New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1095862 = | 53 (0.520) | 3 (0.050) | 3/28 | NT | 10.4% | coding (274/1509 nt) | putP | proline:sodium symporter |
? | REL606 | 1585457 = | 21 (0.350) | coding (495/666 nt) | marC | predicted transporter |
TGGCCTGACATTAGGCGCGTGGATCAACTGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCATACCGAAT > REL606/1095828‑1095895 | tGGCCTGACATTAGGCGCGTGGATCAACTGGAAGc > 1:5934951/1‑35 (MQ=255) tGGCCTGACATTAGGCGCGTGGATCAACTGGAAGc < 1:1124877/35‑1 (MQ=255) ggtactgatggttgcgccgccgctgatctttttcc < 1:14201917‑M1/1‑1 (MQ=255) tactgatggttgcgccgccgctgatctttttcCtg < 1:12950621‑M1/3‑1 (MQ=255) gCCTGACATTAGGCGCGTGGATGAACTGGAAGCtg < 1:20135029/35‑1 (MQ=255) gCCTGACATTAGGCGCGTGGATCAACTGGAAGCtg < 1:5639359/35‑1 (MQ=255) gCCTGACATTAGGCGCGTGGATCAACTGGAAGCtg < 1:5120047/35‑1 (MQ=255) gCCTGACATTAGGCGCGTGGATCAACTGGAAGCtg > 1:20048420/1‑35 (MQ=255) gCCTGACATTAGGCGCGTGGATCAACTGGAAGCtg < 1:8105731/35‑1 (MQ=255) gCCTGACATTAGGCGCGTGGATCAACTGGAAGCtg < 1:3390832/35‑1 (MQ=255) gCCTGACATTAGGCGCGTGGATCAACTGGAAGCtg > 1:3042671/1‑35 (MQ=255) gCCTGACATTAGGCGCGTGGATCAACTGGAAGCtg > 1:6548571/1‑35 (MQ=255) gCCTGACATTAGGCGCGTGGATCAACTGGAAGCtg < 1:9429262/35‑1 (MQ=255) ccTGACATTATGCGCGTGGATCAACTGGAAGCtgg > 1:6592603/1‑35 (MQ=255) ccTGACATTAGGCGCGTGGATCAACTGGAAGCtgg < 1:13317223/35‑1 (MQ=255) ccTGACATTAGGCGCGTGGATCAACTGGAAGCtgg > 1:3321076/1‑35 (MQ=255) actgatggctgcgccgccgctgatctttttcCtgg < 1:16332014‑M1/4‑1 (MQ=255) cTGACATTAGGCGCGTGGATCAACTGGAAGCtggt > 1:12754904/1‑35 (MQ=255) cTGACATTAGGCGCGTGGATCAACTGGAAGCtggt < 1:6595617/35‑1 (MQ=255) cTGACATTAGGCGCGTGGATCAACTGGAAGCtggt > 1:2057529/1‑35 (MQ=255) cTGACATTAGGCGCGTGGATCAACTGGAAGCtggt < 1:9147629/35‑1 (MQ=255) tGACATTAGGCGCGTGGATCAACTGGAAGCtggtg < 1:17049005/35‑1 (MQ=255) tGACATTAGGCGCGTGGATCAACTGGAAGCtggtg > 1:5909442/1‑35 (MQ=255) tGACATTAGGCGCGTGGATCAACTGGAAGCtggcg < 1:9725554/35‑3 (MQ=255) gACATTAGGCGCGTGGATCAACTGGAAGCtggtgg > 1:11545028/1‑35 (MQ=255) gACATTAGGCGCGTGGATCAACTGGAAGCtggtgg > 1:19733946/1‑35 (MQ=255) gACATTAGGCGCGTGGATCAACTGGAAGCtggtgg > 1:16714048/1‑35 (MQ=255) atggttgcgccgccgctgatctttttcCTGGTggc < 1:14666411‑M1/8‑1 (MQ=255) atggttgcgccgccgctgatctttttcCTGGTggc < 1:14051809‑M1/8‑1 (MQ=255) atggttgcgccgccgctgatccttttcCTGGTggc < 1:1235556‑M1/8‑1 (MQ=255) aCATTAGGCGCGTGGATCAACTGGAAGCTGGTggc < 1:19338574/35‑1 (MQ=255) aCATTAGGCGCGTGGATCAACTGGAAGCTGGTggc < 1:10484463/35‑1 (MQ=255) tggtttcgccgccgctgatctttttcCTGGTggcg < 1:13096617‑M1/9‑1 (MQ=255) tggttgcgccgccgctgatctttttcCTGGTggcg < 1:14405645‑M1/9‑1 (MQ=255) tggctgcgccgccgctgatctttttcCTGGTggcg < 1:20301505‑M1/9‑1 (MQ=255) cATTAGGCGCGTGGATCAACTGGAAGCTGGTggct > 1:8273844/1‑34 (MQ=255) cATTAGGCGCGTGGATCAACTGGAAGCTGGTggcg < 1:1364331/35‑1 (MQ=255) cATTAGGCGCGTGGATCAACTGGAAGCTGGTggcg > 1:5233421/1‑35 (MQ=255) cATTAGGCGCGTGGATCAACTGGAAGCTGGTggcg < 1:1571808/35‑1 (MQ=255) aTTAGGCGCGTGGATCAACTGGAAGCTGGTggcgg > 1:945740/1‑35 (MQ=255) aTTAGGCGCGTGGATCAACTGGAAGCTGGTggcgg > 1:3987080/1‑35 (MQ=255) aTTAGGCGCGTGGATCAACTGGAAGCTGGTggcgg < 1:5788819/35‑1 (MQ=255) ttAGGCGCGTGGATCAACTGGAAGCTGGTggcggg < 1:3164011/35‑1 (MQ=255) ttAGGCGCGTGGATCAACTGGAAGCTGGTggcggg > 1:15151524/1‑35 (MQ=255) ttAGGCGCGTGGATCAACTGGAAGCTGGTggcggg > 1:11924181/1‑35 (MQ=255) gttgcgccgccgctgatctttttcCTGGTggcggg < 1:10089573‑M1/11‑1 (MQ=255) ttgcgccgccgctgatctttttcCTGGTggcgggg < 1:14390364‑M1/12‑1 (MQ=255) tAGGCGCGTGGATCAACTGGAAGCTGGTggcgggg > 1:7370641/1‑35 (MQ=255) tAGGCGCGTGGATCAACTGGAAGCTGGTggcgggg > 1:13456276/1‑35 (MQ=255) tAGGCGCGTGGATCAACTGGAAGCTGGTggcgggg < 1:5438822/35‑1 (MQ=255) aGGCGCGTGGATCAACTGGAAGCTGGTggcggggc > 1:2396960/1‑35 (MQ=255) ggCGCGTGGATCAACTGGAAGCTGGTggcgggggg > 1:4156381/1‑33 (MQ=255) gcgccgccgctgatctttttcCTGgtggcgggggg < 1:303035‑M1/14‑3 (MQ=255) gcgccgccgctgatctttttcCTGgtggcgggggg < 1:4393222‑M1/14‑3 (MQ=255) cgccgccgctgatctttttcCTggtggcggggggt < 1:2207295‑M1/15‑4 (MQ=255) cgccgccgctgatctttttcCTggtggcggggggg < 1:8565600‑M1/15‑4 (MQ=255) gccgccgctgatctttttcCTGGTGGCGGGGGGGt < 1:8492430‑M1/16‑1 (MQ=255) cgcgTGGATCAACTGGAAGCTGGTggctgggcggg > 1:5518324/1‑34 (MQ=255) cgcgTGGATCAACTGGAAGCTGGTGGCGGGGCGGt < 1:20071279/35‑1 (MQ=255) gcgTGGATCAACTGGAAGCTGGTggcggggcgggg > 1:17275752/1‑33 (MQ=255) gcgTGGATCAACTGGAAGCTGGTGGCGGGGCGGtt < 1:3255367/35‑1 (MQ=255) ccgccgctgatctttttcCTGGTGGCGGGGGGGtt < 1:7920503‑M1/17‑1 (MQ=255) cgccgctgatctttttcCTGGTGGCGGGGGGGTTg < 1:4683427‑M1/18‑1 (MQ=255) gTGGATCAACTGGAAGCTGGTGGCGGGGCGGTTGc < 1:4802246/35‑1 (MQ=255) tGGATCAACTGGAAGCTGGTGGCGGGGCGGTTGCg < 1:757909/35‑1 (MQ=255) tGGATCAACTGGAAGCTGGTGGCGGGGCGGTTGCg < 1:12532767/35‑1 (MQ=255) ggATCAACTGGAAGCTGGTGGCGGGGCGGTTGCgt < 1:4704407/35‑1 (MQ=255) ggATCAACTGGAAGCTGGTGGCGGGGCGGTTGCgt < 1:11186943/35‑1 (MQ=255) ggATCAACTGGAAGCTGGTGGCGGGGCGGTTGCgt < 1:12495226/35‑1 (MQ=255) gATCAACTGGAAGCTGGTGGCGGGGCGGTTGCgtg < 1:4159089/35‑1 (MQ=255) gATCAACTGGAAGCTGGTGGCGGGGCGGTTGCgtg < 1:4861405/35‑1 (MQ=255) gATCAACTGGAAGCTGGTGGCGGGGCGGTTGCgtg < 1:9416607/35‑1 (MQ=255) gATCAACTGGAAGCTGGTGGCGGGGCGGTTGCgtg < 1:8456239/35‑1 (MQ=255) gATCAACTAGAAGCTGGTGGCGGGGCGGTTGCgtg < 1:13913238/35‑1 (MQ=255) aTCAACTGGAAGCTGGTGGCGGGGCGGTTGCgtgt < 1:2139565/35‑1 (MQ=255) aTCAACTGGAAGCTGGTGGCGGGGCGGTTGCgtgt < 1:6694719/35‑1 (MQ=255) aTCAACTGGAAGCTGGTGGCGGGGCGGTTGCgtgt < 1:8209786/35‑1 (MQ=255) tCAACTGGAAGCTGGTGGCGGGGCGGTTGCGtgtg < 1:7205239/35‑1 (MQ=255) cAACTGGAAGCTGGTGGCGGGGCGGTTGCGTGTGc < 1:4300261/35‑1 (MQ=255) aaCTGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCa < 1:16355695/35‑1 (MQ=255) aCTGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCAt < 1:17904299/35‑1 (MQ=255) aCTGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCAt < 1:18422444/35‑1 (MQ=255) cTGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCATa < 1:11585153/35‑1 (MQ=255) cTGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCATa < 1:1960277/35‑1 (MQ=255) cTGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCATa < 1:11930522/35‑1 (MQ=255) cTGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCATa < 1:710627/35‑1 (MQ=255) tGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCATAc < 1:1425180/35‑1 (MQ=255) tGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCATAc < 1:4462790/35‑1 (MQ=255) tGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCATAc < 1:1634908/35‑1 (MQ=255) tGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCATAc < 1:19446920/35‑1 (MQ=255) ggAAGCTGGTGGCGGGGCGGTTGCGTGTGCATAcc < 1:16010251/35‑1 (MQ=255) ggAAGCTGGTGGCGGGGCGGTTGCGTGTGCATAcc < 1:9120203/35‑1 (MQ=255) ggAAGCTGGTGGCGGGGCGGTTGCGTGTGCATAcc < 1:11337148/35‑1 (MQ=255) gAAGCTGGTGGCGGGGCGGTTGCGTGTGCATACCg < 1:12145367/35‑1 (MQ=255) gAAGCTGGTGGCGGGGCGGTTGCGTGTGCATACCg < 1:3972529/35‑1 (MQ=255) gAAGCTGGTGGCGGGGCGGTTGCGTGTGCATACCg < 1:1078510/35‑1 (MQ=255) aaGCTGGTGGCGGGGCGGTTGCGTGTGCATACCGa < 1:9130201/35‑1 (MQ=255) aGCTGGTGGCGGGGCGGTTGCGTGTGCATACCGaa < 1:6756401/35‑1 (MQ=255) gCTGGTGGCGGGGCGGTTGCGTGTGCATACCGAAt < 1:14517326/35‑1 (MQ=255) | TGGCCTGACATTAGGCGCGTGGATCAACTGGAAGCTGGTGGCGGGGCGGTTGCGTGTGCATACCGAAT > REL606/1095828‑1095895 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |