New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1539621 = | 78 (0.760) | 11 (0.140) | 5/38 | NT | 16.2% | coding (51/2400 nt) | dos | cAMP phosphodiesterase, heme‑regulated |
? | REL606 | 3527786 = | 52 (0.640) | coding (449/1110 nt) | livK | leucine transporter subunit |
Only 100 of 129 total aligned reads displayed.
GGGCTTCACCGTCTCAAGAATGTATTTTGCCGCCGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTACG > REL606/3527752‑3527820 | gggCTTCACCGTCTCAAGAATGTATTTTGccgccg > 1:16319693/1‑35 (MQ=255) gggCTTCACCGTCTCAAGAATGTATTTTGccgccg > 1:3018201/1‑35 (MQ=255) ggCTTCACCGTCTCAAGAATGTATTTTGCCGCCGt > 1:16110584/1‑35 (MQ=255) ggCTTCACCGTCTCAAGAATGTATTTTGCCGCCGt > 1:14876327/1‑35 (MQ=255) ggCTTCACCGTCTCAAGAATGTATTTTGCCGCCGt > 1:8587826/1‑35 (MQ=255) ggCTTCACCGTCTCAAGAATGTATTTTGCCGCCGt > 1:19603024/1‑35 (MQ=255) ggCTTCACCGTCTCAAGAATGTATTTTGCCGCCGt > 1:14167616/1‑35 (MQ=255) gCTTCACCGTCTCAAGAATGTATTTTGCCGCCGtt > 1:14627952/1‑35 (MQ=255) ttCACCGTCTCAAGAATGTATTTTGCCGCCGTTgg > 1:14829128/1‑35 (MQ=255) tCACCGTCTCAAGAATGTATTTTGCCGCCGTTGGc > 1:3856221/1‑35 (MQ=255) cACCGTCTCAAGAATGTATTTTGCCGCCGTTGGcc > 1:815432/1‑35 (MQ=255) cACCGTCTCAAGAATGTATTTTGCCGCCGGTggac > 1:9103891/1‑33 (MQ=25) aCCGTCTCAAGAATGTATTTTGCCGCCGTTGGgcc > 1:3981198/1‑35 (MQ=255) aCCGTCTCAAGAATGTATTTTGCCGCCGTTGGccc > 1:13297487/1‑35 (MQ=255) cGTCTCAAGAATTTATTTTGCCGCCGTTGGCCCCt > 1:47450/1‑35 (MQ=255) cGTCTCAAGAATGTATTTTGCCGCCGTTGGccccc > 1:19372504/1‑34 (MQ=255) cGTCTCAAGAATGTATTTTGCCGCCGTTGGccccc > 1:203988/1‑34 (MQ=255) cGTCTCAAGAATGTATTTTGCCGCCGTTGGGCCCt > 1:1663539/1‑35 (MQ=255) cGTCTCAAGAATGTATTTTGCCGCCGTTGGCCCCt > 1:13451195/1‑35 (MQ=255) cGTCTCAAGAATGTATTTTGCCGCCGTTGGCCCCt > 1:5392569/1‑35 (MQ=255) gTCTCAAGAATGTATTTTGCCGCCGTTGGCCCCtc > 1:8048188/1‑34 (MQ=255) gTCTCAAGAATGTATTTTGCCGCCGTTGGCCCCTg > 1:19809675/1‑35 (MQ=255) gTCTCAAGAATGTATTTTGCCGCCGTTGGCCCCTg > 1:7379677/1‑35 (MQ=255) ctcAAGAATGTATTTTGCCGCCGTTGGCCCCTggg > 1:3300968/1‑35 (MQ=255) ctcAAGAATGTATTTTGCCGCCGTTGGCCCCTggg > 1:13696847/1‑35 (MQ=255) tcAAGAATGTATTTTGCCGCCGTTGGCCCCTGGGa > 1:19784557/1‑35 (MQ=255) tcAAGAATGTATTTTGCCGCCGTTGGCCCCTGGGa > 1:11474826/1‑35 (MQ=255) tcAAGAATGTATTTTGCCGCCGTTGGCCCCTGGGa > 1:6107157/1‑35 (MQ=255) tcAAGAATGTATTTTGCCGCCGTTGGCCCCTGGGa > 1:9305323/1‑35 (MQ=255) cAAGAATGTTTTTTCCAGCCGTTGGCCCCTGGGaa < 1:16546021/35‑1 (MQ=25) cAAGAATGTATTTTGCCGCCGTTGGCCCCCGGGaa > 1:10607140/1‑35 (MQ=255) aaGATTGTTTTTTCCCGCCGTTGGCCCCTGGGAag < 1:10972953/35‑1 (MQ=25) aaGAATTTTTTTCCCCGCCGTTGGCCCCTGGGAag < 1:17589819/35‑1 (MQ=9) aaGAATGTATTTTGCCGCCGTTGGCCCCTGGGAag > 1:14392424/1‑35 (MQ=255) aaGAATGTATTTTGCCGCCGTTGGCCCCTGGGAag > 1:18965151/1‑35 (MQ=255) aaaatttttttccccgccGTTGGCCCCTGGGAaga < 1:9660419‑M2/17‑1 (MQ=255) aGAATGTATTTTGCCGCCGTTGGCCCCTGGGAaga > 1:3268479/1‑35 (MQ=255) gAATGTATTTTGCCGCCGTTGGCCCCTGGGAagag > 1:8366388/1‑35 (MQ=255) gAATGTATTTTGCCGCCGTTGGCCCCTGGGAagag > 1:12709631/1‑35 (MQ=255) gAATGTATTTTGCCGCCGTTGGCCCCTGGGAagag > 1:17338663/1‑35 (MQ=255) gAATGTATTTTGCCGCCGTTGGCCCCTGGGAagag > 1:18087766/1‑35 (MQ=255) attttttttccccgccGTTGGCCCCTGGGAAGAGt < 1:12168449‑M2/19‑1 (MQ=255) aaTGTATTTTGCCGCCGTTGGCCCCTGGGAAGAGt > 1:10944439/1‑35 (MQ=255) aaTGTATTTTGCCGCCGTTGGCCCCTGGGAAGAGt > 1:14982870/1‑35 (MQ=255) aaTGTATTTTGCCGCCGTTGGCCCCTGGGAAGAGt > 1:3068429/1‑35 (MQ=255) gtGTATTTCGCCGCCGTTGGCCCCTGGGAAGAGTc < 1:15994816/34‑1 (MQ=255) atttttttccccgccGTTGGCCCCTGGGAAGAGTc < 1:16834771‑M2/20‑1 (MQ=255) aTGTATTTTGCCGCCGTTGGCCCCTGGGAAGAGTc > 1:356462/1‑35 (MQ=255) tttttttccccgccGTTGGCCACTGGGAAGAGTcc < 1:5902689‑M2/21‑1 (MQ=255) tgtttttccccgccGTTGGCCCCTGGGAAGAGTcc < 1:13282931‑M2/21‑1 (MQ=255) tGTATTTTGCCGCCGTTGGCCCCTGTGAAGAGTcc > 1:10818927/1‑35 (MQ=255) ttttttccccgccGTTGGCCCCTGGGAAGAGTCCa < 1:15140067‑M2/22‑1 (MQ=255) ttatttccccgccGTTGGCCCCTGGGAAGAGTCCa < 1:17159259‑M2/22‑1 (MQ=255) gtttttccccgccGTTGGCCCCTGGGAAGAGTCCa < 1:13309650‑M2/22‑1 (MQ=255) gTATTTTGCCGCCGTTGGCCCCTGGGAAGAGTCCa > 1:2814065/1‑35 (MQ=255) tttttccccgccGTTGGCCCCTGGGAAGAGTCCAg < 1:2207069‑M2/23‑1 (MQ=255) tATTTTGCCGCCGTTGGCCCCTGGGAAGAGTCCAg > 1:6728744/1‑35 (MQ=255) tttcccccgccGTTGGCCCCTGGGAAGAGTCCAGc < 1:2147787‑M2/24‑1 (MQ=255) aTTTTGCCGCCGTTGGCCCCTGGGAAGAGTCCAGc > 1:11289358/1‑35 (MQ=255) aTTTTGCCGCCGTTGGCCCCTGGGAAGAGTCCAGc > 1:10666242/1‑35 (MQ=255) ttttGCCGCCGTTGGCCCCTGGGAAGAGTCCAGcc > 1:10434527/1‑35 (MQ=255) ttcccccgccGTTGGCCCCTGGGAAGAGTCCAGcc < 1:14228584‑M2/25‑1 (MQ=255) tttcccgccGTTGGCCCCTGGGAAGAGTCCAGccc < 1:7347143‑M2/26‑1 (MQ=255) tttGCCGCCGTTGGCCCCTGGGAAGATTCCAGccc > 1:4777462/1‑35 (MQ=255) tttGCCGCCGTTGGCCCCTGGGAAGAGTCCAGccc > 1:8665800/1‑35 (MQ=255) tttGCCGCCGTTGGCCCCTGGGAAGAGTCCAGccc > 1:11384322/1‑35 (MQ=255) tttGCCGCCGTTGGCCCCTGGGAAGAGTCCAGccc > 1:19235421/1‑35 (MQ=255) ttccccgccGTTGGCCCCTGGGAAGAGTCCAGccc < 1:13678177‑M2/26‑1 (MQ=255) ttccccgccGTTGGCCCCTGGGAAGAGTCCAGccc < 1:65846‑M2/26‑1 (MQ=255) ttccccgccGTTGGCCCCTGGGAAGAGTCCAGccc < 1:15224021‑M2/26‑1 (MQ=255) tcccccgccGTTGGCCCCTGGGAAGAGTCCAGccc < 1:14740056‑M2/26‑1 (MQ=255) tccccgccGTTGGCCCCTGGGAAGAGTCCAGCCCg < 1:17185309‑M2/27‑1 (MQ=255) gccccgccGTTGGCCCCTGGGAAGAGTCCAGCCCg < 1:7626006‑M2/27‑1 (MQ=255) gcccgccGTTGGCCCCTGGGAAGAGTCCAGCCCgg < 1:19832829‑M2/28‑1 (MQ=255) ccccgccGTTGGCCCCTGGGAAGAGTCCAGCCCgg < 1:7921637‑M2/28‑1 (MQ=255) ccccgccGTTGGCCCCTGGGAAGAGTCCAGCCCgg < 1:2585763‑M2/28‑1 (MQ=255) gccgccGTTGGCCCCTGGGAAGAGTCCAGCCCGGc > 1:19337513/1‑35 (MQ=255) cccgccGTTGGCCCCTGGGAAGAGTCCAGCCCGGc < 1:14369371‑M2/29‑1 (MQ=255) cccgccGTTGGCCCCGGGGAAGAGTCCAGCCCGGc < 1:8100455‑M2/29‑1 (MQ=255) accgccGTTGGCCCCTGGGAAGAGTCCAGCCCGGc < 1:2440379‑M2/29‑1 (MQ=255) ccgccGTTGGCCCCTGGGAAGAGTCCAGCCCGGCa < 1:4918719‑M2/30‑1 (MQ=255) cgccGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAg > 1:17040026‑M2/5‑35 (MQ=255) cgccGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAg < 1:16554847‑M2/31‑1 (MQ=255) gccGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGt > 1:8733168‑M2/4‑35 (MQ=255) gccGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGt > 1:18577446‑M2/4‑35 (MQ=255) gccGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGt > 1:7419321‑M2/4‑35 (MQ=255) ccGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTa > 1:971959‑M2/3‑35 (MQ=255) ccGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTa > 1:13040528‑M2/3‑35 (MQ=255) cGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTAc < 1:18951218‑M2/34‑1 (MQ=255) cGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTAc > 1:13673035‑M2/2‑35 (MQ=255) cGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTAc > 1:11160578‑M2/2‑35 (MQ=255) cGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTAc < 1:10221696‑M2/34‑1 (MQ=255) cGTTGGCCCCTGGGAAGAGTCCAGACCGGCAGTAc < 1:7530472‑M2/34‑1 (MQ=255) gTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTACg < 1:8091912/35‑1 (MQ=255) gTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTACg < 1:5445067/35‑1 (MQ=255) gTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTACg > 1:5307738/1‑35 (MQ=255) gTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTACg > 1:4778569/1‑35 (MQ=255) gTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTACg > 1:19164998/1‑35 (MQ=255) gTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTACg < 1:915234/35‑1 (MQ=255) gTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTACg > 1:9206769/1‑35 (MQ=255) | GGGCTTCACCGTCTCAAGAATGTATTTTGCCGCCGTTGGCCCCTGGGAAGAGTCCAGCCCGGCAGTACG > REL606/3527752‑3527820 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |