New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2962019 = | 71 (0.690) | 12 (0.160) | 4/34 | NT | 19.5% | coding (1189/1278 nt) | yggP | predicted dehydrogenase |
? | REL606 | 3792210 = | 49 (0.670) | coding (316/414 nt) | ECB_03532 | hypothetical protein |
AGGCAAAACCGATCCGCTGTTTAAAGAGTTGGCGCGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2962059‑2962019 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctggGTGGGGGAAATCGATCCATATGGTTATTTTTCAG > REL606/3792210‑3792243 AGGCAAAACCGATCCGCTGTTTAAAGAGTTGGCGC > 1:18417899/1‑35 AGGCAAAACCGATCCGCTGTTTAAAGAGTTGGCGC > 1:15414008/1‑35 AGGCAAAACCGATCCGCTGTTTAAAGAGTTGGCGC > 1:8851595/1‑35 AGGCAAAACCGATCAGCTGTTTAAAGAGTTGGCGC < 1:6365185/35‑1 GCAAACCCGATCCGCTGTTTAAAGAGTTGGCGCGG < 1:16394742/35‑1 CAAAACCGATCCGCTGTTTAAAGAGTTGGCGCGGC > 1:16239139/1‑35 CAAAACCGATCCGCTGTTTAAAGAGTTGGCGCGGC > 1:9361146/1‑35 AAACCCGATCCGCTGTTTAAAGAGTTGGCGCGGCT < 1:17183009/35‑1 AAACCCGATCCGCTGTTTAAAGAGTTGGCGCGGCT < 1:5343486/35‑1 AAACCCGATCCGCTGTTTAAAGAGTTGGCGCGGCT < 1:11829912/35‑1 AAAACCGATCCGCTGTTTAAAGAGTTGGCGCGGgt > 1:7968559/1‑33 aacCCGATCCGCTGTTTAAAGAGTTGGCGCGGCTG < 1:1128323/32‑1 AAACCGATCCGCTGTTTAAAGAGTTGGCGCGGCTG > 1:17174343/1‑35 AAACCGATCCGCTGTTTAAAGAGTTGGCGCGGCTG > 1:12162294/1‑35 AAACCGATCAGCTGTTTAAAGAGTTGGCGCGGCTG < 1:878128/35‑1 ccCCGATCCGCTGTTTAAAGAGTTGGCGCGGCTGG < 1:2347085/33‑1 AACCGATCCGCTGTTTAAAGAGTTGGCGCGGCTGG > 1:2618353/1‑35 GATCCGCTGTTTAAAGAGTTGGCGCGGCTGGGGGG > 1:12625255/1‑35 GATCCGCTGTTTAAAGAGTTGGCGCGGCTGGGGGG > 1:1355159/1‑35 GATCCGCTGTTTAAAGAGTTGGCGCGGCTGGGGGG > 1:15363002/1‑35 CCGCTGTTTAAAGAGTTGGCGCGGCTGGGTGGGGG > 1:3095025/1‑35 CGCTGTTTAAAGAGTTGGCGCGGCTGGGTGGGGaa > 1:738952/1‑33 CGCTGTTTAAAGAGTTGGCGCGGCTGGGTGGGGGA > 1:12797180/1‑35 CGCTGTTTAAAGAGTTGGCGCGGCTGGGTGGGGGA > 1:19478089/1‑35 CGCTGTTTAAAGAGTTGGCGCGGCTGGGTGAGGGA > 1:3368885/1‑35 CGCTGTTTAAAGAGTTGGCGCGGCTGGGTGAGGGA > 1:9884877/1‑35 GCTGTTTAAAGAGTTGGCGCGGCTGGGTGGGGGAA > 1:5185258/1‑35 GCTGTTTAAAGAGTTGGCGCGGCTGGGGGGGGGAA > 1:10601733/1‑35 CTGTTTAAAGAGTTGGCGCGGCTGGGTGGGGGAAA > 1:1758478/1‑35 CTGTTTAAAGAGTTGGCGCGGCTGGGTGGGGGAAA > 1:13235260/1‑35 TGTTTAAAGAGTTGGCGCGGCTGGGTGGGGAAAAg > 1:1441835/1‑34 GTTTAAAGAGTTGGCGCGGCTGGGTGGGGGAAAgc > 1:9586665/1‑33 CGGCTGGGTGTGGGAAATCGATCCATATGGTTATT > 1:7924097/1‑35 CGGCTGGGTGGGGGAAATCGATCCATATGGTTATT < 1:17922336/35‑1 tGCTGGGTGGGGGAAATCGATCCATATGGTTATTT < 1:15447231/34‑1 GGCTGGGTGGGGGAAATCGATCCATATGGTTATTT > 1:574808/1‑35 GGCTGGGTGGGGGAAATCGATACATATGGTTATTT < 1:20097486/35‑1 GCTGGGTGGGGGAAATCGATCCATATGGTTATTTT < 1:1984745/35‑1 GCTGGGTGGGGGAAATCGATCCATATGGTTATTTT > 1:1489464/1‑35 GCTGGGTGGGGGAAATCGATCCATATGGTTATTTT > 1:15476910/1‑35 GCTGGGTGGGGGAAATCGATCCATATGGTTATTTT < 1:1757506/35‑1 CTGGGTGGGGGAAATCGATCCATATGGTTATTTTT < 1:7692850/35‑1 CTGGGTGGGGGAAATCGATCCATATGGTTATTTTT < 1:20495253/35‑1 CTGGGTGGGGGAAATCGATCCATATGGTTATTTTN < 1:16471710/35‑1 TGGGTGGGGGAAATCTATCCATATGGTTATTTTTC > 1:16041226/1‑35 TGGGTGGGGGAAATCGATCCATATGGTTATTTTTC > 1:7152778/1‑35 TGGGTGGGGGAAATCGATCCATATGGTTATTTTTC > 1:13859242/1‑35 GGGTGGGGGAAATCGATCCATATGGTTATTTTCCA < 1:19263989/35‑1 GGTGGGGGAAATCGATCCATATGGTTATTTTTTAG > 1:11437667/1‑35 GGTGGGGGAAATCGATCCATATGGTTATTTTTCAG < 1:15877813/35‑1 GGTGGGGGAAATCGATCCATATGGTTATTTTTCAG > 1:7544366/1‑35 GGTGGGGGAAATCGATCCATATGGTTATTTTTCAG < 1:17461139/35‑1 AGGCAAAACCGATCCGCTGTTTAAAGAGTTGGCGCGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2962059‑2962019 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctggGTGGGGGAAATCGATCCATATGGTTATTTTTCAG > REL606/3792210‑3792243 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |