Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 2,122,426 IS150 (–) +3 bp 46.2% coding (198‑200/216 nt) ECB_02013 ← conserved hypothetical protein; putative exported protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2122426 =47 (0.520)48 (0.470) 32/48 NT 47.2% coding (200/216 nt) ECB_02013 conserved hypothetical protein; putative exported protein
?REL606 = 2775877 NA (NA)noncoding (1/1443 nt) IS150 repeat region
* ? REL606 = 212242846 (0.540)32 (0.320) 21/46 NT 37.7% coding (198/216 nt) ECB_02013 conserved hypothetical protein; putative exported protein
?REL606 2774435 = NA (NA)noncoding (1443/1443 nt) IS150 repeat region

Only 100 of 104 total aligned reads displayed.

TGCATAAAAAAATAAGCCCGTGTAAGGGATATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2122459‑2122426
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGG  <  REL606/2775877‑2775844
                                                                    
TGCATAAAAAAATAAGCCCGTGTAAGGGATATTTT                                   >  1:17146471/1‑35
 GCATAAAAAAATAAGCCCGTGTAAGGGATATTTTG                                  <  1:19370217/35‑1
  CATAAAAAAATAAGCCCGTGTAAGGGATATTTTGT                                 >  1:8571156/1‑35
  CATAAAAAAATAAGCCCGTGTAAGGGATATTTTGT                                 <  1:2530114/35‑1
  CATAAAAAAATAAGCCCGTGTAAGGGATATTTTGT                                 >  1:5415087/1‑35
   ATAAAAAAATAAGCCCGTGTAAGGGATATTTTGTA                                <  1:2038723/35‑1
   ATAAAAAAATAAGCCCGTGTAAGGGATATTTTGTA                                <  1:7331156/35‑1
    TAAAAAAATAAGCCCGTGTAAGGGATATTTTGTAC                               <  1:19782025/35‑1
    TAAAAAAATAAGCCCGTGTAAGGGATATTTTGTAC                               <  1:12191812/35‑1
     AAAAAAATAAGCCCGTGTAAGGGATATTTTGTACT                              <  1:10829087/35‑1
     AAAAAAATAAGCCCGTGTAAGGGATATTTTGTACT                              <  1:3841350/35‑1
      AAAAAATAAGCCCGTGTAAGGGATATTTTGTACTG                             <  1:256627/35‑1
       AAAAATAAGCCCGTGTAAGGGATATTTTGTACTGC                            <  1:19115386/35‑1
       AAAAATAAGCCCGTGTAAGGGATATTTTGTACTGC                            >  1:15954482/1‑35
       AAAAATAAGCCCGTGTAAGGGATATTTTGTACTGC                            <  1:13431634/35‑1
       AAAAATAAGCCCGTGTAAGGGATATTTTGTACTGC                            >  1:10121850/1‑35
        AAAATAAGCCCGTGTAAGGGATATTTTGTACTGCA                           >  1:12128975/1‑35
        AAAATAAGCCCGTGTAAGGGATATTTTGTACTGCA                           <  1:15873634/35‑1
         AAATAAGCCCGTGTAAGGGATATTTTGTACTGCAC                          >  1:131535/1‑35
         AAATAAGCCCGTGTAAGGGATATTTTGTACTGCAC                          <  1:3732648/35‑1
         AAATAAGCCCGTGTAAGGGATATTTTGTACTGCAC                          <  1:15274977/35‑1
         AAATAAGCCCGTGTAAGGGATATTTTGTACTGCAC                          <  1:18307470/35‑1
          AATAAGCCCGTGTAAGGGATATTTTGTACTGCACC                         <  1:14204875/35‑1
           ATAAGCCCGTGTAAGGGATATTTTGTACTGCACCC                        <  1:9238744/35‑1
           ATAAGCCCGTGTAAGGGATATTTTGTACTGCACCC                        >  1:8132944/1‑35
           ATAAGCCCGTGTAAGGGATATTTTGTACTGCACCC                        <  1:7800319/35‑1
           ATAAGCCCGTGTAAGGGATATTTTGTACTGCACCC                        <  1:3126793/35‑1
            TAAGCCCGTGTAAGGGATATTTTGTACTGCACCCA                       >  1:20238126/1‑35
            TAAGCCCGTGTAAGGGATATTTTGTACTGCACCCA                       >  1:8599023/1‑35
            TAAGCCCGTGTAAGGGATATTTTGTACTGCACCCA                       >  1:13003551/1‑35
            TAAGCCCGTGTAAGGGATATTTTGTACTGCACCCA                       >  1:3757594/1‑35
             AAGCCCGTGTAAGGGATATTTTGTACTGCACCCAT                      <  1:3301895/35‑1
             AAGCCCGTGTAAGGGATATTTTGTACTGCACCCAT                      >  1:8665799/1‑35
              AGCCCGTGTAAGGGATATTTTGTACTGCACCCATT                     >  1:5495212/1‑35
              AGCCCGTGTAAGGGATATTTTGTACTGCACCCATT                     <  1:12166102/35‑1
                CCCGTGTAAGGGATATTTTGTACTGCACCCATTTT                   >  1:6991668/1‑35
                CCCGTGTAAGGGATATTTTGTACTGCACCCATTTT                   <  1:5485625/35‑1
                 CCGTGTAAGGGATATTTTGTACTGCACCCATTTTG                  >  1:20556830/1‑35
                  CGTGTAAGGGGTATTTTGTACTGCACCCATTTTGT                 >  1:9599123/1‑35
                  CGTGTAAGGGATATTTTGTACTGCACTCATTTTGT                 <  1:2771609/35‑1
                  CGTGTAAGGGATATTTTGTACTGCACCCATTTTGT                 <  1:5231344/35‑1
                  CGTGTAAGGGATATTTTGTACTGCACCCATTTTGT                 >  1:5387713/1‑35
                  CGTGTAAGGGATATTTTGTACTGCACCCATTTTGT                 <  1:6613535/35‑1
                   GTGTAAGGGATATTTTGTACTGCACCCATTTTGTT                >  1:18627185/1‑35
                   GTGTAAGGGATATTTTGTACTGCACCCATTTTGTT                >  1:13903239/1‑35
                    TGTAAGGGATATTTTGTACTGCACCCATTTTGTTG               >  1:5645837/1‑35
                      TAAGGGATATTTTGTACTGCACCCATTTTGTTGGA             >  1:1707970/1‑35
                      TAAGGGATATTTTGTACTGCACCCATTTTGTTGGA             <  1:11343143/35‑1
                       AAGGGATATTTTGTACTGCACCCATTTTGTTGGAC            >  1:3620244/1‑35
                        AGGGATATTTTGTACTGCACCCATTTTTTTGGACG           >  1:18353084/1‑35
                        AGGGATATTTTGTACTGCACCCATTTTGTTGGACG           >  1:4595473/1‑35
                         GGGATATTTTGTACTGCACCCATTTTGTTGGACGA          >  1:3099599/1‑35
                           GATATTTTGTACTGCACCCATTTTGTTGGACGATG        <  1:10396351/35‑1
                            ATATTTTGTACTGCACCCATTTTGTTGGACGATGA       >  1:5725202/1‑35
                            ATATTTTGTACTGCACCCATTTTGTTGGACGATGA       >  1:8071808/1‑35
                              cacTTGTACTGCACCCATTTTGTTGGACGATGAAA     <  1:11956294/32‑1
                              cacTTGTACTGCACCCATTTTGTTGGACGATGAAA     >  1:14357348/4‑35
                              cacTTGTACTGCACCCATTTTGTTGGACGATGAAA     <  1:20444139/32‑1
                              ATTTTGTACTGCACCCATTTTGTTGGACGATGAAA     >  1:184065/1‑35
                               TTTTGTACTGCACCCATTTTGTTGGACGATGAAAT    <  1:16426135/35‑1
                               TTTTGTACTGCACCCATTTTGTTGGACGATGAAAT    <  1:2540407/35‑1
                               TTTTGTACTGCACCCATTTTGTTGGACGATGAAAT    <  1:8538996/35‑1
                               TTTTGTACTGCACCCATTTTGTTGGACGATGAAAT    <  1:8175373/35‑1
                                TTTGTACTGCACCCATTTTGTTGGACGATGAAATG   >  1:6579365/1‑35
                                TTTGTACTGCACCCATTTTGTTGGACGATGAAATG   <  1:7576231/35‑1
                                TTTGTACTGCACCCATTTTGTTGGACGATGAAATG   >  1:11805205/1‑35
                                TTTGTACTGCACCCATTTTGTTGGACGATGAAATG   <  1:11499761/35‑1
                                TTTGTACTGCACCCATTTTGTTGGACGATGAAATG   <  1:5037367/35‑1
                                TTTGTACTGCACCCATTTTGTTGGACGATGAAATG   >  1:3719702/1‑35
                                TTTGTACTGCACCCATTTTGTTGGACGATGAAATG   <  1:18702934/35‑1
                                TTTGTACTGCACCCATTTTGTTGGACGATGAAATG   <  1:19212099/35‑1
                                TTTGTACTGCACCCATTTTGTTGGACGATGAAATG   <  1:20218412/35‑1
                                TTTGTACTGCACCCATTTTGTTGGACGATGAAATG   <  1:16623817/35‑1
                                TTTGTACTGCACCCATTTTGTTGGACGATGAAATG   <  1:18255585/35‑1
                                TTTGTACTGCACCCATTTTGTTGGACGATGAAATG   >  1:18223986/1‑35
                                TTTGTACTGCACCCATTTTGTTGGAAGATGAAATG   <  1:1241813/35‑1
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  <  1:10034006/35‑1
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:9554216/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:10373817/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  <  1:9137140/35‑1
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:8561100/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  <  1:9081863/35‑1
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:8987886/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:8577451/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  <  1:11285063/35‑1
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  <  1:8847715/35‑1
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:6977819/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  <  1:6614098/35‑1
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:6329413/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:12499555/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  <  1:12863753/35‑1
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:5362827/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:13161910/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:16159723/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:3228716/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  <  1:2430416/35‑1
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  >  1:18488119/1‑35
                                 TTGTACTGCACCCATTTTGTTGGACGATGAAATGG  <  1:18500081/35‑1
                                 TTGTACTGCACACATTTTGTTGGACGATGAAATGG  <  1:16948365/35‑1
                                 TTGTACCGCACCCATTTTGTTGGACGATGAAATGG  >  1:12573756/1‑35
                                                                    
TGCATAAAAAAATAAGCCCGTGTAAGGGATATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2122459‑2122426
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGG  <  REL606/2775877‑2775844

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.