New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2900731 | 92 (0.900) | 9 (0.110) | 3/40 | NT | 13.3% | coding (82/771 nt) | yqeC | hypothetical protein |
? | REL606 | 4370910 = | 41 (0.480) | intergenic (+97/+173) | glyY/yjeS | tRNA‑Gly/predicted Fe‑S electron transport protein |
TCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2900694‑2900731 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcCTCAGGCTGTAATCTTAATTTCAAAGAAACTTCG > REL606/4370910‑4370943 tccGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC < 1:3477834/32‑1 TCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC > 1:18728536/1‑35 TCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC > 1:2464899/1‑35 TCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC > 1:17878627/1‑35 TCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC < 1:3991868/35‑1 TCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC < 1:13370255/35‑1 TCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC < 1:10005673/35‑1 TCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCC > 1:8864986/1‑35 ctcCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA < 1:948370/32‑1 CTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA < 1:6932931/35‑1 CTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA > 1:6885774/1‑35 CTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA < 1:14855704/35‑1 CTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA < 1:3899021/35‑1 CTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA < 1:358164/35‑1 CTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA > 1:9016480/1‑35 CTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA < 1:17291301/35‑1 CTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCA > 1:17359564/1‑35 gGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAG < 1:13957744/34‑1 TGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAG > 1:217273/1‑35 TGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAG > 1:17831976/1‑35 TGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAG < 1:16869266/35‑1 TGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAG > 1:16761265/1‑35 GCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAGC < 1:14733318/35‑1 agaTTTCCCCCCAGCCTCAGGCTGTAATCTTAATT < 1:1322952/32‑1 GGTTTTCCCCCCAGCCTCAGGCTGTAATCTTAATT < 1:7261011/35‑1 aTTTCCCCCCAGCCTCAGGCTGTAATCTTAATTTC < 1:2779359/34‑1 aTTTCCCCCCAGCCTCAGGCTGTAATCTTAATTTC < 1:9793257/34‑1 aTTTCCCCCCAGCCTCAGGCTGTAATCTTAATTTC < 1:1331012/34‑1 TTTTCCCCCCAGCCTCAGGCTGTAATCTTAATTTC < 1:6951668/35‑1 TTTCCCCCCAGCCTCAGGCTGTAATCTTAATTTCA < 1:2296185/35‑1 TTTCCCCCCAGCCTCAGGCTGTAATCTTAATTTCA < 1:17567557/35‑1 TTTACCCCCAGCCTCAGGCTGTAATCTTAATTTCA < 1:3037177/35‑1 taCCCCCAGCCTCAGGCTGTAATCTTAATTTCAAA < 1:7674614/33‑1 aCCCCCAGCCTCAGGCTGTAATCTTAATTTCAAAG < 1:97567/34‑1 aCCCCCAGCCTCAGGCTGTAATCTTAATTTCAAAG < 1:17509686/34‑1 CCCCCCAGCCTCAGGCTGTAATCTTAATTTCAAAG < 1:16732276/35‑1 CCCCCCAGCCTCAGGCTGTAATCTTAATTTCAAAG < 1:16662428/35‑1 CCCCCAGCCTCAGGCTGTAATCTTAATTTCAAAGA < 1:8186920/35‑1 CCCCCAGCCTCAGGCTGTAATCTTAATTTCAAAGA < 1:5109541/35‑1 CCCCAGCCTCAGGCTGTAATCTTAATTTCAAAGAA < 1:11631308/35‑1 CCCCAGCCTCAGGCTGTAATCTTAATTTCAAAGAA < 1:7189374/35‑1 CCCCAGCCTCAGGCTGTAATCTTAATTTCAAAGAA < 1:18180398/35‑1 CCCAGCCTCAGGCTGTAATCTTAATTTCAAAGAAA < 1:385628/35‑1 CCAGCCTCAGGCTGTAATCTTAATTTCAAAGAAAC < 1:3149275/35‑1 CCAGCCTCAGGCTGTAATCTTAATTTCAAAGAAAC < 1:12299406/35‑1 CCAGCCTCAGGCTGTAATCTTAATTTCAAAGAAAC < 1:12059952/35‑1 CAGCCTCAGGCTGTAATCTTAATTTCAAAGAAACT < 1:13972433/35‑1 CAGCCTCAGGCTGTAATCTTAATTTCAAAGAAACT < 1:13905647/35‑1 CAGCCTAAGGCTGTAATCTTAATTTCAAAGAAACT < 1:15319638/35‑1 AGCCTCAGGCTGTAATCTTAATTTCAAAGAAACTT > 1:12827926/1‑35 AGCCTCAGGCTGTAATCTTAATTTCAAAGAAACTT < 1:19604087/35‑1 GCCTCAGGCTGTAATCTTAATTTCAAAGAAACTTC < 1:2086155/35‑1 CCTCAGGCTGTAATCTTAATTTCAAAGAAACTTCG < 1:6677884/35‑1 CCTCAGGCTGTAATCTTAATTTCAAAGAAACTTCG < 1:4873618/35‑1 TCTGCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2900694‑2900731 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcCTCAGGCTGTAATCTTAATTTCAAAGAAACTTCG > REL606/4370910‑4370943 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |