New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 370831 = | 66 (0.640) | 3 (0.050) | 3/28 | NT | 8.4% | intergenic (+23/‑96) | phoA/psiF | bacterial alkaline phosphatase/hypothetical protein |
? | REL606 | 4533970 = | 27 (0.450) | coding (156/1461 nt) | uxuB | D‑mannonate oxidoreductase, NAD‑binding |
CATTAAGTCTGGTTGCTAACAGCAAAAAAACCACCCGACAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/370874‑370831 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgacagcgaCTGGGGCATCTGCGAAGTTAACCTGATGCCAGGC > REL606/4533970‑4534003 CATTAAGTCTGGTTGCTAACAGCAAAAAAACCACC > 1:537358/1‑35 CATTAAGTCTGGTTGCTAACAGCAAAAAAACCACC > 1:12895696/1‑35 CATTAAGTCTGGTTGCTAACAGCAAAAAAACCACC > 1:6471777/1‑35 CATTAAGTCTGGTTGCTAACAGCAAAAAAACCACC > 1:19389246/1‑35 ATTAAGTCTGGTTGCTAACAGCAAAAAAACCACCC < 1:5181343/35‑1 ATTAAGTCTGGTTGCTAACAGCAAAAAAACCACCC > 1:3999746/1‑35 TTAATTCTGGTTGCTAACAGCAAAAAAACCACCCG > 1:333716/1‑35 TTAAGTCTGGTTGCTAACAGCAAAAAAACCACCCG > 1:8387452/1‑35 TTAAGTCTGGTTGCTAACAGCAAAAAAACCACCCG < 1:7479374/35‑1 TTAAGTCTGGTTGCTAACAGCAAAAAAACCACCCG > 1:19491651/1‑35 TTAAGTCTGGTTGCTAACAGCAAAAAAACCACCCG < 1:20277189/35‑1 TAAGTCTGGTTGCTAACAGCAAAAAAACCACCCGA > 1:20609364/1‑35 TAAGTCTGGTTGCTAACAGCAAAAAAACCACCCGA > 1:18402093/1‑35 TAAGTCTGGTTGCTAACAGCAAAAAAACCACCCGA < 1:14108154/35‑1 aaaTCTGGTTGCTAACAGCAAAAAAACCACCCGAC < 1:12594384/32‑1 AAGTCTGGTTGCTAACAGCAAAAAAACCACCCGAC > 1:11230759/1‑35 AAGTCTGGTTGCTAACAGCAAAAAAACCACCCGAC > 1:4396325/1‑35 AAGTCTGGTTGCTAACAGCAAAAAAACCACCCGAC < 1:17116738/35‑1 AAGTCTGGTTGCTAACAGCAAAAAAACCACCCGAC > 1:9740277/1‑35 AGTCTGGTTGCTAACAGCAAAAAAACCACCCGACA < 1:2175065/35‑1 AGTCTGGTTGCTAACAGCAAAAAAACCACCCGACA > 1:18686072/1‑35 AGTCTGGTTGCTAACAGCAAAAAAACCACCCGACA < 1:17770038/35‑1 AGTCTGGTTGCTAACAGCAAAAAAACCACCCGACA < 1:794875/35‑1 AGTCTGGTTGCTAACAGCAAAAAAACCACCCGACA < 1:9649292/35‑1 AGTCTGGTTGCTAACAGCAAAAAAACCACCCGACA < 1:9497329/35‑1 AGTCTGGTTGCTAACAGCAAAAAAACCACCCGACA < 1:8901480/35‑1 GTCTGGTTGCTAACAGCAAAAAAACCACCCGACAG < 1:1657994/35‑1 GTCTGGTTGCTAACAGCAAAAAAACCACCCGACAG < 1:13640011/35‑1 GTCTGGTTGCTAACAGCAAAAAAACCACACGACAG < 1:15284493/35‑1 CTGGTTGCTAACAGCAAAAAAACCACCCGACAGCG > 1:18366350/1‑35 CTGGTTGCTAACAGCAAAAAAACCACCCGACAGCG > 1:12805312/1‑35 TGGTTGCTAACAGCAAAAAAACCACCCGACAGCGA > 1:14251567/1‑35 TGGTTGCTAACAGCAAAAAAACCACCCGACAGCGA > 1:15897867/1‑35 TGGTTGCTAACAGCAAAAAAACCACCCGACAGCGA > 1:12095561/1‑35 AAAACCCCCCGACAGCGACTGGGGCATCTGCGAAG < 1:11477547/35‑1 AAACCCCCCGACAGCGACTGGGGCATCTGCGAAGT < 1:8101715/35‑1 AACCCCCCGACAGCGACTGGGGCATCTGCGAAGTT < 1:11891280/35‑1 cccCCCGACAGCGACTGGGGCATCTGCGAAGTTAA < 1:16723651/32‑1 ccCCCGACAGCGACTGGGGCATCTGCGAAGTTAAC < 1:5421707/33‑1 ccCCCGACAGCGACTGGGGCATCTGCGAAGTTAAC < 1:11621065/33‑1 ccCCCGACAGCGACTGGGGCATCTGCGAAGTTAAC < 1:17031703/33‑1 ccCCCGACAGCGACTGGGGCATCTGCGAAGTTAAC < 1:1338585/33‑1 cCCCGACAGCGACTGGGGCATCTGCGAAGTTAACC < 1:5892746/34‑1 cCCCGACAGCGACTGGGGCATCTGCGAAGTTAACC < 1:7355381/34‑1 cCCCGACAGCGACTGGGGCATCTGCGAAGTTAACC < 1:3015760/34‑1 CCCGACAGCGACTGGGGCATCTGCGAAGTTAATCT < 1:4076519/35‑1 caGACAGCGACTGGGGCATCTGCGAAGTTAACCTG < 1:7887687/33‑1 CCGCCAGCGACTGGGGCATCTGCGAAGTTAACCTG < 1:2040954/35‑1 CCGACAGCGACTGGGGCATCTGCGAAGTTAACCTG < 1:13641741/35‑1 CCGACAGCGACTGGGGCATCTGCGAAGTTAACCTG > 1:6139652/1‑35 CCGACAGCGACTGGGGCATCTGCGAAGTTAACCTG < 1:6427595/35‑1 CCGACAGCGACTGGGGCATCTGCGAAGTTAACCTG < 1:283572/35‑1 CCGACAGCGACTGGGGCATCTGCGAAGTTAACCTG > 1:18616039/1‑35 cgcCAGCGACTGGGGCATCTGCGAAGTTAACCTGA < 1:6750503/32‑1 CGACAGCGACTGGGGCATCTGCGAAGTTAACCTGA < 1:9071574/35‑1 CGACAGCGACTGGGGCATCTGCGAAGTTAACCTGA > 1:9629643/1‑35 CGACAGCGACTGGGGCATCTGCGAAGTTAACCTGA > 1:11068150/1‑35 CGACAGCGACTGGGGCATCTGCGAAGTTAACCTGA > 1:8737902/1‑35 CGACAGCGACTGGGGCATCTGCGAAGTTAACCTGA > 1:10462819/1‑35 GACAGCGGCTGGGGCATCTGCGAAGTTAACCTGAT < 1:5813243/35‑1 GACAGCGACTGGGGCATCTGCGAAGTTAACCTGAT < 1:17276307/35‑1 GACAGCGACTGGGGCATCTGCGAAGTTAACCTGAT < 1:6979392/35‑1 GACAGCGACTGGGGCATCTGCGAAGTTAACCTGAT < 1:7061161/35‑1 GACAGCGACTGGGGCATCTGCGAAGTTAACCTGAT < 1:19483399/35‑1 ACAGCGACTGGGGCATCTGCGAAGTTAACCTGATG > 1:16026546/1‑35 ACAGCGACTGGGGCATCTGCGAAGTTAACCTGATG > 1:18577186/1‑35 CAGCGACTGGGGCATCTGCGAAGTTGACCTGATGC > 1:17194130/1‑35 CAGCGACTGGGGCATCTGCGAAGTTAACCTGATGC < 1:6167700/35‑1 CAGCGACTGGGGCATCTGCGAAGTTAACCTGATGC < 1:10113770/35‑1 CAGCGACTGGGGCATCTGCGAAGTTAACCTGATGC > 1:10964908/1‑35 AGCGACTGGGGCATCTGCGAAGTTAACCTGATGCC > 1:11755400/1‑35 AGCGACTGGGGCATCTGCGAAGTTAACCTGATGCC > 1:2843641/1‑35 AGCGACTGGGGCATCTGCGAAGTTAACCTGATGCC > 1:14308570/1‑35 AGCGACTGGGGCATCTGCGAAGTTAACCTGATGCC > 1:16682704/1‑35 GCGACTGGGGCATCTGCGAAGTTAACCTGATGCCA < 1:4716444/35‑1 GCGACTGGGGCATCTGCGAAGTTAACCTGATGCCA < 1:3655244/35‑1 GCGACTGGGGCATCTGCGAAGTTAACCTGATGCCA > 1:20208747/1‑35 GCGACTGGGGCATCTGCGAAGTTAACCTGATGCCA < 1:19236408/35‑1 CGACTGGGGCATCTGCGAAGTTAACGTGATGCCAG < 1:5096554/35‑1 CGACTGGGGCATCTGCGAAGTTAACCTGATGCCAG < 1:9762324/35‑1 CGACTGGGGCATCTGCGAAGTTAACCTGATGCCAG < 1:16794470/35‑1 CGACTGGGGCATCTGCGAAGTTAACCTGATGCCAG < 1:5519072/35‑1 GACTGGGGCATCTGCGAAGTTAACCTGATGCCAGG < 1:17902915/35‑1 GACTGGGGCATCTGCGAAGTTAACCTGATGCCAGG > 1:18919941/1‑35 GACTGGGGCATCTGCGAAGTTAACCTGATGCCAGG > 1:7949074/1‑35 GACTGGGGCATCTGCGAAGTTAACCTGATGCCAGG < 1:20540004/35‑1 GACTGGGGCATCTGCGAAGTTAACCTGATGCCAGG > 1:12566317/1‑35 GACTGGGGCATCTGCGAAGTTAACCTGATGCCAGG > 1:2948459/1‑35 GACTGGGGCATCTGCGAAGTTAACCTGATGCCAGG > 1:116778/1‑35 GACTGGGGCATCTGCGAAGTTAACCTGATGCCAGG > 1:5329754/1‑35 ACTGGGGCATCTGCGAAGTTAACCTGATGCCAGGC > 1:6832221/1‑35 ACTGGGGCATCTGCGAAGTTAACCTGATGCCAGGC > 1:11900254/1‑35 ACTGGGGCATCTGCGAAGTTAACCTGATGCCAGGC > 1:9586683/1‑35 ACTGGGGCATCTGCGAAGTTAACCTGATGCCAGGC < 1:11161269/35‑1 ACTGGGGCATCTGCGAAGTTAACCTGATGCCAGGC > 1:5373693/1‑35 CATTAAGTCTGGTTGCTAACAGCAAAAAAACCACCCGACAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/370874‑370831 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgacagcgaCTGGGGCATCTGCGAAGTTAACCTGATGCCAGGC > REL606/4533970‑4534003 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |