New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 640120 = | 107 (1.040) | 10 (0.100) | 3/46 | NT | 11.1% | intergenic (+38/+17) | cspE/ccrB | cold shock protein E/camphor resistance protein CrcB |
? | REL606 | 2388696 = | 58 (0.590) | coding (457/810 nt) | yfcA | conserved inner membrane protein |
CCGGCAGCCGGGCCAAAGAATCCATCATAAAAACCGACGCAGCCACCGGCTATTAACGCGAAGGGTAAA > REL606/2388662‑2388730 | cgagCAGCCGGGCCAAAGAATCCATCATAAAAAcc < 1:716323/32‑1 (MQ=255) ccGGCAGCCGGGCCAAAGAATCCATCATAAAAAcc < 1:14767140/35‑1 (MQ=255) ccGGCAGCCGGGCCAAAGAATCCATCATAAAAAcc < 1:19360966/35‑1 (MQ=255) cGGCAGCCGGGCCAAAGAATCCATCATAAAAACCg > 1:13714857/1‑35 (MQ=255) cGGCAGCCGGGCCAAAGAATCCATCATAAAAACCg < 1:7731394/35‑1 (MQ=255) cGGCAGCCGGGCCAAAGAATACATCATAAAAACCg < 1:10491481/35‑1 (MQ=255) ggCAGCCGGGCCAAAGAATCCATCATAAAAACCGa > 1:2257727/1‑35 (MQ=255) gCAGCCGGGCCAAAGAATCCATCATAAAAACCGat > 1:2527607/1‑34 (MQ=255) gCAGCCGGGCCAAAGAATCCATCATAAAAACCGAc > 1:18570560/1‑35 (MQ=255) gCAGCCGGGCCAAAGAATCCATCATAAAAACCGAc > 1:748987/1‑35 (MQ=255) aGCCTGGCCAAAGAATCCATCATAAAAACCGATGc > 1:9846371/1‑35 (MQ=37) aGCCGGGCCAAAGAATCCATCATAAAAACCGACGc > 1:15990489/1‑35 (MQ=255) aGCCGGGCCAAAGAATCCATCATAAAAACCGACGc > 1:15776120/1‑35 (MQ=255) aGCCGGGCCAAAGAATCCATCATAAAAACCGACGc > 1:16905944/1‑35 (MQ=255) aGCCGGGCCAAAGAATCCATCATAAAAACCGACGc > 1:12825031/1‑35 (MQ=255) aGCCGGGCCAAAGAATCCATCATAAAAACCGACGc > 1:8579444/1‑35 (MQ=255) aGCCGGGCCAAAGAATCCATCATAAAAACCGACGc > 1:9602438/1‑35 (MQ=255) gCCGGGCCAAAGAATCCATCATAAAAACCGACGCa > 1:3637908/1‑35 (MQ=255) ccaggCCAAAGAATCCATCATAAAAACCGACGCAg > 1:4061769/4‑35 (MQ=255) ccGGGCCAAAGAATCCATCATAAAAACCGACGCAg > 1:19040755/1‑35 (MQ=255) ccGGGCCAAAGAATCCATCATAAAAACCGACGCAg > 1:12161983/1‑35 (MQ=255) cGGGCCAAAGAATCCATCATAAAAACCGACGCAGc > 1:14853285/1‑35 (MQ=255) cGGGCCAAAGAATCCATCATAAAAACCGACGCAGc > 1:4734498/1‑35 (MQ=255) cGGGCCAAAGAATCCATCATAAAAACCGACGCAGc > 1:10284367/1‑35 (MQ=255) cGGGCCAAAGAATCCATCATAAAAACCGACGCAGc > 1:1524029/1‑35 (MQ=255) cGGGCCAAAGAATCCATCATAAAAACCGACGCAGc > 1:1931697/1‑35 (MQ=255) gggCCAAAGAATCCATCATAAACACCGACGCAGcc > 1:1468040/1‑35 (MQ=255) gggCCAAAGAATCCATCATAAAAACCGACGCAGcc > 1:17193443/1‑35 (MQ=255) gggCCAAAGAATCCATCATAAAAACCGACGCAGcc > 1:8405905/1‑35 (MQ=255) gggCCAAAGAATCCATCATAAAAACCGACGCAGcc > 1:11023692/1‑35 (MQ=255) gggCCAAAGAATCCATCATAAAAACCGACGCAGcc > 1:17387530/1‑35 (MQ=255) gggCCAAAGAATCCATCATAAAAACCGACGCAGcc > 1:7075068/1‑35 (MQ=255) gggCCAAAGAATCCATCATAAAAACCGACGCAGcc > 1:14406809/1‑35 (MQ=255) ggCCAAAGAATCCATCATAAAAACCGACGCAGCCa > 1:7079506/1‑35 (MQ=255) ggCCAAAGAATCCATCATAAAAACCGACGCAGCCa > 1:18624775/1‑35 (MQ=255) gCCAAATAATCCATCATAAAAACCGACGCAGCCAc > 1:17872008/1‑35 (MQ=255) gCCAAAGAATCCATCATAAAAACCGACGCAGCCAc > 1:19511603/1‑35 (MQ=255) gCCAAAGAATCCATCATAAAAACCGACGCAGCCAc > 1:622973/1‑35 (MQ=255) gCCAAAGAATCCATCATAAAAACCGACGCAGCCAc > 1:4077784/1‑35 (MQ=255) ccAAAGAATCCATCATAAAAACCGACGCAGCCAcc > 1:8281609/1‑35 (MQ=255) ccAAAGAATCCATCATAAAAACCGACGCAGCCAcc > 1:20121483/1‑35 (MQ=255) cAAAGAATCCATCATAAAAACCGACGCAGCCACCg > 1:11507169/1‑35 (MQ=255) cAAAGAATCCATCATAAAAACCGACGCAGCCACCg > 1:10371545/1‑35 (MQ=255) aaaGAATCCATCATAAAAACCGACGCAGCCACCgg > 1:3245827/1‑35 (MQ=255) aaGAATCCATCATAAAAACCGACGCAGCCACCGGc > 1:13596585/1‑35 (MQ=255) aaGAATCCATCATAAAAACCGACGCAGCCACCGGc > 1:15487370/1‑35 (MQ=255) aGAATCCATCATAAAAACCGACGCAGCCACCGGCt > 1:2907947/1‑35 (MQ=255) aGAATCCATCATAAAAACCGACGCAGCCACCGGCt > 1:9579558/1‑35 (MQ=255) aGAATCCATCATAAAAACCGACGCAGCCACCGGCt > 1:4429203/1‑35 (MQ=255) aGAATCCATCATAAAAACCGACGCAGCCACCGGCt > 1:16552282/1‑35 (MQ=255) gAATCCATCATAAAAACCGACGCAGCCACCGGCTa > 1:6956555/1‑35 (MQ=255) gAATCCATCATAAAAACCGACGCAGCCACCGGCTa > 1:15111896/1‑35 (MQ=255) gAATCCATCATAAAAACCGACGCAGCCACCGGCTa > 1:8476855/1‑35 (MQ=255) aaaccaaaaaaaaacccCGACGCAGCCACCGGCTa < 1:4555264‑M2/18‑1 (MQ=255) actCCATCATAAAAACCGACGCAGCCACCGGCTaa > 1:9159802/3‑34 (MQ=255) aaTCCATCATAAAAACCGACGCAGCCACCGGCTaa > 1:14663552/1‑34 (MQ=255) aaTCCATCATAAAAACCGACGCAGCCACCGGCTaa > 1:10506433/1‑34 (MQ=255) aTCCATCATAAAAACCGACGCAGCCACCGGCTaat > 1:10849047/1‑33 (MQ=255) aTCCATCATAAAAACCGACGCAGCCACCGGCTaat > 1:9068004/1‑33 (MQ=255) aTCCATCATAAAAACCGACGCAGCCACCGGCTaat > 1:5346162/1‑33 (MQ=255) aTCCATCATAAAAACCGACGCAGCCACCGGCTaaa > 1:2651499/1‑33 (MQ=255) tCCATCATAAAAACCGACGCAGCCACCGGCTaaaa > 1:2308076/1‑32 (MQ=255) tCCATCATAAAAACCGACGCAGCCACCGGCTaaaa > 1:12085689/1‑32 (MQ=255) tCCATCATAAAAACCGACGCAGCCACCGGCTAATa > 1:3502212/1‑35 (MQ=255) tCCATCATAAAAACCGACGCAGCCACCGGCTAATa > 1:2378948/1‑35 (MQ=255) ccaaaaaaaacccCGACGCAGCCACCGGCTATTaa < 1:17103188‑M2/22‑1 (MQ=255) caaaaaaaaacccCGACGCAGCCACCGGCTATTaa < 1:5023736‑M2/22‑1 (MQ=255) caaaaaaaacccCGACGCAGCCACCGGCTATTAAc < 1:11913648‑M2/23‑1 (MQ=255) caaaaaaacccCGACGCAGCCACCGGCTATTAAcg < 1:17174312‑M2/24‑1 (MQ=255) atcatAAAAACCGACGCAGCCACCGGCTAATaaaa > 1:9654707/1‑33 (MQ=38) atcatAAAAACCGACGCAGCCACCGGCTAATAAca > 1:16605408/1‑34 (MQ=255) aaaaaaaacccCGACGCAGCCACCGGCTATTAAcg < 1:7304020‑M2/24‑1 (MQ=255) aaaaaaaacccCGACGCAGCCACCGGCTATTAAcg < 1:10326732‑M2/24‑1 (MQ=255) aaaaaaaacccCGACGCAGCCACCGGCTATTAAcg < 1:1520549‑M2/24‑1 (MQ=255) tcatAAAAACCGACGCAGCCACCGGCTAATaaaac > 1:4548245/1‑32 (MQ=37) caaaaaacccCGACGCAGCCACCGGCTATTAAcgc < 1:5457112‑M2/25‑1 (MQ=255) tAAAAACCGACGCAGCCACCGGCTAATAAAACGaa > 1:2793215/1‑35 (MQ=25) aaaacccCGACGCAGCCACCGGCTATTAACGCGaa < 1:17624291‑M2/28‑1 (MQ=255) aaaaaCCGACGCAGCCACCGGCTAATAAAACGaaa > 1:9212027/1‑34 (MQ=25) ccccCGACGCAGCCACCGGCTATTAACGCGAAggg < 1:12867182‑M2/31‑1 (MQ=255) acccCGACGCAGCCACCGGCTATTAACGCGAAggg < 1:17102213‑M2/31‑1 (MQ=255) aaaCCGACGCAGCCACCGGCTAAAAAAACGAAggg > 1:5805100/1‑35 (MQ=19) cccCGACGCAGCCACCGGCTATTAACGCGAAGGGt < 1:10151763‑M2/32‑1 (MQ=255) cccCGACGCAGCCACCGGCTATTAACGCGAAGGGt < 1:18905268‑M2/32‑1 (MQ=255) ccCGCCGCAGCCACCGGCTATTAACGCGAAGGGTa < 1:260464‑M2/33‑1 (MQ=255) aCCGACGCAGCCACCGGCTAAAAAAACGAAgggga > 1:4263926/1‑33 (MQ=16) cCGACGCAGCCACCGGCTATTAACGCGAAGGGTaa < 1:12259354‑M2/34‑1 (MQ=255) cCGACGCAGCCACCGGCTATTAACGCGAAGGGTaa < 1:14191187‑M2/34‑1 (MQ=255) cCGACGCAGCCACCGGCTATTAACGCGAAGGGTaa < 1:18332797‑M2/34‑1 (MQ=255) cGACGCAGCCACCGGCTATTAACGCGAAGGGTaaa < 1:236790/35‑1 (MQ=255) cGACGCAGCCACCGGCTATTAACGCGAAGGGTaaa < 1:19839005/35‑1 (MQ=255) cGACGCAGCCACCGGCTAAAAAAACGAAGGGGaaa > 1:20236073/1‑35 (MQ=12) | CCGGCAGCCGGGCCAAAGAATCCATCATAAAAACCGACGCAGCCACCGGCTATTAACGCGAAGGGTAAA > REL606/2388662‑2388730 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |