Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 4,613,019 | +TT :: IS150 (+) | 100% | intergenic (‑16/‑91) | smp ← / → serB | hypothetical protein/3‑phosphoserine phosphatase |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 664686 = | NA (NA) | 139 (1.350) | 45/48 | NT | 100% | intergenic (‑77/‑49) | gltL/insJ‑2 | ATP‑binding protein of glutamate/aspartate transport system; b0652_1/IS150 hypothetical protein |
? | REL606 | = 4613019 | 0 (0.000) | intergenic (‑16/‑90) | smp/serB | hypothetical protein/3‑phosphoserine phosphatase | |||||
* | ? | REL606 | = 3894996 | NA (NA) | 114 (1.160) | 38/46 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | 4613020 = | 0 (0.000) | intergenic (‑17/‑89) | smp/serB | hypothetical protein/3‑phosphoserine phosphatase |
Only 100 of 147 total aligned reads displayed.
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3894963‑3894996 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aATTTGAGACTTAATGTTGCCAGAAGCAATGGATA > REL606/4613020‑4613053 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTAAAA < 1:10295877/35‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACAATTTG > 1:15514990/1‑35 TTAACTGTCCAACTTTTTGGGGTCAGTACAATTTG > 1:2410352/1‑35 TTAACTGTCCAACTTTTTGGGGTCAGTACAATTTG > 1:15730490/1‑35 TTAACTGTCCAACTTTTTGGGGTCAGTACAATTTG < 1:19500010/35‑1 TAACTGTCCAACTTTTTGGGGTCAGTACAATTTGA > 1:20123980/1‑35 TAACTGTCCAACTTTTTGGGGTCAGTACAATTTGA < 1:2624284/35‑1 TAACTGTCCAACTTTTTGGGGTCAGTACAATTTGA > 1:3195388/1‑35 TAACTGTCCAACTTTTTGGGGTCAGTACAATTTGA > 1:3658162/1‑35 aaaTGTCCAACTTTTTGGGGTCAGTACAATTTGAG < 1:11808744/32‑1 AACTGTCCAACTTTTTGGGGTCAGTACAATTTGAG > 1:5918453/1‑35 AACTGTCCAACTTTTTGGGGTCAGTACAATTTGAG > 1:17714342/1‑35 ACTGTCCAACTTTTTGGGGTCAGTACAATTTGAGA < 1:18793174/35‑1 ACTGTCCAACTTTTTGGGGTCAGTACAATTTGAGA > 1:15047015/1‑35 ACTGTCCAACTTTTTGGGGTCAGTACAATTTGAGA < 1:16844395/35‑1 CTGTCCAACTTTTTGGGGTCAGTACAATTTGAGAC > 1:19453777/1‑35 TGTCCAACTTTTTGGGGTCAGTACAATTTGAGACT < 1:19183500/35‑1 TGTCCAACTTTTTGGGGTCAGTACAATTTGAGACT > 1:18914345/1‑35 TGTCCAACTTTTTGGGGTCAGTACAATTTGAGACT < 1:9472780/35‑1 TGTCCAACTTTTTGGGGTCAGTACAATTTGAGACT < 1:20442251/35‑1 TGTCCAACTTTTTGGGGTCAGTACAATTTGAGACT > 1:8397605/1‑35 GTCCAACTTTTTTGGGTCAGTACAATTTGAGACTT > 1:878966/1‑35 TCCAACTTTTTGGGGTCAGTACAATTTGAGACTTA > 1:16619529/1‑35 CCAACTTTTTGGGGTCAGTACAATTTGAGACTTAA > 1:12307924/1‑35 CCAACTTTTTGGGGTCAGTACAATTTGAGACTTAA > 1:3393738/1‑35 CCAACTTTTTGGGGTCAGTACAATTTGAGACTTAA > 1:2612387/1‑35 CCAACTTTTTGGGGTCAGTACAATTTGAGACTTAA < 1:1404276/35‑1 CCAACTTTTTGGGGTCAGTACAATTTGAGACTTAA > 1:6403461/1‑35 CAACTTTTTGGGGTCAGTACAATTTGAGACTTAAT < 1:14706938/35‑1 CAACTTTTTGGGGTCAGTACAATTTGAGACTTAAT < 1:3018392/35‑1 CAACTTTTTGGGGTCAGTACAATTTGAGACTTAAT < 1:8264975/35‑1 CAACTTTTTGGGGTCAGTACAATTTGAGACTTAAT < 1:10425938/35‑1 AACTTTTTGGGGTCAGTACAATTTGAGACTTAATG > 1:13420126/1‑35 AACTTTTTGGGGTCAGTACAATTTGAGACTTAATG < 1:11857102/35‑1 AACTTTTTGGGGTCAGTACAATTTGAGACTTAATG > 1:451701/1‑35 AACTTTTTGGGGTCAGTACAATTTGAGACTTAATG < 1:5694321/35‑1 ACTTTTTTGGGTCAGTACAATTTGAGACTTAATGT > 1:13565287/1‑35 ACTTTTTGGGGTCAGTACAATTTGAGACTTAATGT < 1:15270727/35‑1 ACTTTTTGGGGTCAGTACAATTTGAGACTTAATGT > 1:18050298/1‑35 CTTTTTGGGGTCAGTACAATTTGAGACTTAATGTT < 1:2520080/35‑1 TTTTTGGGGTCAGTACAATTTGAGACTTAATGTTG < 1:19462152/35‑1 TTTTTGGGGTCAGTACAATTTGAGACTTAATGTTG > 1:11473915/1‑35 TTTTTGGGGTCAGTACAATTTGAGACTTAATGTTG < 1:19264435/35‑1 TTTTGGGGTCAGTACAATTTGAGACTTAATGTTGC > 1:18733452/1‑35 TTTTGGGGTCAGTACAATTTGAGACTTAATGTTGC > 1:4814339/1‑35 TTTTGGGGTCAGTACAATTTGAGACTTAATGTTGC > 1:19355150/1‑35 TTTTGGGGTCAGTACAATTTGAGACTTAATGTTGC < 1:18590798/35‑1 TTTTGGGGTCAGTACAATTTGAGACTTAATGTTGC > 1:12442020/1‑35 TTGGGGTCAGTACAATTTGAGACTTAATGTTGCCA > 1:12137539/1‑35 TTGGGGTCAGTACAATTTGAGACTTAATGTTGCCA > 1:12209106/1‑35 TGGGGTCAGTACAATTTTAGACTTAATGTTGCCAG > 1:15914631/1‑35 TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG > 1:18154547/1‑35 TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG < 1:8381496/35‑1 TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG > 1:737344/1‑35 TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG < 1:4687073/35‑1 TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG < 1:18336024/35‑1 TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG < 1:20294467/35‑1 TGGGGTCAGTACAATTTGAGACTTAATGTTGCCAG > 1:20490649/1‑35 GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA < 1:18323099/35‑1 GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA > 1:12466399/1‑35 GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA > 1:6930410/1‑35 GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA < 1:13293452/35‑1 GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA > 1:1463927/1‑35 GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA > 1:4767571/1‑35 GGGGTCAGTACAATTTGAGACTTAATGTTGCCAGA > 1:9546254/1‑35 GGGTCAGTACAATTTGAGACTTAATGTTGCCAGAA > 1:6229623/1‑35 GGGTCAGTACAATTTGAGACTTAATGTTGCCAGAA > 1:11275088/1‑35 GGGTCAGTACAATTTGAGACTTAATGTTGCCAGAA > 1:17673389/1‑35 GGTCAGTACAATTTGAGACTTAATTTTGCCAGAAG > 1:11388496/1‑35 GGTCAGTACAATTTGAGACTTAATGTTGCCAGAAG < 1:5552382/35‑1 GGTCAGTACAATTTGAGACTTAATGTTGCCAGAAG < 1:15239159/35‑1 nTCAGTACAATTTGAGACTTAATGTTGCCAGAAGC > 1:20113342/2‑35 GTCAGTACAATTTGAGACTTAATGTTGCCAGAAGC < 1:7243409/35‑1 GTCAGTACAATTTGAGACTTAATGTTGCCAGAAGC > 1:11355578/1‑35 GTCAGTACAATTTGAGACTTAATGTTGCCAGAAGC > 1:8229788/1‑35 GTCAGTACAATTTGAGACTTAATGTTGCCAGAAGC < 1:9202841/35‑1 TCAGTACAATTTGAGACTTAGTGTTGCCAGAAGCA < 1:19754345/35‑1 TCAGTACAATTTGAGACTTAATGTTGCCAGAAGCA < 1:17304971/35‑1 CAGTACAATTTGAGACTTAATGTTGCCATAAGCAA > 1:7314219/1‑35 CAGTACAATTTGAGACTTAATGTTGCCAGAATCAA > 1:10272897/1‑35 CAGTACAATTTGAGACTTAATGTTGCCAGAAGCAA > 1:10891733/1‑35 CAGTACAATTTGAGACTTAATGTTGCCAGAAGCAA > 1:4738853/1‑35 CAGTACAATTTGAGACTTAATGTTGCCAGAAGCAA > 1:13287058/1‑35 CAGTACAATTTGAGACTTAATGTTGCCAGAAGCAA > 1:20309032/1‑35 CAGTACAATTTGAGACTTAATGTTGCCAGAAGCAA < 1:18028091/35‑1 CAGTACAATTTGAGAATTAATGTTGCCAGAAGCAA > 1:5382088/1‑35 AGTACAATTTGAGACTTAATGTTGCCAGAAGCAAT > 1:6079688/1‑35 AGTACAATTTGAGACTTAATGTTGCCAGAAGCAAT > 1:11480336/1‑35 AGTACAATTTGAGACTTAATGTTGCCAGAAGCAAT < 1:14256386/35‑1 AGTACAATTTGAGACTTAATGTTGCCAGAAGCAAT < 1:16256533/35‑1 ACAATTTGAGACTTAATGTTGCCAGAAGCAATGGA > 1:8691997/1‑35 ACAATTTGAGACTTAATGTTGCCAGAAGCAATGGA > 1:96387/1‑35 ACAATTTGAGACTTAATGTTGCCAGAAGCAATGGA > 1:10409626/1‑35 ACAATTTGAGACTTAATGTTGCAAGAAGCAATGGA < 1:3954488/35‑1 CAATTTGAGACTTAATGTTGCCAGAAGCAATGGAT > 1:6007948/1‑35 CAATTTGAGACTTAATGTTGCCAGAAGCAATGGAT < 1:19178841/35‑1 CAATTTGAGACTTAATGTTGCCAGAAGCAATGGAT > 1:17824440/1‑35 AATTTGAGACTTAATGTTGCCAGAAGCAATGGATA > 1:19762021/1‑35 AATTTGAGACTTAATGTTGCCAGAAGCAATGGATA > 1:17221339/1‑35 AATTTGAGACTTAATGTTGCCAGAAGCAATGGATA < 1:10149541/35‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3894963‑3894996 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aATTTGAGACTTAATGTTGCCAGAAGCAATGGATA > REL606/4613020‑4613053 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |