New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1306329 = | 80 (0.780) | 14 (0.190) | 4/34 | NT | 22.1% | intergenic (‑90/+281) | cls/kch | cardiolipin synthetase/voltage‑gated potassium channel |
? | REL606 | = 3839377 | 42 (0.580) | coding (1104/2415 nt) | gyrB | DNA gyrase subunit B |
Only 100 of 153 total aligned reads displayed.
GGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCA > REL606/3839343‑3839411 | gggcaGCATCGATAATTTTGCCAACCACGATTTTc < 1:18705535/35‑1 (MQ=255) gggcaGCATCGATAATTTTGCCAACCACGATTTTc > 1:16459603/1‑35 (MQ=255) ggCAGCATCGATAATTTTGCCAACCACGATTTTCg < 1:13500888‑M2/35‑2 (MQ=255) ggCAGCATCGATAATTTTGCCAACCACGATTTTCg < 1:16852067‑M2/35‑2 (MQ=255) ggCAGCATCGATAATTTTGCCAACCACGATTTTCg > 1:127104‑M2/1‑34 (MQ=255) ggCAGCATCGATAATTTTGCCAACCACGATTTTCg > 1:7943895‑M2/1‑34 (MQ=255) gcagcaTCGATAATTTTGCCAACCACGATTTTCgc < 1:5616079‑M2/35‑3 (MQ=255) gcagcaTCGATAATTTTGCCAACCACGATTTTCgc < 1:11478283‑M2/35‑3 (MQ=255) gcagcaTCGATAATTTTGCCAACCACGATTTTCgc < 1:20056396‑M2/35‑3 (MQ=255) gcagcaTCGATAATTTTGCCAACCACGATTTTCgc > 1:20046787‑M2/1‑33 (MQ=255) gcagcaTCGATAATTTTGCCAACCACGATTTTCgc > 1:9115333‑M2/1‑33 (MQ=255) gcaccaTCGATAATTTTGCCAACCACGATTTTCgc > 1:19572273‑M2/1‑33 (MQ=255) cagcaTGGATAATTTTGCCAACCACGATTTTCgcg > 1:6330722‑M2/1‑32 (MQ=255) cagcaTCGATAATTTTGCCAACCACGATTTTCgcg < 1:6519010‑M2/35‑4 (MQ=255) cagcaTCGATAATTTTGCCAACCACGATTTTCgcg > 1:9343872‑M2/1‑32 (MQ=255) cagcaTCGATAATTTTGCCAACCACGATTTTCgcg > 1:10159023‑M2/1‑32 (MQ=255) agcaTCGATAATTTTGCCAACCACTATTTTCgcgt < 1:1044839‑M2/35‑5 (MQ=255) agcaTCGATAATTTTGCCAACCACGATTTTCgcgt < 1:2134764‑M2/35‑5 (MQ=255) agcaTCGATAATTTTGCCAACCACGATTTTCgcgt < 1:9100762‑M2/35‑5 (MQ=255) agcaTCGATAATTTTGCCAACCACGATTTTCgcgt < 1:16462238‑M2/35‑5 (MQ=255) agcaTCGATAATTTTGCCAACCACGATTTTCgcgt < 1:13367382‑M2/35‑5 (MQ=255) gcaTCGATAATTTTGCCAACCACGATTTTCgcgtc > 1:7037561‑M2/1‑30 (MQ=255) gcaTCGATAATTTGGCCAACCACGATTTTCgcgtc > 1:5200717‑M2/1‑30 (MQ=255) caTCGATAATTTTGCCAACCACGATTTTCgcgtcg > 1:4111994‑M2/1‑29 (MQ=255) caTCGATAATTTTGCCAACCACGATTTTCgcgtcg > 1:16605384‑M2/1‑29 (MQ=255) caTCGATAATTTTGCCAACCACGATTTTCgcgtcg < 1:10670310‑M2/35‑7 (MQ=255) aTCGATAATTTTGCCAACCACGATTTTCgcgtcgg > 1:18240348‑M2/1‑28 (MQ=255) aTCGATAATTTTGCCAACCACGATTTTCgcgtcgg > 1:2647862‑M2/1‑28 (MQ=255) aTCGATAATTTTGCCAACCACGATTTTCgcgtcgg > 1:18732603‑M2/1‑28 (MQ=255) aTCGATAATTTTGCCAACCACGATTTTCgcgtcgg < 1:14952106‑M2/35‑8 (MQ=255) aTCGATAATTTTGCCAACCACGATTTTCgcgtcgg < 1:9699923‑M2/35‑8 (MQ=255) tCGATAATTTTGCCAACCACGATTTTCgcgtctgg < 1:11600657‑M2/35‑9 (MQ=255) tCGATAATTTTGCCAACCACGATTTTCgcgtcggg < 1:13267415‑M2/35‑9 (MQ=255) tCGATAATTTTGCCAACCACGATTTTCGCGTCGGt < 1:17761378/35‑1 (MQ=255) tCGATAATTTTGCCAACCACGATTTTCGCGTCGGt < 1:3277989/35‑1 (MQ=255) tCGATAATTTTGCCAACCACGATTTTCGCGTCGGt < 1:6041839/35‑1 (MQ=255) tCGATAAGTTTGCCAACCACGATTTTCGCGTCGGt < 1:14691130/35‑1 (MQ=255) cGATAATTTTGCCAACCACGATTTTCgcgtcgggg < 1:5132009‑M2/35‑10 (MQ=255) cGATAATTTTGCCAACCACGATTTTCgcgtcgggg < 1:12332230‑M2/35‑10 (MQ=255) cGATAATTTTGCCAACCACGATTTTCGCGTCGGtt < 1:11704757/35‑1 (MQ=255) cGATAATTTTGCCAACCACGATTTTCGCGTCGGtt < 1:7167710/35‑1 (MQ=255) cGATAATTTTGCCAACCACGATTTTCGCGTCGGtt < 1:18047642/35‑1 (MQ=255) cGATAATTTTGCCAACCACGATTTTCGCGTCGGtt < 1:14556220/35‑1 (MQ=255) gATAATTTTGCCAACCACGATTTTCgcgtcggggg < 1:11945611‑M2/35‑11 (MQ=255) aTAATTTTGCCAACCACGATTTTCgcgtcgggggg < 1:16377498‑M2/35‑12 (MQ=255) aTAATTTTGCCAACCACGATTTTCgcgtcgggggg < 1:18671535‑M2/35‑12 (MQ=255) aTAATTTTGCCAACCACGATTTTCgcgtcgggggg < 1:260117‑M2/35‑12 (MQ=255) aTAATTTTGCCAACCACGATTTTCgcgtcgggggg < 1:8568513‑M2/35‑12 (MQ=255) aTAATTTTGCCAACCACGATTTTCGCGTCGGTTgg < 1:17604975/35‑1 (MQ=255) aTAATTTTGCCAACCACGATTTTCGCGTCGGTTgg < 1:3238725/35‑1 (MQ=255) tAATTTTGCCAACCACGATTTTCgcgtcggggggg < 1:16692973‑M2/35‑13 (MQ=255) tAATTTTGCCAACCACGATTTTCgcgtcggggggg < 1:10995621‑M2/35‑13 (MQ=255) tAATTTTGCCAACCACGATTTTCGCGTCGGTTggg < 1:3529382/35‑1 (MQ=255) tAATTTTGCCAACCACGATTTTCGCGTCGGTTggg < 1:15418194/35‑1 (MQ=255) aaTTTTGCCAACCACGATTTTCGCGTCGGTTGGGt < 1:3769830/35‑1 (MQ=255) aaTTTTGCCAACCACGATTTTCGCGTCGGTTGGGt < 1:11722062/35‑1 (MQ=255) aaTTTTGCCAACCACGATTTTCGCGTCGGTTGGGt < 1:18920331/35‑1 (MQ=255) aTTTTGCCAACCACGATTTTCGCGTCGGTTGGGtt < 1:9423412/35‑1 (MQ=255) ttttGCCAACCACGATTTTCgcgtcgggggggggt < 1:2148225‑M2/35‑16 (MQ=255) ttttGCCAACCACGATTTTCgcgtcgggggggggg < 1:19819937‑M2/35‑16 (MQ=255) ttttGCCAACCACGATTTTCgcgtcgggggggggg < 1:11338889‑M2/35‑16 (MQ=255) ttttGCCAACCACGATTTTCgcgtcgggggggggg < 1:6363326‑M2/35‑16 (MQ=255) ttttGCCAACCACGATTTTCGCGTCGGTTGGGttt < 1:19814998/35‑1 (MQ=255) ttttGCCAACCACGATTTTCGCGTCGGTTGGGttt < 1:19106629/35‑1 (MQ=255) tttGCCAACCACGATTTTCgcgtcggggggggggt < 1:19099097‑M2/35‑17 (MQ=255) tttGCCAACCACGATTTTCgcgtcggggggggggg < 1:4094026‑M2/35‑17 (MQ=255) tttGCCAACCACGATTTTCGCGTCGGTTGGGtttt < 1:18338077/35‑1 (MQ=255) tttGCCAACCACGATTTTCGCGTCGGTTGGGtttt < 1:17207246/35‑1 (MQ=255) ttGCCAACCACGATTTTCgcgtcgggggggggggt < 1:6814266‑M2/35‑18 (MQ=255) ttGCCAACCACGATTTTCGCGTCGGTTGGGTTTTc < 1:10533782/35‑1 (MQ=255) ttGCCAACCACGATTTTCGCGTCGGTTGGGTTTTc < 1:10346474/35‑1 (MQ=255) ttGCCAACCACGATTTTCGCGTCGGTTGGGTTTTc < 1:20543822/35‑1 (MQ=255) ttGCCAACCACGATTTTCGCGTCGGTTGGGTTTTc < 1:20235514/35‑1 (MQ=255) tGCCAACCACGATTTTCgcgtcgggggggggggtg < 1:3049611‑M2/35‑19 (MQ=255) tGCCAACCACGATTTTCGCGTCGGTTGGGTTTTcc < 1:14528657/35‑1 (MQ=255) tGCCAACCACGATTTTCGCGTCGGTTGGGTTTTcc < 1:4952006/35‑1 (MQ=255) gCCAACCACGATTTTCGCGTAGGTTGGGTTTTCca < 1:14790177/35‑1 (MQ=255) ccAACCACGATTTTCGCGTCGGTTGGGTTTTCcag < 1:8218918/35‑1 (MQ=255) ccAACCACGATTTTCGCGTCGGTTGGGTTTTCcag < 1:4895736/35‑1 (MQ=255) cAACCACGATTTTCGCGTCGGTTGGGTTTTCcagc < 1:15573212/35‑1 (MQ=255) aaCCACGATTTTCGCGTCGGTTGGGTTTTCcagca < 1:3723565/35‑1 (MQ=255) aaCCACGATTTTCGCGTCGGTTGGGTTTTCcagca < 1:12847573/35‑1 (MQ=255) aCCACGATTTTCGCGTCGGTTGGGTTTTCcagcag < 1:6039634/35‑1 (MQ=255) ccACGATTTTCGCGTCGGTTGGGTTTTCCAGCAgg < 1:6539985/35‑1 (MQ=255) cACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGt < 1:7934149/35‑1 (MQ=255) cGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAt < 1:6335120/35‑1 (MQ=255) cGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAt < 1:698007/35‑1 (MQ=255) gATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAtt < 1:12513971/35‑1 (MQ=255) gATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAtt < 1:13545435/35‑1 (MQ=255) aTTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTc < 1:13695333/35‑1 (MQ=255) aTTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTc < 1:19474240/35‑1 (MQ=255) tttCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTg < 1:13929112/35‑1 (MQ=255) tttCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTg < 1:17522274/35‑1 (MQ=255) tttCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTg < 1:10880892/35‑1 (MQ=255) ttCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGc < 1:3134745/35‑1 (MQ=255) ttCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGc < 1:10179303/35‑1 (MQ=255) tCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGcc < 1:1859353/35‑1 (MQ=255) cgcgTCGGTTGGGTTTTCCAGCAGGTATTCTGCca < 1:5914290/35‑1 (MQ=255) cgcgTCGGTTGGGTTTTCCAGCAGGTATTCTGCca < 1:14656414/35‑1 (MQ=255) cgcgTCGGTTGGGTTTTCCAGCAGGTATTCTGCca < 1:10150650/35‑1 (MQ=255) | GGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCA > REL606/3839343‑3839411 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |