New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 473904 | 87 (0.850) | 42 (0.540) | 6/36 | NT | 41.1% | coding (1402/1677 nt) | ybaL | predicted transporter with NAD(P)‑binding Rossmann‑fold domain |
? | REL606 | = 1923465 | 55 (0.710) | coding (662/1011 nt) | ruvB | Holliday junction DNA helicase B |
Only 100 of 120 total aligned reads displayed.
ATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/473865‑473904 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgcGCATTGCCAACCGTCTGCTGCGTCGAGTGCGTGA < REL606/1923465‑1923432 ATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTC < 1:10725787/35‑1 TTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCG > 1:14560489/1‑35 TTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCG < 1:9563134/35‑1 TTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCG > 1:2760294/1‑35 TTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCG < 1:7475335/35‑1 TTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCG > 1:2224292/1‑35 TCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGC < 1:15132258/35‑1 TCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGC > 1:3246228/1‑35 TCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGC < 1:4165990/35‑1 TCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGC < 1:6260556/35‑1 TCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGC > 1:16964333/1‑35 TCCAGATGCGCCAGTTGCACAATTTCTTCGTTCGC > 1:9470773/1‑35 CCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCC > 1:13865851/1‑35 CCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCC > 1:5626243/1‑35 CCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCC < 1:10746977/35‑1 CCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCC > 1:2282689/1‑35 CCAGATGCGCCAGTTGCATAATTTCTTCGTTAGCC < 1:7530476/35‑1 CAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCG > 1:17218303/1‑35 CAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCG < 1:5555546/35‑1 CAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCG > 1:12862137/1‑35 CAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCG > 1:2265118/1‑35 CAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCG > 1:3029273/1‑35 AGATGCGCCAGTTTCATAATTTCTTCGTTCGCCGC > 1:8126251/1‑35 AGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGC < 1:5633147/35‑1 AGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGC > 1:5515791/1‑35 AGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGC > 1:6460954/1‑35 GATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCG < 1:14577769/35‑1 GATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCG < 1:19566846/35‑1 ATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCGC > 1:10245524/1‑35 ATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCGC > 1:20561706/1‑35 ATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCGC > 1:11376272/1‑35 ATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCGC > 1:4184225/1‑35 ATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCGC > 1:19197769/1‑35 ATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCGC > 1:12673375/1‑35 ATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCGC > 1:16704037/1‑35 ATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCGC > 1:622514/1‑35 ATGCGCCAGTTGCATAATTTCTTCGTTCGCCGCGC > 1:1259472/1‑35 TGCGCCAGTTGCATAATTTCTTCGTTCGCCGCGCA < 1:4722033/35‑1 TGCGCCAGTTGCATAATTTCTTCGTTCGCCGCGCA > 1:11717038/1‑35 TGCGCCAGTTGCATAATTTCTTCGTTCGCCGCGCA < 1:12109623/35‑1 GCGCCAGTTGCATAATTTCTTCGTTCGCCGCGCAT < 1:2536497/35‑1 GCGCCAGTTGCATAATTTCTTCGTTCGCCGCGCAT < 1:13948649/35‑1 GCGCCAGTTGCATAATTTCTTCGTTCGCCGCGCAT > 1:16187358/1‑35 CGCCAGTTGCATAATTTCTTCGTTCGCCGCGCATT < 1:10150244/35‑1 CGCCAGTTGCATAATTTCTTCGTTCGCCGCGCATT > 1:1680785/1‑35 CGCCAGTTGCATAATTTCTTCGTTCGCCGCGCATT > 1:9514753/1‑35 CGCCAGTTGCATAATTTCTTCGTTCGCCGCGCATT > 1:11295395/1‑35 CGCCAGTTGCATAATTTCTTCGTTCGCCGCGCATT < 1:5085454/35‑1 GCCAGTTGCATAATTTCTTCGTTCGCCGCGCATTG > 1:11049635/1‑35 GCCAGTTGCATAATTTCTTCGTTCGCCGCGCATTG < 1:13887884/35‑1 GCCAGTTGCATAATTTCTTCGTTCGCCGCGCATTG < 1:3909573/35‑1 GCCAGTTGCATAATTTCTTCGTTCGCCGCGCATTG < 1:7799118/35‑1 GCCAGTTGCATAATTTCTTCGTTCGCCGCGCATTG > 1:16045058/1‑35 GCCAGTTGCATAATTTCTTCGTTCGCCGCGCATTG > 1:16110542/1‑35 GCCAGTTGCATAATTTCTTCGTTCGCCGCGCATTG > 1:18204737/1‑35 GCCAGTTGCATAATTTCTTCGTTCGCCGCGCATTG > 1:12601666/1‑35 CCAGTTTCATAATTTCTTCGTTCGCCGCGCATTGC > 1:18923369/1‑35 CCAGTTGCATAATTTCTTCGTTCGCCGCGCATTGC > 1:11666950/1‑35 CCAGTTGCATAATTTCTTCGTTCGCCGCGCATTGC < 1:6301406/35‑1 CCAGTTGCATAATTTCTTCGTTCGCCGCGCATTGC > 1:11870647/1‑35 CAGTTGCATAATTTCTTCGTTCGCCGCGCATTGCC < 1:7805302/35‑1 CAGTTGCATAATTTCTTCGTTCGCCGCGCATTGCC < 1:948228/35‑1 CAGTTGCATAATTTCTTCGTTCGCCGCGCATTGCC > 1:6170677/1‑35 CAGTTGCATAATTTCTTCGTTCGCCGCGCATTGCC < 1:13012124/35‑1 CAGTTGCATAATTTCTTCGTTCGCCGCGCATTGCC > 1:16739866/1‑35 CAGTTGCATAATTTCTTCGTTCGCCGCGCATTGCC > 1:20040315/1‑35 AGTTGCATAATTTCTTCGTTCGCCGCGCATTGCCc > 1:1024742/1‑34 AGTTGCATAATTTCTTCGTTCGCCGCGCATTGCCc < 1:3328955/35‑2 AGTTGCATAATTTCTTCGTTCGCCGCGCATTGCCc > 1:11044705/1‑34 AGTTGCATAATTTCTTCGTTCGCCGCGCATTGCCc > 1:6800492/1‑34 AGTTGCATAATTTCTTCGTTCGCCGCGCATTGCCc > 1:20097143/1‑34 AGTTGCATAATTTCTTCGTTCGCCGCGCATTGCCc < 1:16771071/35‑2 AGTTGCATAATTTCTTCGTTCGCCGCGCATTGCCc < 1:17589770/35‑2 GTTGCATAATTTCTTCGTTCGCCGCGCATTGCCca > 1:3564444/1‑33 GTTGCATAATTTCTTCGTTCGCCGCGCATTGCCca > 1:5328282/1‑33 TTGCATAATTTCTTCGTTCGCCGCGCATTGCCcaa > 1:15335595/1‑32 TTGCATAATTTCTTCGTTCGCCGCGCATTGCCcaa > 1:611723/1‑32 TTGCATAATTTCTTCGTTCGCCGCGCATTGCCcaa > 1:5813837/1‑32 TTGCATAATTTCTTCGTTCGCCGCGCATTGCCcaa < 1:2160190/35‑4 ccCCGCGCATTGCCAACCGTCTGCTGCGTCGAGTG < 1:13554013/33‑1 CGCCGCGCATTGCCAACCGTCTGCTGCGTCGAGTG > 1:10176853/1‑35 CGCCGCGCATTGCCAACCGTCTGCTGCGTCGAGTG > 1:19216754/1‑35 CGCCGCGCATTGCCAACCGTCTGCTGCGTCGAGTG < 1:10240782/35‑1 CGCCGCGCATTGCCAACCGTCTGCTGCGTCGAGTG < 1:15828005/35‑1 CGCCGCGCATTGCCAACCGTCTGCTGCGTCGAGTG > 1:2036906/1‑35 GCCGCGCATTGCCACCCGTCTGCTGCGTCGAGTGC < 1:4551085/35‑1 GCCGCGCATTGCCAACCGTCTGCTGCGTCGAGTGC > 1:17656133/1‑35 GCCGCGCATTGCCAACCGTCTGCTGCGTCGAGTGC < 1:16615536/35‑1 GCCGCGCATTGCCAACCGTCTGCTGCGTCGAGTGC > 1:16535902/1‑35 GCCGCGCATTGCCAACCGTCTGCTGCGTCGAGTGC > 1:1353857/1‑35 CCGCGCATTGCCAACCGTCTGCTGCGTCGAGTGCG < 1:16092172/35‑1 CCGCGCATTGCCAACCGTCTGCTGCGTCGAGTGCG > 1:6861025/1‑35 CGCGCATTGCCAACCGTCTGCTGCGTCGAGTGCtt > 1:5153063/1‑33 CGCGCATTGCCAACCGTCTGCTGCGTCGAGTGCGT < 1:4098565/35‑1 CGCGCATTGCCAACCGTCTGCTGCGTCGAGTGCGT < 1:20179673/35‑1 cCGCATTGCCAACCGTCTGCTGCGTCGAGTGCGTG < 1:20099734/34‑1 GCGCATTGCCAACCGTCTGCTGCGTCGAGTGCGTG < 1:7840987/35‑1 GCGCATTGCCAACCGTCTGCTGCGTCGAGTGCGTG > 1:7716244/1‑35 GCGCATTGCCAACCGTCTGCTGCGTCGAGTGCGTG > 1:9647125/1‑35 CGCATTGCCAACCGTCTGCTGCGTCGAGTGCGTGA > 1:17668040/1‑35 ATTCCAGATGCGCCAGTTGCATAATTTCTTCGTTCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/473865‑473904 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgcGCATTGCCAACCGTCTGCTGCGTCGAGTGCGTGA < REL606/1923465‑1923432 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |