New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1398219 | 108 (1.050) | 6 (0.090) | 3/32 | NT | 8.5% | coding (725/1527 nt) | abgT | predicted cryptic aminobenzoyl‑glutamate transporter |
? | REL606 | = 1743481 | 58 (0.850) | coding (2472/3057 nt) | ydiJ | predicted FAD‑linked oxidoreductase |
Only 100 of 171 total aligned reads displayed.
AGCCTTTGATATGCTGGGCTTTGCCATTTGGTGAAAATGGCAGTAACACAGGCTGGAAACCTAATTTTT > REL606/1743447‑1743515 | aGCCTTTGATATGCTGGGCTTTGCCATTTGGTGaa < 1:9088567/35‑1 (MQ=255) tcttttgatATGCTGGGCTTTGCCATTTGGTGAAa > 1:5709652‑M2/4‑34 (MQ=255) gCCTTTGATATGCTGGGCTTTGCCATTTGGTGAAa > 1:9653931‑M2/1‑34 (MQ=255) gCCTTTGATATGCTGGGCTTTGCCATTTGGTGAAa > 1:17142996‑M2/1‑34 (MQ=255) gCCTTTGATATGCTGGGCTTTGCCATTTGGTGAAa > 1:16356404‑M2/1‑34 (MQ=255) gCCTTTGATATGCTGGGCTTTGCCATTTGGTGAAa < 1:3059685‑M2/35‑2 (MQ=255) gCCTTTGATATGCTGGGCTTTGCCATTTGGTGAAa < 1:3515313‑M2/35‑2 (MQ=255) ccTTTGATATGCTGGGCTTTGCCATTTGGTGAAaa < 1:8191266‑M2/35‑3 (MQ=255) ccTTTGATATGCTGGGCTTTGCCATTTGGTGAAaa < 1:17761999‑M2/35‑3 (MQ=255) ccTTTGATATGCTGGGCTTTGCCATTTGGTGAAaa > 1:14922342‑M2/1‑33 (MQ=255) ccTTTGATATGCTGGGCTTTGCCATTTGGTGAAaa > 1:20611052‑M2/1‑33 (MQ=255) cTTTGATATGCTGGGCTTTGCCATTTGGTGAAaat > 1:13920991‑M2/1‑32 (MQ=255) tttGATATGCTGGGCTTTGCCATTTGGTGAAaatg > 1:10631489‑M2/1‑31 (MQ=255) tttGATATGCTGGGCTTTGCCATTTGGTGAAaatg > 1:16741303‑M2/1‑31 (MQ=255) tttGATATGCTGGGCTTTGCCATTTGGTGAAaatg > 1:5321620‑M2/1‑31 (MQ=255) ttGATATGCTGGGCTTTGCCATTTGGTGAAaatgg > 1:6459844‑M2/1‑30 (MQ=255) ttGATATGCTGGGCTTTGCCATTTGGTGAAaatgg < 1:19485022‑M2/35‑6 (MQ=255) ttGATATGCTGGGCTTTGCCATTTGGTGAAaatgg < 1:4614340‑M2/35‑6 (MQ=255) tGATATGCTGGGCTTTGCCATTTGGTGAAaatggc < 1:8597862‑M2/35‑7 (MQ=255) tGATATGCTGGGCTTTGCCATTTGGTGAAaatggc > 1:17965527‑M2/1‑29 (MQ=255) tGATATGCTGGGCTTTGCCATTTGGTGAAaatggc > 1:20007338‑M2/1‑29 (MQ=255) tGATATGCTGGGCTTTGCCATTTGGTGAAaatggc > 1:20582678‑M2/1‑29 (MQ=255) tGATATGCTGGGCTTTGCCATTTGGTGAAaatggc < 1:4071585‑M2/35‑7 (MQ=255) tGATATGCTGGGCTTTGCCATTTGGTGAAaatggc > 1:3130224‑M2/1‑29 (MQ=255) gATATGCTGGGCTTTGCCATTTGGTGAAaatggca < 1:15324365‑M2/35‑8 (MQ=255) atatGCTGGGCTTTGCCATTTGGTGAAaatggcag > 1:3759504‑M2/1‑27 (MQ=255) atatGCTGGGCTTTGCCATTTGGTGAAaatggcag < 1:10656369‑M2/35‑9 (MQ=255) atatGCTGGGCTTTGCCATTTGGTGAAaatggcag > 1:9362822‑M2/1‑27 (MQ=255) atatGCTGGGCTTTGCCATTTGGTGAAaatggcag < 1:1174732‑M2/35‑9 (MQ=255) atatGCTGGGCTTTGCCATTTGGTGAAaatggcag > 1:7365372‑M2/1‑27 (MQ=255) atatGCTGGGCTTTGCCATTTGGTGAAaatggcag > 1:14653790‑M2/1‑27 (MQ=255) tatGCTGGGCTTTGCCATTTGGTTAAaatggcagg < 1:4713196‑M2/35‑10 (MQ=255) tatGCTGGGCTTTGCCATTTGGTGAAaatggcagg < 1:1985019‑M2/35‑10 (MQ=255) tatGCTGGGCTTTGCCATTTGGTGAAaatggcagg < 1:1309857‑M2/35‑10 (MQ=255) tatGCTGGGCTTTGCCATTTGGTGAAAATGGCAGt < 1:16475808/35‑1 (MQ=255) tatGCTGGGCTTTGCCATTTGGTGAAAATGGCAGt < 1:4376778/35‑1 (MQ=255) tatGCTGGGCTTTGCCATTTGGTGAAAATGGCAGt < 1:20298189/35‑1 (MQ=255) atGCTGGGCTTTGCCATTTGGTGAAaatggcaggg < 1:19921442‑M2/35‑11 (MQ=255) atGCTGGGCTTTGCCATTTGGTGAAaatggcaggg < 1:11403994‑M2/35‑11 (MQ=255) atGCTGGGCTTTGCCATTTGGTGAAaatggcaggg < 1:14657683‑M2/35‑11 (MQ=255) atGCTGGGCTTTGCCATTTGGTGAAaatggcaggg < 1:11001725‑M2/35‑11 (MQ=255) atGCTGGGCTTTGCCATTTGGTGAAaatggcaggg < 1:9912629‑M2/35‑11 (MQ=255) atGCTGGGCTTTGCCATTTGGTGAAAATGGCAGTn < 1:16880418/35‑1 (MQ=255) atGCTGGGCTTTGCCATTTGGTGAAAATGGCAGTa < 1:9290488/35‑1 (MQ=255) tcttGGGCTTTGCCATTTGGTGAAAATGGCAGTaa < 1:6919548/32‑1 (MQ=255) tGCTGGGCTTTGCCATTTGGTGAAaatggcaggga < 1:15912276‑M2/35‑12 (MQ=255) tGCTGGGCTTTGCCATTTGGTGAAAATGGCAGTaa < 1:11924920/35‑1 (MQ=255) tGCTGGGCTTTGCCATTTGGTGAAAATGGCAGTaa < 1:11382389/35‑1 (MQ=255) tGCTGGGCTTTGCCATTTGGTGAAAATGGCAGTaa < 1:5809228/35‑1 (MQ=255) gCTGGGCTTTGCCATTTGGTGAAaatggcagggac < 1:4821420‑M2/35‑13 (MQ=255) gCTGGGCTTTGCCATTTGGTGAAAATTGCAGTAac > 1:10406882/1‑35 (MQ=255) gCTGGGCTTTGCCATTTGGTGAAAATGGGAGTAac < 1:14043376/35‑1 (MQ=255) gCTGGGCTTTGCCATTTGGTGAAAATGGCAGTAac < 1:5308302/35‑1 (MQ=255) cTGGGCTTTGCCATTTGGTGAAaatggcagggaga < 1:18257719‑M2/35‑14 (MQ=255) cTGGGCTTTGCCATTTGGTGAAAATGGCAGTAaca < 1:18796588/35‑1 (MQ=255) cTGGGCTTTGCCATTTGGTGAAAATGGCAGTAaca < 1:8509215/35‑1 (MQ=255) tGGGCTTTGCCATTTGGTGAAaatggcagggagaa < 1:20361927‑M2/35‑15 (MQ=255) tGGGCTTTGCCATTTGGTGAAaatggcagggacac < 1:2397302‑M2/35‑15 (MQ=255) tGGGCTTTGCCATTTGGTGAAaatggcagggaaac < 1:4836768‑M2/35‑15 (MQ=255) tGGGCTTTGCCATTTGGTGAAAATGGCAGTAacac < 1:5325776/35‑1 (MQ=255) tGGGCTTTGCCATTTGGTGAAAATGGCAGTAacac < 1:11880932/35‑1 (MQ=255) gggCTTTGCCATTTGGTGAAAATGGCAGTAAcaca < 1:2981735/35‑1 (MQ=255) gggCTTTGCCATTTGGTGAAAATGGCAGTAAcaca < 1:706215/35‑1 (MQ=255) gggCTTTGCCATTTGGTGAAAATGGCAGTAAcaca < 1:12703458/35‑1 (MQ=255) ggCTTTGCCATTTGGTGAAaatggcagggaaacag < 1:6355704‑M2/35‑17 (MQ=255) ggCTTTGCCATTTGGTGAAAATTGCAGTAACACAg > 1:15619715/1‑35 (MQ=255) gCTTTGCCATTTGGTGAAaatggcagggacacagg < 1:12280788‑M2/35‑18 (MQ=255) gCTTTGCCATTTGGTGAAAATGGCAGTAACACAgg < 1:19572045/35‑1 (MQ=255) gCTTTGCCATTTGGTGAAAATGGCAGTAACACAgg < 1:18661240/35‑1 (MQ=255) gCTTTGCCATTTGGTGAAAATGGCAGGGAcacaag > 1:11467329/1‑33 (MQ=25) cTTTGCCATTTGGTGAAAATGGCAGTAACACAGGc < 1:2546164/35‑1 (MQ=255) cTTTGCCATTTGGTGAAAATGGCAGGGGCACAGGc > 1:4972100/1‑35 (MQ=25) cTTTGCCATTTGGTGAAAATGGCAGGGACACAAGc > 1:13571566/1‑35 (MQ=25) tttGCCATTTGGTGAAAATGGCAGTAACACAGGCt < 1:9000226/35‑1 (MQ=255) tttGCCATTTGGTGAAAATGGCAGGGACACAGGcg > 1:4660411/1‑34 (MQ=37) tttGCCATTTGGTGAAAATGGCAGGGACAAAgggg > 1:7982207/1‑33 (MQ=21) ttGCCATTTGGTGAAAATGGCAGTAACACAGGCTg < 1:7836224/35‑1 (MQ=255) tGCCATTTGGTGAAAATGGCAGGGACACAGGGTgg > 1:13716758/1‑35 (MQ=25) tGCCATTTGGTGAAAATGGCAGGGACACAGGCTgg > 1:15148795/1‑35 (MQ=37) gCCATTTGGTGAAAATGGCAGTAACACAGGCTGGa < 1:15927559/35‑1 (MQ=255) ccATTTGGTGAAAATGGCAGGGACACACGGTgggg > 1:10087590/1‑33 (MQ=16) cATTTGGTGAAAATGGCAGTAACACAGGCTGGaaa < 1:5727368/35‑1 (MQ=255) aTTTGGTGAAAATGGCAGTAACACAGGCTGGAAAc < 1:6705473/35‑1 (MQ=255) aTTTGGTGAAAATGGCAGTAACACAGGCTGGAAAc < 1:1277866/35‑1 (MQ=255) tttGGTGAAAATGGCAGTAACACAGGCTGGAAAcc < 1:9941429/35‑1 (MQ=255) tttGGTGAAAATGGCAGTAACACAGGCTGGAAAcc < 1:9546947/35‑1 (MQ=255) tttGGTGAAAATGGCAGTAACACAGGCTGGAAAcc < 1:19627404/35‑1 (MQ=255) tttGGTGAAAATGGCAGTAACACAGGCTGGAAAcc < 1:17428623/35‑1 (MQ=255) tttGGTGAAAATGGCAGTAACAAAGGCTGGAAAcc < 1:5569115/35‑1 (MQ=255) tGGTTAAAATGGCAGTAACACAGGCTGGAAACCTa < 1:15430979/35‑1 (MQ=255) tGGTGAAAATGGCAGTAACACAGGCTGGAAACCTa < 1:258855/35‑1 (MQ=255) tGGTGAAAATGGCAGTAACACAGGCTGGAAACCTa < 1:15727307/35‑1 (MQ=255) tGGTGAAAATGGCAGTAACACAGGCTAGAAACCTa < 1:16980690/35‑1 (MQ=255) ggTGAAAATGGCAGTAACACAGGCTGGAAACCTaa < 1:15160/35‑1 (MQ=255) gTGAAAATGGCAGTAACACAGGCTGGAAACCTAAt < 1:17309816/35‑1 (MQ=255) tGAAAATTGCAGTAACACAGGCTGGGAACCTAAtt > 1:7158787/1‑35 (MQ=38) gAAAATGGCAGTAACACAGGCTGGAAACCTAAttt < 1:10533893/35‑1 (MQ=255) aaaaTGGCAGTAACACAGGCTGGAAACCTAAtttt < 1:8284436/35‑1 (MQ=255) aaaTGGCAGTAACACAGGCTGGAAACCTAAttttt < 1:19952323/35‑1 (MQ=255) aaaTGGCAGTAACACAGGCTGGAAACCTAAttttt < 1:619988/35‑1 (MQ=255) | AGCCTTTGATATGCTGGGCTTTGCCATTTGGTGAAAATGGCAGTAACACAGGCTGGAAACCTAATTTTT > REL606/1743447‑1743515 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |