New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3820609 = | 84 (0.820) | 7 (0.100) | 3/34 | NT | 12.1% | coding (425/924 nt) | yidL | predicted DNA‑binding transcriptional regulator |
? | REL606 | = 4248913 | 42 (0.580) | coding (568/714 nt) | aphA | acid phosphatase/phosphotransferase, class B, non‑specific |
CAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCA > REL606/4248880‑4248945 | cAATGGCTGCAGGATAAAAATATCCGAATTTTTTa > 1:10258965‑M2/1‑34 (MQ=255) aaTGGCTGCAGGATAAAAATATCCGAATTTTTTat > 1:9767262‑M2/1‑33 (MQ=255) aaTGGCTGCAGGATAAAAATATCCGAATTTTTTat > 1:7770036‑M2/1‑33 (MQ=255) aTTGCTGCAGGATAAAAATATCCGAATTTTTTatg < 1:16605262‑M2/35‑4 (MQ=255) aTGGCTGCAGGATAAAAATATCCGAATTTTTTatg > 1:721411‑M2/1‑32 (MQ=255) aTGGCTGCAGGATAAAAATATCCGAATTTTTTatg > 1:3752440‑M2/1‑32 (MQ=255) aTGGCTGCAGGATAAAAATATCCGAATTTTTTatg > 1:1594552‑M2/1‑32 (MQ=255) aTGGCTGCAGGATAAAAATATCCGAATTTTTTatg > 1:13956868‑M2/1‑32 (MQ=255) tGGCTGCAGGATAAAAATATCCGAATTTTTTatgg < 1:9399895‑M2/35‑5 (MQ=255) tGGCTGCAGGATAAAAATATCCGAATTTTTTatgg < 1:18581216‑M2/35‑5 (MQ=255) tGGCTGCAGGATAAAAATATCCGAATTTTTTatgg < 1:10018677‑M2/35‑5 (MQ=255) ggCTGCAGGATAAAAATATCCGAATTTTTTatggc > 1:1973674‑M2/1‑30 (MQ=255) ggCTGCAGGATAAAAATATCCGAATTTTTTatggc > 1:15086578‑M2/1‑30 (MQ=255) gCTGCAGGATAAAAATATCCGAATTTTTTatggcg > 1:3972729‑M2/1‑29 (MQ=255) gCTGCAGGATAAAAATATCCGAATTTTTTatggcg > 1:14941281‑M2/1‑29 (MQ=255) cTGCAGGATAAAAATATCCGAATTTTTTatggcga > 1:11191661‑M2/1‑28 (MQ=255) cTGCAGGATAAAAATATCCGAATTTTTTatggcga < 1:16062957‑M2/35‑8 (MQ=255) cTGCAGGATAAAAATATCCGAATTTTTTatggcga > 1:17078098‑M2/1‑28 (MQ=255) cTGCAGGATAAAAATATCCGAATTTTTTatggcga > 1:5542878‑M2/1‑28 (MQ=255) cTGCAGGATAAAAATATCCGAATTTTTTatggcga < 1:17392060‑M2/35‑8 (MQ=255) cTGCAGGATAAAAATATCCGAATTTTTTatggcga < 1:7842982‑M2/35‑8 (MQ=255) cTGCAGGATAAAAATATCCGAATTTTTTatggcga > 1:9602989‑M2/1‑28 (MQ=255) tGCAGGATAAAAATATCCGAATTTTTTatggcgac < 1:9471682‑M2/35‑9 (MQ=255) tGCAGGATAAAAATATCCGAATTTTTTatggcgaa < 1:19507092‑M2/35‑9 (MQ=255) tGCAGGATAAAAATATCCGAATTTTTTatggcgaa < 1:14047611‑M2/35‑9 (MQ=255) tGCAGGATAAAAATATCCGAATTTTTTATGGCGAt < 1:18333425/35‑1 (MQ=255) tGCAGGATAAAAATATCCGAATTTTTTATGGCGAt < 1:14281419/35‑1 (MQ=255) tGCAGGATAAAAATATCCGAATTTTTTATGGCGAt < 1:5739229/35‑1 (MQ=255) gCAGGATAAAAATATCCGAATTTTTTatggcgaaa < 1:9325125‑M2/35‑10 (MQ=255) gCAGGATAAAAATATCCGAATTTTTTATGGCGAtt < 1:1968877/35‑1 (MQ=255) gCAGGATAAAAATATCCGAATTTTTTATGGCGAtt < 1:14364024/35‑1 (MQ=255) gCAGGATAAAAATATCCGAATTTTTTATGGCGAtt < 1:14037092/35‑1 (MQ=255) ccggATAAAAATATCCGAATTTTTTATGGCGATTc < 1:7251430/33‑1 (MQ=255) cAGGATAAAAATATCCGAATTTTTTatggcgaaat < 1:838534‑M2/35‑11 (MQ=255) cAGGATAAAAATATCCGAATTTTTTATGGCGATTc < 1:6216861/35‑1 (MQ=255) cAGGATAAAAATATCCGAATTTTTTATGGCGATTc < 1:11683076/35‑1 (MQ=255) cAGGATAAAAATATCCGAATTTTTTATGGCGATTc < 1:15945157/35‑1 (MQ=255) cAGGATAAAAATATCCGAATTTTTTATGGCGATTc < 1:4196636/35‑1 (MQ=255) ggATAAAAATATCCGAATTTTTTATGGCGATTCTg < 1:14785839/35‑1 (MQ=255) ggATAAAAATATCCGAATTTTTTATGGCGATTCTg < 1:8570232/35‑1 (MQ=255) gATAAAAATATCCGAATTTTTTATGGCGATTCTGa < 1:9047392/35‑1 (MQ=255) aTAAAAATATCCGAATTTTTTatggcgaaaattat < 1:5860789‑M2/35‑15 (MQ=255) aTAAAAATATCCGAATTTTTTatggcgaaaattaa < 1:14252996‑M2/35‑15 (MQ=255) aTAAAAATATCCGAATTTTTTATGGCGATTCTGAt < 1:3375435/35‑1 (MQ=255) aTAAAAATATCCGAATTTTTTATGGCGATTCTGAt < 1:19875002/35‑1 (MQ=255) tAAAAATATCCGAATTTTTTatggcgaaaattata < 1:7664345‑M2/35‑16 (MQ=255) tAAAAATATCCGAATTTTTTATGGCGATTCTGATa < 1:3281761/35‑1 (MQ=255) tAAAAATATCCGAATTTTTTATGGCGATTCTGATa < 1:5114537/35‑1 (MQ=255) aaaaaTATCCGAATTTTTTATGGCGATTCTGATaa < 1:18791123/35‑1 (MQ=255) aaaaaTATCCGAATTTTTTATGGCGATTCTGATaa < 1:11574278/35‑1 (MQ=255) aaaaaTATCCGAATTTTTTATGGCGATTCTGATaa < 1:729308/35‑1 (MQ=255) aaaaaTATCCGAATTTTTTATGGCGATTCTGATaa < 1:3144701/35‑1 (MQ=255) aaaaTATCCGAATTTTTTatggcgaaaattataat < 1:5475791‑M2/35‑18 (MQ=255) aaaaTATCCGAATTTTTTatggcgaaaattataat < 1:13713380‑M2/35‑18 (MQ=255) aaaaTATCCGAATTTTTTATGGCGATTCTGATAAt < 1:14676536/35‑1 (MQ=255) aaaaTATCCGAATTTTTTATGGCGATTCTGATAAt < 1:18666576/35‑1 (MQ=255) aaaaTATCCGAATTTTTTATGGCGATTCTGATAAt < 1:11634520/35‑1 (MQ=255) aaaaTATCCGAATTTTTTATGGCGATTCTGATAAt < 1:17022984/35‑1 (MQ=255) aaaTATCCGAATTTTTTatggcgaaacttataatt < 1:15657991‑M2/35‑19 (MQ=255) aaaTATCCGAATTTTTTatggcgaaaattataatt < 1:14121080‑M2/35‑19 (MQ=255) aaaTATCCGAATTTTTTATGGCGATTCTGATAATg < 1:15133103/35‑1 (MQ=255) aaaTATCCGAATTTTTTATGGCGAAAATGATAAta > 1:16903545/1‑34 (MQ=18) atatCCGAATTTTTTATGGCGATTCTGATAATGaa < 1:17135076/35‑2 (MQ=255) atatCCGAATATTTTATGGCGATTCTGATAATGat < 1:13850058/35‑1 (MQ=255) tatCCGAATTTTTTATGGCGATTCTGATAATGata < 1:1050695/35‑1 (MQ=255) tatCCGAATTTTTTATGGCGATTCTGATAATGata < 1:14229298/35‑1 (MQ=255) tatCCGAATTTTTTATGGCGATTCTGATAATGata < 1:15177955/35‑1 (MQ=255) tatCCGAATTTTTTATGGCGATTCTGATAATGata < 1:15782236/35‑1 (MQ=255) tatCCGAATTTTTTATGGCGATTCTGATAATGata < 1:3027161/35‑1 (MQ=255) tatCCGAATTTTTTATGGCGATTCTGATAATGata < 1:4615499/35‑1 (MQ=255) tatCCGAATTTTTTATGGCGATTCTGATAATGata < 1:5662095/35‑1 (MQ=255) atCCGAATTTTTTATGGCGATTCTGATAATGatat < 1:17647134/35‑1 (MQ=255) atCCGAATTTTTTATGGCGATTCTGATAATGatat < 1:20063168/35‑1 (MQ=255) atCCGAATTTTTTATGGCGATTCTGATAATGatat < 1:9092214/35‑1 (MQ=255) atCCGAATTTTTTATGGCGATTCTGATAATGatat < 1:3803967/35‑1 (MQ=255) tCCGAATTTTTTATGGCGATTCTGATAATGATAtt < 1:9652118/35‑1 (MQ=255) tCCGAATTTTTTATGGCGATTCTGATAATGATAtt < 1:20218982/35‑1 (MQ=255) tCCGAATTTTTTATGGCGATTCTGATAATGATAtt < 1:545214/35‑1 (MQ=255) tCCGAATTTTTTATGGCGATTCTGATAATGATAtt < 1:7298983/35‑1 (MQ=255) tCCGAATTTTTTATGGCGATTCTGATAATGATAtt < 1:1126075/35‑1 (MQ=255) ccGAATTTTTTATGGCGATTCTGATAATGATATTa < 1:5776831/35‑1 (MQ=255) cGAATTTTTTATGGCGATTCTGATAATGATATTAc < 1:190287/35‑1 (MQ=255) cGAATTTTTTATGGCGATTCTGATAATGATATTAc < 1:5258624/35‑1 (MQ=255) cGAATTTTTTATGGCGATTCTGATAATGATATTAc < 1:16802918/35‑1 (MQ=255) cGAATTTTTTATGGCGATTCTGATAATGATATTAc < 1:20202648/35‑1 (MQ=255) gAATTTTTTATGGCGATTCTGATAATGATATTaac < 1:13121873/35‑3 (MQ=255) gAATTTTTTATGGCGATTCTGATAATGATATTAcc < 1:681046/35‑1 (MQ=255) aaTTTTTTATGGCGATTCTGATAATGATATTAccg < 1:19873660/35‑1 (MQ=255) aaTTTTTTATGGCGATTCTGATAATGATATTAccg < 1:16818515/35‑1 (MQ=255) tttATGGCGATTCTGATAATGATATTAACGCCGCa < 1:10671232/35‑1 (MQ=255) tttATGGCGATTCTGATAATGATATTAACGCCGCa < 1:5640532/35‑1 (MQ=255) | CAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCA > REL606/4248880‑4248945 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |