New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1495445 = | 79 (0.770) | 10 (0.110) | 4/44 | NT | 13.0% | coding (648/1500 nt) | ansP | L‑asparagine transporter |
? | REL606 | 3277263 = | 61 (0.650) | coding (763/987 nt) | yrbH | D‑arabinose 5‑phosphate isomerase |
Only 100 of 135 total aligned reads displayed.
CGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGCGT > REL606/3277229‑3277297 | cGATGACAATATGATGATTGAAGGCATCTTTACCg < 1:17763689/35‑1 (MQ=255) cGATGACAATATGATGATTGAAGGCATCTTTACCg < 1:15776499/35‑1 (MQ=255) cGATGACAATATGATGATTGAAGGCATCTTTACCg > 1:2844694/1‑35 (MQ=255) cGATGACAATATGATGATTGAAGGCATCTTTACCg < 1:3365638/35‑1 (MQ=255) cGATGACAATATGATGATTGAAGGCATCTTTACCg > 1:14072790/1‑35 (MQ=255) cGATGACAATATGATGATTGAAGGCATCTTTACCg > 1:405550/1‑35 (MQ=255) cGATGACAATATGATGATTGAAGGCATCTTTACCg < 1:6739692/35‑1 (MQ=255) gATGACAATATGATGATTGAAGGCATCTTTACCGa > 1:9449015/1‑35 (MQ=255) aTGACAATATGATGATTGAAGGCATCTTTACCGAc > 1:670441/1‑35 (MQ=255) aTGACAATATGATGATTGAAGGCATCTTTACCGAc > 1:13488733/1‑35 (MQ=255) aTGACAATATGATGATTGAAGGCATCTTTACCGAc > 1:9624029/1‑35 (MQ=255) tGACAATATGATGATTGAAGGCATCTTTACCGACg > 1:15799272/1‑35 (MQ=255) tGACAATATGATGATTGAAGGCATCTTTACCGACg > 1:8568157/1‑35 (MQ=255) tGACAATATGATGATTGAAGGCATCTTTACCGACg > 1:10533391/1‑35 (MQ=255) tGACAATATGATGATTGAAGGCATCTTTACCGACg > 1:3677283/1‑35 (MQ=255) tGACAATATGATGATTGAAGGCATCTTTACCGACg > 1:13692635/1‑35 (MQ=255) gACAATATGATGATTGAAGGCATCTTTACCGACgg < 1:15442151/35‑1 (MQ=255) aCAATATGATGATTGAAGGCATCTTTACCGACggg > 1:20295024/1‑34 (MQ=255) aCAATATGATGATTGAAGGCATCTTTACCGACggg > 1:9806884/1‑34 (MQ=255) aCAATATGATGATTGAAGGCATCTTTACCGACGGt > 1:5364629/1‑35 (MQ=255) cAATATGATGATTGAAGGCATCTTTACCGACgggg > 1:1979823/1‑33 (MQ=255) cAATATGATGATTGAAGGCATCTTTACCGACgggg > 1:16243708/1‑33 (MQ=255) aaTATGATGATTGAAGGCATCTTTACCGACGGTGa > 1:9920784/1‑35 (MQ=255) aaTATGATGATTGAAGGCATCTTTACCGACGGGGa > 1:2072690/1‑35 (MQ=255) tatGATGATTGAAGGCATCTTTACCGACGGTGAtt > 1:7921496/1‑35 (MQ=255) tatGATGATTGAAGGCATCTTTACCGACGGGGAtt > 1:11166623/1‑35 (MQ=255) tatGATGATTGAAGGCATCTTTACCGACGGGGAtt > 1:11453108/1‑35 (MQ=255) tatGATGATTGAAGGCATCTTTACCGACGGGGAtt > 1:11749146/1‑35 (MQ=255) tatGATGATTGAAGGCATCTTTACCGACGGGGAtt > 1:10503285/1‑35 (MQ=255) atgatgATTGAAGGCATCTTTACCGACGGGGAttt > 1:18194205/1‑35 (MQ=255) tgatgaTTGAAGGCATCTTTACCGACGGGGGTTTa > 1:15892949/1‑35 (MQ=25) tgatgaTTGAAGGCATCTTTACCGACGGGGATTTa > 1:20380140/1‑35 (MQ=255) gatgatTGAAGGCATCTTTACCGACGGTGATTTAc > 1:16902377/1‑35 (MQ=255) atgatTGAAGGCATCTTTACCGACGGGGATTTTCg > 1:6417198/1‑35 (MQ=21) gatTGAAGGCATCTTTCCAGACGGTGATTTACGcc < 1:11237802/35‑1 (MQ=37) gatTGAAGGCATCTTTCCAGACGGTGATTTACGcc < 1:11233966/35‑1 (MQ=37) gatTGAAGGCATCTTTACCGACGGGGATTTACGcc > 1:13159123/1‑35 (MQ=255) gatTGAAGGCATCTTTACCGACGGCGATTTATGcc > 1:19720267/1‑35 (MQ=17) atTGAAGGCATCTTTACCGACGGGGATTTACGCCg > 1:20177667/1‑35 (MQ=255) atTGAAGGCATCTTTACCGACGGGGATTTACGCCg > 1:1604201/1‑35 (MQ=255) atTGAAGGCATCTTTACCGACGGGGATTTACGCCg > 1:9320528/1‑35 (MQ=255) atTGAAGGCATCTTTACCGACGGGGATTTACGCCg > 1:13748058/1‑35 (MQ=255) ttGAAGGCATCTTTCCCGACGGTGATTTACGCCgt < 1:5977732/35‑1 (MQ=255) ttGAAGGCATCTTTACCGACGGTGATTTACGCCgt > 1:2760827/1‑35 (MQ=255) ttGAAGGCATCTTTACCGACGGTGATTTACGCCgt > 1:17772272/1‑35 (MQ=255) ttGAAGGCATCTTTACCGACGGGGATTTACGCCgt > 1:16507411/1‑35 (MQ=255) tGAAGGCATCTTTCCCGACGGTGATTTACGCCgtg < 1:6655859/35‑1 (MQ=255) tGAAGGCATCTTTCCCGACGGTGATTTACGCCgtg < 1:18654725/35‑1 (MQ=255) tGAAGGCATCTTTACCGACGGGGATTTACGCCttg > 1:14351943/1‑35 (MQ=18) tGAAGGCATCTTTACCGACGGGGATTTACGCCgtg > 1:4958262/1‑35 (MQ=255) gAAGGCATCTTTACCGACGGTGATTTACGCCgtgt > 1:820418/1‑35 (MQ=255) gAAGGCATCTTTACCGACGGGGATTTACGCCgtgt > 1:7763028/1‑35 (MQ=255) aaGGCATCTTTCCCGACGGTGATTTACGCCGTGTc < 1:13020776/35‑1 (MQ=255) aaGGCATCTTTCCCGACGGTGATTTACGCCGTGTc < 1:18939822/35‑1 (MQ=255) aaGGCATCTTTACCGACGGTGATTTACGCCGTGTc > 1:15306661/1‑35 (MQ=255) aaGGCATCTTTACCGACGGGGATTTACGCCGTGTc > 1:1643026/1‑35 (MQ=255) aaGGCATCTTTACCGACGGGGATTTACCCCgtgtg > 1:6401893/1‑34 (MQ=18) cggcttcttccccGACGGTGATTTACGCCGTGTCt < 1:20593172‑M2/22‑1 (MQ=255) aggcttcttccccGACGGTGATTTACGCCGTGTCt < 1:4288075‑M2/22‑1 (MQ=255) aGGCATCTTTACCGACGGTGATTTACGCCGTGTCt > 1:17405772/1‑35 (MQ=255) aGGCATCTTTACCGACGGTGATTTACGCCGTGTCt > 1:10679773/1‑35 (MQ=255) aGGCATCTTTACCGACGGGGATTTACGCCGTGTCt > 1:1492853/1‑35 (MQ=255) ggCATCTTTCCCGACGGTGATTTACGCCGTGTCtt < 1:13215994/35‑1 (MQ=255) ggCATCTTTCCCGACGGTGATTTACGCCGTGTCtt < 1:6132289/35‑1 (MQ=255) gccATCTTTCCCGACGGTGATTTACGCCGTGTCtt < 1:15142932/33‑1 (MQ=38) gcttcttccccGACGGTGATTTACGCCGTGTCTTc < 1:2690099‑M2/24‑1 (MQ=255) gcctCTTTCCCGACGGTGATTTACGCCGTGTCTTc < 1:10662519/32‑1 (MQ=37) gCATCTTTACCGACGGTGATTTACGCCGTGTCTTc > 1:5852443/1‑35 (MQ=255) cttcttccccGACGGTGATTTACGCCGTGTCTTCg < 1:8514444‑M2/25‑1 (MQ=255) cttcttccccGACGGTGATTTACGCCGTGTCTTCg < 1:7029678‑M2/25‑1 (MQ=255) ttcttccccGACGGTGATTTACGCCGTGTCTTCGa < 1:944810‑M2/26‑1 (MQ=255) aTCTTTACCGACGGTGATTTACGCCGTGTCTTCGa > 1:12285374/1‑35 (MQ=255) tCTTTACCGACGGTGATTTACTCCGTGTCTTCGat > 1:13388724/1‑35 (MQ=255) tCTTTACCGACGGTGATTTACGCCGTGTCTTCgct > 1:9177863/1‑33 (MQ=255) cttccccGACGGTGATTTACGCCGTGTCTTCGata < 1:8244181‑M2/28‑1 (MQ=255) cttccccGACGGTGATTTACGCCGTGTCTTCGata < 1:15063973‑M2/28‑1 (MQ=255) cTTTACCGACGGTGATTTACGCCGTGTCTTCGata > 1:14053383/1‑35 (MQ=255) tttcccGACGGTGATTTACGCCGTGTCTTCGatat < 1:11270761‑M2/29‑1 (MQ=255) tttACCGACGGTGATTTACGCCGTGTCTTCGatat > 1:18700753/1‑35 (MQ=255) ttccccGACGGTGATTTACGCCGTGTCTTCGatat < 1:20022954‑M2/29‑1 (MQ=255) ttACCGACGGGGATTTACGCCGTGTCTTCGATATg > 1:17607894/1‑35 (MQ=255) tccccGACGGTGATTTACGCCGTGTCTTCGATATg < 1:13811692‑M2/30‑1 (MQ=255) tcccGACGGTGATTTACGCCGTGTCTTCGATATgg < 1:11481198‑M2/31‑1 (MQ=255) ccccGACGGTGATTTACGCCGTGTCTTCGATATgg < 1:17056051‑M2/31‑1 (MQ=255) cccGACGGTGATTTACGCCGTGTCTTCGATATggg < 1:14049030‑M2/32‑1 (MQ=255) ccGACGGTGATTTACGCCGTGTCTTCGATATGGGc < 1:7488057‑M2/33‑1 (MQ=255) ccGACGGTGATTTACGCCGTGTCTTCGATATGGGc < 1:5177673‑M2/33‑1 (MQ=255) ccGACGGTGATTTACGCCGTGTCTTCGATATGGGc < 1:9141252‑M2/33‑1 (MQ=255) ccGACGGTGATTTACGCCGTGTCTTCGATATGGGc < 1:20141091‑M2/33‑1 (MQ=255) ccGACGGTGATTTACGCCGTGTCTTCGATATGGGc > 1:1708441‑M2/3‑35 (MQ=255) ccGACGGTGATTTACGCCGTGTCTTCGATATAGGc < 1:15583704‑M2/33‑1 (MQ=255) cGACGGTGATTTACGCCGTGTCTTCGATATGGGCg > 1:4439616‑M2/2‑35 (MQ=255) cGACGGTGATTTACGCCGTGTCTTCGATATGGGCg < 1:14444920‑M2/34‑1 (MQ=255) gACGGTGATTTACGCCGTGTCTTCGATATGGGCgg > 1:1030192/1‑34 (MQ=255) gACGGTGATTTACGCCGTGTCTTCGATATGGGCGt < 1:13203530/35‑1 (MQ=255) gACGGTGATTTACGCCGTGTCTTCGATATGGGCGt > 1:1271246/1‑35 (MQ=255) gACGGTGATTTACGCCGTGTCTTCGATATGGGCGt < 1:8481738/35‑1 (MQ=255) gACGGTGATTTACGCCGTGTCTTCGATATGGGCGt > 1:3047518/1‑35 (MQ=255) gACGGTGATTTACGCCGTGTCTTCGATATGGGCGt > 1:14602332/1‑35 (MQ=255) gACGGTGATTTACGCCGTGTCTTCGATATGGGCGt < 1:20245432/35‑1 (MQ=255) | CGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGCGT > REL606/3277229‑3277297 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |