (MQ=255) acaTTTTGGATCTTTGTGCCGCCCCCGGCGGTaaa < 1:2725948/35‑1 (MQ=255) acaTTTTGGATCTTTGTGCCGCCCCCGGCGGTaaa < 1:4668366/35‑1 (MQ=255) caTTTTGGATCTTTGTGCCGCCCACGGCGGTaaaa < 1:11836777/35‑1 (MQ=255) tttttGGATCTTTGTGCCGCCCCCGGCGGTAAaac < 1:18801850/34‑1 (MQ=255) aTTTTGGATCTTTGTGCCGCCCCCggcggggaaaa < 1:2635236‑M2/35‑12 (MQ=255) ttttGGATCTTTGTGCCGCCCCCggcggggaaaaa < 1:16223364‑M2/35‑13 (MQ=255) ttttGGATCTTTGTGCCGCCCCCggcggggaaaaa < 1:18958961‑M2/35‑13 (MQ=255) ttttGGATCTTTGTGCCGCCCCCGGCGGTAAaaca < 1:3561353/35‑1 (MQ=255) ttttGGATCTTTGTGCCGCCCCCGGCGGTAAaaca < 1:15255954/35‑1 (MQ=255) tttGGATCTTTGTGCCGCCTCCGGCGGGGAaacaa > 1:11347078/1‑35 (MQ=25) tttGGATCTTTGTGCCGCCCCCggcggggaaacaa < 1:15364491‑M2/35‑14 (MQ=255) tttGGATCTTTGTGCCGCCCCCggcggggaaaaaa < 1:20202255‑M2/35‑14 (MQ=255) tttGGATCTTTGTGCCGCCCCCggcggggaaaaaa < 1:527614‑M2/35‑14 (MQ=255) ttGGATCTTTGTGCCGCCCCCggcggggaaaaaaa < 1:8707507‑M2/35‑15 (MQ=255) ttGGATCTTTGTGCCGCCCCCGGCGGTAAaacaac < 1:5369592/35‑1 (MQ=255) ttGGATCTTTGTGCCGCCCCCGGCGGTAAaacaac < 1:9558200/35‑1 (MQ=255) tGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACg < 1:11662412/35‑1 (MQ=255) tGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACg < 1:17319016/35‑1 (MQ=255) tGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACg < 1:11273451/35‑1 (MQ=255) tGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACg < 1:15309569/35‑1 (MQ=255) ggATCTTTGTGCCGCCCCCggcggggaaaaaaagc < 1:13586159‑M2/35‑17 (MQ=255) ggATCTTTGTGCCGCCCCCggcggggaaaaaaaaa < 1:16714079‑M2/35‑17 (MQ=255) ggATCTTTGTGCCGCCCCCGGCGGTAAAACAACGc < 1:8088421/35‑1 (MQ=255) ggATCTTTGTGCCGCCCCCGGCGGTAAAACAACGc < 1:2136446/35‑1 (MQ=255) ggATCTTTGTGCCGCCCCCGGCGGGGAAACAACGc > 1:13635753/1‑35 (MQ=37) gATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCa < 1:3125965/35‑1 (MQ=255) gATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCa < 1:3574867/35‑1 (MQ=255) gATCTTTGTGCCGCCCCCGGCGGGGAAAAAACGCa > 1:14470780/1‑35 (MQ=25) aTCTTTGTGCCGCCCCCGGCGGTAAAACAACGCat < 1:9377722/35‑1 (MQ=255) aTCTTTGTGCCGCCCCCGGCGGTAAAACAACGCat < 1:6390102/35‑1 (MQ=255) aTCTTTGTGCCGCCCCCGGCGGGGAAAAAACACac > 1:19106490/1‑34 (MQ=16) tCTTTGTGCCGCCCCCGGCGGTAAAACAACGCata < 1:10242873/35‑1 (MQ=255) tCTTTGTGCCGCCCCCGGCGGTAAAACAACGCata < 1:19420872/35‑1 (MQ=255) tCTTTGTGCCGCCCCCGGCGGTAAAACAACGCata < 1:17877747/35‑1 (MQ=255) tCTTTGTGCCGCCCCCGGCGGGGAAACAAAACata > 1:18919106/1‑35 (MQ=16) cTTTGTGCCGCCCCCGGCGGTAAAACAACGCatat < 1:15115115/35‑1 (MQ=255) tttGTGCCGCCCCCGGCGGTAAAACAACGCATATc < 1:3482667/35‑1 (MQ=255) tttGTGCCGCCCCCGGCGGTAAAACAACGCATATc < 1:3746224/35‑1 (MQ=255) ttGTGCCGCCCCCGGCGGTAAAACAACGCATATcc < 1:18271403/35‑1 (MQ=255) ttGTGCCGCCCCCGGCGGTAAAACAACGCATATcc < 1:3247452/35‑1 (MQ=255) ttGTGCCGCCCCCGGCGGTAAAACAACGCATATcc < 1:12782378/35‑1 (MQ=255) tgtgCCGCCCCCGGCGGTAAAACAACGCATATCCt < 1:2034476/35‑1 (MQ=255) gtgCCGCCCCCGGCGGTAAAACAACGCATATACtt < 1:4278263/35‑1 (MQ=255) tgCCGCCCCCGGCGGTAAAACAACGCATATCCTTg < 1:5637387/35‑1 (MQ=255) tgCCGCCCCCGGCGGTAAAACAACGCATATCCTTg < 1:5668711/35‑1 (MQ=255) cgccCCCGGCGGTAAAACAACGCATATCCTTGAgg < 1:8162086/35‑1 (MQ=255) cgccCCCGGCGGTAAAACAACGCATATCCTTGAgg < 1:9983483/35‑1 (MQ=255) cgccCCCGGCGGTAAAACAACGCATATCCTTGAgg < 1:6667130/35‑1 (MQ=255) cgccCCCGGCGGTAAAACAACGCATATCCTTGAgg < 1:12270260/35‑1 (MQ=255) gccCCCGGCGGTAAAACAACGCATATCCTTGAGGt < 1:8045666/35‑1 (MQ=255) gccCCCGGCGGTAAAACAACGCATATCCTTGAGGt < 1:8746610/35‑1 (MQ=255) gccCCCGGCGGTAAAACAACGCATATCCTTGAGGt < 1:17993016/35‑1 (MQ=255) cccccGGCGGTAAAACAACGCATATACTTGAGGTg < 1:19201367/35‑1 (MQ=255) ccccGGCGGTAAAACAACGCATATCCTTGAGGTgg < 1:687390/35‑1 (MQ=255) ccccGGCGGTAAAACAACGCATATCCTTGAGGTgg < 1:29843/35‑1 (MQ=255) ccccGGCGGTAAAACAACGCATATCCTTGAGGTgg < 1:15903404/35‑1 (MQ=255) ccccGGCGGTAAAACAACGCATATCCTTGAGGTgg < 1:10179034/35‑1 (MQ=255) cccGGCGGTAAAACAACGCATATCCTTGAGGTGGc < 1:14806275/35‑1 (MQ=255) cccGGCGGTAAAACAACGCATATCCTTGAGGTGGc < 1:9660256/35‑1 (MQ=255) ccGGCGGTAAAACAACGCATATCCTTGAGGTGGCa < 1:5696735/35‑1 (MQ=255) ccGGCGGTAAAACAACGCATATCCTTGAGGTGGCa < 1:14063539/35‑1 (MQ=255) cggcggTAAAACAACGCATATCCTTGAGGTGGCAc < 1:7402254/35‑1 (MQ=255) cggcggTAAAACAACGCATATCCTTGAGGTGGCAc < 1:15130690/35‑1 (MQ=255) | ACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCAC > REL606/3363848‑3363916 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |