New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2131846 | 71 (0.690) | 4 (0.040) | 3/46 | NT | 7.0% | coding (848/1053 nt) | fbaB | fructose‑bisphosphate aldolase |
? | REL606 | 2517490 = | 38 (0.390) | coding (76/864 nt) | ypfJ | hypothetical protein |
GCCTGCAGCACCGCCGGAGTTTATCAACCCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2131812‑2131846 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCCCATAGATGGACCACCAGAGCTGTTGCGCCT > REL606/2517490‑2517523 GCCTGCAGCACCGCCGGAGTTTATCAACCCGGCCC > 1:12135044/1‑35 AACCCGGCCCCGCCCATAGATGGACCACCAGAGCT < 1:9533917/35‑1 ACCCGGCCCCGCCCATAGATGGACCACCAGAGCTG < 1:11478054/35‑1 ACCCGGCCCCGCCCATAGATGGACCACCAGAGCTG < 1:8847089/35‑1 CCCGGCCCCGCCCATAGATGGACCACCAGAGCTGT < 1:6092893/35‑1 GGCCCCGCCCATAGATGGACCACCAGAGCTGTTGC < 1:1909173/35‑1 GGCCCCGCCCATAGATGGACCACCAGAGCTGTTGC < 1:20179815/35‑1 GGCCCCGCCCATAGATGGACCACCAGAGCTGTTGC < 1:20403071/35‑1 ggCCCGCCCATAGATGGACCACCAGAGCTGTTGCG < 1:271233/33‑1 CCCCGCCCATAGATGGACCACCAGAGCTGTTGCGC < 1:19893074/35‑1 CCCGCCCATAGATGGACCACCAGAGCTGTTGCGCC < 1:11257680/35‑1 CCCGCCCATAGATGGACCACCAGAGCTGTTGCGCC < 1:11400163/35‑1 CCGCCCATAGATGGACCACCAGAGCTGTTGCGCCT < 1:2661434/35‑1 CCGCCCATAGATGGACCACCAGAGCTGTTGCGCCT > 1:6091900/1‑35 GCCTGCAGCACCGCCGGAGTTTATCAACCCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2131812‑2131846 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCCCATAGATGGACCACCAGAGCTGTTGCGCCT > REL606/2517490‑2517523 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |