New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1979076 | 88 (0.860) | 10 (0.110) | 4/44 | NT | 14.7% | coding (595/636 nt) | yedZ | hypothetical protein |
? | REL606 | = 2901067 | 35 (0.370) | coding (153/579 nt) | ygfJ | hypothetical protein |
TAGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1979041‑1979076 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taGCCGGTGACTAAAATAATTCGGCTACAAAACTGC < REL606/2901067‑2901034 TAGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTT > 1:329468/1‑35 TAGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTT > 1:6605154/1‑35 TAGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTT > 1:19243840/1‑35 TAGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTT > 1:4550901/1‑35 AGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTTA > 1:6783693/1‑35 AGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTTA < 1:12702497/35‑1 AGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTTA > 1:5621301/1‑35 AGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTTA > 1:19211157/1‑35 AGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTTA < 1:15906106/35‑1 AGCCTTACGGTATAAGAAGTTGCGTTCACTTTTTA < 1:16800143/35‑1 tTTCCCTTTTTAGCCGGTGACTAAAATAATTCGGC < 1:8341456/34‑1 tTTCCATTTTTAGCCGGTGACTAAAATAATTCGGC < 1:16202595/34‑1 aTTCCCTTTTTAGCCGGTGACTAAAATAATTCGGC < 1:248279/34‑1 TTCTCTTTTTAGCCGGTGACTAAAATAATTCGGCT < 1:4204236/35‑1 TTCCCTTTTTAGCCGGTGACTAAAATAATTCGGCT < 1:3980888/35‑1 TTCCCTTTTTAGCCGGTGACTAAAATAATTCGGCT < 1:6396260/35‑1 TCCCTTTTTAGCCGGTGACTAAAATAATTCGGCTA < 1:6615575/35‑1 CCCTTTTTAGCCGGTGACTAAAATAATTCGGCTAC < 1:8996305/35‑1 CCCTTTTTAGCCGGTGACTAAAATAATTCGGCTAC < 1:2459916/35‑1 CCTTTTTAGCCGGTGACTAAAATAATTCGGCTACA < 1:4385582/35‑1 ccTTTTAGCCGGTGACTAAAATAATTCGGCTACAA < 1:12824940/33‑1 caTTTTAGCCGGTGACTAAAATAATTCGGCTACAA < 1:4828729/33‑1 CTTTTTAGCCGGTGACTAAAATAATTCGGCTACAA < 1:4818637/35‑1 TTTTTAGCCGGTGACTAAAATAATTCGGCTACAAA < 1:1665787/35‑1 TTTTTAGCCGGTGACTAAAATAATTCGGCTACAAA < 1:1111063/35‑1 cTTTAGCCGGTGACTAAAATAATTCGGCTACAAAA < 1:11713726/34‑1 TTTTAGCCGGTGACTAAAATAATTCGGCTACAAAA < 1:19725020/35‑1 TTTAGCCGGTGACTAAAATAATTCGGCTACAAAAC < 1:14861041/35‑1 TTTAGCCGGTGACTAAAATAATTCGGCTACAAAAC < 1:5579813/35‑1 TAGCCGGTGACTAAAATAATTCGGCTACAAAACTG < 1:15248742/35‑1 TAGCCGGTGACTAAAATAATTCGGCTACAAAACTG < 1:10852697/35‑1 TAGCCGGTGACTAAAATAATTCGGCTACAAAAATG > 1:12255432/1‑35 TAGCCGGTGACTAAAATAATTCGGCTACAAAAATG > 1:14975822/1‑35 AGCCGGTGACTAAAATAATTCGGCTACAAAACTGC > 1:13941183/1‑35 AGCCGGTGACTAAAATAATTCGGCTACAAAACTGC > 1:8967712/1‑35 TAGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1979041‑1979076 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taGCCGGTGACTAAAATAATTCGGCTACAAAACTGC < REL606/2901067‑2901034 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |