New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 293548 | 72 (0.700) | 8 (0.090) | 5/42 | NT | 9.4% | coding (673/855 nt) | ykgD | predicted DNA‑binding transcriptional regulator |
? | REL606 | 2499664 = | 92 (1.020) | coding (171/951 nt) | talA | transaldolase A |
CTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/293512‑293548 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgGGGTAAAAAAAATGGCAAGACCCAGGAACAACAG > REL606/2499664‑2499697 CTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGC < 1:11393609/35‑1 TTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCT < 1:15617103/35‑1 TTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCT < 1:3233013/35‑1 TTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCT < 1:2675126/35‑1 TTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTG < 1:9222910/35‑1 TTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTG < 1:18928225/35‑1 TTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTG > 1:20583692/1‑35 TTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGG > 1:188588/1‑35 TCCGTGATGTTTCCGGAACCACGCCGCTGGCTGGG > 1:9781566/1‑35 TCCGTGATGTTTCCGGAACCACGCCGCTGGCTGGG > 1:12369593/1‑35 TCCGTGATGTTTCCGGAACCACGCCGCTGGCTGGG > 1:3438991/1‑35 CCGTGATGTTTCCGGAACCACGCCGCTGGCTGGGG > 1:7252076/1‑35 CCGTGATGTTTCCGGAACCACGCCGCTGGCTGGGG > 1:5172696/1‑35 CCGTGATGTTTCCGGAACCACGCCGCTGGCTGGGG > 1:3489510/1‑35 CGTGATGTTTCCGGAACCACGCCGCTGGCTGGGGg > 1:4707327/1‑34 GTGATGTTTCCGGAACCACGCCGCTGGCTGGGGga > 1:3515771/1‑33 GTGATGTTTCCGGAACCACGCCGCTGGCTGGGGTt > 1:1034722/1‑34 GTGATGTTTCCGGAACCACGCCGCTGGCTGGGGTg > 1:14875917/1‑34 TGATGTTTCCGGAACCACGCCGCTGGCTGGGGgtt > 1:18537440/1‑32 TGATGTTTCCGGAACCACGCCGCTGGCTGGGGgta > 1:5334112/1‑32 TGATGTTTCCGGAACCACGCCGCTGGCTGGGGTAA > 1:18949629/1‑35 TGTTTCCGGAACCACGCCGCTGGCTGGGGTTAAAA > 1:9944165/1‑35 GTTTCCGGAACCACGCCGCTGGCTGGGGTTAAAAA > 1:19848010/1‑35 GTTTCCGGAACCACGCCGCTGGCTGGGGTAACAAA > 1:20106708/1‑35 GTTTCCGGAACCACGCCGCTGGCTGGGGTAAAAAA > 1:7345752/1‑35 TTTCCGGAACCACGCCGCTGGCTGGGGTTAAAAAA > 1:13866670/1‑35 TTTCCGGAACCACGCCGCTGGCTGGGGTTAAAAAA > 1:5147344/1‑35 CCGGAACCACGCCGCTGGCTGGGGTTAAAAAAATG > 1:6788244/1‑35 CTGGGGTAAAAAAAATGGCAAGCCCCAGGAACAAC < 1:15492635/35‑1 CTGGGGTAAAAAAAATGGCAAGACCCAGGAACAAC > 1:12909872/1‑35 cGGGGTAAAAAAAATGGCAAGACCCAGGAACAACA < 1:11342634/34‑1 TGGGGTAAAAAAAATGGCAAGGCCCAGGAACAACA < 1:3333261/35‑1 TGGGGTAAAAAAAATGGCAAGACCCAGGAACAACA < 1:19016989/35‑1 TGGGGTAAAAAAAATGGCAAGACCCAGGAACAACA > 1:17467494/1‑35 GGGGTAAAAAAAATGGCAAGACCCAGGAACAACAG > 1:5784354/1‑35 GGGGTAAAAAAAATGGCAAGACCCAGGAACAACAG > 1:12676865/1‑35 GGGGTAAAAAAAATGGCAAGACCCAGGAACAACAG > 1:365293/1‑35 GGGGTAAAAAAAATGGCAAGACCCAGGAACAACAG > 1:9083873/1‑35 GGGGTAAAAAAAATGGCAAGACCCAGGAACAACAG < 1:312491/35‑1 CTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/293512‑293548 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgGGGTAAAAAAAATGGCAAGACCCAGGAACAACAG > REL606/2499664‑2499697 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |