New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 9904112 (1.090)9 (0.100) 5/42 NT 11.5% intergenic (+13/+22) mogA/yaaH molybdenum cofactor biosynthesis protein/conserved inner membrane protein associated with acetate transport
?REL606 4001993 = 40 (0.440)intergenic (+10/‑32) tatC/tatD TatABCE protein translocation system subunit/DNase, magnesium‑dependent

Only 100 of 201 total aligned reads displayed.

AAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTCA  >  REL606/9870‑9938
                                  |                                  
aaGACGCGACGTTAGCGAATAAAAAAATCCCTCCG                                    >  1:5978324‑M1/1‑35 (MQ=255)
 aGACGCGACGTTAGCGAATAAAAAAATCCCCCCGa                                   >  1:4186057/1‑35 (MQ=255)
 aGACGCGACGTTAGCGAATAAAAAAATCCCCCCGa                                   <  1:16555956/35‑1 (MQ=255)
 aGACGCGACGTTAGCGAATAAAAAAATCCCCCCGa                                   <  1:6072374/35‑1 (MQ=255)
 aGACGCGACGTTAGCGAATAAAAAAATCCACCCGa                                   <  1:13093501/35‑1 (MQ=255)
  gACGCGACGTTAGCGAATAAAAAAATCCCCCCGAg                                  <  1:17417379/35‑1 (MQ=255)
   aCGCGACGTTAGCGAATAAAAAAATCCCCCCGAGc                                 <  1:15952393/35‑1 (MQ=255)
   aCGCGACGTTAGCGAATAAAAAAATCCCCCCGAGc                                 <  1:14414747/35‑1 (MQ=255)
    cgcgACGTTAGCGAATAAAAAAATCCCCCCGAGCg                                >  1:20020440/1‑35 (MQ=255)
     gcgACGTTAGCGAATAAAAAAATCCCCCCGAGCgg                               >  1:3765187/1‑35 (MQ=255)
     gcgACGTTAGCGAATAAAAAAATCCCCCCGAGCgg                               >  1:4865/1‑35 (MQ=255)
     gcgACGTTAGCGAATAAAAAAATCCCCCCGAGCgg                               >  1:12242551/1‑35 (MQ=255)
       gACGTTAGCGAATAAAAAAATCCCCCCGAGCgggg                             >  1:18269575/1‑35 (MQ=255)
       gACGTTAGCGAATAAAAAAATCCCCCCGAGCgggg                             <  1:17155308/35‑1 (MQ=255)
       gACGTTAGCGAATAAAAAAATCCCCCCGAGCgggg                             >  1:6458885/1‑35 (MQ=255)
        aCGTTAGCGAATAAAAAAATCCCCCCGAGCggggg                            >  1:17731138/1‑35 (MQ=255)
        aCGTTAGCGAATAAAAAAATCCCCCCGAGCggggg                            >  1:9173092/1‑35 (MQ=255)
        aCGTTAGCGAATAAAAAAATCCCCCCAAGCggggg                            >  1:16703965/1‑35 (MQ=255)
          gTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGa                          <  1:14692595/35‑1 (MQ=255)
          gTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGa                          >  1:6977793/1‑35 (MQ=255)
           ttAGCGAATAAAAAAATCCCCCCGAGCGGGGGGAt                         <  1:17033321/35‑1 (MQ=255)
           ttAGCGAATAAAAAAATCCCCCCGAGCGGGGGGAt                         <  1:20189688/35‑1 (MQ=255)
            tAGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtc                        <  1:3483711/35‑1 (MQ=255)
            tAGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtc                        >  1:1492321/1‑35 (MQ=255)
            tAGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtc                        >  1:13272189/1‑35 (MQ=255)
             aGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtct                       <  1:7852237/35‑1 (MQ=255)
             aGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtct                       <  1:20428870/35‑1 (MQ=255)
             aGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtct                       <  1:9808305/35‑1 (MQ=255)
             aGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtct                       <  1:19061486/35‑1 (MQ=255)
             aGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtct                       <  1:18787298/35‑1 (MQ=255)
             aGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtct                       <  1:6480802/35‑1 (MQ=255)
              gCGAATAAAAAAATCCCCCCGAGCTGGGGGAtctc                      >  1:18383514/1‑35 (MQ=255)
              gCGAATAAAAAAATCCCCCCGAGCGGGGGGAtctc                      >  1:2434816/1‑35 (MQ=255)
              gCGAATAAAAAAATCCCCCCGAGCGGGGGGAtctc                      <  1:18167621/35‑1 (MQ=255)
              gCGAATAAAAAAATCCCCCCGAGCGGGGGGAtctc                      >  1:14204917/1‑35 (MQ=255)
               cGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCa                     <  1:1127225/35‑1 (MQ=255)
               cGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCa                     <  1:15188723/35‑1 (MQ=255)
               cGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCa                     >  1:14968017/1‑35 (MQ=255)
                gAATAAAAAAATCCCCCCGAGCGGGGGGATCTCaa                    <  1:6895415/35‑1 (MQ=255)
                gAATAAAAAAATCCCCCCGAGCGGGGGGATCTCaa                    >  1:9462806/1‑35 (MQ=255)
                 aaTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaa                   <  1:17736269/35‑1 (MQ=255)
                 aaTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaa                   >  1:8183378/1‑35 (MQ=255)
                 aaTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaa                   <  1:1481550/35‑1 (MQ=255)
                 aaTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaa                   >  1:7163823/1‑35 (MQ=255)
                 aaTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaa                   <  1:1952114/35‑1 (MQ=255)
                  aTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaaa                  <  1:20421722/35‑1 (MQ=255)
                  aTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaaa                  <  1:8235908/35‑1 (MQ=255)
                  aTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaaa                  >  1:8550817/1‑35 (MQ=255)
                  aTAAAAAAATCCCCCCGAGCGGGGGGATCTCaaaa                  <  1:7727621/35‑1 (MQ=255)
                   tAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAAc                 >  1:13798476/1‑35 (MQ=255)
                    aaaaaaaTCCCCCCGcccgtcagggcggttgtcat                <  1:5907627‑M1/35‑21 (MQ=255)
                    aaaaaaaTCCCCCCGAGCGGGGGGATCTCAAAACa                <  1:7603611/35‑1 (MQ=255)
                    aaaaaaaTCCCCCCGAGCGGGGGGATCTCAAAACa                <  1:4092722/35‑1 (MQ=255)
                    aaaaaaaTCCACCCGcccgtcagggcggttgtcat                <  1:10391100‑M1/35‑21 (MQ=255)
                     aaaaaaTCCCCCCGAGCGGGGGGATCTCAAAACaa               >  1:7486250/1‑35 (MQ=255)
                     aaaaaaTCCCCCCGAGCGGGGGGATCTCAAAACaa               >  1:11025780/1‑35 (MQ=255)
                     aaaaaaTCCCCCCGAGCGGGGGGATCTCAAAACaa               >  1:8972050/1‑35 (MQ=255)
                      aaaaaTCCCCCCGAGCGGGGGGATCTCAAAACAAt              >  1:5722446/1‑35 (MQ=255)
                      aaaaaTCCCCCCGAGCGGGGGGATCTCAAAACAAt              >  1:11553337/1‑35 (MQ=255)
                      aaaaaTCCCCCCGAGCGGGGGGATCTCAAAACAAt              <  1:64309/35‑1 (MQ=255)
                       caaatCCCCCCGcccgtcagggcggttgtcatatg             <  1:20251378‑M1/34‑24 (MQ=255)
                       aaaaTCCCCCCGAGCGGGGGGATCTCAAAACAAtt             >  1:12935851/1‑35 (MQ=255)
                       aaaaTCCACCCGcccgtcagggcggttgtcatatg             <  1:2063598‑M1/35‑24 (MQ=255)
                        aaaTCCCCCCGAGCGGGGGGATCTCAAAACAATTa            >  1:9905422/1‑35 (MQ=255)
                        aaaTCCCCCCGAGCGGGGGGATCTCAAAACAATTa            >  1:10645503/1‑35 (MQ=255)
                        aaaTCCCCCCGAGCGGGGGGATCTCAAAACAATTa            >  1:17284613/1‑35 (MQ=255)
                        aaaTCCACCCGcccgtcagggcggttgtcatatgg            <  1:16888636‑M1/35‑25 (MQ=255)
                         aaTCCCCCCGAGCGGGGGGATCTCAAAACAATTAg           >  1:3697471/1‑35 (MQ=255)
                         aaTCCCCCCGAGCGGGGGGATCTCAAAACAATTAg           >  1:15422963/1‑35 (MQ=255)
                          aTCCCCCCGcccgtcagggcggttgtcatatggag          <  1:10981631‑M1/35‑27 (MQ=255)
                          aTCCCCCCGAGCGGGGGGATCTCAAAACAATTAGt          >  1:10240874/1‑35 (MQ=255)
                          aTCCCCCCGAGCGGGGGGATCTCAAAACAATTAGt          <  1:907247/35‑1 (MQ=255)
                          aTCCCCCCGAGCGGGGGGATCTCAAAACAATTAGt          >  1:3027811/1‑35 (MQ=255)
                          aTCCACCCGcccgtcagggcggttgtcatatggag          <  1:17899403‑M1/35‑27 (MQ=255)
                           tCCCCCCGcccgtcagggcggttgtcatatggagt         <  1:16254958‑M1/35‑28 (MQ=255)
                           tCCACCCGcccgtcagggcggttgtcatatggagt         <  1:19881034‑M1/35‑28 (MQ=255)
                            ccccccGAGCGGGGGGATCTCAAAACAATTAGTgg        >  1:3076954/1‑35 (MQ=255)
                            ccccccGAGCGGGGGGATCTCAAAACAATTAGTgg        >  1:2081854/1‑35 (MQ=255)
                             cccccGAGCGGGGGGATCTCAAAACAATTAGTggg       <  1:8918146/35‑1 (MQ=255)
                             cccccGAGCGGGGGGATCTCAAAACAATTAGTggg       >  1:16034800/1‑35 (MQ=255)
                             cccccGAGCGGGGGGATCTCAAAACAATTAGTggg       >  1:19644124/1‑35 (MQ=255)
                              tcccgcccgtcagggcggttgtcatatggagtaca      <  1:16689180‑M1/34‑31 (MQ=255)
                              ccccGcccgtcagggcggttgtcatatggagtaca      <  1:5335882‑M1/35‑31 (MQ=255)
                              ccccGAGCGGGGTGATCTCAAAATAATTAGTGGGa      >  1:2162982/1‑35 (MQ=37)
                              ccccGAGCGGGGGGATCTCAAAACAATTAGTGGGa      >  1:19230474/1‑35 (MQ=255)
                               cccGAGCGGGGGGATCTCAAAACAATTAGTGGGAt     >  1:6678723/1‑35 (MQ=255)
                               cccGAGCGGGGGGATCTCAAAACAATTAGTGGGAt     <  1:12080364/35‑1 (MQ=255)
                               cccGAGCGGGGGGATCTCAAAACAATTAGTGGGAt     <  1:17373286/35‑1 (MQ=255)
                                ccgcccgtcagggcggttgtcatatggagtacagg    <  1:7377565‑M1/35‑33 (MQ=255)
                                ccGAGCGGGGGGATCTCAAAACAATTAGTGGGAtt    <  1:18346697/35‑1 (MQ=255)
                                ccGAGCGGGGGGATCTCAAAACAATTAGTGGGAtt    <  1:4686565/35‑1 (MQ=255)
                                ccGAGCGGGGGGATCTCAAAACAATTAGTGGGAtt    <  1:11744448/35‑1 (MQ=255)
                                 cGAGCGGGGGGATCTCAAAACAATTAGTGGGATTc   >  1:16641335/1‑35 (MQ=255)
                                  gcccgtcagggcggttgtcatatggagtacaggat  <  1:14523210‑M1/35‑35 (MQ=255)
                                  gAGCGTGGGGATCTCAAAACAATTAGTGGGATTCa  >  1:11644810/1‑35 (MQ=255)
                                  gAGCGGGGGGATCTCAACACAATTAGTGGGATTCa  >  1:12745805/1‑35 (MQ=255)
                                  gAGCGGGGGGATCTCAAAACAATTAGTGGGATTCa  >  1:20333406/1‑35 (MQ=255)
                                  gAGCGGGGGGATCTCAAAACAATTAGTGGGATTCa  >  1:16382084/1‑35 (MQ=255)
                                  gAGCGGGGGGATCTCAAAACAATTAGTGGGATTCa  <  1:4599053/35‑1 (MQ=255)
                                  gAGCGGGGGGATCTCAAAACAATTAGTGGGATTCa  <  1:17571107/35‑1 (MQ=255)
                                  |                                  
AAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTCA  >  REL606/9870‑9938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.