New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 679401 | 75 (0.730) | 6 (0.070) | 3/38 | NT | 13.9% | intergenic (‑174/+207) | metT/asnB | tRNA‑Met/asparagine synthetase B |
? | REL606 | 4198479 = | 15 (0.180) | coding (341/1737 nt) | aceK | bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
ATTCGTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/679363‑679401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAG > REL606/4198479‑4198512 ATTCGTCAATTATTGTTTACTTTGTGTTTTTTCCC > 1:2505816/1‑35 ATTCGTCAATTATTGTTTACTTTGTGTTTTTTCCC < 1:85155/35‑1 ATTCGTCAATTATTGTTTACTTTGTGTTTTTTCCC < 1:19697480/35‑1 ATTCGTCAATTATTGTTTACTTTGTGTTTTTTCCC < 1:14969001/35‑1 ATTCGTCAATTATTGTTTACTTTGTGTTTTTTCCC > 1:18108724/1‑35 ATTCGTCAATTATTGTTTACTTTGTGTTTTTTCCC > 1:19378944/1‑35 TTCGTCAATTATTGTTTACTTTGTGTTTTTTCCCC > 1:3347999/1‑35 TTCGTCAATTATTGTTTACTTTGTGTTTTTTCCCC > 1:7334048/1‑35 TTCGTCAATTATTGTTTACTTTGTGTTTTTTCCCC < 1:7921137/35‑1 TCGTCAATTATTGTTTACTTTGTGTTTTTTCCCCA > 1:16363094/1‑35 TCGTCAATTATTGTTTACTTTGTGTTTTTTCCCCA > 1:15614379/1‑35 TCGTCAATTATTGTTTACTTTGTGTTTTTTCCCCA < 1:17098062/35‑1 TCGTCAATTATTGTTTACTTTGTGTTTTTTCCCCA > 1:13479136/1‑35 TCGTCAATTATTGTTTACTTTGTGTTTTTTCCCCA > 1:19398124/1‑35 TCGTCAATTATTGTTTACTTTGTGTTTTTTCCCCA < 1:4415368/35‑1 CGTCAATTATTGTTTACTTTGTGTTTTTTCCCCAC > 1:17109727/1‑35 CGTCAATTATTGTTTACTTTGTGTTTTTTCCCCAC > 1:4938115/1‑35 CGTCAATTATTGTTTACTTTGTGTTTTTTCCCCAC > 1:20536923/1‑35 CGTCAATTATTGTTTACTTTGTGTTTTTTCCCCAC < 1:2884302/35‑1 CGTCAATTATTGTTTACTTTGTGTTTTTTCCCCAC < 1:6226664/35‑1 CGTCAATTATTGTTTACTTTGTGTTTTTTCCCCAC > 1:7966938/1‑35 CGTCAATTATTGTTTACTTTGTGTTTTTTCCCCAC > 1:14660807/1‑35 CGTCAATTATTGTTTACTTTGTGTTTTTTCCCCAC > 1:12873102/1‑35 CGTCAATTATTGTTTACTTTGTGTTTTTTCCCCAC < 1:10670301/35‑1 CGTCAATTATTGTTTACTTTGTGTTTTTTCCCCAC > 1:9428058/1‑35 GTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:4518497/35‑1 GTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:11666233/35‑1 GTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:740831/35‑1 GTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:1881850/35‑1 GTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC > 1:18400291/1‑35 GTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC > 1:14266545/1‑35 GTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:2887047/35‑1 GTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC > 1:3376382/1‑35 GTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:17507184/35‑1 GTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC < 1:3243561/35‑1 gtTTTTTTCCCCACCGCTCGCTTACTCCCGAGCGG < 1:17571849/33‑1 gtTTTTTTCCCCACCGCTCGCTTACTCCCGAGCGG < 1:16845609/33‑1 TGTTTTTTCCCCACCGCTCGCTTACTCCCGAGCGG < 1:7807670/35‑1 TTTTTTCCCCACCGCTCGCTTACTCCCGAGCGGCT < 1:2158653/35‑1 TTTTTCCCCCACCGCTCGCTTACTCCCGAGCGGCT < 1:12673570/35‑1 aTTTCCCCACCGCTCGCTTACTCCCGAGCGGCTTT < 1:15143312/34‑1 TTTGCCCCACCGCTCGCTTACTCCCGAGCGGCTTT < 1:5190486/35‑1 ttgCCCACCGCTCGCTTACTCCCGAGCGGCTTTTT < 1:17702553/32‑1 TTCCCCACCGCTCGCTTACTCCCGAGCGGCTTTTT < 1:18925921/35‑1 ccgCCACCGCTCGCTTACTCCCGAGCGGCTTTTTA < 1:9636249/32‑1 cCCCCCCCGCTCGCTTACTCCCGAGCGGCTTTTTA < 1:8800274/34‑1 CCCCACCGCTCGCTTACTCCCGAGCGGCTTTTTAT < 1:10364888/35‑1 CCCCACCGCTCGCTTACTCCCGAGCGGCTTTTTAT < 1:16239460/35‑1 CCCCACCGCTCGCTTACTCCCGAGCGGCTTTTTAT < 1:9023181/35‑1 CCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCT < 1:20298390/35‑1 CCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCT < 1:12855173/35‑1 CACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTT < 1:10280083/35‑1 CACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTT < 1:8400006/35‑1 cCCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTT < 1:1148128/34‑1 ACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTT < 1:15247101/35‑1 ACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTT < 1:6249834/35‑1 ACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTT < 1:17905042/35‑1 ACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTT < 1:4841092/35‑1 ACCGCTAGCTTACTCCCGAGCGGCTTTTTATCTTT < 1:5207247/35‑1 CCGCTCGCTTACTCCCGAGCGGCTTTTTTTCTTTA > 1:6511164/1‑35 CCGCTCGCTTACTCCCGAGCGGCTTTTTTTCTTTA > 1:13281299/1‑35 CCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTA > 1:9581365/1‑35 CCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTA < 1:13752492/35‑1 CCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTA < 1:2505439/35‑1 CGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAG < 1:12454119/35‑1 CGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAG < 1:2060379/35‑1 CGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAG < 1:3159706/35‑1 ATTCGTCAATTATTGTTTACTTTGTGTTTTTTCCCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/679363‑679401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAG > REL606/4198479‑4198512 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |