New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 290073192 (0.900)9 (0.110) 3/40 NT 13.3% coding (82/771 nt) yqeC hypothetical protein
?REL606 4370910 = 41 (0.480)intergenic (+97/+173) glyY/yjeS tRNA‑Gly/predicted Fe‑S electron transport protein

Only 100 of 152 total aligned reads displayed.

GCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAGCACCAACAACAGAAATCACAGTGGGACGTTTCTGC  >  REL606/2900697‑2900765
                                  |                                  
gccagccaAAAAAGCAAGCTGGTTTTCCCCCCAGC                                    <  1:14733318‑M1/35‑1 (MQ=255)
   agccaAAAAAGCAAGCTTGTTTTCCCCCCAGCAcc                                 >  1:10394809/1‑35 (MQ=255)
   agccaAAAAAGCAAGCTGGTTTTCCCCCCAGCAcc                                 <  1:16658389/35‑1 (MQ=255)
     ccaAAAAAGCAAGCTGGTTTTCCCCCCAGCACcaa                               >  1:4979109/1‑35 (MQ=255)
      caAAAAAGCAAGCTGGTTTTCCCCCCAGCACcaac                              >  1:18697466/1‑35 (MQ=255)
       aaaaaaGCAAGCTGGTTTTCCCCCCAGCACcaaca                             >  1:17666173/1‑35 (MQ=255)
       aaaaaaGCAAGCTGGTTTTCCCCCCAGCACcaaca                             <  1:18427788/35‑1 (MQ=255)
       aaaaaaGCAAGCTGGTTTTCCCCCCAGCACcaaca                             >  1:3578188/1‑35 (MQ=255)
        aaaaaGCAAGCTGGTTTTCCCCCCAGCACcaacaa                            <  1:14456217/35‑1 (MQ=255)
        aaaaaGCAAGCTGGTTTTCCCCCCAGCACcaacaa                            >  1:6670457/1‑35 (MQ=255)
        aaaaaGCAAGCTGGTTTTCCCCCCAGAACcaacaa                            <  1:19385378/35‑1 (MQ=255)
         aaaaGCAAGCTGGTTTTCCCCCCAGCACCaacaac                           >  1:10237228/1‑35 (MQ=255)
         aaaaGCAAGCTGGTTTTCCCCCCAGCACCaacaac                           >  1:6603711/1‑35 (MQ=255)
         aaaaGCAAGCTGGTTTTCACCCCAGCACCaacaac                           <  1:15312552/35‑1 (MQ=255)
          aaaGCAAGCTGGTTTTCCCCCCAGCACCAacaaca                          >  1:17860715/1‑35 (MQ=255)
          aaaGCAAGCTGGTTTTCCCCCCAGCACCAacaaca                          <  1:11669445/35‑1 (MQ=255)
           aagcaagcTGGTTTTCCCCCCAGCACCAACAACAg                         <  1:8051691/35‑1 (MQ=255)
           aagcaagcTGGTTTTCCCCCCAGCACCAACAACAg                         <  1:3076506/35‑1 (MQ=255)
           aagcaagcTGGTTTTCCCCCCAGCACCAACAACAg                         >  1:5329194/1‑35 (MQ=255)
           aagcaagcTGGTTTTCCCCCCAGCACCAACAACAg                         >  1:19924041/1‑35 (MQ=255)
            agcaagcTTGTTTTCCCCCCAGCACCAACAACAGa                        >  1:15635739/1‑35 (MQ=255)
             gcaatcTGGTTTTCCCCCCAGCACCAACAACAGaa                       >  1:6086883/1‑35 (MQ=255)
              caagcTGGTTTTCCCCCCAGCACCAACAACAGaaa                      >  1:11510195/1‑35 (MQ=255)
               aagcTTGTTGTCCCCCCAGCACCAACAACAGAAAt                     <  1:20243943/35‑1 (MQ=37)
               aagcTGGTTTTCCCCCCAGCACCAACAACAGAAAt                     <  1:10194184/35‑1 (MQ=255)
               aagcTGGTTTTCACCCCAGCACCAACAACAGAAAt                     <  1:19236128/35‑1 (MQ=255)
               aagcTGGTTTGCCCCCCAGCACCAACAACAGAAAt                     <  1:12392941/35‑1 (MQ=255)
                agcTGGTTTTCCCCCCAGCACCAACAACAGAAATc                    >  1:929703/1‑35 (MQ=255)
                agcTGGTTTTCCCCCCAGCACCAACAACAGAAATc                    <  1:10910099/35‑1 (MQ=255)
                agcTGGTTTTCCCCCCAGCACCAACAACAGAAATc                    <  1:10366538/35‑1 (MQ=255)
                 gcTGGTTTTCCCCCCAGCACCAACAACAGAAATca                   <  1:20561239/35‑1 (MQ=255)
                 gcTGGTTTTCCCCCCAGCACCAACAACAGAAATca                   >  1:20197307/1‑35 (MQ=255)
                 gcTGGTTTTCCCCCCAGCACCAACAACAGAAATca                   >  1:13073657/1‑35 (MQ=255)
                   tGGTTTTCCCCCCAGCACCAACAACAGAAATcaca                 >  1:14149668/1‑35 (MQ=255)
                   tGGTTTTCCCCCCAGCACCAACAACAGAAATcaca                 <  1:11697900/35‑1 (MQ=255)
                   tGGTTTTCCCCCCAGCACCAACAACAGAAATcaca                 >  1:8915447/1‑35 (MQ=255)
                   tGGTTTTCCCCCCAGCACCAACAACAGAAATcaca                 >  1:18363479/1‑35 (MQ=255)
                    ggTTTTCCCCCCAGCctcaggctgtaatcttaatt                <  1:7261011‑M1/35‑21 (MQ=255)
                    ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg                >  1:2367186/1‑35 (MQ=255)
                    ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg                <  1:6728476/35‑1 (MQ=255)
                    ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg                <  1:3663884/35‑1 (MQ=255)
                    ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg                >  1:4166293/1‑35 (MQ=255)
                    ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg                >  1:16701845/1‑35 (MQ=255)
                    ggTTTTCCCCCCAGCACCAACAACAGAAATCACAg                <  1:16433228/35‑1 (MQ=255)
                    agatttcccCCCAGCctcaggctgtaatcttaatt                <  1:1322952‑M1/32‑21 (MQ=255)
                     gTTTTCCCCCCAGCACCAACAACAGAAATCACAGt               >  1:2242059/1‑35 (MQ=255)
                     gTTTTCCCCCCAGCACCAACAACAGAAATCACAGt               <  1:13804549/35‑1 (MQ=255)
                     gTTTTCCCCCCAGCACCAACAACAGAAATCACAGt               <  1:9180199/35‑1 (MQ=255)
                     gTTTTCCCCCCAGCACCAACAACAGAAATCACAGt               <  1:10095603/35‑1 (MQ=255)
                      ttttCCCCCCAGCctcaggctgtaatcttaatttc              <  1:6951668‑M1/35‑23 (MQ=255)
                      ttttCCCCCCAGCACCAACAACAGAAATCACAGTg              <  1:13456973/35‑1 (MQ=255)
                      ttttCCCCCCAGCACCAACAACAGAAATCACAGTg              >  1:3263523/1‑35 (MQ=255)
                      ttttCCCCCCAGCACCAACAACAGAAATCACAGTg              <  1:4489863/35‑1 (MQ=255)
                      ttttCCCCCCAGCACCAACAACAGAAATCACAGTg              <  1:8296951/35‑1 (MQ=255)
                      atttcCCCCCAGCctcaggctgtaatcttaatttc              <  1:2779359‑M1/34‑23 (MQ=255)
                      atttcCCCCCAGCctcaggctgtaatcttaatttc              <  1:9793257‑M1/34‑23 (MQ=255)
                      atttcCCCCCAGCctcaggctgtaatcttaatttc              <  1:1331012‑M1/34‑23 (MQ=255)
                       tttCCCCCCAGCctcaggctgtaatcttaatttca             <  1:17567557‑M1/35‑24 (MQ=255)
                       tttCCCCCCAGCACCAACAACAGAAATCACAGTgg             >  1:18680914/1‑35 (MQ=255)
                       tttCCCCCCAGCACCAACAACAGAAATCACAGTgg             >  1:2821050/1‑35 (MQ=255)
                       tttACCCCCAGCctcaggctgtaatcttaatttca             <  1:3037177‑M1/35‑24 (MQ=255)
                        ttCCCCCCAGCACCAACAACAGAAATCACAGTggg            >  1:12894823/1‑35 (MQ=255)
                        ttCCCCCCAGCACCAACAACAGAAATCACAGTggg            >  1:11042044/1‑35 (MQ=255)
                        ttCCCCCCAGCACCAACAACAGAAATCACAGTggg            <  1:19430143/35‑1 (MQ=255)
                        ttCCCCCCAGCACCAACAACAGAAATCACAGTggg            >  1:15950842/1‑35 (MQ=255)
                          ccccccAGCGCCAACAACAGAAATCACCGTGGGAc          <  1:18949538/35‑1 (MQ=37)
                          ccccccAGCACCAACAACAGAAATCACAGTGGGAc          <  1:9266412/35‑1 (MQ=255)
                          ccccccAGCACCAACAACAGAAATCACAGTGGGAc          >  1:3238950/1‑35 (MQ=255)
                          ccccccAGCACCAACAACAGAAATCACAGTGGGAc          >  1:9010622/1‑35 (MQ=255)
                          ccccccAGCACCAACAACAGAAATCACAGTGGGAc          >  1:7878661/1‑35 (MQ=255)
                          acccccaGCctcaggctgtaatcttaatttcaaag          <  1:17509686‑M1/34‑27 (MQ=255)
                           cccccAGCACCAACAACAGAAATCACAGTGGGACg         <  1:18968972/35‑1 (MQ=255)
                           cccccAGCACCAACAACAGAAATCACAGTGGGACg         >  1:2692893/1‑35 (MQ=255)
                           cccccAGCACCAACAACAGAAATCACAGTGGGACg         <  1:14633418/35‑1 (MQ=255)
                            ccccAGCctcaggctgtaatcttaatttcaaagaa        <  1:11631308‑M1/35‑29 (MQ=255)
                             cccAGCctcaggctgtaatcttaatttcaaagaaa       <  1:385628‑M1/35‑30 (MQ=255)
                             cccAGCACCAACAACAGAAATCACAGTGGGACGtt       <  1:7568229/35‑1 (MQ=255)
                             cccAGCACCAACAACAGAAATCACAGTGGGACGtt       <  1:16702159/35‑1 (MQ=255)
                             cccAGCACCAACAACAGAAATCACAGTGGGACGtt       <  1:19135900/35‑1 (MQ=255)
                             cccAGCACCAACAACAGAAATCACAGTGGGACGtt       <  1:2007012/35‑1 (MQ=255)
                              ccAGCctcaggctgtaatcttaatttcaaagaaac      <  1:12059952‑M1/35‑31 (MQ=255)
                              ccAGCACCAACAACAGAAATCACAGTGGGACGttt      <  1:905057/35‑1 (MQ=255)
                              ccAGCACCAACAACAGAAATCACAGTGGGACGttt      <  1:550063/35‑1 (MQ=255)
                              ccAGCACCAACAACAGAAAACACAGTTGGACGttt      >  1:1265524/1‑35 (MQ=37)
                               cAGCctcaggctgtaatcttaatttcaaagaaact     <  1:13972433‑M1/35‑32 (MQ=255)
                               cAGCctaaggctgtaatcttaatttcaaagaaact     <  1:15319638‑M1/35‑32 (MQ=255)
                               cAGCACCAACAACAGAAATCACAGTGGGACGTTTc     >  1:12779848/1‑35 (MQ=255)
                               cAGCACCAACAACAGAAATCACAGTGGGACGTTTc     <  1:16962375/35‑1 (MQ=255)
                                aGCctcaggctgtaatcttaatttcaaagaaactt    >  1:12827926‑M1/1‑3 (MQ=255)
                                aGCACCAACAACAGAAATCACAGTGGGACGTTTCt    <  1:19230031/35‑1 (MQ=255)
                                aGCACCAACAACAGAAATCACAGTGGGACGTTTCt    >  1:18006259/1‑35 (MQ=255)
                                aGCACCAACAACAGAAATCACAGTGGGACGTTTCt    <  1:1202054/35‑1 (MQ=255)
                                 gCctcaggctgtaatcttaatttcaaagaaacttc   <  1:2086155‑M1/35‑34 (MQ=255)
                                 gCACCAACAACAGAAATCACAGTGGGACGTTTCt  >  1:20314385/1‑34 (MQ=255)
                                 gCACCAACAACAGAAATCACAGTGGGACGTTTCTg   <  1:10134320/35‑1 (MQ=255)
                                 gCACCAACAACAGAAATCACAGTGGGACGTTTCTg   >  1:7424265/1‑35 (MQ=255)
                                 gCACCAACAACAGAAATCACAGTGGGACGTTTCTg   <  1:6516077/35‑1 (MQ=255)
                                  cctcaggctgtaatcttaatttcaaagaaacttcg  <  1:4873618‑M1/35‑35 (MQ=255)
                                  cACCAACAACAGAAATCACAGTGGGACGTTTCTgc  <  1:824529/35‑1 (MQ=255)
                                  cACCAACAACAGAAATCACAGTGGGACGTTTCTgc  <  1:7234421/35‑1 (MQ=255)
                                  |                                  
GCCAGCCAAAAAAGCAAGCTGGTTTTCCCCCCAGCACCAACAACAGAAATCACAGTGGGACGTTTCTGC  >  REL606/2900697‑2900765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.