New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1335926 | 52 (0.510) | 11 (0.170) | 5/30 | NT | 18.7% | coding (1724/2676 nt) | acnA | aconitate hydratase |
? | REL606 | = 2863313 | 63 (0.980) | coding (285/531 nt) | ygdP | dinucleoside polyphosphate hydrolase |
Only 100 of 113 total aligned reads displayed.
CGGGAAATATGAATATCAACCTGGCTTCTGAGCCTATCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1335884‑1335926 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatcggccaAAAACAAAAATGGTTTCTCTTGCAGCTGGTGAGC < REL606/2863313‑2863280 CGGGAAATATGAATATCAACCTGGCTTCTGAGCCT > 1:18606763/1‑35 CGGGAAATATGAATATCAACCTGGCTTCTGAGCCT > 1:11281469/1‑35 CGGGAAATATGAATATCAACCTGGCTTCTGAGCCT < 1:19628606/35‑1 CGGGAAATATGAATATCAACCTGGCTTCTGAGCCT > 1:15528826/1‑35 CGGGAAATATCAATATCAACCTGGCTTCTGAGCCT < 1:10982209/35‑1 GGGAAATATGAATATCAACCTGGCTTCTGAGCCTA > 1:11282403/1‑35 GGGAAATATGAATATCAACCTGGCTTCTGAGCCTA < 1:16630591/35‑1 GGAAATATGAATATCAACCTGGCTTCTGAGCCTAT < 1:9904265/35‑1 GGAAATATGAATATCAACCTGGCTTCTGAGCCTAT > 1:16653002/1‑35 GGAAATATGAATATCAACCTGGCTTCTGAGCCTAT > 1:18867924/1‑35 GGAAATATGAATATCAACCTGGCTTCTGAGCCTAT < 1:17048441/35‑1 GAAATATGAATATCAACCTGGCTTCTGAGCCTATt > 1:19441869/1‑34 GAAATATGAATATCAACCTGGCTTCTGAGCCTATC < 1:17209793/35‑1 GAAATATGAATATCAACCTGGCTTCTGAGCCTATC < 1:13651905/35‑1 GAAATATGAATATCAACCTGGCTTCTGAGCCTATC < 1:914295/35‑1 GAAATATGAATATCAACCTGGCTTCTGAGCCTATC > 1:2683756/1‑35 GAAATATGAATATAAACCTGGCTTCTGAGCCTATC < 1:8910061/35‑1 AAATATGAATATCAACCTGGCTTCTGAGCCTATCG > 1:13294302/1‑35 AAATATGAATATCAACCTGGCTTCTGAGCCTATCG < 1:2999114/35‑1 AAATATGAATATCAACCTGGCTTCTGAGCCTATCG > 1:16376850/1‑35 AAATATGAATATCAACCTGGCTTCTGAGCCTATCG < 1:14512485/35‑1 AAATATGAATATCAACCTGGCTTCTGAGCCTATCG > 1:3649590/1‑35 nATATGAATATCAACCTGGCTTCTGAGCCTATCGG > 1:9007423/2‑35 AATATGAATATCAACCTGGCTTCTGAGCCTATCGG < 1:15550058/35‑1 AATATGAATATCAACCTGGCTTCTGAGCCTATCGG < 1:16632737/35‑1 AATATGAATATCAACCTGGCTTCTGAGCCTATCGG > 1:16933613/1‑35 AATATGAATATCAACCTGGCTTCTGAGCCTATCGG < 1:4977603/35‑1 AATATGAATATCAACCTGGCTTCTGAGCCTATCGG < 1:1364488/35‑1 AATATGAATATCAACCTGGCTTCTGAGCCTATCGG > 1:12869908/1‑35 AATATGAATATCAACCTGGCTTCTGAGCCTATCGG > 1:3915386/1‑35 ATATTAATATCAACCTGGCTTCTGAGCCTATCGGC > 1:13536287/1‑35 ATATGAATATCAACCTGGCTTCTGAGCCTATCGGC > 1:8122980/1‑35 ATATGAATATCAACCTGGCTTCTGAGCCTATCGGC > 1:318933/1‑35 ATATGAATATCAACCTGGCTTCTGAGCCTATCGGC > 1:5702937/1‑35 ATATGAATATCAACCTGGCTTCTGAGCCTATCGGC > 1:108422/1‑35 TATGAATATCAACCTGTCTTCTGAGCCTATCGGCC > 1:7710985/1‑35 TATGAATATCAACCTGGCTTCTGAGCCTATCGGCC < 1:16908851/35‑1 TATGAATATCAACCTGGCTTCTGAGCCTATCGGCC < 1:1342952/35‑1 TATGAATATCAACCTGGCTTCTGAGCCTATCGGCC > 1:528603/1‑35 TATGAATATCAACCTGGCTTCTGAGCCTATCGGCC < 1:15164955/35‑1 TATGAATATCAACCTGGCTTCTGAGCCTATCGGCC > 1:7430883/1‑35 ATGAATATCAACCTGGCTTCTGAGTCTATCGGCCA > 1:16902748/1‑35 ATGAATATCAACCTGGCTTCTGAGCCTATCGGCCA > 1:19104400/1‑35 TGAATATCAACCTGGCTTCTGAGCCTATCGGCCAA > 1:20276820/1‑35 TGAATATCAACCTGGCTTCTGAGCCTATCGGCCAA > 1:8389083/1‑35 TGAATATCAACCTGGCTTCTGAGCATATCGGCCAA > 1:17537086/1‑35 GAATATCAACCTGGCTTCTGAGCCTCTCGGCCAAA > 1:1198564/1‑35 GAATATCAACCTGGCTTCTGAGCCTATCGGCCAAA > 1:455294/1‑35 GAATATCAACCTGGCTTCTGAGCCTATCGGCCAAA > 1:18948172/1‑35 AATATCAACCTGGCTTCTGAGCCTATCGGCCAAAA > 1:16224850/1‑35 AATATCAACCTGGCTTCTGAGCCTATCGGCCAAAA > 1:6906230/1‑35 AATATCAACCTGGCTTCTGAGCCTATCGGCCAAAA > 1:8209961/1‑35 ATATCAACCTGGCTTCTGAGCCTATCGGCCAAAAA > 1:8505782/1‑35 ATATCAACCTGGCTTCTGAGCCTATCGGCCAAAAA > 1:18099676/1‑35 TATCAACCTGGCTTCTGAGCCTATCGGCCAAAAAa > 1:14403607/1‑34 ATCAACCTGGCTTCTGAGCCTATCGGCCAAAAAag > 1:1832644/1‑33 ATCAACCTGGCTTCTGAGCCTATCGGCCAAAAACA > 1:19849716/1‑35 TCAACCTGGCTTCTGAGCCTATCGGCCAAAAAAAA > 1:4909589/1‑35 CAACCTGGCTTCTGAGCCTATCGGCCAAAAAAAAA > 1:2809660/1‑35 AACCTGGCTTCTGAGCCTATCGGCCAAAAAAAAAA > 1:13953727/1‑35 AACCTGGCTTCTGAGCCTATCGGCCAAAAAAAAAA > 1:9012896/1‑35 ACCTGGCTTCTGAGCCTATCGGCCAAAAAAAAAAA > 1:20517051/1‑35 ACCTGGCTTCTGAGCCTATCGGCCAAAAAAAAAAA > 1:10599462/1‑35 ACCTGGCTTCTGAGCCTATCGGCCAAAAAAAAAAA > 1:8112101/1‑35 CCTGGCTTCTGAGCCTATCGGCCAAAAAAAAAAAa > 1:942661/1‑34 TATCGGCCAAAAACAAAAATGGTTTCTCTTGCAGC < 1:2064640/35‑1 TATCGGCCAAAAACAAAAATGGTTTCTCTTGCAGC < 1:13027946/35‑1 ATCGGCCAAAAACAAAAATGGTTTCTCTTGCAGCT > 1:307728/1‑35 ATCGGCCAAAAACAAAAATGGTTTCTCTTGCAGCT > 1:2171654/1‑35 ATCGGCCAAAAACAAAAATGGTTTCTCTTGCAGCT < 1:186488/35‑1 ATCGGCCAAAAACAAAAATGGTTTCTCTTGCAGCT > 1:15353073/1‑35 TCGGCCAAAAACAAAAATGGTTTCTCTTGCAGCTG > 1:9792742/1‑35 TCGGCCAAAAACAAAAATGGTTTCTCTTGCAGCTG < 1:1936127/35‑1 CGGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGG > 1:5993279/1‑35 CGGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGG < 1:428840/35‑1 CGGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGG > 1:2518026/1‑35 CGGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGG > 1:20333113/1‑35 CGGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGG < 1:17788534/35‑1 CGGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGG < 1:15316995/35‑1 CGGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGG < 1:14418622/35‑1 CGGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGG < 1:11869030/35‑1 GGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGGa > 1:6574125/1‑34 GGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGGT > 1:9954162/1‑35 GGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGGT < 1:5813674/35‑1 GGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGGT < 1:5685002/35‑1 GGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGGT > 1:12080486/1‑35 GGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGGT < 1:2001008/35‑1 GCCAAAAACAAAAATGGTTTCTCTTGCAGCTGGTG < 1:2638767/35‑1 GCCAAAAACAAAAATGGTTTCTCTTGCAGCTGGTG < 1:20414368/35‑1 CCAAAAACAAAAATGGTTTCTCTTGCAGCTGGTGA < 1:10022406/35‑1 CCAAAAACAAAAATGGTTTCTCTTGCAGCTGGTGA < 1:161321/35‑1 CCAAAAACAAAAATGGTTTCTCTTGCAGCTGGTGA > 1:18376650/1‑35 CCAAAAACAAAAATGGTTTCTCTTGCAGCTGGTGA > 1:5405484/1‑35 CAAAAACAAAAATGGTTTCTCTTGCAGCTGGTGAG > 1:4203539/1‑35 CAAAAACAAAAATGGTTTCTCTTGCAGCTGGTGAG < 1:13219610/35‑1 AAAAGCAAAAATGGTTTCTCTTGCAGCTGGTGAGC < 1:18907151/35‑1 AAAAACAAAAATGGTTTCTCTTGCAGCTGGTGAGC < 1:15782286/35‑1 AAAAACAAAAATGGTTTCTCTTGCAGCTGGTGAGC < 1:4441756/35‑1 AAAAACAAAAATGGTTTCTCTTGCAGCTGGTGAGC > 1:11482660/1‑35 AAAAACAAAAATGGTTTCTCTTGCAGCTGGTGAGC < 1:10291850/35‑1 CGGGAAATATGAATATCAACCTGGCTTCTGAGCCTATCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1335884‑1335926 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatcggccaAAAACAAAAATGGTTTCTCTTGCAGCTGGTGAGC < REL606/2863313‑2863280 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |