New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 929308 = | 57 (0.550) | 8 (0.120) | 3/32 | NT | 13.8% | coding (1214/1653 nt) | hcp | hydroxylamine reductase |
? | REL606 | = 3040633 | 62 (0.910) | coding (654/810 nt) | pppA | bifunctional prepilin leader peptidase/ methylase |
GAGCCGTGAAAAACTGCGTCATATCTTCCTGCTTGGTGGCTG‑‑‑‑‑‑‑‑‑ < REL606/929349‑929308 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggctgGGTGGGGGC < REL606/3040633‑3040625 GAGCCGTGAAAAACTGCGTCATATCTTCCTGCTTG < 1:8697032/35‑1 GAGCCGTGAAAAACTGCGTCATATCTTCCTGCTTG < 1:14019631/35‑1 GAGCCGTGAAAAACTGCGTCATATCTTCCTGCTTG > 1:3531434/1‑35 GAGCCGTGAAAAAATGCGTCATATCTTCCTGCTTG < 1:13216269/35‑1 AGCCGTGAAAAACTGCGTCATATCTTCCTGCTTGG > 1:2389808/1‑35 AGCCGTGAAAAACTGCGTCATATCTTCCTGCTTGG > 1:14087547/1‑35 GCCGTGAAAAACTGCGTCATATCTTCCTGCTTGGT > 1:16499845/1‑35 GCCGTGAAAAACTGCGTCATATCTTCCTGCTTGGT < 1:10822863/35‑1 GCCGTGAAAAACTGCGTCATATCTTCCTGCTTGGT < 1:8690465/35‑1 GCCGTGAAAAACTGCGTCATATCTTCCTGCTTGGT < 1:7224239/35‑1 GCCGTGAAAAACTGCGTCATATCTTCCTGCTTGGT > 1:4897007/1‑35 CCGTGAAAAACTGCGTCATATCTTCCTGCTTGGTG > 1:6015423/1‑35 CCGTGAAAAACTGCGTCATATCTTCCTGCTTGGTG > 1:19391699/1‑35 CCGTGAAAAACTGCGTCATATCTTCCTGCTTGGTG > 1:1230972/1‑35 CCGTGAAAAACTGCGTCATATCTTCCTGCTTGGTG < 1:4476695/35‑1 CCGTGAAAAACTGCGTCATATCTTCCTGCTTGGTG > 1:19258832/1‑35 CGTGAAAAACTGCGTCATATCTTCCTGCTTGGTGG < 1:297935/35‑1 CGTGAAAAACTGCGTCATATCTTCCTGCTTGGTGG > 1:6663183/1‑35 CGTGAAAAACTGCGTCATATCTTCCTGCTTGGTGG > 1:12473451/1‑35 CGTGAAAAACTGCGTCATATCTTCCTGCTTGGTGG < 1:10144659/35‑1 CGTGAAAAACTGCGTCATATCTTCCTGCTTGGTGG > 1:907023/1‑35 CGTGAAAAACTGCGTCATATCTTCCTGCTTGGTGG > 1:5998528/1‑35 GTGAAAAACTGCGTCATATCTTCCTGCTTGGTGGC > 1:3899563/1‑35 GTGAAAAACTGCGTCATATCTTCCTGCTTGGTGGC > 1:16149748/1‑35 GTGAAAAACTGCGTCATATCTTCCTGCTTGGTGGC > 1:63378/1‑35 GTGAAAAACTGCGTCATATCTTCCTGCTTGGTGGC < 1:6674472/35‑1 TGAAAAACTGCGTCATATCTTCCTGCTTGGTGGCT < 1:1593351/35‑1 TGAAAAACTGCGTCATATCTTCCTGCTTGGTGGCT < 1:15287975/35‑1 TGAAAAACTGCGTCATATCTTCCTGCTTGGTGGCT > 1:366577/1‑35 TGAAAAACTGCGTCATATCTTCCTGCTTGGTGGCT < 1:17256731/35‑1 TGAAAAACTGCGTCATATCTTCCTGCTTGGTGGCT > 1:13097824/1‑35 TGAAAAACTGCGTCATATCTTCCTGCTTGGTGGCT > 1:11053098/1‑35 GAAAAACTGCGTCATATCTTCCTGCTTGGTGGCTG > 1:2985392/1‑35 GAAAAACTGCGTCATATCTTCCTGCTTGGTGGCTG < 1:4516807/35‑1 GAAAAACTGCGTCATATCTTCCTGCTTGGTGGCTG < 1:17668492/35‑1 GAAAAACTGCGTCATATCTTCCTGCTTGGTGGCTG > 1:5555284/1‑35 GAAAAACTGCGTCATATCTTCCTGCTTGGTGGCTG < 1:16079966/35‑1 GAAAAACTGCGTCATATCTTCCTGCTTGGTGGCTG < 1:13356973/35‑1 GAAAAACTGCGTCATATCTTCCTGCTTGGTGGCTG > 1:13162233/1‑35 GAAAAACTGCGTCATATCTTCCTGCTTGGTGGCTG < 1:9423549/35‑1 AAAAACTGCGTCATATCTTCCTGCTTGGTGGCTGG > 1:1005664/1‑35 AAAAACTGCGTCATATCTTCCTGCTTGGTGGCTGG > 1:12961045/1‑35 AAAACTGCGTCATATCTTCCTGCTTGGTGGCTGGG > 1:6610857/1‑35 AAAACTGCGTCATATCTTCCTGCTTGGTGGCTGGG > 1:16795657/1‑35 AAAACTGCGTCATATCTTCCTGCTTGGTGGCTGGG > 1:17370305/1‑35 AAACTGCGTCATATCTTCCTGCTTGGTGGCTGGGg > 1:13517933/1‑34 AACTGCGTCATATCTTCCTGCTTGGTGGCTGGGgg > 1:13805929/1‑33 AACTGCGTCATATCTTCCTGCTTGGTGGCTGGGgg > 1:10921807/1‑33 ACTGCGTCATATCTTCCTGCTTGGTGGCTGGGgcg > 1:16149109/1‑32 ACTGCGTCATATCTTCCTGCTTGGTGGCTGGGgag > 1:7910823/1‑32 ACTGCGTCATATCTTCCTGCTTGGTGGCTGGGGGG > 1:20538303/1‑35 ACTGCGTCATATCTTCCTGCTTGGTGGCTGGGGGG > 1:2863724/1‑35 TGCGTCATATCTTCCTGCTTGGTGGCTGGGGGGGG > 1:18643903/1‑35 TGCGTCATATCTTCCTGCTTGGTGGCTGGGGGGGG > 1:1932291/1‑35 TGCGTCATATCTTCCTGCTTGGTGGCTGGGGGGGG > 1:12978814/1‑35 TGCGTCATATCTTCCTGCTTGGTGGCTGGGGGGGG > 1:12064066/1‑35 GCGTCATATCTTCCTGCTTGGTGGCTGGGGGGGGG > 1:1236225/1‑35 GCGTCATATCTTCCTGCTTGGTGGCTGGGGGGGGG > 1:10088027/1‑35 CGTCATATCTTCCTGCTTGGTGGCTGGGGGGGGGC > 1:18405914/1‑35 CGTCATATCTTCCTGCTTGGTGGCTGGGGGGGGGC > 1:6659227/1‑35 GAGCCGTGAAAAACTGCGTCATATCTTCCTGCTTGGTGGCTG‑‑‑‑‑‑‑‑‑ < REL606/929349‑929308 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggctgGGTGGGGGC < REL606/3040633‑3040625 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |