New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1398219 | 108 (1.050) | 6 (0.090) | 3/32 | NT | 8.5% | coding (725/1527 nt) | abgT | predicted cryptic aminobenzoyl‑glutamate transporter |
? | REL606 | = 1743481 | 58 (0.850) | coding (2472/3057 nt) | ydiJ | predicted FAD‑linked oxidoreductase |
Only 100 of 245 total aligned reads displayed.
TGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTAT > REL606/1398185‑1398253 | tGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATT > 1:20597456‑M1/1‑35 (MQ=255) tGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATT > 1:2177645‑M1/1‑35 (MQ=255) gTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTg > 1:18300485/1‑35 (MQ=255) gTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTg > 1:12474332/1‑35 (MQ=255) gTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTg > 1:5336691/1‑35 (MQ=255) tCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGa > 1:18149038/1‑35 (MQ=255) tCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGa > 1:10831110/1‑35 (MQ=255) tCTGAAGTTTCTCATCGCTGTTTCCCTGCCATTGa < 1:7953389/35‑1 (MQ=255) cTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGAc > 1:20282464/1‑35 (MQ=255) tGCAGTTTCTCATCGCTGTTTCCCTGCCATTGAcc > 1:13717751/1‑35 (MQ=255) tGCAGTTTCTCATCGCTGTTTCCATGCCATTGAcc < 1:17841563/35‑1 (MQ=255) gCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCt > 1:6027659/1‑35 (MQ=255) gCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCt < 1:6123189/35‑1 (MQ=255) cAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTa < 1:14991114/35‑1 (MQ=255) cAGTTTCTCATCGCTGTTTCCATGCCATTGGCCTa < 1:1918863/35‑1 (MQ=37) attttCTCATCGCTGTTTCCCTGCCATTGACCTaa < 1:19717036/33‑1 (MQ=255) aGTTTCTCATCGCTGTTTCCCTGCCATTGACCTaa > 1:5645331/1‑35 (MQ=255) gTTTCCCATCGCTGTTTCCCTGCCATTGACCTAAc < 1:18582230/35‑1 (MQ=255) tttCTCATCGCTGTTTCCCTGCCATTGACCTAAcc > 1:17747337/1‑35 (MQ=255) tttCTCATCGCTGTTTCCCTGCCATTGACCTAAcc > 1:17529003/1‑35 (MQ=255) tttCTCATCGCTGTTTCCCTGCCATTGACCTAAcc > 1:1050983/1‑35 (MQ=255) ttCTCATCGCTGTTTCCCTGCCATTGACCTAACCg > 1:12650925/1‑35 (MQ=255) ttCTCATCGCTGTTTCCCTGCCATTGACCTAACCg < 1:20484878/35‑1 (MQ=255) ttCTCATCGCTGTTTCCCTGCCATTGACCTAACCg < 1:6904279/35‑1 (MQ=255) ctcATCGCTTTTTCCCTGCCATTGACCTAACCGTg < 1:10032828/35‑1 (MQ=255) ctcATCGCTGTTTCCCTGCCATTGACCTAACCGTg < 1:94548/35‑1 (MQ=255) ctcATCGCTGTTTCCCTGCCATTGACCTAACCGTg > 1:5569345/1‑35 (MQ=255) ctcATCGCTGTTTCCCTGCCATTGACCTAACCGTg > 1:714575/1‑35 (MQ=255) ctcATCGCTATTTCCCTGCCATTGACCTAACCGTg < 1:3927329/35‑1 (MQ=255) tcATCGCTGTTTCCCTGCCATTGACCTAACCGTgg > 1:2304854/1‑35 (MQ=255) naTCGCTGTTTCCCTGCCATTGACCTAACCGTGNc > 1:17238023/2‑35 (MQ=255) cATCGCTGTTTCCCTGCCATTGACCTAACCGTGGc > 1:20017518/1‑35 (MQ=255) aTCTCTGTTTCCCTGCCATTGACCTAACCGTGGCt > 1:13361330/1‑35 (MQ=255) aTCGCTGTTTCCCTGCCATTGACCTAACCGTGGCt > 1:4785370/1‑35 (MQ=255) tCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTc > 1:13763797/1‑35 (MQ=255) cGCTTTTCCCCTGCCATTGACCTAACCGTGGCTCg < 1:15207117/35‑1 (MQ=37) cGCTTTTCCCCTGCCATTGACCTAACCGTGGCTCg < 1:3292300/35‑1 (MQ=37) gCTTTTTCCCTGCCATTGACCTAACCGTGGCTCga < 1:18959222/35‑1 (MQ=255) gCTGTTTCCCTGCCATTGACCTAACCGTGGCTccc > 1:19498206/1‑33 (MQ=255) gCTGTTTCCCTGCCATTGACCTAACCGTGGCTCgc > 1:2413856/1‑34 (MQ=255) cctGTGTCCCTGCCATTttcaccaaatggcaaagc < 1:2549285‑M1/34‑19 (MQ=255) cTGTTCCCCTGCCATTGACCTAACCGTGGCTCgat < 1:15350788/35‑1 (MQ=255) tGTTTCCCTGCCATTttcaccaaatggcaaagccc < 1:5741663‑M1/35‑21 (MQ=255) tGTTTCCCTGCCATTGACCTAACCGTGGCTCgatg < 1:20211668/35‑1 (MQ=255) tGTGTCCCTGCCATTttcaccaaatggcaaagccc < 1:19954229‑M1/35‑21 (MQ=255) ttctcccTGCCATTttcaccaaatggcaaagccca < 1:20361927‑M1/32‑22 (MQ=255) gTTTCCCTGCCATTttcaccaaatggcaaagccca < 1:4836768‑M1/35‑22 (MQ=255) gTTTCCCTGCCATTGACCTAACCGTGGCTCgctga > 1:14585661/1‑35 (MQ=255) tttCCCTGCCATTGACCTAACCGTGGCTCcctgat > 1:11358380/1‑35 (MQ=37) ttccccTGCCATTGACCTAACCGTGGCTCgatgat < 1:11800090/32‑1 (MQ=255) ttCCCTGCCATTGACCTAACCGTGGCTCTATGAtt > 1:15916045/1‑35 (MQ=255) ttCCCTGCCATTGACCTAACCGTGGCTCGATGAtt > 1:9747408/1‑35 (MQ=255) ccccTGCCATTGACCTAACCGTGGCTCGATGAttt < 1:18776154/34‑1 (MQ=255) cccTGCCATTttcaccaaatggcaaagcccagcat < 1:17097199‑M1/35‑26 (MQ=255) cccTGCCATTttcaccaaatggcaaagcccagcat < 1:19921442‑M1/35‑26 (MQ=255) cccTGCCATTttcaccaaatggcaaagcccagcat < 1:14657683‑M1/35‑26 (MQ=255) cccTGCCATTGACCTAACCGTGGCTCGATGAtttt < 1:12426040/35‑1 (MQ=255) cccTGCCATTGACCTAACCGTGGCTCGATGAtttt > 1:3781356/1‑35 (MQ=255) ccTGCCATTttcaccaaatggcaaagcccagcata < 1:16076028‑M1/35‑27 (MQ=255) ccTGCCATTttcaccaaatggcaaagcccagcata < 1:7559619‑M1/35‑27 (MQ=255) ccTGCCATTttcaccaaatggcaaagcccagcata < 1:1309857‑M1/35‑27 (MQ=255) ccTGCCATTttaaccaaatggcaaagcccagcata < 1:4713196‑M1/35‑27 (MQ=255) cTGCCATTttcaccaaatggcaaagcccagcatat > 1:9362822‑M1/1‑8 (MQ=255) cTGCCATTttcaccaaatggcaaagcccagcatat < 1:1174732‑M1/35‑28 (MQ=255) cTGCCATTttcaccaaatggcaaagcccagcatat < 1:5298693‑M1/35‑28 (MQ=255) cTGCCATTttcaccaaatggcaaagcccagcatat < 1:9034457‑M1/35‑28 (MQ=255) cTGCCATTttcaccaaatggcaaagcccagcatat > 1:7365372‑M1/1‑8 (MQ=255) cTGCCATTttcaccaaatggcaaagcccagcatat < 1:8175434‑M1/35‑28 (MQ=255) cTGCCATTttcaccaaatggcaaagcccagcatat < 1:858670‑M1/35‑28 (MQ=255) cTGCCATTGACCTAACCGTGGCTCGATGATTTTGt > 1:17069193/1‑35 (MQ=255) cTGCCATTGACCTAACCGTGGCTCGATGATTTTGt > 1:14245421/1‑35 (MQ=255) cTGCCATTAACCTAACCGTGGCTCGATGAttttag > 1:8558531/1‑33 (MQ=38) tGCCATTGACCTAACCGTGGCTCGATGATTTTTTc > 1:1359577/1‑35 (MQ=255) tGCCATTGACCTAACCGTGGCTCGATGATTTTGTc < 1:4931453/35‑1 (MQ=255) tGCCATTGACCTAACCGTGGCTCGATGATTTTGTc < 1:6241992/35‑1 (MQ=255) gCCATTGACCTAACCGTGGCTCGATGATTTTGTCg < 1:20153036/35‑1 (MQ=255) gCCATTGACCTAACCGTGGCTCGATGATTTTGTCg < 1:3484901/35‑1 (MQ=255) ccATTttcaccaaatggcaaagcccagcatatcaa < 1:7065525‑M1/35‑31 (MQ=255) ccATTttcaccaaatggcaaagcccagcatatcaa < 1:4093239‑M1/35‑31 (MQ=255) ccATTttcaccaaatggcaaagcccagcatatcaa < 1:6532684‑M1/35‑31 (MQ=255) ccATTttcaccaaatggcaaagcccagcatatcaa > 1:6459844‑M1/1‑5 (MQ=255) ccATTGACCTAACCGTGGCTCGATGATTTTGTCgg < 1:15721050/35‑1 (MQ=255) ccATTGACCTAACCGTGGCTCGATGATTTTGTCgg < 1:15896023/35‑1 (MQ=255) ccATTGACCTAACCGTGGCTCGATGATTTTGTCgg < 1:2866437/35‑1 (MQ=255) cATTttcaccaaatggcaaagcccagcatatcaaa > 1:5321620‑M1/1‑4 (MQ=255) cATTttcaccaaatggcaaagcccagcatatcaaa > 1:16741303‑M1/1‑4 (MQ=255) cATTGACCTAACCGTGGCTCGATGATTTTGTCggg > 1:10963377/1‑34 (MQ=255) cATTGACCTAACCGTGGCTCGATGATTTTGTCggg > 1:5013250/1‑34 (MQ=255) cATTGACCTAACCGTGGCTCGATGATTTTGTCggg > 1:4491557/1‑34 (MQ=255) cATTGACCTAACCGTGGCTCGATGATTTTGTCGGt < 1:451263/35‑1 (MQ=255) aTTGACCTAACCGTGGCTCGATGATTTTGTCGGtt < 1:5229102/35‑1 (MQ=255) aTTGACCTAACCGTGGCTCGATGATTTTGTCGGtt < 1:10288525/35‑1 (MQ=255) ttttcaccaaatggcaaagcccagcatatcaaagg < 1:355730‑M1/35‑34 (MQ=255) ttGACCTAACCGTGGCTCGATGATTTTGTCGGTTa < 1:4180431/35‑1 (MQ=255) tttcaccaaatggcaaagcccagcatatcaaaggc < 1:3059685‑M1/35‑35 (MQ=255) tttcaccaaatggcaaagcccagcatatcaaaggc > 1:8230511‑M1/1‑1 (MQ=255) tttcaccaaatggcaaagcccagcatatcaaaggc > 1:1205558‑M1/1‑1 (MQ=255) tttcaccaaatggcaaagcccagcatatcaaaggc > 1:16356404‑M1/1‑1 (MQ=255) tGACCTAACCGTGGCTCGATGATTTTGTCGGTTAt < 1:18079803/35‑1 (MQ=255) tGACCTAACCGTGGCTCGATGATTTTGTCGGTTAt < 1:11051372/35‑1 (MQ=255) | TGTCTGCAGTTTCTCATCGCTGTTTCCCTGCCATTGACCTAACCGTGGCTCGATGATTTTGTCGGTTAT > REL606/1398185‑1398253 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |