New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3826321 = | 43 (0.420) | 5 (0.060) | 3/42 | NT | 9.5% | coding (314/1662 nt) | yidE | hypothetical protein |
? | REL606 | = 3885956 | 58 (0.650) | coding (39/1890 nt) | gidA | glucose‑inhibited division protein A |
Only 100 of 101 total aligned reads displayed.
CGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAA > REL606/3885922‑3885990 | cgGCCATCGCGGCCTCGGTGCCTGCATGACCCCCg < 1:15642728/35‑1 (MQ=255) ggCCATCGCGGCCTCGGTGCCTGCATGACCCCCGc < 1:8733523‑M2/35‑2 (MQ=255) ggCCATCGCGGCCTCGGTGCCGGCATGACCCCCGc > 1:39411‑M2/1‑34 (MQ=255) gCCATCGCGGCCTCGGTGCCTGCATGACCCCCGcc > 1:4368942‑M2/1‑33 (MQ=255) ccTTCGCGGCCTCGGTGCCTGCATGACCCCCGcca > 1:5020117‑M2/1‑32 (MQ=255) ccATCGCGGCCTCGGTGCCTGCATGACCCCCGcca < 1:14863452‑M2/35‑4 (MQ=255) ccATCGCGGCCTCGGTGCATGCATGACCCCCGcca > 1:19313459‑M2/1‑32 (MQ=255) ccAGCGCGGCCTCGGTGCCTGCATGACCCCCGcca > 1:16688094‑M2/1‑32 (MQ=255) cATCGCGGCCTCGGTGCCTGCATGACCCCCGCCaa > 1:16130923/1‑35 (MQ=255) cATCGCGGCCTCGGTGCCTGCATGACCCCCGCCaa < 1:18941007/35‑1 (MQ=255) cATCGCGGCCTCGGTGCCTGCATGACCCCCGCCaa > 1:13608913/1‑35 (MQ=255) aTCGCTGCCTCGGTGCCTGCATGACCCCCGCCAat > 1:16222426/1‑35 (MQ=255) aTCGCGGCCTCGGTGCCTGCATGACCCCCGCCAat > 1:12274313/1‑35 (MQ=255) aTCGCGGCCTCGGTGCCTGCATGACCCCCGCCAat > 1:5775570/1‑35 (MQ=255) aTCGCGGCCTCGGTGCCTGCATGACCCCCGCCAat > 1:5981441/1‑35 (MQ=255) aTCGCGGCCTCGGTGCCTGCATGACCCCCGCCAat > 1:17639629/1‑35 (MQ=255) tCGCGGCCTCGGTGCCTGCATGACCCCCGCCAatg > 1:13780476/1‑35 (MQ=255) cgcgGCCTCGGTGCCTGCATGACCCCCGCCAatga > 1:5439970/1‑35 (MQ=255) cgcgGCCTCGGTGCCTGCATGACCCCCGCCAatga > 1:3188322/1‑35 (MQ=255) cgcgGCCTCGGTGCCTGCATGACCCCCGCCAatga > 1:13975218/1‑35 (MQ=255) gcgGCCTCGGTGCCTGCATGACCCCCGCCAatgat > 1:20059038/1‑35 (MQ=255) gcgGCCTCGGTGCCTGCATGACCCCCGCCAatgat > 1:13310959/1‑35 (MQ=255) cgGCCTCGGTGCCTGCATGCCCCCCGCCAatgatg < 1:15897305/35‑1 (MQ=255) cgGCCTCGGTGCCTGCATGACCCCCGCCAatgatg > 1:7306972/1‑35 (MQ=255) ggCCTCGGTGCCTGTATGACCCCCGCCAatgatga > 1:20306410/1‑35 (MQ=255) ggCCTCGGTGCCTGCATGACCCCCGCCAatgatga > 1:13821605/1‑35 (MQ=255) ggCCTCGGTGCCTGCATGACCCCCGCCAatgatga > 1:431557/1‑35 (MQ=255) ggCCTCGGTGCCTGCATGACCCCCGCCAatgatga > 1:8284185/1‑35 (MQ=255) tccTCGGTCCCTGCATCCCCCCCGCCAatgatgat < 1:3677076/34‑1 (MQ=255) gCCTCGGTGCCTGCATGCCCCCCGCCAatgatgat < 1:16645603/35‑1 (MQ=255) gCCTCGGTGCCTGCATGCCCCCCGCCAatgatgat < 1:18711055/35‑1 (MQ=255) gCCTCGGTGCCTGCATGACCCCAGCCAatgatgat < 1:9283065/35‑1 (MQ=255) ccTCGGTGCCTGCATGACCCCCGCCAatgatgatg > 1:8252425/1‑35 (MQ=255) cTCGGTGCCTGCATGCCCCCCGCCAAtgatgatga < 1:2489302/35‑1 (MQ=255) cTCGGTGCCTGCATGCCCCCCGCCAAtgatgatga < 1:3879872/35‑1 (MQ=255) cTCGGTGCCTGCATGACCCCCGCCAAtgatgatga > 1:4153487/1‑35 (MQ=255) tCGGTGCCTGCATGCCCCCCGCCAATGATGATGAc < 1:5963296/35‑1 (MQ=255) tCGGTGCCTGCATGCCCCCCGCCAATGATGATGAc < 1:7616623/35‑1 (MQ=255) tCGGTGCCTGCATGCCCCCCGCCAATGATGATGAc < 1:8312946/35‑1 (MQ=255) tCGGTGCCTGCATGACCCCCGCCAATGATTATGAc > 1:10023363/1‑35 (MQ=255) cGGTGCCTGCATGCCCCCCGCCAATGATGATGACg < 1:3682850/35‑1 (MQ=255) ggTGCCTGCATGCCCCCCGCCAATGATGATGACGt < 1:14413187/35‑1 (MQ=255) ggTGCCTGCATGACCCCCGCCAATGATGATGACGt > 1:13969085/1‑35 (MQ=255) ggTGCCTGCATCCCCCCCGCCAATGATGATGACGt < 1:15708907/35‑1 (MQ=37) ggTCCCTGCATGCCCCCCGCCAATGATGATGACGt < 1:9045967/35‑1 (MQ=37) gTGCCTGCATGACCCCCGCCAATGATGATGACGTc > 1:8128607/1‑35 (MQ=255) gTGCCTGCATGACCCCCGCCAATGATGATGACGTc > 1:15700365/1‑35 (MQ=255) gTGCCGGCAAGCCCCCCGCCAATGATGATGACGTc < 1:8857963/35‑1 (MQ=25) tGCCTGCATGACCCCCGCCAATGATGATGACGTCa > 1:13492021/1‑35 (MQ=255) ccTGCATGCCCCCCGCCAATGATGATGACGTCaaa < 1:14885730/35‑1 (MQ=255) ccTGCATGACCCCCTCCAATGATGATGACGTCaaa > 1:3703264/1‑35 (MQ=255) ccTGCATGACCCCCGCCAATTATTATGACGTCaaa > 1:1085532/1‑35 (MQ=38) cTGCATGCCCCCCGCCAATGATGATGACGTCaaaa < 1:11896122/35‑1 (MQ=255) cTGCATGACCCCCGCCAATGATGATGACGTCaaaa > 1:20187644/1‑35 (MQ=255) cTGCATGACCCCCGCCAATGATGATGACGTCaaaa > 1:13659242/1‑35 (MQ=255) cTGCATGACCCCCGCCAATGATGATAACGTCaaaa < 1:8286647/35‑1 (MQ=255) tGCATGCCCCCCGCCAATGATGATGACGTCAAAAg < 1:11440113/35‑1 (MQ=255) tGCATGACCCCCGCCAATGATGATGACGTCAAAAg > 1:17046159/1‑35 (MQ=255) tGCATGACCCCCGCCAATGATGATGACGTCAAAAg > 1:6570974/1‑35 (MQ=255) gCATGCCCCCCGCCAATGATGATGACGTCAAAAgg < 1:4226253/35‑1 (MQ=255) gCATGACCCCCGCCAATGATGATTACGTCAAAAgg > 1:5678325/1‑35 (MQ=255) gCATGACCCCCGCCAATGATGATGACGTCAAAAgg > 1:7792144/1‑35 (MQ=255) gCATGACCCCCGCCAATGATGATGACGTCAAAAgg < 1:16733714/35‑1 (MQ=255) cATGCCCCCCGCCAATGATGATGACGTCAAAAGGa < 1:382747/35‑1 (MQ=255) cATGCCCCCCGCCAATGATGATGACGTCAAAAGGa < 1:6490319/35‑1 (MQ=255) aTGCCCCCCGCCAATGATGATGACGTCAAAAGGAt < 1:789781/35‑1 (MQ=255) aTGACCCCCGCCAATGATGATGACGTCAAAAGGAt > 1:3678276/1‑35 (MQ=255) aTGACCCCCGCCAATGATGATGACGTCAAAAGGAt > 1:5118590/1‑35 (MQ=255) tgccccccGCCAATGATGATGACGTCAAAAGGATc < 1:5878471/32‑1 (MQ=255) tGACCCCCGCCAATGATGATGACGTCAAAAGGATc > 1:19035029/1‑35 (MQ=255) gACCCCCGCCAATGATGATGACGTCAAAAGGATcc > 1:12405202/1‑35 (MQ=255) gACCCCCGCCAATGATGATGACGTCAAAAGGATcc > 1:14583493/1‑35 (MQ=255) gACCCCCCccaccgatgatgacgatcagaacagca > 1:7885463‑M2/1‑8 (MQ=255) cccccccccaccgatgatgacgatcagaacagcaa > 1:752571‑M2/2‑7 (MQ=255) ccccccGCCAATGATGATGACGTCAAAAGGATCCg < 1:15915154/34‑1 (MQ=255) ccccccGCCAATGATGATGACGTCAAAAGGATCCg < 1:440663/34‑1 (MQ=255) aCCCCCGCCAATGATGATGACGTCAAAAGGATCCg > 1:12653575/1‑35 (MQ=255) aCCCCCCccaccgatgatgacgatcagaacagcaa > 1:7376010‑M2/1‑7 (MQ=255) cccccGCCAATGATGATGACGTCAAAAGGATCCgt > 1:6248404/1‑34 (MQ=255) cccccGCCAATGATGATGACGTCAAAAGGATCCgg < 1:12141192/35‑1 (MQ=255) cccccGCCAATGATGATGACGTCAAAAGGATCCgg > 1:485082/1‑35 (MQ=255) cccccGCCAATGATGATGACGTCAAAAGGATCCgg < 1:7340197/35‑1 (MQ=255) cccccGCAAATGATGATGACGTCAAAAGGATCCgg < 1:324471/35‑1 (MQ=255) cccccCccaccgatgatgacgatcagaacagcaaa > 1:12042794‑M2/1‑6 (MQ=255) cccccCccaccgatgatgacgatcagaacagcaaa > 1:13702779‑M2/1‑6 (MQ=255) ccccCccaccgatgatgacgatcagaacagcaaac > 1:18638028‑M2/1‑5 (MQ=255) cccGCCAATGATGATGACGTCAAAAGGATCCGGAt > 1:119063/1‑35 (MQ=255) cccGCCAATGATGATGACGTCAAAAGGATCCGGAt > 1:5773262/1‑35 (MQ=255) cccCccaccgatgatgacgatcagaacagcaaaca > 1:19357248‑M2/1‑4 (MQ=255) ccGCCAATGATGATGACGTCAAAAGGATCCGGATa < 1:7189866/35‑1 (MQ=255) ccGCCAATGATGATGACGTCAAAAGGATCCGGATa < 1:2053190/35‑1 (MQ=255) ccGCCAATGATGATGACGTCAAAAGGATCCGGATa < 1:1808560/35‑1 (MQ=255) ccGCCAATGATGATGACGTCAAAAGGATCCGGATa > 1:9126931/1‑35 (MQ=255) ccCccaccgatgatgacgatcagaacagcaaacag > 1:6782207‑M2/1‑3 (MQ=255) ccCccaccgatgatgacgatcagaacagcaaacag > 1:2400438‑M2/1‑3 (MQ=255) ccCccaccgatgatgacgatcagaacagcaaacag > 1:11309648‑M2/1‑3 (MQ=255) ccCccaccgatgatgacgatcagaacagcaaacag > 1:19525106‑M2/1‑3 (MQ=255) gCCAATGATGATGACGTCAAAAGGATCCGGATaaa < 1:11918135/35‑1 (MQ=255) gCCAATGATGATGACGTCAAAAGGATCCGGATaaa > 1:11932379/1‑35 (MQ=255) gCCAATGATGATGACGTCAAAAGGATCCGGATaaa < 1:8408186/35‑1 (MQ=255) | CGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAA > REL606/3885922‑3885990 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |