New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 327441 = | 112 (1.090) | 14 (0.140) | 5/48 | NT | 14.4% | intergenic (+199/‑37) | prpE/codB | predicted propionyl‑CoA synthetase with ATPase domain/cytosine transporter |
? | REL606 | 1238616 = | 54 (0.530) | coding (896/1299 nt) | dadA | D‑amino acid dehydrogenase small subunit |
TGAAACCCAAAAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/327455‑327441 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCGCCATTACCCGTTTCGATAACCGCATTCGTGT > REL606/1238616‑1238649 atAAACCCAAAAAATTCGCCATTACCCGTTTCGAT < 1:993304/33‑1 tAAACCCAAAAAAATCGCCATTACCCGTTTCGATA < 1:10398839/34‑1 AACCCAAAAAATTCGCCATTACCCGTTTCGATAAC < 1:6673431/35‑1 AACCCAAAAAAATCGCCATTACCCGTTTCGATAAC < 1:9947107/35‑1 ACCCAAAAAATTCGCCATTACCCGTTTCGATAACC < 1:17547192/35‑1 ACCCAAAAAATTCGCCATTACCCGTTTCGATAACC < 1:9216358/35‑1 ACCCAAAAAATTCGCCATTACCCGTTTCGATAACC < 1:5918530/35‑1 CCCAAAAAATTCGCCATTACCCGTTTCGATAACCG < 1:18675674/35‑1 CCCAAAAAATTCGCCATTACCCGTTTCGATAACCG < 1:5069163/35‑1 tAAAAATTCGCCATTACCCGTTTCGATAACCGCAT < 1:9143273/34‑1 AAAAAATTCGCCATTACCCGTTTCGATAACCGCAT < 1:3065550/35‑1 AAAAAATTCGCCATTACCCGTTTCGATAACCGCAT < 1:454845/35‑1 AAAAATTCGCCATTACCCGTTTCGATAACCGCATT < 1:2820629/35‑1 AAAAATTCGCCATTACCCGTTTCGATAACCGCATT < 1:11939163/35‑1 AAAATTCGCCATTACCCGTTTCGATAACCGCATTC < 1:16842277/35‑1 AAAATTCGCCATTACCCGTTTCGATAACCGCATTC < 1:5708027/35‑1 AAAATTCGCCATTACCCGTTTCGATAACCGCATTC < 1:13836290/35‑1 AATTCGCCATTACCCGTTTCGATAACCGCATTCGT < 1:11655752/35‑1 AATTCGCCATTACCCGTTTCGATAACCGCATTCGT < 1:6943466/35‑1 ATTCGCCATTACCCGTTTCGATAACCGCATTCGTG < 1:4687762/35‑1 TTCGCCATTACCCGTTTCGATAACCGCATTCGTGT < 1:5522866/35‑1 TTCGCCATTACCCGTTTCGATAACCGCATTCGTGT < 1:17861928/35‑1 TGAAACCCAAAAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/327455‑327441 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCGCCATTACCCGTTTCGATAACCGCATTCGTGT > REL606/1238616‑1238649 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |