New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2183026 = | 73 (0.710) | 12 (0.160) | 5/34 | NT | 15.2% | intergenic (+74/‑56) | yohK/cdd | predicted inner membrane protein/cytidine deaminase |
? | REL606 | = 3512380 | 82 (1.130) | intergenic (‑122/‑211) | yhhX/yhhY | predicted oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/predicted acetyltransferase |
TCATGTAATGGGATAACAGTTTACGAACCCGTTGTGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2183066‑2183026 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctttTTTTTTGATCTTTCGTTCTCAATTTATCCACGGG < REL606/3512380‑3512347 TCATGTAATGGGATAACAGTTTACGAACCCGTTGT > 1:9297862/1‑35 TCATGTAATGGGATAACAGTTTACGAACCCGTTGT < 1:17318191/35‑1 TCATGTAATGGGATAACAGTTTACGAACCCGTTGT < 1:18351506/35‑1 TCATGTAATGGGATAACAGTTTACGAACCCGTTGT > 1:6567333/1‑35 CATGTAATGGGATAACAGTTTACGAACCCGTTGTG > 1:16896148/1‑35 CATGTAATGGGATAACAGTTTACGAACCCGTTGTG > 1:19004479/1‑35 CATGTAATGGGATAACAGTTTACGAACCCGTTGTG < 1:375017/35‑1 CATGTAATGGGATAACAGTTTACGAACCCGTTGTG < 1:5589483/35‑1 CATGTAATGGGATAACAGTTTACGAACCCGTTGTG > 1:13177746/1‑35 CATGTAATGGGATAACAGTTTACGAACCCGTTGTG < 1:7741339/35‑1 CATGTAATGGGATAACAGTTTACGAACCCGTTGTG > 1:7812673/1‑35 CATGTAATGGGATAACAGTTTACGAACCCGTTGTG < 1:8503428/35‑1 ATGTAATGGGATAACAGTTTACGAACCCGTTGTGt > 1:6464718/1‑34 ATGTAATGGGATAACAGTTTACGAACCCGTTGTGG > 1:8140483/1‑35 ATGTAATGGGATAACAGTTTACGAACCCGTTGTGG > 1:14109780/1‑35 ATGTAATGGGATAACAGTTTACGAACCCGTTGTGG > 1:19857814/1‑35 ATGTAATGGGATAACAGTTTACGAACCCGTTGTGG > 1:8213042/1‑35 ATGTAATGGGATAACAGTTTACGAACCCGTTGTGG < 1:15159542/35‑1 ATGTAATGGGATAACAGTTTACGAACCCGTTGTGG < 1:1163332/35‑1 ATGTAATGGGATAACAGTTTACGAACCCGTTGTGG < 1:9859306/35‑1 ATGTAATGGGACAACAGTTTACGAACCCGTTGTGG > 1:183747/1‑35 TGTAATGGGATAACAGTTTACGAACCCGTTGTGGC < 1:5796163/35‑1 TGTAATGGGATAACAGTTTACGAACCCGTTGTGGC > 1:20270393/1‑35 TGTAATGGGATAACAGTTTACGAACCCGTTGTGGC > 1:1929853/1‑35 TGTAATGGGATAACAGTTTACGAACCCGTTGTGGC > 1:19036540/1‑35 TGTAATGGGATAACAGTTTACGAACCCGTTGTGGC > 1:15774711/1‑35 GTAATGGGATAACAGTTTACGAACCCGTTGTGGCT < 1:10771781/35‑1 GTAATGGGATAACAGTTTACGAACCCGTTGTGGCT > 1:93125/1‑35 GTAATGGGATAACAGTTTACGAACCCGTTGTGGCT < 1:7112413/35‑1 GTAATGGGATAACAGTTTACGAACCCGTTGTGGCT > 1:3624089/1‑35 GTAATGGGATAACAGTTTACGAACCCGTTGTGGCT < 1:3386705/35‑1 GTAATGGGATAACAGTTTACGAACCCGTTGTGGCT < 1:17858364/35‑1 TAATGGGATAACAGTTTACGAACCCGTTGTTGCTT > 1:15579003/1‑35 TAATGGGATAACAGTTTACGAACCCGTTGTGGCTT < 1:16928712/35‑1 TAATGGGATAACAGTTTACGAACCCGTTGTGGCTT > 1:13256123/1‑35 TAATGGGATAACAGTTTACGAACCCGTTGTGGCTT > 1:15061115/1‑35 AATGGGATAACAGTTTACGAACCCGTTGTGGCTTT > 1:11809133/1‑35 AATGGGATAACAGTTTACGAACCCGTTGTGGCTTT > 1:1189500/1‑35 AATGGGATAACAGTTTACGAACCCGTTGTGGCTTT > 1:16506494/1‑35 AATGGGATAACAGTTTACGAACCCGTTGTGGCTTT > 1:15386371/1‑35 AATGAGATAACAGTTTACGAACCCGTTGTGGCTTT > 1:7787117/1‑35 ATGGGATAACAGTTTACGAACCCGTTGTGGCTTTT > 1:15918728/1‑35 ATGGGATAACAGTTTACGAACCCGTTGTGGCTTTT > 1:3153866/1‑35 TGGGATAACAGTTTACGAACCCGTTGTGGCTTTTT > 1:17527816/1‑35 TGGGATAACAGTTTACGAACCCGTTGTGGCTTTTT > 1:14660304/1‑35 GGGATAACAGTTTACGAACCCGTTGTGGCTTTTTa > 1:1496584/1‑34 GGGATAACAGTTTACGAACCCGTTGTGGCTTTTTT > 1:4380870/1‑35 GGATAACAGTTTACGAACCCGTTGTGGCTTTTTat > 1:17761369/1‑33 GGATAACAGTTTACGAACCCGTTGTGGCTTTTTTT > 1:18687608/1‑35 GGATAACAGTTTACGAACCCGTTGTGGCTTTTTTT > 1:15467329/1‑35 GGATAACAGTTTACGAACCCGTTGTGGCTTTTTTT > 1:12334072/1‑35 GATAACAGTTTACGAACCCGTTGTGGCTTTTTATT > 1:14916440/1‑35 ATAACAGTTTACGAACCCGTTGTGGCTTTTTTTTT > 1:17182702/1‑35 TAACAGTTTACGAACCCGTTGTGGCTTTTTTTgtt > 1:6497796/1‑32 TAACAGTTTACGAACCCGTTGTGGCTTTTTTTTTG > 1:5139475/1‑35 AACAGTTTACGAACCCGTTGTGGCTTTTTTTGTGA > 1:10940642/1‑35 AACAGTTTACGAACCCGTTGTGGCTTTTTATTTGA > 1:17592800/1‑35 ACAGTTTACGAACCCGTTGTGGCTTTTTTTTTGAT > 1:4710806/1‑35 ACAGTTTACGAACCCGTTGTGGCTTTTTATTTGAT > 1:15470787/1‑35 CAGTTTACGAACCCGTTGTGGCTTTTTTTTTGATt > 1:11285710/1‑34 AGTTTACGAACCCGTTGTGGCTTTTTTTGTGATCT > 1:7287443/1‑35 AGTTTACGAACCCGTTGTGGCTTTTTATTTGATCT > 1:658693/1‑35 GTTTACGAACCCGTTGTGGCTTTTTTTTTGATttg > 1:17808384/1‑32 TTTACGAACCCGTTGTGGCTTTTTTTTTGGTCTTa > 1:7269684/1‑34 TTTACGAACCCGTTGTGGCTTTTTTTTTGATCTTa > 1:4304177/1‑34 TGGCTTTTTTTTTGATCTTTCGTTCTCAATTTATC > 1:11777784/1‑35 TGGCTTTTTTTTTGATCTTTCGTTCTCAATTTATC < 1:15057371/35‑1 ggtTTTTTTTTTGATCTTTCGTTCTCAATTTATCC < 1:3803507/32‑1 GGCTTTTTTTTTGATCTTTCGTTCTCAATTTATCC > 1:16009778/1‑35 tCTTTTTTTTTGATCTTTCGTTCTCAATTTATCCA < 1:2797749/34‑1 ggcTTTTTTTTGATCTTTCGTTCTCAATTTATCCA < 1:9527668/32‑1 GCTTTTTTTTTGATCTTTCGTTCTCAATTTATCCA > 1:16714711/1‑35 GCTTTTTTTTTGATCTTTCGTTCTCAATTTATCCA < 1:2114575/35‑1 GCTTTTTTTTTGATCTTTCGTTCTCAATTTATCCA > 1:7777932/1‑35 CTTTTTTTTTGATCTTTCGTTCTCAATTTATCCAC > 1:8367429/1‑35 CTTTTTTTTTGATCTTTCGTTCTCAATTTATCCAC > 1:6123365/1‑35 CTTTTTTTTTGATCTTTCGTTCTCAATTTATCCAC > 1:12164257/1‑35 CTTTTTTTTTGATCTTTCGTTCTCAATTTATCCAC < 1:16028015/35‑1 CTTTTTTTTTGATCTTTCGTTCTCAATTTATCCAC < 1:19729622/35‑1 TTTTTTTTTGATCTTTCGTTCTCAATTTATCCACG > 1:11692822/1‑35 TTTTTTTTTGATCTTTCGTTCTCAATTTATCCACG > 1:9480778/1‑35 TTTTTTTTTGATCTTTCGTTCTCAATTTATCCACG > 1:4118029/1‑35 TTTTTTTTTGATCTTTCGTTCTCAATTTATCCACG > 1:16434492/1‑35 TTTTTTTTTGATCTTTCGTTCTCAATTTATCCACG < 1:20053322/35‑1 TTTTTTTTTGATCTTTCGTTCTCAATTTATCCACG < 1:18576006/35‑1 TTTTTTTTGATCTTTCGTTCTCAATTTATCCACGG < 1:12923617/35‑1 TTTTTTTTGATCTTTCGTTCTCAATTTATCCACGG < 1:5160531/35‑1 TTTTTTTGATCTTTCGTTCTCAATTTATCCACGGG < 1:13899413/35‑1 TTTTTTTGATCTTTCGTTCTCAATTTATCCACGGG > 1:2770833/1‑35 TTTTTTTGATCTTTCGTTCTCAATTTATCCACGGG > 1:19402635/1‑35 TTTTTTTGATCTTTCGTTCTCAATTTATCCACGGG < 1:9487265/35‑1 TTTTTTTGATCTTTCGTTCTCAATTTATCCACGGG < 1:19330174/35‑1 TTTTTTTGATCTTTCGATCTCAATTTATCCACGGG > 1:19745571/1‑35 TCATGTAATGGGATAACAGTTTACGAACCCGTTGTGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2183066‑2183026 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctttTTTTTTGATCTTTCGTTCTCAATTTATCCACGGG < REL606/3512380‑3512347 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |