New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 640120 =107 (1.040)10 (0.100) 3/46 NT 11.1% intergenic (+38/+17) cspE/ccrB cold shock protein E/camphor resistance protein CrcB
?REL606 2388696 = 58 (0.590)coding (457/810 nt) yfcA conserved inner membrane protein

AGACCAAAAAAAAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/640136‑640120
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGACGCAGCCACCGGCTATTAACGCGAAGGGTAA  >  REL606/2388696‑2388729
                                                   
aaACCAAAAAAAAACCCCGACGCAGCCACCGGCTA                  <  1:4555264/33‑1
    ccAAAAAAAACCCCGACGCAGCCACCGGCTATTAA              <  1:17103188/33‑1
    CAAAAAAAAACCCCGACGCAGCCACCGGCTATTAA              <  1:5023736/35‑1
     cAAAAAAAACCCCGACGCAGCCACCGGCTATTAAC             <  1:11913648/34‑1
      cAAAAAAACCCCGACGCAGCCACCGGCTATTAACG            <  1:17174312/34‑1
      AAAAAAAACCCCGACGCAGCCACCGGCTATTAACG            <  1:7304020/35‑1
      AAAAAAAACCCCGACGCAGCCACCGGCTATTAACG            <  1:1520549/35‑1
      AAAAAAAACCCCGACGCAGCCACCGGCTATTAACG            <  1:10326732/35‑1
       cAAAAAACCCCGACGCAGCCACCGGCTATTAACGC           <  1:5457112/34‑1
          AAAACCCCGACGCAGCCACCGGCTATTAACGCGAA        <  1:17624291/35‑1
             cCCCCGACGCAGCCACCGGCTATTAACGCGAAGGG     <  1:12867182/34‑1
             ACCCCGACGCAGCCACCGGCTATTAACGCGAAGGG     <  1:17102213/35‑1
              CCCCGACGCAGCCACCGGCTATTAACGCGAAGGGT    <  1:18905268/35‑1
              CCCCGACGCAGCCACCGGCTATTAACGCGAAGGGT    <  1:10151763/35‑1
               CCCGCCGCAGCCACCGGCTATTAACGCGAAGGGTA   <  1:260464/35‑1
                CCGACGCAGCCACCGGCTATTAACGCGAAGGGTAA  <  1:14191187/35‑1
                CCGACGCAGCCACCGGCTATTAACGCGAAGGGTAA  <  1:18332797/35‑1
                CCGACGCAGCCACCGGCTATTAACGCGAAGGGTAA  <  1:12259354/35‑1
                                                   
AGACCAAAAAAAAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/640136‑640120
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGACGCAGCCACCGGCTATTAACGCGAAGGGTAA  >  REL606/2388696‑2388729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.