New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3040638 | 93 (0.910) | 11 (0.140) | 3/38 | NT | 14.8% | coding (649/810 nt) | pppA | bifunctional prepilin leader peptidase/ methylase |
? | REL606 | 4567447 = | 53 (0.650) | coding (1808/2151 nt) | yjiY | predicted inner membrane protein |
Only 100 of 242 total aligned reads displayed.
GCAACGTTGGGCAGTGATAACGCCCCCACCCAGCCACCTAAAGCGGCGAAGAGTAATACATCGCCCATG > REL606/3040604‑3040672 | gCAACGTTGGGCAGTGATAACGCCCCCACCCAGCC < 1:3066035‑M1/35‑1 (MQ=255) cGTTGGGCAGTGATAACGCCCCCACCCAGCCACCt > 1:10222368/1‑35 (MQ=255) cGTTGGGCAGTGATAACGCCCCCACCCAGCCACCt < 1:13582016/35‑1 (MQ=255) cGTTGGGCAGTGATAACGCCCCCACCCAGCCACCt > 1:9676080/1‑35 (MQ=255) gTTGGGCAGTGATAACGCCCCCACCCAGCCACCTa > 1:5208425/1‑35 (MQ=255) gTTGGGCAGTGATAACGCCCCCACCCAGCCACCTa > 1:7675151/1‑35 (MQ=255) gTTGGGCAGTGATAACGCCCCCACCCAGCCACCTa > 1:20595882/1‑35 (MQ=255) tGGGCAGTGATAACGCCCCCACCCAGCCACCTaaa < 1:10657909/35‑1 (MQ=255) tGGGCAGTGATAACGCCCCCACCCAGCCACCTaaa < 1:4203986/35‑1 (MQ=255) ggCAGTGATAACGCCCCCACCCAGCCACCTAAAgc < 1:4690714/35‑1 (MQ=255) gCAGTGATAGCGCCCCCACCCAGCCACCTAAAgcg < 1:11439554/35‑1 (MQ=255) gCAGTGATAACGCCCCCACCCAGCCACCTAAAgcg > 1:6836959/1‑35 (MQ=255) cAGTGATAACGCCCCCACCCAGCCACCTAAAgctg > 1:10349810/1‑33 (MQ=255) aGTGATAACGCCCCCACCCAGCCACCTAAAgtggc < 1:19562502/35‑1 (MQ=255) aGTGATAACGCCCCCACCCAGCCACCTAAAgcggc < 1:7259190/35‑1 (MQ=255) aGTGATAACGCCCCCACCCAGCCACCTAAAgcggc > 1:16583678/1‑35 (MQ=255) tGATAACGCCCCCACCCAGCCACCTAAAGCGGCGa < 1:6094578/35‑1 (MQ=255) tGATAACGCCCCCACCCAGCCACCTAAAGCGGCGa > 1:18519554/1‑35 (MQ=255) aTAACGCCCCCACCCAGCCACCTAAAGCGGCGAag > 1:14741136/1‑35 (MQ=255) aaCGCCCCCACCCAGCCACCTAAAGCGGCGAagag > 1:19771463/1‑35 (MQ=255) aaCGCCCCCACCCAGCCACCTAAAGCGGCGAagag < 1:9737489/35‑1 (MQ=255) aaCGCCCCCACCCAGCCACCTAAAGCGGCGAagag > 1:617903/1‑35 (MQ=255) aaCGCCCCCACCCAGCCACCTAAAGCGGCGAagag < 1:4956757/35‑1 (MQ=255) ccGCCCACACCCAGCCACCTAAAGCGGCGAAGAGt < 1:16348231/34‑1 (MQ=255) acccccccaccCAGCCAgcgcggatttgccccaac < 1:14210319‑M1/32‑19 (MQ=255) aCGCCCTCACCCAGCCACCTAAAGCGGCGAAGAGt > 1:12905412/1‑35 (MQ=255) aCGCCCCCACCCAGCCACCTAAAGCGGCGAAGAGt < 1:8238119/35‑1 (MQ=255) aCGCCCCCACCCAGCCACCTAAAGCGGCGAAGAGt > 1:2371598/1‑35 (MQ=255) aCGCCCCCACCCAGCCACCTAAAGCGGCGAAGAGt < 1:12771130/35‑1 (MQ=255) cGCCCCCACCCAGCCACCTAAAGCGGCGAAGAGTa < 1:14048577/35‑1 (MQ=255) cGCCCCCACCCAGACACCTAAAGCGGCGAAGAGTa < 1:12001333/35‑1 (MQ=255) gCCCCCACCCAGCCAgcgcggatttgccccaacgg < 1:10627634‑M1/35‑21 (MQ=255) gCCCCCACCCAGCCAgcgcggatttgccccaacgg < 1:17460161‑M1/35‑21 (MQ=255) ccccccaCCCAGCCAgcgcggatttgccccaacgg < 1:9301780‑M1/34‑21 (MQ=255) cccccGCCCAGCCggaacaacagttacccagatgt < 1:5289687‑M1/35‑23 (MQ=255) cacccacccagcCggaacaacagttacccagatgt < 1:17550392‑M1/33‑23 (MQ=255) gcccatccagCCggaacaacagttacccagatgta < 1:18790681‑M1/34‑24 (MQ=255) ccccACCCAGCCAgcgcggatttgccccaacggta < 1:5633891‑M1/35‑23 (MQ=255) ccccACCCAGCCAgcgcggatttgccccaacggta < 1:17235531‑M1/35‑23 (MQ=255) ccccACCCAGCCACCTAAAGCGGCGAAGAGTAATa > 1:3586085/1‑35 (MQ=255) ccccACCCAGCCACCTAAAGCGGCGAAGAGTAATa < 1:19048868/35‑1 (MQ=255) acccccccagCCggaacaacagttacccagatgta < 1:13013277‑M1/34‑24 (MQ=255) cccacccaGCCggaacaacagttacccagatgtat < 1:15161398‑M1/35‑25 (MQ=255) cccacccaGCCAgcgcggatttgccccaacggtac < 1:4475286‑M1/35‑24 (MQ=255) cccacccaGCCAgcgcggatttgccccaacggtac < 1:2481547‑M1/35‑24 (MQ=255) cccacccaGCCACCTAAAGCGGCGAAGAGTAATAc < 1:2979460/35‑1 (MQ=255) ccacccaGCCACCTAAAGCGGCGAAGAGTAATACa < 1:17127316/35‑1 (MQ=255) caacccagcCAgcgcggatttgccccaacggtaca < 1:550927‑M1/33‑25 (MQ=255) cccccagcCggaacaacagttacccagatgtattg < 1:3284306‑M1/33‑27 (MQ=255) ccccagCCggaacaacagttacccagatgtattgg < 1:11037905‑M1/34‑28 (MQ=255) ccccagCCggaacaacagttacccagatgtattgg < 1:3404639‑M1/34‑28 (MQ=255) acccaGCCAgcgcggatttgccccaacggtacgcg < 1:5540549‑M1/35‑27 (MQ=255) acccaGCCAgcgcggatttgccccaacggtacgcg < 1:19264190‑M1/35‑27 (MQ=255) acccaGCCACCTAAAGCGGCGAAGAGTAATACATc < 1:8618416/35‑1 (MQ=255) acccaGCCACCTAAAGCGGCGAAGAGTAATACATc > 1:8347669/1‑35 (MQ=255) acccaGCCACCTAAAGCGGCGAAGAGTAATACATc < 1:13837212/35‑1 (MQ=255) acccaGCCACCTAAAGCGGCGAAGAGTAATACATc > 1:15998529/1‑35 (MQ=255) acccaGCCACCTAAAGCGGCGAAGAGTAATACATc < 1:15725870/35‑1 (MQ=255) cccaGCCAgcgcggatttgccccaacggtacgcgg < 1:17943456‑M1/35‑28 (MQ=255) cccaGCCAgcgcggatttgccccaacggtacgcgg < 1:7806011‑M1/35‑28 (MQ=255) cccaGCCACCTAAAGCGGCGAAGAGTAATACATCg < 1:10955903/35‑1 (MQ=255) cccaGCCACCTAAAGCGGCGAAGAGTAATACATCg > 1:8206056/1‑35 (MQ=255) accagccagcggggatttgccccaacggtacgcgg < 1:7532043‑M1/34‑28 (MQ=255) accagccagcgcggatttgccccaacggtacgcgg < 1:3805004‑M1/34‑28 (MQ=255) ccaGCCggaacaacagttacccagatgtattgggt < 1:8729975‑M1/35‑30 (MQ=255) ccaGCCACCTAAAGCGGCGAAGAGTAATACATCGc > 1:15057770/1‑35 (MQ=255) caGCCggaacaacagttacccagatgtattgggtg < 1:8503302‑M1/35‑31 (MQ=255) caGCCggaacaacagttacacagatgtattgggtg < 1:11602959‑M1/35‑31 (MQ=255) caGCCACCTAAAGCGGCGAAGAGTAATACATCGcc > 1:3742170/1‑35 (MQ=255) caGCCACCTAAAGCGGCGAAGAGTAATACATCGcc > 1:17729530/1‑35 (MQ=255) agccagcgcggatttgccccaacggtacgcggtat > 1:18638649‑M1/1‑5 (MQ=255) agccagcgcggatttgccccaacggtacgcggtat > 1:12301898‑M1/1‑5 (MQ=255) agccagcgcggatttgccccaacggtacgcggtat > 1:18040797‑M1/1‑5 (MQ=255) aGCCACCTAAAGCGGCGAAGAGTAATACATCGccc < 1:19894162/35‑1 (MQ=255) aGCCACCTAAAGCGGCGAAGAGTAATAAACCGccc < 1:19373851/35‑1 (MQ=37) gccagcgcggatttgccccaacggtacgcggtatc < 1:11902399‑M1/35‑32 (MQ=255) gccagcgcggatttgccccaacggtacgcggtatc < 1:16169703‑M1/35‑32 (MQ=255) gccagcgcggatttgccccaacggtacgcggtata > 1:10946309‑M1/1‑4 (MQ=255) gCCggaacaacagttacccagatgtattgggtgcg > 1:5760437‑M1/1‑3 (MQ=255) gCCggaacaacagttacccagatgtattgggtgcg < 1:9228813‑M1/35‑33 (MQ=255) gCCggaacaacagttacccagatgtattgggtgcg > 1:13317056‑M1/1‑3 (MQ=255) gCCACCTAAAGCGGCGAAGAGTAATACATCGCCCa < 1:15403046/35‑1 (MQ=255) ccggaacaacagttacccagatgtattgggtgcgc > 1:14299945‑M1/1‑2 (MQ=255) ccggaacaacagttacccagatgtattgggtgcgc > 1:15884597‑M1/1‑2 (MQ=255) ccggaacaacagttacccagatgtattgggtgcgc < 1:10869296‑M1/35‑34 (MQ=255) ccggaacaacagttacccagatgtattgggtgcgc < 1:15829767‑M1/35‑34 (MQ=255) ccggaacaacagttacccagatgtattgggtgcgc > 1:1554553‑M1/1‑2 (MQ=255) ccagcgcggatttgccccaacggtacgcggtatcg < 1:10100476‑M1/35‑33 (MQ=255) ccACCTAAAGCGGCGAAGAGTAATACATCGCCCAt < 1:6389696/35‑1 (MQ=255) ccACCTAAAGCGGCGAAGAGTAATACATCGCCCAt < 1:5836908/35‑1 (MQ=255) ccACCTAAAGCGGCGAAGAGTAATACATCGCCCAt < 1:12478468/35‑1 (MQ=255) ccACCTAAAGCGGCGAAGAGTAATACATCGCCCAt < 1:13512666/35‑1 (MQ=255) cggaacaacagttacccagatgtattgggtgcgct > 1:7274518‑M1/1‑1 (MQ=255) cggaacaacagttacccagatgtattgggtgcgct > 1:11953370‑M1/1‑1 (MQ=255) cggaacaacagttacccagatgtattgggtgcgct > 1:16681461‑M1/1‑1 (MQ=255) cggaacaacagttacccagatgtattgggtgcgct > 1:3350689‑M1/1‑1 (MQ=255) cggaacaacagttacccagatgtattgggtgcgct < 1:20237443‑M1/35‑35 (MQ=255) cagcgcggatttgccccaacggtacgcggtatcgc > 1:6660442‑M1/1‑2 (MQ=255) cagcgcggatttgccccaacggtacgcggtatcgc > 1:864839‑M1/1‑2 (MQ=255) cACCTAAAGCGGCGAAGAGTAATACATCGCCCATg < 1:18505853/35‑1 (MQ=255) | GCAACGTTGGGCAGTGATAACGCCCCCACCCAGCCACCTAAAGCGGCGAAGAGTAATACATCGCCCATG > REL606/3040604‑3040672 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |