New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3310921 | 77 (0.750) | 8 (0.110) | 3/34 | NT | 15.0% | coding (824/1068 nt) | degS | serine endoprotease, periplasmic |
? | REL606 | 4603001 = | 36 (0.490) | coding (287/780 nt) | yjjV | predicted DNase |
Only 100 of 184 total aligned reads displayed.
CGCGAGATCGCACCACTGCACGCACAGAGCGGTGGTATAGATCAACTGCAAGGGATCGTGGTTAATGAA > REL606/3310887‑3310955 | cgcgAGATCGCACCACTGCACGCACATAGCGGTGG > 1:16518741‑M1/1‑35 (MQ=255) cgcgAGATCGCACCACTGCACGCACAGAGCGGTGG < 1:18934222‑M1/35‑1 (MQ=255) gcgAGATCGCACCACTGCACGCACAGAGCggtggt < 1:16086006/35‑1 (MQ=255) gcgAGATCGCACCACTGCACGCACAGAGCggtggt < 1:650713/35‑1 (MQ=255) gcgAGATCGCACCACTGCACGCACAGAGCGGTGGg > 1:4388828‑M1/1‑34 (MQ=255) gcgAGATCGCACCACTGCACGCACAGAGCGGTGGg > 1:4683564‑M1/1‑34 (MQ=255) gcgAGATCGCACCACTGCACGCACAGAGCGGTGGg > 1:13177332‑M1/1‑34 (MQ=255) gcgAGATCGCACAACTGCACGCACAGAGCggtggt < 1:4571362/35‑1 (MQ=255) cgAGATCGCACCACTGCACGCACAGAGCGGTGGta < 1:10143075/35‑1 (MQ=255) cgAGATCGCACCACTGCACGCACAGAGCGGTGGgg > 1:20425053‑M1/1‑33 (MQ=255) cgAGATCGCACCACTGCACGCACAGAGCGGTGGgg > 1:3848001‑M1/1‑33 (MQ=255) gagaTCGCACCACTGCACGCACAGAGCGGTGGtat < 1:6180494/35‑1 (MQ=255) gagaTCGCACCACTGCACGCACAGAGCGGTGGtat < 1:12146886/35‑1 (MQ=255) gagaTCGCACCACTGCACGCACAGAGCGGTGGtat < 1:5818409/35‑1 (MQ=255) gagaTCGCACCACTGCACGCACAGAGCGGTGGtat < 1:1987492/35‑1 (MQ=255) gagaTCGCACCACTGCACGCACAGAGCGGTGGtat < 1:20295169/35‑1 (MQ=255) gagaTCGCACCACTGCACGCACAGAGCGGTGGtat < 1:2631133/35‑1 (MQ=255) gagaTCGCACCACTGCACGCACAGAGCGGTGGggt > 1:1079402‑M1/1‑32 (MQ=255) gagaTCGCACCACTGCACGCACAGAGCGGTGGggt > 1:2155901‑M1/1‑32 (MQ=255) gagaTCGCACCACTGCACGCACAGAGCGGTGGggg > 1:14453017‑M1/1‑32 (MQ=255) agaTCGCACCACTGCACGCACAGAGCGGTGGtata < 1:2988667/35‑1 (MQ=255) agaTCGCACCACTGCACGCACAGAGCGGTGGggtc > 1:8604518‑M1/1‑31 (MQ=255) gaTCGCACCACTGCACGCACAGAGCGGTGGggtag > 1:2018311‑M1/1‑30 (MQ=255) gaTCGCACCACTGCACGCACAGAGCGGTGGggtag > 1:17451229‑M1/1‑30 (MQ=255) gaTCGCACCACTGCACGCACAGAGCGGTGGggtag > 1:5295713‑M1/1‑30 (MQ=255) gaTCGCACCACTGCACGCACAGAGCGGTGGggccc > 1:18632016‑M1/1‑30 (MQ=255) gaTCGCACCACTGCACGCACAGAGCGGTGGTATAg < 1:9013080/35‑1 (MQ=255) aTCGCACCACTGCACGCACAGAGCGGTGGgggagg > 1:4472139‑M1/1‑29 (MQ=255) aTCGCACCACTGCACGCACAGAGCGGTGGTATAGa < 1:7490509/35‑1 (MQ=255) tCGCACCACTGCACGCACAGAGCGGTGGgggagat > 1:4171119‑M1/1‑28 (MQ=255) tCGCACCACTGCACGCACAGAGCGGTGGTATAGAt < 1:1430450/35‑1 (MQ=255) cGCACCACTGCACGCACAGAGCGGTGGggtagatc > 1:7283460‑M1/1‑27 (MQ=255) cGCACCACTGCACGCACAGAGCGGTGGTATAGATc < 1:17194177/35‑1 (MQ=255) gCACCACTGCACGCACAGAGCGGTGGggtagatca > 1:8755187‑M1/1‑26 (MQ=255) gCACCACTGCACGCACAGAGCGGTGGTATAGATCa < 1:19647913/35‑1 (MQ=255) caccacTGCACGCACAGAGCGGTGGTATAGATCaa < 1:14402649/35‑1 (MQ=255) accacTGCACGCACAGAGCGGTGGGGTAGATAAAc > 1:20552364/1‑35 (MQ=25) ccacTGCACGCACAGAGCGGTGGTATAGATCAACt < 1:19145320/35‑1 (MQ=255) cacTGCACGCACAGAGCGGTGGTATAGATCAACTg < 1:3459880/35‑1 (MQ=255) cacTGCACGCACAGAGCGGTGGTATAGATCAACTg < 1:7820676/35‑1 (MQ=255) cacTGCACGCACAGAGCGGTGGTATAGATCAACTg < 1:18460568/35‑1 (MQ=255) cacTGCACGCACAGAGCGGTGGTATAGATCAACTg < 1:17055204/35‑1 (MQ=255) cacTGCACGCACAGAGCGGTGGGGTAGATAAACTg > 1:4062120/1‑35 (MQ=25) cacTGCACGCACAGAGCGGTGGGGGAGATCaaacg > 1:5828271/1‑32 (MQ=16) acTGCACGCACAGAGCGGTGGGGTAGATCAAATGc > 1:15796404/1‑35 (MQ=25) cTGCACGCACAGAGCGGTGGTATAGATCAACTGCa < 1:9311997/35‑1 (MQ=255) cTGCACGCACAGAGCGGTGGGGTAGAACAACTGCa > 1:17290023/1‑35 (MQ=25) tGCACGCACAGAGCGGTGGTATAGATCAACTGCaa < 1:19180505/35‑1 (MQ=255) tGCACGCACAGAGCGGTGGTATAGATCAACTGCaa < 1:19243679/35‑1 (MQ=255) cacgcacAGAGCGGTGGTATAGATCAACTGCAAgg < 1:17921994/35‑1 (MQ=255) cacgcacAGAGCGGTGGTATAGATCAACTGCAAgg < 1:16734019/35‑1 (MQ=255) acgcacAGAGCGGTGGTATAGATCAACTGCAAggg < 1:15068851/35‑1 (MQ=255) cgcacAGAGCGGTGGTATAGATCAACTGCAAGGGa < 1:12876705/35‑1 (MQ=255) cgcacAGAGCGGTGGTATAGATCAACTGCAAGGGa < 1:20508341/35‑1 (MQ=255) cacaGAGCGGTGGTATAGATCAACTGCAAGGGATc < 1:13996991/35‑1 (MQ=255) acaGAGCGGTGGTATAGATCAACTGCAAGGGATCg < 1:15648810/35‑1 (MQ=255) acaGAGCGGTGGTATAGATCAACTGCAAGGGATCg < 1:20553151/35‑1 (MQ=255) acaGAGCGGTGGTATAGATCAACTGCAAGGGATCg < 1:10304389/35‑1 (MQ=255) caGAGCGGTGGTATAGATCAACTGCAAGGGATCGt < 1:11481807/35‑1 (MQ=255) caGAGCGGTGGTATAGATCAACTGCAAGGGATCGt < 1:18327055/35‑1 (MQ=255) agagCGGTGGTATAGATCAACTGCAAGGGATCGTg < 1:6716356/35‑1 (MQ=255) agagAGGTGGTATAGATCAACTGCAAGGGATCGTg < 1:13531594/35‑1 (MQ=255) agCGGTGGTATAGATCAACTGCAAGGGATCGTGGt < 1:1795407/35‑1 (MQ=255) agCGGTGGTATAGATCAACTGCAAGGGATCGTGGt < 1:7707131/35‑1 (MQ=255) agCGGTGGTATAGATCAACTGCAAGGGATCGTGGt < 1:14171077/35‑1 (MQ=255) agCGGTGGTATAGATCAACTGCAAGGGATCGTGGt < 1:17001011/35‑1 (MQ=255) gccgtgggggagatcggtctggatctctttggcga < 1:1307703‑M1/32‑29 (MQ=255) gCGGTGGgggagatcggtctggatctctttggcga < 1:5546286‑M1/35‑29 (MQ=255) gCGGTGGgggagatcggtctggatctctttggcga > 1:4960205‑M1/1‑7 (MQ=255) gCGGTGGgggagatcggtctggatctctttggcga < 1:4416061‑M1/35‑29 (MQ=255) gCGGTGGTATAGATCAACTGCAAGGGATCGTGGtt < 1:9860262/35‑1 (MQ=255) gCGGTGGTATAGATCAACTGCAAGGGATCGTGGtt < 1:347356/35‑1 (MQ=255) cGGTGGgggagatcggtctggatctctttggcgac < 1:117376‑M1/35‑30 (MQ=255) cGGTGGTATAGATCAACTGCAAGGGATCGTGGTTa < 1:19451003/35‑1 (MQ=255) ggtggtATAGATCAACTGCAAGGGATCGTGGTTaa > 1:11057697/1‑35 (MQ=255) ggtggtATAGATCAACTGCAAGGGATCGTGGTTaa < 1:11945701/35‑1 (MQ=255) ggTGGgggagatcggtctggatctctttggcgacg > 1:18109663‑M1/1‑5 (MQ=255) ggTGGgggagatcggtctggatctctttggcgacg > 1:6990160‑M1/1‑5 (MQ=255) gtggtATAGATCAACTGCAAGGTATCGTGGTTAAt > 1:2313499/1‑35 (MQ=255) gtggtATAGATCAACTGCAAGGGATCGTGGTTAAt > 1:9474424/1‑35 (MQ=255) gtggtATAGATCAACTGCAAGGGATCGTGGTTAAt < 1:3142390/35‑1 (MQ=255) gtggtATAGATCAACTGCAAGGGATCGTGGTTAAt < 1:5147539/35‑1 (MQ=255) gtggtATAGATCAACTGCAAGGGATCGTGGTTAAt < 1:6814636/35‑1 (MQ=255) gTGGgggagatcggtctggatctctttggcgacga > 1:17706931‑M1/1‑4 (MQ=255) gTGGgggagatcggtctggatctctttggcgacga < 1:15287085‑M1/35‑32 (MQ=255) tggtATAGATCAACTGCAAGGGATCGTGGTTAATg < 1:4202057/35‑1 (MQ=255) tGGgggagatcggtctgtatctctttggcgacgat > 1:8540497‑M1/1‑3 (MQ=255) tGGgggagatcggtctggatctctttggcgacgat < 1:10611201‑M1/35‑33 (MQ=255) ggtATAGATCAACTGCAAGGGATCGTGGTTAATGa < 1:15962497/35‑1 (MQ=255) ggtATAGATCAACTGCAAGGGATCGTGGTTAATGa > 1:13249788/1‑35 (MQ=255) ggtATAGATCAACTGCAAGGGATCGTGGTTAATGa > 1:18998602/1‑35 (MQ=255) gggggagatcggtctggatctctttggcgacgatc > 1:291380‑M1/1‑2 (MQ=255) gggggagatcggtctggatctctttggcgacgatc > 1:16633455‑M1/1‑2 (MQ=255) gggggagatcggtctggatctctttggcgacgatc > 1:7335806‑M1/1‑2 (MQ=255) gggggagatcggtatggatctctttggcgacgatc > 1:3518159‑M1/1‑2 (MQ=255) gtATAGATCAACTGCAAGGGATCGTGGTTAATGaa > 1:16171325/1‑35 (MQ=255) gtATAGATCAACTGCAAGGGATCGTGGTTAATGaa < 1:11111980/35‑1 (MQ=255) ggggagatcggtctggatctctttggcgacgatcc > 1:3187240‑M1/1‑1 (MQ=255) ggggagatcggtctggatctctttggcgacgatcc > 1:18051980‑M1/1‑1 (MQ=255) ggggagatcggtctggatctctttggcgacgatcc > 1:14712836‑M1/1‑1 (MQ=255) | CGCGAGATCGCACCACTGCACGCACAGAGCGGTGGTATAGATCAACTGCAAGGGATCGTGGTTAATGAA > REL606/3310887‑3310955 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |