New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1 = | 0 (0.000) | 138 (1.340) | 44/48 | NT | 100% | intergenic (–/‑189) | –/thrL | –/thr operon leader peptide |
? | REL606 | = 4629812 | 0 (0.000) | intergenic (+24/–) | lasT/– | predicted rRNA methyltransferase/– |
Only 100 of 172 total aligned reads displayed.
GACATATTGCCCGTTGCAGTCAGAATGAAAAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/34‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAAAATACTTACTAAGGCGTTTTTTATTTGGTG < REL606/4629812‑4629779 GACATATTGCCCGTTGCAGTCAGAATGAAAAGCTG > 1:10155585/1‑35 GACATATTGCCCGTTGCAGTCAGAATGAAAAGCTG > 1:9643794/1‑35 GACATATTGCCCGTTGCAGTCAGAATGAAAAGCTG < 1:6491259/35‑1 GACATATTGCCCGTTGCAGTCAGAATGAAAAGCTG < 1:4261549/35‑1 GACATATTGCCCGTTGCAGTCAGAATGAAAAGCTG < 1:1963572/35‑1 GACATATTGCCCGTTGCAGTCAGAATGAAAAGCTG < 1:11909924/35‑1 GACATATTGCCCGTTGCAGTCAGAATGAAAAGCTG > 1:13385037/1‑35 ACATATTGCCCGTTGCAGTCAGAATGAAAAGCTGA > 1:471445/1‑35 ACATATTGCCCGTTGCAGTCAGAATGAAAAGCTGA < 1:18227986/35‑1 CATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAA > 1:989113/1‑35 CATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAA < 1:15567660/35‑1 ATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAA > 1:7211853/1‑35 ATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAA > 1:5833886/1‑35 ATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAA < 1:20467417/35‑1 ATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAA > 1:9580031/1‑35 ATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAA > 1:14200957/1‑35 TTGCCCGTTTCAGTCAGAATGAAAAGCTGAAAAAT > 1:8957497/1‑35 TTGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAct > 1:3830666/1‑33 TTGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAAT < 1:10408355/35‑1 TTGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAAT > 1:14318466/1‑35 TGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATA < 1:1757959/35‑1 GCCCGTTGCAGTCAGAATGAAAAGCTGANNAATNN > 1:20258472/1‑35 GCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATAC > 1:15904014/1‑35 GCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATAC > 1:12121598/1‑35 GCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATAC > 1:15072621/1‑35 GCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATAC < 1:4290219/35‑1 GCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATAC > 1:4901699/1‑35 GCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATAC > 1:7763189/1‑35 GCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATAC < 1:8322326/35‑1 CCCGTTGCAGTCAGAATGAAAAGCTGAAAAATACT < 1:1839053/35‑1 CCCGTTGCAGTCAGAATGAAAAGCTGAAAAATACT > 1:910186/1‑35 CCCGTTGCAGTCAGAATGAAAAGCTGAAAAATACT < 1:10253143/35‑1 CCCGTTGCAGTCAGAATGAAAAGCTGAAAAATACT > 1:12633690/1‑35 CCGTTGCAGTCAGAATGAAAAGCTGAAAAATACTT < 1:19716525/35‑1 CGTTGCAGTCAGAATGAAAAGCTGAAAAATACTTA > 1:2938087/1‑35 CGTTGCAGTCAGAATGAAAAGCTGAAAAATACTTA > 1:1464278/1‑35 CGTTGCAGTCAGAATGAAAAGCTGAAAAATACTTA < 1:5874184/35‑1 CGTTGCAGTCAGAATGAAAAGCTGAAAAATACTTA > 1:179734/1‑35 CGTTGCAGTCAGAATGAAAAGCTGAAAAATACTTA < 1:13362912/35‑1 GTTGCAGTCAGAATGAAAAGCTGAAAAATACTTAC > 1:20463859/1‑35 TTGCAGTCAGAATGAAAAGCTGAAAAATACTTACT < 1:20248857/35‑1 TGCAGTCAGAATGAAAAGCTGAAAAATACTTACTA < 1:10690759/35‑1 TGCAGTCAGAATGAAAAGCTGAAAAATACTTACTA < 1:20013663/35‑1 GCAGTCAGAATGAAAAGCTGAAAAATACTTACTAA > 1:7874839/1‑35 GCAGTCAGAATGAAAAGCTGAAAAATACTTACTAA > 1:12823694/1‑35 CAGTCAGAATGAAAAGCTGAAAAATACTTACTAAG < 1:5273002/35‑1 CAGTCAGAATGAAAAGCTGAAAAATACTTACTAAG > 1:20179481/1‑35 CAGTCAGAATGAAAAGCTGAAAAATACTTACTAAG > 1:5315748/1‑35 CAGTCAGAATGAAAAGCTGAAAAATACTTACTAAG > 1:9682316/1‑35 CAGTCAGAATGAAAAGCTGAAAAATACTTACTAAG < 1:16227911/35‑1 CAGTCAGAATGAAAAGCTGAAAAATACTTACTAAG > 1:3616282/1‑35 AGTCAGAATGAAAAGCTGAAAAATACTTACTAAGG < 1:13853584/35‑1 AGTCAGAATGAAAAGCTGAAAAATACTTACTAAGG > 1:13759871/1‑35 AGTCAGAATGAAAAGCTGAAAAATACTTACTAAGG < 1:15763985/35‑1 AGTCAGAATGAAAAGCTGAAAAATACTTACTAAGG < 1:4601836/35‑1 GTCAGAATGAAAAGCTGAAAAATACTTACTAAGGC < 1:17190333/35‑1 TCAGAATGAAAAGCTGAAAAATACTTACTAAGGCG < 1:7357259/35‑1 TCAGAATGAAAAGCTGAAAAATACTTACTAAGGCG > 1:12777178/1‑35 TCAGAATGAAAAGCTGAAAAATACTTACTAAGGCG > 1:19551784/1‑35 CAGAATGAAAAGCTGAAAAATGCTTACTAAGGCGT < 1:19762767/35‑1 CAGAATGAAAAGCTGAAAAATACTTACTAAGGCGT < 1:3021842/35‑1 CAGAATGAAAAGCTGAAAAATACTTACTAAGGCGT > 1:3314504/1‑35 CAGAATGAAAAGCTGAAAAATACTTACTAAGGCGT > 1:16883227/1‑35 CAGAATGAAAAGCTGAAAAATACTTACTAAGGCGT > 1:1318703/1‑35 CAGAATGAAAAGCTGAAAAATACTTACTAAGGCGT > 1:14703614/1‑35 AGAATGAAAAGCTGAAAAATACTTACTAAGGCGTT > 1:17690743/1‑35 AGAATGAAAAGCTGAAAAATACTTACTAAGGCGTT > 1:15645208/1‑35 AGAATGAAAAGCTGAAAAATACTTACTAAGGCGTT > 1:18771194/1‑35 AGAATGAAAAGCTGAAAAATACTTACTAAGGCGTT < 1:6441600/35‑1 AGAATGAAAAGCTGAAAAATACTTACTAAGGCGTT > 1:11379169/1‑35 AGAATGAAAAGCTGAAAAATACTTACTAAGGCGTT < 1:10868547/35‑1 GAATGAAAAGCTGAAAAATACTTACTAAGGCGTTT < 1:16409069/35‑1 GAATGAAAAGCTGAAAAATACTTACTAAGGCGTTT > 1:7121790/1‑35 GAATGAAAAGCTGAAAAATACTTACTAAGGCGTTT < 1:8836985/35‑1 AATGAAAAGCTGAAAAATACTTACTAAGGCGTTTT > 1:8429812/1‑35 AATGAAAAGCTGAAAAATACTTACTAAGGCGTTTT > 1:7641035/1‑35 AATGAAAAGCTGAAAAATACTTACTAAGGCGTTTT < 1:13837302/35‑1 ATGAAAAGCTGAAAAATACTTACTAAGGCGTTTTT < 1:3774898/35‑1 ATGAAAAGCTGAAAAATACTTACTAAGGCGTTTTT > 1:17017762/1‑35 TGAAGAGCTGAAAAATACTTACTAAGGCGTTTTTT < 1:9023592/35‑1 TGAAAAGCTGAAAAATACTTACTAAGGCGTTTTTT < 1:8199084/35‑1 TGAAAAGCTGAAAAATACTTACTAAGGCGTTTTTT > 1:6412619/1‑35 TGAAAAGCTGAAAAATACTTACTAAGGCGTTTTTT < 1:6198436/35‑1 GAAAAGCTGAAAAATACTTACTAAGGCGTTTTTTA > 1:11216469/1‑35 GAAAAGCTGAAAAATACTTACTAAGGCGTTTTTTA > 1:5545615/1‑35 GAAAAGCTGAAAAATACTTACTAAGGCGTTTTTTA < 1:5238662/35‑1 AAAAGCTGAAAAATACTTACTAAGGCGTTTTTTAT > 1:1689522/1‑35 AAAAGCTGAAAAATACTTACTAAGGCGTTTTTTAT < 1:13495121/35‑1 AAAAGCTGAAAAATACTTACTAAGGCGTTTTTTAT > 1:16071356/1‑35 AAAAGCTGAAAAATACTTACTAAGGCGTTTTTTAT > 1:8060942/1‑35 AAAAGCTGAAAAATACTTACTAAGGCGTTTTTTAT > 1:13977483/1‑35 AAAAGCTGAAAAATACTTACTAAGGCGTTTTTTAT > 1:15417366/1‑35 AAAGCTGAAAAATACTTACTAAGGCGTTTTTTATT > 1:3637612/1‑35 AAAGCTGAAAAATACTTACTAAGGCGTTTTTTATT < 1:5174962/35‑1 AAGCTGAAAAATACTTACTAAGGCGTTTTTTATTT > 1:5663260/1‑35 GCTGAAAAATACTTACTAAGGCGTTTTTTATTTGG > 1:7785479/1‑35 CTGAAAAATACTTACTAAGGCGTTTTTTATTTGGT > 1:20391163/1‑35 CTGAAAAATACTTACTAAGGCGTTTTTTATTTGGT > 1:2836537/1‑35 TGAAAAATACTTACTAAGGCGTTTTTTATTTGGTG < 1:1159136/35‑1 TGAAAAATACTTACTAAGGCGTTTTTTATTTGGTG > 1:15087608/1‑35 GACATATTGCCCGTTGCAGTCAGAATGAAAAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/34‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAAAATACTTACTAAGGCGTTTTTTATTTGGTG < REL606/4629812‑4629779 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |