New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3686152 | 55 (0.540) | 7 (0.070) | 3/46 | NT | 10.7% | coding (410/741 nt) | yiaT | hypothetical protein |
? | REL606 | = 4031953 | 64 (0.650) | intergenic (+238/+174) | hemN/glnG | coproporphyrinogen III oxidase/fused DNA‑binding response regulator in two‑component regulatory system with GlnL: response regulator/sigma54 interaction protein |
Only 100 of 113 total aligned reads displayed.
CAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCG > REL606/4031919‑4031987 | cAATCATTGCGGCACACAGCACGGCAGCAACGGCa > 1:3877999/1‑35 (MQ=255) cAATCATTGCGGCACACAGCACGGCAGCAACGGCa < 1:12060096/35‑1 (MQ=255) aaTCATTGCGGCACACAGCACGGCAGGAAAGGCAg > 1:3924694/1‑35 (MQ=25) aaTCATTGCGGCACACAGCACGGCAGCAACGGCAg < 1:16391651‑M2/35‑2 (MQ=255) aaTCATTGCGGCACACAGCACGGCAGCAACGGCAg < 1:19367888‑M2/35‑2 (MQ=255) aaTCATTGCGGCACACAGCACGGCAGCAACGGCAg < 1:10761643‑M2/35‑2 (MQ=255) aaTCATGGCGGCACACAGCGCGGCAGCAACGGCAg < 1:8539847/35‑1 (MQ=25) aTCATTGCGGCACACAGCACGGCAGCAACGGCAgg < 1:18283994‑M2/35‑3 (MQ=255) aTCATTGCGGCACACAGCACGGCAGCAACGGCAGt < 1:15209822/35‑1 (MQ=255) aTCATTGCGGCACACAGCACGGCAGCAACGGCAGt < 1:1209836/35‑1 (MQ=255) cATTGCGGCACACAGCACGGCAGCAACGGCCgggg < 1:19018751‑M2/35‑5 (MQ=255) cATTGCGGCACACAGCACGGCAGCAACGGCAGttt < 1:18035188/35‑1 (MQ=255) cATTGCGGCACACAGCACGGCAGCAACGGCAGttt < 1:12430386/35‑1 (MQ=255) cATTGCGGCACACAGCACGGCAGCAACGGCAGttt < 1:3851963/35‑1 (MQ=255) cATTGCGGCACACAGCACGGCAGCAACGGCAGttt < 1:233719/35‑1 (MQ=255) cATTGCGGCACACAGCACGGCAGCAACGGCAGttt < 1:10468584/35‑1 (MQ=255) cATTGCGGCACACAGCACGGCAGCAACGGCAGttt < 1:19852048/35‑1 (MQ=255) aTTGCGGCACACAGCACGGCAGCAACGGCAGTTTg < 1:5255415/35‑1 (MQ=255) aTTGCGGCACACAGCACGGCAGCAACCGCAGGTTg > 1:1781779/1‑35 (MQ=25) ttGCGGCACACAGCACGGCAGCAACGGCAgggggg < 1:806310‑M2/35‑7 (MQ=255) ttGCGGCACACAGCACGGCAGCAACGGCAgggggg < 1:10642301‑M2/35‑7 (MQ=255) ttGCGGCACACAGCACGGCAGCAACGGCAGTTTGc < 1:3933476/35‑1 (MQ=255) tGCGGCACACAGCACGGCAGCAACGGCAggggggg < 1:7530558‑M2/35‑8 (MQ=255) gCGGCACACAGCACGGCAGCAACGGCAgggggggg < 1:6030464‑M2/35‑9 (MQ=255) gCGGCACACAGCACGGCAGCAACGGCAGTTTGCgg < 1:3392484/35‑1 (MQ=255) cGGCACACAGCACGGCAGCAACGGCAgggtggggg < 1:20033640‑M2/35‑10 (MQ=255) cGGCACACAGCACGGCAGCAACGGCAgggtggggg < 1:1885187‑M2/35‑10 (MQ=255) cGGCACACAGCACGGCAGCAACGGCAggggggggg < 1:14410961‑M2/35‑10 (MQ=255) cGGCACACAGCACGGCAGCAACGGCAggggggggg < 1:10378141‑M2/35‑10 (MQ=255) cGGCACACAGCACGGCAGCAACGGCAGTTTGCGgt < 1:18789166/35‑1 (MQ=255) cGGCACACAGCACGGCAGCAACGGCAGTTTGCGgt < 1:935936/35‑1 (MQ=255) gCACACAGCACGGCAGCAACGGCAgggtggggggt < 1:2349439‑M2/35‑12 (MQ=255) cacacaGCACGGCAGCAACGGCAGTTTGCGgtgtg < 1:7880212/35‑1 (MQ=255) acacaGCGCGGCAGCAACGGCAGTTTGCGgtgtgt < 1:1611627/35‑1 (MQ=255) acacaGCACGGCAGCAACGGCAGTTTGCGgtgtgt < 1:12698359/35‑1 (MQ=255) acacaGCACGGCAGCAACGGCAGTTTGCGgtgtgt < 1:2623265/35‑1 (MQ=255) acacaGCACGGCAGCAACGGCAGTTTGCGgtgtgt < 1:8011380/35‑1 (MQ=255) cacaGCACGGCAGCAACGGCAGTTTGCGGtgtgtg < 1:2303452/35‑1 (MQ=255) cacaGCACGGCAGCAACGGCAGTTTGCGGtgtgtg < 1:2001146/35‑1 (MQ=255) cacaGCACGGCAGCAACGGCAGTTTGCGGtgtgtg < 1:10237455/35‑1 (MQ=255) acaGCACGGCAGCAACGGCAGTTTGCGGTGTGTgg < 1:7401639/35‑1 (MQ=255) acaGCACGGCAGCAACGGCAGTTTGCGGTGTGTgg < 1:7723742/35‑1 (MQ=255) acaCCACGGCAGCAACGGCAGTTTGCGGTGTGTgg < 1:14659935/35‑1 (MQ=255) caGCCCGGCAGCAACGGCAGTTTGCGGTGTGTGGc < 1:3274086/35‑1 (MQ=255) aGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCt < 1:18136954/35‑1 (MQ=255) aGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCt < 1:14256478/35‑1 (MQ=255) aGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCt < 1:2122677/35‑1 (MQ=255) gCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTg < 1:6767603/35‑1 (MQ=255) gCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTg < 1:5253851/35‑1 (MQ=255) gCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTg < 1:16320476/35‑1 (MQ=255) aCGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTc < 1:3862644/35‑1 (MQ=255) aCGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTc < 1:8716859/35‑1 (MQ=255) aCGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTc < 1:2422566/35‑1 (MQ=255) aCGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTc < 1:14907781/35‑1 (MQ=255) aCGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTc < 1:1460803/35‑1 (MQ=255) aCGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTc < 1:13147478/35‑1 (MQ=255) aCGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTc < 1:20235008/35‑1 (MQ=255) cGGCAGCACCGGCAGTTTGCGGTGTGTGGCTGTCa < 1:20307472/35‑1 (MQ=255) cGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCa < 1:11277468/35‑1 (MQ=255) cGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCa < 1:14804650/35‑1 (MQ=255) cGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCa < 1:12165314/35‑1 (MQ=255) ggCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCaa < 1:1132597/35‑1 (MQ=255) gcagcaACGGCAGTTTGCGGTGTGTGGCTGTCAAc < 1:7105290/35‑1 (MQ=255) gcagcaACGGCAGTTTGCGGTGTGTGGCTGTCAAc < 1:254329/35‑1 (MQ=255) cagcaACGGCAGTTTGCGGTGTGTGGCTGTCAACt < 1:13752860/35‑1 (MQ=255) cagcaACGGCAGTTTGCGGTGTGTGGCTGTCAACt < 1:3392425/35‑1 (MQ=255) cagcaACGGCAGTTTGCGGTGTGTGGCTGTCAACt < 1:9334136/35‑1 (MQ=255) cagcaACGGCAGTTTGCGGTGTGTGGCTGTCAACt < 1:16152083/35‑1 (MQ=255) cagcaACGGCAGTTTGCGGTGTGTGGCTGTCAACt < 1:5180759/35‑1 (MQ=255) agcaACGGCAGTTTGCGGTGTGTGGCTGTCAGCTg < 1:14627922/35‑1 (MQ=255) agcaACGGCAGTTTGCGGTGTGTGGCTGTCAACTg < 1:12869394/35‑1 (MQ=255) agcaACGGCAGTTTGCGGTGTGTGGCTGTCAACTg < 1:7247751/35‑1 (MQ=255) agcaACGGCAGTTTGCGGTGTGTGGCTGTCAACTg < 1:11467794/35‑1 (MQ=255) agcaACGGCAGTTTGCGGTGTGTGGCTGTCAACTg < 1:2294901/35‑1 (MQ=255) agcaACGGCAGTTTGCGGTGTGTGGCTGTCAACTg < 1:15207006/35‑1 (MQ=255) gcaACGGCAGTTTGCGGTGTGTGGCTGTCAACTgc < 1:11153812/35‑1 (MQ=255) gcaACGGCAGTTTGCGGTGTGTGGCTGTCAACTgc < 1:12432841/35‑1 (MQ=255) gcaACGGCAGTTTGCGGTGTGTGGCTGTCAACTgc < 1:16510835/35‑1 (MQ=255) taaCGGCAGTTTGCGGTGTGTGGCTGTCAACTgcg < 1:2430897/34‑1 (MQ=255) caACGGCAGTTTGCGGTGTGTGGCTGTCAACTgcg < 1:8698206/35‑1 (MQ=255) caACGGCAGTTTGCGGTGTGTGGCTGTCAACTgcg < 1:1574645/35‑1 (MQ=255) aaCGGCAGTTTGCGGTGTGTGGCTGTCAACTgcgc < 1:9345952/35‑1 (MQ=255) aaCGGCAGTTTGCGGTGTGTGGCTGTCAACTgcgc < 1:16080096/35‑1 (MQ=255) aaCGGCAGTTTGCGGTGTGTGGCTGTCAACTgcgc < 1:804866/35‑1 (MQ=255) aCGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGcc < 1:5468463/35‑1 (MQ=255) cGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCa < 1:17915905/35‑1 (MQ=255) ggCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCAc < 1:8217281/35‑1 (MQ=255) ggCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCAc < 1:1036477/35‑1 (MQ=255) ggCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCAc < 1:6523657/35‑1 (MQ=255) gCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACt < 1:4762311/35‑1 (MQ=255) gCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACt < 1:5561063/35‑1 (MQ=255) gCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACt < 1:7204022/35‑1 (MQ=255) cAGTTTGCGGTGTGTGGCTGTCACCTGCGCCACTc < 1:1394880/35‑1 (MQ=255) cAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTc < 1:4776417/35‑1 (MQ=255) cAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTc < 1:16092833/35‑1 (MQ=255) cAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTc < 1:9197445/35‑1 (MQ=255) cAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTc < 1:6349894/35‑1 (MQ=255) aGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCg < 1:12619032/35‑1 (MQ=255) aGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCg < 1:10351937/35‑1 (MQ=255) aGTTTGCGGTGTGTGGCTGTCAACTGCGCAACTCg < 1:9123811/35‑1 (MQ=255) | CAATCATTGCGGCACACAGCACGGCAGCAACGGCAGTTTGCGGTGTGTGGCTGTCAACTGCGCCACTCG > REL606/4031919‑4031987 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |