New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 4798785 (0.830)13 (0.280) 4/22 NT 25.8% coding (605/942 nt) fixB predicted electron transfer flavoprotein, NAD/FAD‑binding domain and ETFP adenine nucleotide‑binding domain‑like
?REL606 1306336 = 36 (0.760)intergenic (‑97/+274) cls/kch cardiolipin synthetase/voltage‑gated potassium channel

Only 100 of 110 total aligned reads displayed.

AGCAACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/47941‑47987
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtcagcgtcggGGGCGGGGGTATAATGACCATTCTGTT  >  REL606/1306336‑1306362
                                                                          
agaAACAGCGTCGATCTCGACAAAGCCCGTCTGGT                                         <  1:6624167/32‑1
agaAACAGCGTCGATCTCGACAAAGCCCGTCTGGT                                         <  1:2660183/32‑1
AGCACCAGCGTCGATCTCGACAAAGCCCGTCTGGT                                         <  1:4259572/35‑1
AGCAACAGCGTCGATCTCGACAAAGCCCGTCTGGT                                         >  1:10116401/1‑35
 GCAACAGCGTCGATCTCGACAAAGCCCGTCTGGTG                                        >  1:16023051/1‑35
 GCAACAGCGTCGATCTCGACAAAGCCCGTCTGGTG                                        >  1:10549349/1‑35
  cacCAGCGTCGATCTCGACAAAGCCCGTCTGGTGG                                       <  1:7322731/32‑1
  cacCAGCGTCGATCTCGACAAAGCCCGTCTGGTGG                                       <  1:12898130/32‑1
  cacCAGCGTCGATCTCGACAAAGCCCGTCTGGTGG                                       <  1:565856/32‑1
  CAACAGCGTCGATCTCGACAAAGCCCGTCTGGTGG                                       <  1:14180110/35‑1
  CAACAGCGTCGATCTCGACAAAGCCCGTCTGGTGG                                       <  1:4010072/35‑1
  CAACAGCGTCGATCTCGACAAAGCCCGTCTGGGGG                                       >  1:4354345/1‑35
   acCAGCGTCGATCTCGACAAAGCCCGTCTGGTGGT                                      <  1:3507678/33‑1
   AACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGg                                      >  1:18427526/1‑34
   AACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGg                                      >  1:20213939/1‑34
   AACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGT                                      >  1:9215804/1‑35
   AACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGT                                      >  1:16261639/1‑35
   AACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGT                                      >  1:9803501/1‑35
    cCAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTC                                     <  1:19129636/34‑1
    ACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGgc                                     >  1:706341/1‑33
    ACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTC                                     <  1:7538256/35‑1
    ACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTC                                     >  1:2374052/1‑35
    ACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTC                                     <  1:7780312/35‑1
    ACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTC                                     >  1:12277666/1‑35
     CAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTCA                                    <  1:20030142/35‑1
     CAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTCA                                    <  1:8377352/35‑1
     CAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTCA                                    <  1:4780230/35‑1
     CAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTCA                                    <  1:12654664/35‑1
      AGCGTCGATCTCGACAAAGCCCGTCTGGTGGTCAG                                   <  1:11462439/35‑1
      AGCGTCGATCTCGACAAAGCCCGTCTGGTGGGCAG                                   >  1:19502227/1‑35
       GCGTCGATCTCGACAAGGCCCGTCTGGTGGTCAGC                                  <  1:9698919/35‑1
       GCGTCGATCTCGACAAAGCCCGTCTGGTGGTCAGC                                  <  1:12657462/35‑1
       GCGTCGATCTCGACAAAGCCCGTCTGGTGGTCAGC                                  <  1:11610279/35‑1
        CGTCGATCTCGACAAAGCCCGTCTGGTGGTCAGCG                                 <  1:15732812/35‑1
        CGTCGATCTCGACAAAGCCCGTCTGGTGGTCAGCG                                 <  1:9404476/35‑1
        CGTCGATCTCGACAAAGCCCGTCTGGTGGTCAGCG                                 <  1:1894728/35‑1
        CGTCGATCTCGACAAAGCCCGTCTGGTGGTCAGCG                                 >  1:16772823/1‑35
        CGTCGATCTCGACAAAGCCCGTCTGGTGGTAAGCG                                 >  1:6960177/1‑35
         GTCGATCTCGACAAAGCCCGTCTGGTGGTCAGCGT                                <  1:12421136/35‑1
         GTCGATCTCGACAAAGCCCGTCTGGTGGTCAGCGT                                <  1:4699187/35‑1
         GTCGATCTCGACAAAGCCCGTCTGGTGGTCAGCGT                                <  1:15723673/35‑1
         GTCGATCTCGACAAAGCCCGTCTGGTGGTCAGCGT                                >  1:7132279/1‑35
         GTCGATCTCGACAAAGCCCGTCTGGTGGGCAGCGT                                >  1:14241892/1‑35
         GTCGATCTCGACAAAGCCCGTCTGGTGGGCAGCGT                                >  1:641467/1‑35
          TCGATCTCGACAAAGCCTGTCTGGTGGTCAGCGTC                               >  1:10515333/1‑35
           ctATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCG                              <  1:3470178/33‑1
           CGATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCG                              <  1:9815129/35‑1
           CGATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCG                              <  1:14061402/35‑1
           CGATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCG                              <  1:15877686/35‑1
           CGATCTCGACAAAGCCCGTCTGGTGGTCAGCGCCG                              >  1:4472785/1‑35
            GATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGN                             >  1:19532917/1‑35
            GATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGG                             >  1:12679645/1‑35
            GATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGG                             >  1:13989636/1‑35
            GATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGG                             <  1:10108918/35‑1
            GATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGG                             <  1:14103302/35‑1
            GATCTCGACAAAGCCCGTCTGGTGGGCAGCGTCGG                             >  1:13912474/1‑35
            GATCTCGACAAAGCCCGTCTGGTGGGCAGCGTCGG                             >  1:30127/1‑35
             ATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGGG                            >  1:14936413/1‑35
             ATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGGG                            >  1:2843446/1‑35
              TCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGGGG                           >  1:6999852/1‑35
              TCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGGGG                           >  1:9256156/1‑35
               CTCGACAAAGCCCGTCTGGTGGTCAGCGTCGGGGG                          >  1:19061176/1‑35
               CTCGACAAAGCCCGTCTGGTGGTCAGCGTCGGGGG                          >  1:14730704/1‑35
                TCGACAAAGCCCGTCTGGTGGTCAGCGTCGGGGGg                         >  1:4613301/1‑34
                 CGACAAAGCCCGTCTGGTGGTCAGCGTCGGGGGgg                        >  1:17496806/1‑33
                  GACAAAGCCCGTCTGGTGGTCAGCGTCGGGGGGGG                       >  1:6632844/1‑35
                  GACAAAGCCCGTCTGGTGGTCAGCGTCGGGGGGGG                       >  1:15948857/1‑35
                  GACAAAGCCCGTCTGGTGGTCAGCGTCGGGGGGGG                       >  1:2563311/1‑35
                  GACAAAGCCCGTCTGGTGGTCAGCGTCGGGGGGGG                       >  1:8117450/1‑35
                  GACAAAGCCCGTCTGGTGGTCAGCGTCGGGGGGGG                       >  1:1488361/1‑35
                   ACAAAGCCCGTCTGGTGGTCAGCGTCGGGGGGGGG                      >  1:17527757/1‑35
                   ACAAAGCCCGTCTGGTGGTCAGCGTCGGGGGGGGG                      >  1:18523169/1‑35
                    CAAAGCCCGTCTGGTGGTCAGCGTCGGGGGGGGGG                     >  1:12668824/1‑35
                    CAAAGCCCGTCTGGTGGTCAGCGTCGGGGGGGGGG                     >  1:8228495/1‑35
                    CAAAGCCCGTCTGGTGGTCAGCGTCGGGGGGGGGG                     >  1:13524686/1‑35
                     AAAGCCCGTCTGGTGGTCAGCGTCGGGGGGGGGGG                    >  1:7672487/1‑35
                     AAAGCCCGTCTGGTGGTCAGCGTCGGGGGGGGGGG                    >  1:10577838/1‑35
                      AAGCCCGTCTGGTGGTCAGCGTCGGGGGGGGGGGg                   >  1:3084660/1‑34
                                  TGGTCAGCGTCGGGGGCGGGGGGATAATGACCATT       >  1:7170728/1‑35
                                   GGTCAGCGTCGGGGGCGGGGGGATAATGACCATTC      >  1:12665690/1‑35
                                    GTCAGCGTCGGGGGCGGGGGTATAATGACCATTCT     <  1:15178661/35‑1
                                    GTCAGCGTCGGGGGCGGGGGGATAATGACCATTCT     >  1:5443308/1‑35
                                     TCAGCGTCGGGGGCGGGGGTATAATGACCATTCTN    <  1:5725624/35‑1
                                     TCAGCGTCGGGGGCGGGGGTATAATGACCATTCTG    <  1:10005403/35‑1
                                     TCAGCGTCGGGGGCGGGGGTATAATGACCATTCTG    <  1:4821310/35‑1
                                     TCAGCGTCGGGGGCGGGGGTATAATGACCATTCTG    <  1:15522134/35‑1
                                     TCAGCGTCGGGGGCGGGGGTATAATGACCATTCTG    <  1:1693449/35‑1
                                     TCAGCGTCGGGGGCGGGGGTATAATGACCATTCTG    <  1:2187439/35‑1
                                     TCAGCGTCGGGGGCGGGGGTATAATGACCATTCTG    <  1:20091149/35‑1
                                      gAGCGTCGGGGGCGGGGGTATAATGACCATTCTGT   <  1:14477564/34‑1
                                      CAGCGTCGGGGGCGGGGGTATAATGACCATTCTGT   <  1:5160711/35‑1
                                      CAGCGTCGGGGGCGGGGGTATAATGACCATTCTGT   <  1:12162138/35‑1
                                      CAGCGTCGGGGGCGGGGGTATAATGACCATTCTGT   <  1:913285/35‑1
                                      CAGCGTCGGGGGCGGGGGTATAATGACCATTCTGT   <  1:10446587/35‑1
                                       AGCGTCGGGGGCGGGGGTATAATGACCATTCTGTT  <  1:5418442/35‑1
                                       AGCGTCGGGGGCGGGGGTATAATGACCATTCTGTT  <  1:12668027/35‑1
                                       AGCGTCGGGGGCGGGGGTATAATGACCATTCTGTT  <  1:780094/35‑1
                                       AGCGTCGGGGGCGGGGGTATAATGACCATTCTGTT  <  1:20426773/35‑1
                                       AGCGTCGGGGGCGGGGGTATAATGACCATTCTGTT  <  1:2016379/35‑1
                                       AGCGTCGGGGGCGGGGGGATAATGACCATTCTGTT  >  1:10689183/1‑35
                                                                          
AGCAACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/47941‑47987
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtcagcgtcggGGGCGGGGGTATAATGACCATTCTGTT  >  REL606/1306336‑1306362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.