New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2768160 | 116 (1.130) | 20 (0.210) | 7/44 | NT | 16.8% | coding (39/324 nt) | ygbE | conserved inner membrane protein |
? | REL606 | 4085858 = | 92 (0.980) | intergenic (+56/‑93) | cpxP/fieF | periplasmic protein combats stress/ferrous iron efflux protein F |
Only 100 of 255 total aligned reads displayed.
GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGTCGTTATTTGTTAGTGTAATGTTATGGCTATTAC > REL606/2768126‑2768194 | gTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTG > 1:18725541‑M1/1‑35 (MQ=255) tGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGt < 1:6987662/35‑1 (MQ=255) tGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGg > 1:16085740‑M1/1‑34 (MQ=255) tGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGg > 1:1719083‑M1/1‑34 (MQ=255) tGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGg > 1:4962658‑M1/1‑34 (MQ=255) gACCATGTGGTTTCTTCATCCTCAGTAAGGCTGgg > 1:18614003‑M1/1‑33 (MQ=255) gACCATGTGGTTTCTTCATCCTCAGTAAGGCTGgg > 1:8750485‑M1/1‑33 (MQ=255) gACCATGTGGTTTCTTCATCCTCAGTAAGGCTGgg > 1:3618251‑M1/1‑33 (MQ=255) gACCATGTGGTTTCTTCATCCTCAGTAAGGCTGgg > 1:4685313‑M1/1‑33 (MQ=255) gACCATGTGGTTTCTTCATCCTCAGTAAGGCTGTc < 1:15079585/35‑1 (MQ=255) gACCATGTGGTTTCTTCATCCTCAGTAAGGCTGTc < 1:7739819/35‑1 (MQ=255) gACCATGTGGTTTCTTCATCCTCAGTAAGGCTGTc < 1:7680313/35‑1 (MQ=255) aCCATGTGGTTTCTTCATCCTCAGTAAGTCTGTCg > 1:12138923/1‑35 (MQ=255) aCCATGTGGTTTCTTCATCCTCAGTAAGGCTGggg > 1:9621143‑M1/1‑32 (MQ=255) aCCATGTGGTTTCTTCATCCTCAGTAAGGCTGggg > 1:10110961‑M1/1‑32 (MQ=255) aCCATGTGGTTTCTTCATCCTCAGTAAGGCTGTCg < 1:5802201/35‑1 (MQ=255) aCCATGTGGTTTCTTCATCCTCAGTAAGGCTGTCg < 1:2107111/35‑1 (MQ=255) aCCATGTGGTTTCTTCATCCTCAGTAAGGCTGTCg < 1:19781007/35‑1 (MQ=255) aCCATGTGGTTTCTTCATCCTCAGTAAGGCTGTCg < 1:18922708/35‑1 (MQ=255) ccATGTGGTTTCTTCATCCTCAGTAAGGCTGTCGt < 1:6856352/35‑1 (MQ=255) ccATGTGGTTTCTTCATCCTCAGTAAGGCTGTCGt < 1:14157909/35‑1 (MQ=255) cATGTGGTTTCTTCATCCTCAGTAAGGCTGTCGtt < 1:5918294/35‑1 (MQ=255) cATGTGGTTTCTTCATCCTCAGTAAGGCTGTCGtt < 1:8411126/35‑1 (MQ=255) cATGTGGTTTCTTCATCCTCAGTAAGGCTGTCGtt < 1:10429746/35‑1 (MQ=255) cATGTGGTTTCTTCATCCTCAGTAAGGCTGTCGtt < 1:17850571/35‑1 (MQ=255) cATGTCGTTTCTTCATCCTCAGTAAGGCTGggggt > 1:9937418‑M1/1‑30 (MQ=255) aTGTGGTTTCTTCATCCTCAGTAAGGCTGTCGTTa < 1:2158198/35‑1 (MQ=255) aTGTGGTTTCTTCATCCTCAGTAAGGCTGGCgctt > 1:16927148/1‑32 (MQ=38) tgtgGTTTCTTCATCCTCAGTAAGGCTGTCGTTAt < 1:11825628/35‑1 (MQ=255) tgtgGTTTCTTCATCCTCAGTAAGGCTGTCGTTAt < 1:7493742/35‑1 (MQ=255) gtgGTTTCTTCATCCTCAGTAAGGCTGTCGTTAtt < 1:15621894/35‑1 (MQ=255) tgGTTTCTTCATCCTCAGTAAGGCTGggggttttt > 1:19651193‑M1/1‑26 (MQ=255) tgGTTTCTTCATCCTCAGTAAGGCTGggggttttt > 1:11784946‑M1/1‑26 (MQ=255) tgGTTTCTTCATCCTCAGTAAGGCTGTCGTTAttt < 1:14935329/35‑1 (MQ=255) ggTTTCTTCATCCTCAGTAAGGCTGgggttttttt > 1:9421558‑M1/1‑25 (MQ=255) ggTTTCTTCATCCTCAGTAAGGCTGTCGTTATTTg < 1:6344509/35‑1 (MQ=255) ggTTTCCTCATCCTCAGTAAGGCTGTCGTTATTTg < 1:11556251/35‑1 (MQ=255) gTTTCTTCATCCTCAGTAAGGCTGgggtttttttt > 1:19281010‑M1/1‑24 (MQ=255) gTTTCTTCATCCTCAGTAAGGCTGggggttttttt > 1:7969943‑M1/1‑24 (MQ=255) gTTTCTTCATCCTCAGTAAGGCTGggggttttttt > 1:15192530‑M1/1‑24 (MQ=255) gTTTCTTCATCCTCAGTAAGGCTGTCGTTATTTGt < 1:8332308/35‑1 (MQ=255) gTTTCTTCATCCTCAGTAAGGCTGTCGTTATTTGt < 1:5310969/35‑1 (MQ=255) gTTTCTTCATCCTCAGTAAGGCTGTCGTTATTTGt < 1:3330933/35‑1 (MQ=255) tttCTTCATCCTCAGTAAGGCTGTCGTTATTTGtt < 1:9330761/35‑1 (MQ=255) tttCTTCATCCTCAGTAAGGCTGTCGTTATTTGtt < 1:10148225/35‑1 (MQ=255) tttCTTCATCCTCAGTAAGGCTGTCGTTATTTGtt < 1:19844103/35‑1 (MQ=255) tttCTTCATCCTCAGTAAGGCTGTAGTTATTTGtt < 1:16212123/35‑1 (MQ=255) ttcttcATCCTCAGTAAGGCTGTCGTTATTTGTTa < 1:13231600/35‑1 (MQ=255) ttcttcATCCTCAGTAAGGCTGTCGTTATTTGTTa < 1:9786770/35‑1 (MQ=255) ttcttcATCCTCAGTAAGGCTGTCGTTATTTGTTa < 1:2912719/35‑1 (MQ=255) tcttcATCCTCAGTAAGGCTGTCGTTATTTGTTAg < 1:12575289/35‑1 (MQ=255) tcttcATCCTCAGTAAGGCTGTCGTTATTTGTTAg < 1:8285681/35‑1 (MQ=255) tcttcATCCTCAGTAAGGCTGTCGTTATTTGTTAg < 1:17709491/35‑1 (MQ=255) cttcATCCTCAGTAAGGCTGTCGTTATTTGTTAgt < 1:4052336/35‑1 (MQ=255) cttcATCCTCAGTAAGGCTGTCGTTATTTGTTAgt < 1:4745978/35‑1 (MQ=255) cttcATCCTCAGTAAGGCTGTCGTTATTTGTTAgt < 1:16509320/35‑1 (MQ=255) ttcATCCTCAGTAAGGCTGTCGTTATTTGTTAgtg < 1:13762817/35‑1 (MQ=255) ttcATCCTCAGTAAGGCTGTCGTTATTTGTTAgtg < 1:41914/35‑1 (MQ=255) tcATCCTCAGTAAGGCTGTCGTTATTTGTTAgtgt < 1:11299540/35‑1 (MQ=255) tcATCCTCAGTAAGGCTGTCGTTATTTGTTAgtgt < 1:2552965/35‑1 (MQ=255) aTCCTCAGTAAGGCTGTCGTTATTTGTTAGTGTaa < 1:16786934/35‑1 (MQ=255) aTCCTCAGTAAGGCTGTCGTTATTTGTTAGTGTaa < 1:3520092/35‑1 (MQ=255) aTCCTCAGTAAGGCTGTCGTTATTTGTTAGTGTaa < 1:20046058/35‑1 (MQ=255) tCCTCAGTAAGGCTGTCGTTATTTGTTAGTGTAAt < 1:20398911/35‑1 (MQ=255) ccTCAGTAAGGCTGTCGTTATTTGTTAGTGTAATg < 1:12040071/35‑1 (MQ=255) ccTCAGTAAGGCTGTCGTTATTTGTTAGTGTAATg < 1:4502507/35‑1 (MQ=255) cTCAGTAAGGCTGTCGTTATTTGTTAGTGTAATGt < 1:10340430/35‑1 (MQ=255) cTCAGTAAGGCTGTCGTTATTTGTTAGTGTAATGt < 1:15535241/35‑1 (MQ=255) cTCAGTAAGGCTGTCGTTATTTGTTAGTGTAATGt < 1:3720423/35‑1 (MQ=255) tCAGTAAGGCTGTCGTTATTTGTTAGTGTAATGtt < 1:13360507/35‑1 (MQ=255) tCAGTAAGGCTGTCGTTATTTGTTAGTGTAATGtt < 1:20165075/35‑1 (MQ=255) cAGTAAGGCTGTCGTTATTTGTTAGTGTAATGTTa < 1:2471492/35‑1 (MQ=255) aGTAAGGCTGTCGTTATTTGTTAGTGTAATGTTAt < 1:4265280/35‑1 (MQ=255) aGTAAGGCTGTCGTTATTTGTTAGTGTAATGTTAt < 1:17297577/35‑1 (MQ=255) gTAAGGCTGTCGTTATTTGTTAGTGTAATGTTATg < 1:12634353/35‑1 (MQ=255) gTAAGGCTGTCGTTATTTGTTAGTGTAATGTTATg < 1:16555857/35‑1 (MQ=255) tAAGGCTGTCGTTATTTGTTAGTGTAATGTTATgg < 1:15767099/35‑1 (MQ=255) tAAGGCTGTCGTTATTTGTTAGTGTAATGTTATgg < 1:9198828/35‑1 (MQ=255) aaGGCTGTCGTTATTTGTTAGTGTAATGTTATGGc < 1:39454/35‑1 (MQ=255) aaGGCTGTCGTTATTTGTTAGTGTAATGTTATGGc < 1:12804481/35‑1 (MQ=255) aaGGCTGTCGTTATTTGTTAGTGTAATGTTATGGc < 1:7246517/35‑1 (MQ=255) aGGCTGTCGTTATTTGTTAGTGTAATGTTATGGCt < 1:6280227/35‑1 (MQ=255) aGGCTGTCGTTATTTGTTAGTGTAATGTTATGGCt < 1:3113083/35‑1 (MQ=255) aGGCTGTCGTTATTTGTTAGTGTAATGTTATGGCt < 1:14792843/35‑1 (MQ=255) aGGCTGTCGTTATTTGTTAGTGTAATGTTATGGCt < 1:8962682/35‑1 (MQ=255) aGGCTGTCGTTATTTGTTAGTGTAATGTTATGGCt < 1:10765447/35‑1 (MQ=255) ggCTGTCGTTATTTGTTAGTGTAATGTTATGGCTa < 1:20302993/35‑1 (MQ=255) ggCTGTCGTTATTTGTTAGTGTAATGTTATGGCTa < 1:1410323/35‑1 (MQ=255) ggCTGTCGTTATTTGTTAGTGTAATGTTATGGCTa < 1:6521519/35‑1 (MQ=255) ggCTGTCGTTATTTGTTAGTGTAATGTTATGGCTa < 1:17471059/35‑1 (MQ=255) gCTGTCGTTATTTGTTAGTGTAATGTTATGGCTaa > 1:18381394/1‑34 (MQ=255) gCTGTCGTTATTTGTTAGTGTAATGTTATGGCTaa > 1:1233107/1‑34 (MQ=255) gCTGTCGTTATTTGTTAGTGTAATGTTATGGCTAt < 1:18056258/35‑1 (MQ=255) cTGTCGTTATTTGTTAGTGTAATGTTATGGCTaaa > 1:13653457/1‑33 (MQ=255) cTGTCGTTATTTGTTAGTGTAATGTTATGGCTAtt < 1:11237860/35‑1 (MQ=255) cTGTCGTTATTTGTTAGTGTAATGTTATGGCTAtt < 1:9250377/35‑1 (MQ=255) tGTCGTTATTTGTTAGTGTAATGTTATGGCTaaaa > 1:7975575/1‑32 (MQ=255) tGTCGTTATTTGTTAGTGTAATGTTATGGCTaaaa > 1:10562568/1‑32 (MQ=255) tGTCGTTATTTGTTAGTGTAATGTTATGGCTATTa < 1:120726/35‑1 (MQ=255) gTCGTTATTTGTTAGTGTAATGTTATGGCTATTAc < 1:3842937/35‑1 (MQ=255) | GTGACCATGTGGTTTCTTCATCCTCAGTAAGGCTGTCGTTATTTGTTAGTGTAATGTTATGGCTATTAC > REL606/2768126‑2768194 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |