New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 418706983 (0.810)13 (0.170) 5/36 NT 15.8% coding (49/1590 nt) purH bifunctionalphosphoribosylaminoimidazolecarboxam ide formyltransferase/IMP cyclohydrolase
?REL606 = 4402608 76 (0.990)intergenic (+67/+62) sgaE/yjfY L‑ribulose 5‑phosphate 4‑epimerase/hypothetical protein

GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/4187030‑4187069
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctttTTTTGAAAAACGGCTGCGGAATTAGACCAGTTAT  <  REL606/4402608‑4402575
                                                                          
GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG                                         <  1:10336442/35‑1
GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG                                         <  1:7321746/35‑1
GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG                                         <  1:6716926/35‑1
GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG                                         >  1:17806677/1‑35
GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG                                         >  1:15811713/1‑35
GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG                                         <  1:18445854/35‑1
GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG                                         >  1:19391300/1‑35
GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG                                         <  1:20345333/35‑1
GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCG                                         <  1:20002461/35‑1
 TGCGGAAAGTGCCTGGGCGAATTCGACGATACCGG                                        >  1:16155157/1‑35
 TGCGGAAAGTGCCTGGGCGAATTCGACGATACCGG                                        <  1:16896466/35‑1
 TGCGGAAAGTGCCTGGGCGAATTCGACGATACCGG                                        <  1:13300529/35‑1
 TGCGGAAAGTGCCTGGGCGAATTCGACGATACCGG                                        <  1:4125728/35‑1
  GCGGAAAGTGCCTGGGCGAATTCGACGATACCGGC                                       >  1:19116729/1‑35
  GCGGAAAGTGCCTGGGCGAATTCGACGATACCGGC                                       >  1:3814523/1‑35
   CGGAAAGTGCCTGGGCGAATTCGACGATACCGTCT                                      >  1:14897289/1‑35
   CGGAAAGTGCCTGGGCGAATTCGACGATACCGGCT                                      <  1:1920131/35‑1
   CGGAAAGTGCCTGGGCGAATTCGACGATACCGGCT                                      >  1:15469193/1‑35
    GGAAAGTGCCTGGGCGAATTCGACGATACCGGCTT                                     <  1:18901531/35‑1
    GGAAAGTGCCTGGGCGAATTCGACGATACCGGCTT                                     >  1:5753435/1‑35
    GGAAAGTGCCTGGGCGAATTCGACGATACCGGCTT                                     >  1:8747916/1‑35
    GGAAAGTGCCTGGGCGAATTCGACGATACCGGCTT                                     >  1:9971432/1‑35
    GGAAAGTGCCTGGGCGAATTCGACGATACCGGCTT                                     <  1:13660480/35‑1
    GGAAAGTGCATGGGCGAATTCGACGATACCGGCTT                                     <  1:18944569/35‑1
     GAAAGTGCCTGGGCGAATTCGGCGATACCGGCTTT                                    <  1:12237830/35‑1
     GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT                                    >  1:5427390/1‑35
     GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT                                    >  1:17392109/1‑35
     GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT                                    <  1:7870730/35‑1
     GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT                                    >  1:18386881/1‑35
     GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT                                    >  1:6435753/1‑35
     GAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT                                    >  1:6414047/1‑35
      AAAGTGCCTGGGCGAATTCGACGATACCGGCTTTT                                   >  1:5751959/1‑35
      AAAGTGCCTGGGCGAATTCGACGATACCGGCTTTT                                   >  1:11441834/1‑35
      AAAGTGCCTGGGCGAATTCGACGATACCGGCTTTT                                   >  1:6076953/1‑35
       AAGTGCCTGGGCGAATTCGACGATACCGGCTTTTT                                  >  1:15855480/1‑35
       AAGTGCCTGGGCGAATTCGACGATACCGGCTTTTT                                  >  1:19663981/1‑35
        AGTTCCTGGGCGAATTCGACGATACCGGCTTTTTc                                 >  1:2126150/1‑34
        AGTGCCTGGGCGAATTCGACGATACCGGCTTTTTT                                 >  1:6489228/1‑35
         GTGCCTGGGCGAATTCGACGATACCGGCTTTTTca                                >  1:8365941/1‑33
          TGCCTGGGCGAATTCGACGATACCGGCTTTTTCTG                               >  1:8617602/1‑35
          TGCCTGGGCGAATTCGACGATACAGGCTTTTTTTa                               >  1:3426095/1‑34
           GCCTGGGCGAATTCGACGATACCGGCTTTTTTaca                              >  1:7788883/1‑32
            CCTGGGCGAATTCGACGATACCGGCTTTTTTTGAA                             >  1:7917367/1‑35
            CCTGGGCGAATTCGACGATACCGGCTTTTTTAGAA                             >  1:6114756/1‑35
             CTGGGCGAATTCGACGATACCGGCTTTTTTTGAAA                            >  1:12905056/1‑35
              TGGGCGAATTCGACGATACCGGCTTTTTTTGAAAA                           >  1:16634873/1‑35
              TGGGCGAATTCGACGATACCGGCTTTTTTTGAAAA                           >  1:19044980/1‑35
              TGGGCGAATTCGACGATACCGGCTTTTTTAGAAAc                           >  1:13407386/1‑34
               GGGCGAATTCGACGATACCGGCTTTTTTTGAAAAA                          >  1:5182341/1‑35
                GGCGAATTCGACGATACCGGCTTTTTTTGAAACAC                         >  1:10819775/1‑35
                GGCGAATTCGACGATACCGGCTTTTTTCGAAAAAa                         >  1:10131480/1‑34
                GGCGAATTCGACGATACCGGCTTTTTTAGAAAAAa                         >  1:19478113/1‑34
                  CGAATTCGACGATACCGGCTTTTTTTGAAAAACcg                       >  1:17311248/1‑33
                   GAATTCGACGATACCGGCTTTTTTTGAAAAACtga                      >  1:20597282/1‑32
                   GAATTCGACGATACCGGCTTTTTTTGAAAAACtca                      >  1:17985605/1‑32
                                  GGCTTTTTTTGAAAAACGGCTGCGGAATTAGACCA       <  1:1924920/35‑1
                                  GGCTTTTTTTGAAAAACGGCTGCGGAATTAGACCA       <  1:4319175/35‑1
                                  GGCTTTTTTTGAAAAACGGCTGCGGAATTAGACCA       >  1:4648186/1‑35
                                  GGCTTTTTTTGAAAAACGGCTGCGGAATTAGACCA       <  1:18931760/35‑1
                                  GGCTTTTTTTGAAAAACGGCCGCGGAATTAGACCA       >  1:5410087/1‑35
                                   GCTTTTTTTGAAAAACGGCTGCGGAATTAGACCAG      <  1:7614877/35‑1
                                   GCTTTTTTTGAAAAACGGCTGCGGAATTAGACCAG      <  1:5822437/35‑1
                                   GCTTTTTTTGAAAAACGGCTGCGGAATTAGACCAG      <  1:19076849/35‑1
                                    CTTTTTTTGAAAAACGGCTGCGGAATTAGACCAGT     <  1:14662376/35‑1
                                    CTTTTTTTGAAAAACGGCTGCGGAATTAGACCAGT     >  1:14344770/1‑35
                                    CTTTTTTTGAAAAACGGCTGCGGAATTAGACCAGT     <  1:17521877/35‑1
                                    CTTTTTTTGAAAAACGGCTGCGGAATTAGACCAGT     <  1:3755404/35‑1
                                     TTTTTTTGAAAAACGGCTGCGGAATTAGACCAGTT    >  1:2052818/1‑35
                                     TTTTTTTGAAAAACGGCTGCGGAATTAGACCAGTT    <  1:3237325/35‑1
                                     TTTTTTTGAAAAACGGCTGCGGAATTAGACCAGTT    <  1:14907281/35‑1
                                     TTTTTTTGAAAAACGGCTGCGGAATTAGACCAGTT    <  1:14352927/35‑1
                                      TTTTTTGAAAAACGGCTGCGGAATTAGACCAGTTA   <  1:18424991/35‑1
                                      TTTTTTGAAAAACGGCTGCGGAATTAGACCAGTTA   <  1:15890470/35‑1
                                      TTTTTTGAAAAACGGCTGCGGAATTAGACCAGTTA   <  1:1384223/35‑1
                                       TTTTTGAAAAACGGCTGCGGAATTAGACCAGTTAT  >  1:10444375/1‑35
                                       TTTTTGAAAAACGGCTGCGGAATTAGACCAGTTAT  <  1:10415131/35‑1
                                       TTTTTGAAAAACGGCTGCGGAATTAGACCAGTTAT  <  1:9854235/35‑1
                                                                          
GTGCGGAAAGTGCCTGGGCGAATTCGACGATACCGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/4187030‑4187069
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctttTTTTGAAAAACGGCTGCGGAATTAGACCAGTTAT  <  REL606/4402608‑4402575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.