Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 2,448,493 | IS186 (+) +6 bp | 66.5% | intergenic (+24/+21) | nupC → / ← yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2448493 = | 30 (0.470) | 59 (0.660) | 32/42 | NT | 58.4% | intergenic (+24/+26) | nupC/yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
? | REL606 | = 2774196 | NA (NA) | noncoding (1343/1343 nt) | IS186 | repeat region | |||||
* | ? | REL606 | = 2448498 | 32 (0.500) | 64 (0.710) | 34/42 | NT | 58.8% | intergenic (+29/+21) | nupC/yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
? | REL606 | 2772854 = | NA (NA) | noncoding (1/1343 nt) | IS186 | repeat region |
Only 100 of 162 total aligned reads displayed.
GGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTA > REL606/2772820‑2772883 | ggCGCGGGGAACACCCTGAACGGTGGGGAAAAAcc > 1:11391514/1‑35 (MQ=255) gcgcGGGGAACACCCTGAACGGTGGGGAAAAAccc > 1:2721636/1‑35 (MQ=255) gcgcGGGGAACACCCTGAACGGTGGGGAAAAAccc > 1:12745510/1‑35 (MQ=255) gcgcGGGGAACACCCTGAACGGTGGGGAAAAAccc > 1:1181460/1‑35 (MQ=255) gcgcGGGGAACACCCTGAACGGTGGGGAAAAAccc < 1:7856019/35‑1 (MQ=255) cgcgGGGAACACCCTGAACGGTGGGGAAAAAcccc > 1:19209884/1‑35 (MQ=255) cgcgGGGAACACCCTGAACGGTGGGGAAAAAcccc > 1:3054139/1‑35 (MQ=255) cgcgGGGAACACCCTGAACGGTGGGGAAAAAcccc < 1:17702286/35‑1 (MQ=255) cgcgGGGAACACCCTGAACGGTGGGGAAAAAcccc < 1:13421053/35‑1 (MQ=255) gcgGGGACCAACCTGAACGGTGGGGAAAAACCCCa < 1:2396188/35‑1 (MQ=37) gcgGGGAACACCCTGAACGGTGGGGAAAAAcccag > 1:196088/1‑33 (MQ=255) gcgGGGAACACCCTGAACGGTGGGGAAAAACCCCa < 1:18059795/35‑1 (MQ=255) gcgGGGAACACCCTGAACGGTGGGGAAAAACCCCa > 1:3507069/1‑35 (MQ=255) gcgGGGAACACCCTGAACGGTGGGGAAAAACCCCa > 1:11615539/1‑35 (MQ=255) gcgGGGAACACCCTGAACGGTGGGGAAAAACCCCa > 1:10476094/1‑35 (MQ=255) cgGGGAACACCCTGAACGGTGGGGAAAAACCCCAt > 1:4746353/1‑35 (MQ=255) cgGGGAACACCCTGAACGGTGGGGAAAAACCCCAt > 1:17159487/1‑35 (MQ=255) cgGGGAACACCCTGAACGGTGGGGAAAAACCCCAt < 1:7193024/35‑1 (MQ=255) ggggAACACCCTGAACGGTGGGGAAAAACCCCATa < 1:12590956/35‑1 (MQ=255) ggggAACACCCTGAACGGTGGGGAAAAACCCCATa > 1:360224/1‑35 (MQ=255) ggggAACACCCTGAACGGTGGGGAAAAACCCCATa > 1:16351504/1‑35 (MQ=255) ggAACACCCTGAACGGTGGGGAAAAACCCCATAAg < 1:16183188/35‑1 (MQ=255) gAACACCCTGAACGGTGGGGAAAAACCCCATAAgc < 1:19952754/35‑1 (MQ=255) aaCACCCTGAACGGTGGGG‑AAAACCCCATAAgcgc < 1:3150767/35‑1 (MQ=37) aaCACACTGAACGGTGGGGAAAAACCCCATAAgcg > 1:7562416/1‑35 (MQ=255) acacCCTGAACGGTGGGGAAAAACCCCATAAgcgc < 1:5854637/35‑1 (MQ=255) acacCCTGAACGGTGGGGAAAAACCCCATAAgcgc < 1:6240313/35‑1 (MQ=255) acacCCTGAACGGTGGGGAAAAACCCCATAAgcgc > 1:12927828/1‑35 (MQ=255) acacCCTGAACGGTGGGGAAAAACCCCATAAgcgc > 1:1357057/1‑35 (MQ=255) cacCCTGAACGGTGGGGAAAAACCCCATAAGCGCt < 1:20196423/35‑1 (MQ=255) cacCCTGAACGGTGGGGAAAAACCCCATAAACGCt > 1:13866599/1‑35 (MQ=255) acCCTGAACGGTGGGGAAAAACCCCATAAGCGCTa < 1:19897573/35‑1 (MQ=255) cccTGAACGGTGGGGAAAAACCCCATAAGCGCTaa < 1:3454486/35‑1 (MQ=255) cccTGAACGGTGGGGAAAAACCCCATAAGCGCTaa < 1:10193548/35‑1 (MQ=255) cccTGAACGGTGGGGAAAAACCCCATAAGCGCTaa < 1:595185/35‑1 (MQ=255) cccTGAACGGTGGGGAAAAACCCCATAAGCGCTaa < 1:911404/35‑1 (MQ=255) cccTGAACGGTGGGGAAAAACCCCATAAGCGCTaa < 1:6127792/35‑1 (MQ=255) cccTGAACGGTGGGGAAAAACCCCATAAGCGCTaa > 1:15232953/1‑35 (MQ=255) ncTGAACGGTGGGGAAAAACCCCATAAGCGCTAAc < 1:6558160/34‑1 (MQ=255) ccTGAACTGTGGGGAAAAACCCCATAAGCGATAAc > 1:8811814/1‑35 (MQ=25) ccTGAACGGTTGGGAAAAACCCCATAAGCGCTAAc > 1:934726/1‑35 (MQ=255) ccTGAACGGTGGGGAAAAACCCCATAAGCTCTAAc > 1:13749086/1‑35 (MQ=255) ccTGAACGGTGGGGAAAAACCCCATAAGCGCTAAc > 1:373127/1‑35 (MQ=255) ccTGAACGGTGGGGAAAAACCCCATAAGCGCTAAc > 1:2857713/1‑35 (MQ=255) ccTGAACGGTGGGGAAAAACCCCATAAGCGCTAAc < 1:39226/35‑1 (MQ=255) ccTGAACGGTGGGGAAAAACCCCATAAGCGCTAAc > 1:17658671/1‑35 (MQ=255) cTGAACGGTGGGGAAAAACCCCATAAGCGCTAACt < 1:8139710/35‑1 (MQ=255) cTGAACGGTGGGGAAAAACCCCATAAGCGCTAACt < 1:237482/35‑1 (MQ=255) cTGAACGGTGGGGAAAAACCCCATAAGCGCTAACt < 1:1364224/35‑1 (MQ=255) cTGAACGGTGGGGAAAAACCCCATAAGCGCTAACt < 1:13183601/35‑1 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACtt > 1:2522966/1‑35 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACtt < 1:1311822/35‑1 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACtt > 1:7254433/1‑35 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACtt > 1:6926761/1‑35 (MQ=255) gAACGGTGGGTAAAAACCCCATAAGCGCTAACTTa > 1:3795501/1‑35 (MQ=255) gAACGGTGGGGGAAAACCCCATAAGCGCTAACTTa < 1:4337295/35‑1 (MQ=255) gAACGGTGGGGAAAAACCCCATAAGCGCTAACTTa > 1:2158681/1‑35 (MQ=255) gAACGGTGGGGAAAAACCCCATAAGCGCTAACTTa > 1:1575261/1‑35 (MQ=255) gAACGGTGGGGAAAAACCCCATAAGCGCTAACTTa < 1:19565655/35‑1 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTaa > 1:15585599/1‑35 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTaa < 1:19432573/35‑1 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTaa < 1:9583602/35‑1 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGAGCTAACTTaa < 1:15926668/35‑1 (MQ=255) aCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAg < 1:2035563/35‑1 (MQ=255) aCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAg < 1:12374056/35‑1 (MQ=255) cGGTGGGGAAAAACCCCATAAGCGCTAACTTAAgg > 1:5106204/1‑35 (MQ=255) cGGTGGGGAAAAACCCCATAAGCGCTAACTTAAgg > 1:968714/1‑35 (MQ=255) cGGTGGGGAAAAACCCCATAAGCGCTAACTTAAgg > 1:11973866/1‑35 (MQ=255) cGGTGGGGAAAAACCCCATAAGCGCTAACTTAAgg < 1:1047088/35‑1 (MQ=255) ggTGGGGAAAAACCCCATAAGCGCTAACTTAAggg < 1:14126372/35‑1 (MQ=255) ggTGGGGAAAAACCCCATAAGCGCTAACTTAAggg > 1:14485136/1‑35 (MQ=255) ggTGGGGAAAAACCCCATAAGCGCTAACTTAAggg < 1:15547320/35‑1 (MQ=255) ggTGGGGAAAAACCCCATAAGCGCTAACTTAAggg > 1:10666634/1‑35 (MQ=255) gTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGt < 1:11429923/35‑1 (MQ=255) tGGGGAAAAACCCCATAAGCGCTAACTTAAGGGtt > 1:19196254/1‑35 (MQ=255) tGGGGAAAAACCCCATAAGCGCTAACTTAAGGGtt < 1:9472935/35‑1 (MQ=255) ggggAAAAACCCCATAAGCGCTAACTTAAGGGTtg < 1:8956749/35‑1 (MQ=255) ggggAAAAACCCCATAAGCGCTAACTTAAGGGTtg > 1:17312594/1‑35 (MQ=255) ggggAAAAACCCCATAAGCGCTAACTTAAGGGTtg < 1:11493048/35‑1 (MQ=255) ggggAAAAACCCCATAAGCGCTAACTTAAGGGTtg > 1:4020473/1‑35 (MQ=255) gggAAAAACCCCATAAGCGCTAACTTAAGGGTtgt > 1:20059/1‑35 (MQ=255) gggAAAAACCCCATAAGCGCTAACTTAAGGGTtgt < 1:12463219/35‑1 (MQ=255) gggAAAAACCCCATAAGCGCTAACTTAAGGGTtgt < 1:20463792/35‑1 (MQ=255) gggAAAAACCCCATAAGCGCTAACTTAAGGGTtgt > 1:11195525/1‑35 (MQ=255) gggAAAAACCCCATAAGCGCTAACTTAAGGGTtgt > 1:3736820/1‑35 (MQ=255) gggAAAAACCCCATAAGCGCTAACTTAAGGGTtgt < 1:13158807/35‑1 (MQ=255) ggAAAAACCCCATAAGCGCTAACTTAAGGGTtgtg > 1:4116664/1‑35 (MQ=40) ggAAAAACCCCATAAGCGCTAACTTAAGGGTtgtg < 1:6929894/35‑1 (MQ=40) ggAAAAACCCCATAAGCGCTAACTTAAGGGTtgtg > 1:2269212/1‑35 (MQ=40) gAAAAACCCCATAAGCGCTAACTTAAGGGTTGTgg < 1:15205727/35‑1 (MQ=38) gAAAAACCCCATAAGCGCTAACTTAAGGGTTGTgg > 1:9178577/1‑35 (MQ=38) gAAAAACCCCATAAGCGCTAACTTAAGGGTTGTgg < 1:18910403/35‑1 (MQ=38) aaaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGt > 1:10170114/1‑35 (MQ=35) aaaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGt > 1:17264292/1‑35 (MQ=35) aaaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGt < 1:5348286/35‑1 (MQ=35) aaaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGt < 1:18277986/35‑1 (MQ=35) aaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTa < 1:7053081/35‑1 (MQ=32) aaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTa > 1:14343118/1‑35 (MQ=32) aaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTa > 1:5896189/1‑35 (MQ=32) aaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTa > 1:2896081/1‑35 (MQ=32) | GGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTA > REL606/2772820‑2772883 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |