New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 312869 = | 100 (0.970) | 13 (0.150) | 6/40 | NT | 13.5% | coding (56/951 nt) | yahI | predicted carbamate kinase‑like protein |
? | REL606 | 4351443 = | 83 (0.970) | intergenic (+51/‑87) | groEL/yjeI | chaperonin GroEL/hypothetical protein |
Only 100 of 162 total aligned reads displayed.
GCCATTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTG > REL606/312835‑312903 | tcttatactagaaagatgaccaaaagaaaaacccc > 1:1344165‑M1/35‑35 (MQ=255) tcttatactagaaagatgaccaaaagaaaaacccc > 1:14595200‑M1/35‑35 (MQ=255) tcttatactagaaagatgaccaaaagaaaaacccc > 1:4410676‑M1/35‑35 (MQ=255) tcttatactagaaagatgaccaaaagaaaaacccc < 1:3626134‑M1/1‑1 (MQ=255) gCCATTGGTGGCAACAGCATTATCAAAGATAACgc < 1:13688427/35‑1 (MQ=255) gCCATTGGTGGCAACAGCATTATCAAAGATAACgc > 1:4504004/1‑35 (MQ=255) gCCATTGGTGGCAACAGCATTATCAAAGATAACgc > 1:12916888/1‑35 (MQ=255) ccATTGGTGGCAACAGCATTATCAAATATAACgcc > 1:16670639/1‑35 (MQ=255) ccATTGGTGGCAACAGCATTATCAAAGATAACgcc > 1:7563909/1‑35 (MQ=255) ccATTGGTGGCAACAGCATTATCAAAGATAACgcc < 1:11857070/35‑1 (MQ=255) cATTGGTGGCAACAGCATTATCAAAGATAACgcca > 1:8432539/1‑35 (MQ=255) cATTGGTGGCAACAGCATTATCAAAGATAACgcca > 1:2971026/1‑35 (MQ=255) cATTGGTGGCAACAGCATTATCAAAGATAACgcca < 1:17429466/35‑1 (MQ=255) aTTGGTGGCAACAGCATTATCAAAGATAACgccag < 1:13045708/35‑1 (MQ=255) aTTGGTGGCAACAGCATTATCAAAGATAACgccag < 1:16114250/35‑1 (MQ=255) tggtggCAACAGCATTATCAAAGATAACgccagcc < 1:3814766/35‑1 (MQ=255) tggtggCAACAGCATTATCAAAGATAACgccagcc > 1:5897416/1‑35 (MQ=255) tagtggCAACAGCATTATCAAAGATAACgccagcc > 1:224228/3‑35 (MQ=255) gggtggCAACAGCATTATCAAATATAACgccagcc < 1:10064866/34‑1 (MQ=255) ggtggCAACAGCATTATCAAAGATAACgccagcca > 1:927945/1‑35 (MQ=255) ggtggCAACAGCATTATCAAAGATAACgccagcca > 1:9760213/1‑35 (MQ=255) ggtggCAACAGCATTATCAAAGATAACgccagcca > 1:14500089/1‑35 (MQ=255) gtggCAACAGCATTATCAAAGATAACGccagccag > 1:7291721/1‑35 (MQ=255) gtggCAACAGCATTATCAAAGATAACGccagccag < 1:13607571/35‑1 (MQ=255) tggCAACAGCATTATCAAAGATAACGCCAGCCAGt > 1:5626839/1‑35 (MQ=255) tggCAACAGCATTATCAAAGATAACGCCAGCCAGt > 1:2311062/1‑35 (MQ=255) tggCAACAGCATTATCAAAGATAACGCCAGCCAGt > 1:2059179/1‑35 (MQ=255) ggCAACAGCATTATCAAAGATAACGCCAGCCAGTc > 1:7136652/1‑35 (MQ=255) ggCAACAGCATTATCAAAGATAACGCCAGCCAGTc > 1:18625689/1‑35 (MQ=255) gCAACAGCATTATCAAAGATAACGCCAGCCAGTCg > 1:17284303/1‑35 (MQ=255) cAACAGCATTATCAAAGATAACGCCAGCCAGTCGa > 1:576569/1‑35 (MQ=255) cAACAGCATTATCAAAGATAACGCCAGCCAGTCGa > 1:2175723/1‑35 (MQ=255) cAACAGCATTATCAAAGATAACGCCAGCCAGTCGa > 1:6006218/1‑35 (MQ=255) aaCAGCATTATCAAAGATAACGTCAGCCAGTCGAt > 1:19211928/1‑35 (MQ=255) aaCAGCATTATCAAAGATAACGCCAGCCAGTCGAt > 1:6335655/1‑35 (MQ=255) aaCAGCATTATCAAAGATAACGCCAGCCAGTCGAt > 1:8803076/1‑35 (MQ=255) aaCAGCATTATCAAAGATAACGCCAGCCAGTCGAt > 1:1946266/1‑35 (MQ=255) aaCAGCATTATCAAAGATAACGCCAGCCAGTCGAt > 1:14472985/1‑35 (MQ=255) aaCAGCATTATCAAAGATAACGCCAGCCAGTCGAt > 1:4874394/1‑35 (MQ=255) aaCAGCATTATCAAAGATAACGCCAGCCAGTCGAt > 1:11014492/1‑35 (MQ=255) aaCAGCATTATCAAAGATAACGCCAGCAAGTCGAt < 1:10624043/35‑1 (MQ=255) cAGCATTATCAAAGATAACGCCAGCCAGTCGATTg > 1:2022259/1‑35 (MQ=255) cAGCATTATCAAAGATAACGCCAGCCAGTCGATTg > 1:1780149/1‑35 (MQ=255) cAGCATTATCAAAGATAACGCCAGCCAGTCGATTg > 1:1434576/1‑35 (MQ=255) cAGCATTATCAAAGATAACGCCAGCCAGTCGATTg > 1:13695088/1‑35 (MQ=255) cAGCATTATCAAAGATAACGCCAGCCAGTCGATTg > 1:16199539/1‑35 (MQ=255) aGCATTATCAAAGATAACGCCAGCCAGTCGATTGa > 1:8608457/1‑35 (MQ=255) aGCATTATCAAAGATAACGCCAGCCAGTCGATTGa > 1:4587995/1‑35 (MQ=255) gaaTTAACAAAAAAACCCCCAGCCAGTCGATTGAg < 1:154295/33‑1 (MQ=9) gCATTATCAAAGATAACGCCAGCCAGTCGATTGAg > 1:2479780/1‑35 (MQ=255) gCATTATCAAAGATAACGCCAGCCAGTCGATTGAg > 1:2438703/1‑35 (MQ=255) cATTATCGAAGATAACGCCAGCCAGTCGATTGAGc > 1:15558008/1‑35 (MQ=255) cATTATCAAAGATAACGCCAGCCAGTCGATTGAGc > 1:2897433/1‑35 (MQ=255) cATTATCAAAGATAACGCCAGCCAGTCGATTGAGc > 1:6205241/1‑35 (MQ=255) aTTATCAAAGATAACGCCAGCCAGTCGATTGAGCa > 1:15724082/1‑35 (MQ=255) aTTATCAAAGATAACGCCAGCCAGTCGATTGAGCa > 1:7380708/1‑35 (MQ=255) ttATCAAAGATAACGCCAGCCAGTCGATTGAGCAt > 1:10382482/1‑35 (MQ=255) tATCAAAGATAACGCCAGCCAGTCGATTGAGCATc > 1:11538147/1‑35 (MQ=255) tATCAAAGATAACGCCAGCCAGTCGATTGAGCATc > 1:8590515/1‑35 (MQ=255) aTCAAAGATAACGCCAGCCAGTCGATTGAGCATCa > 1:14983604/1‑35 (MQ=255) aaaaaGAAACCCCCAGCCAGTCGATTGAGCATCag < 1:16495586/33‑1 (MQ=21) aaaaaAATACCGCCAGCCAGTCGATTGAGCATCag < 1:11286792/33‑1 (MQ=21) aaaaaAATACCCCCAGCCAGTCGATTGAGCATCag < 1:10815239/33‑1 (MQ=18) cAAAGATAACGCCAGCCAGTCGATTGAGCATCagg > 1:11812107/1‑35 (MQ=255) cAAAGATAACGCCAGCCAGTCGATTGAGCATCagg > 1:19926318/1‑35 (MQ=255) cAAAGATAACGCCAGCCAGTCGATTGAGCATCagg > 1:12581001/1‑35 (MQ=255) cAAAGATAACGCCAGCCAGTCGATTGAGCATCagg > 1:17491268/1‑35 (MQ=255) aaaaaaaacccCCAGCCAGTCGATTGAGCATCagg > 1:14517769‑M1/12‑35 (MQ=255) aaaaGAAACCCCCAGCCAGTCGATTGAGCATCagg < 1:14105015/34‑1 (MQ=25) aaaGATACCCCCAGCCAGTCGATTGAGCATCaggc < 1:10084414/35‑1 (MQ=37) aaaGATAACGCCAGCCAGTCGATTGAGCATCaggc < 1:10465204/35‑1 (MQ=255) aaaAATACCCCCAGCCAGTCGATTGAGCATCaggc < 1:10788307/35‑1 (MQ=21) aaGATAGCGCCAGCCAGTCGATTGAGCATCaggcg < 1:3836892/35‑1 (MQ=255) aaGATAACGCCAGCCAGTCGATTGAGCATCaggcg > 1:3391330/1‑35 (MQ=255) agaaacccCCAGCCAGTCGATTGAGCATCaggcgg > 1:9149837‑M1/9‑35 (MQ=255) aGATAACGCCAGCCAGTCGATTGAGCATCaggcgg > 1:18544802/1‑35 (MQ=255) gATAACGCCAGCCAGTCGATTGAGCATCaggcgga > 1:8062440/1‑35 (MQ=255) gATAACGCCAGCCAGTCGATTGAGCATCaggcgga > 1:19393896/1‑35 (MQ=255) gATAACGCCAGCCAGTCGATTGAGCATCaggcgga > 1:16394523/1‑35 (MQ=255) aatacccCCAGCCAGTCGATTGAGCATCaggcgga > 1:3744699‑M1/8‑35 (MQ=255) aaacccCCAGCCAGTCGATTGAGCATCaggcggag > 1:6734916‑M1/7‑35 (MQ=255) aaaaccCCAGCCAGTCGATTGAGCATCaggcggag > 1:10763399‑M1/7‑35 (MQ=255) aTAACGCCAGCCAGTCGATTGAGCATCaggcggag > 1:17001539/1‑35 (MQ=255) aTAACGCCAGCCAGTCGATTGAGCATCaggcggag > 1:12054516/1‑35 (MQ=255) tAACGCCAGCCAGTCGATTGAGCATCaggcggagg > 1:2507008/1‑35 (MQ=255) tAACGCCAGCCAGTCGATTGAGCATCaggcggagg > 1:13129128/1‑35 (MQ=255) acccCCAGCCAGTCGATTGAGCATCaggcggaggc > 1:1979475‑M1/5‑35 (MQ=255) acccCCAGCCAGTCGATTGAGCATCaggcggaggc > 1:4612409‑M1/5‑35 (MQ=255) cccCCAGCCAGTCGATTGAGCATCaggcggaggcg > 1:5882290‑M1/4‑35 (MQ=255) aCGCCAGCCAGTCGATTGAGCATCaggcggaggcg > 1:14121902/1‑35 (MQ=255) cGCCAGCCAGTCGATTGAGCATCaggcggcggcgg > 1:4211882/1‑35 (MQ=255) cGCCAGCCAGTCGATTGAGCATCaggcggaggcgg > 1:16942996/1‑35 (MQ=255) gccagccaGTCGATTGAGCATCaggcggaggcggg > 1:18647038/1‑34 (MQ=255) gccagccaGTCGATTGAGCATCAGGCGGAGGCGGt < 1:678174/35‑1 (MQ=255) gccagccaGTCGATTGAGCATCAGGCGGAGGCGGt < 1:9367090/35‑1 (MQ=255) cCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGt > 1:18224127‑M1/2‑35 (MQ=255) CCAGCCAGTCGATTGAGCAtcaggcggaggcgggg < 1:8915560‑M1/35‑3 (MQ=255) CCAGCCAGTCGATTGAGCAtcaggcggaggcgggg < 1:13167774‑M1/35‑3 (MQ=255) CCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTg > 1:6595998‑M1/1‑35 (MQ=255) CCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTg > 1:2757921‑M1/1‑35 (MQ=255) | GCCATTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTG > REL606/312835‑312903 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |