New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1286708 = | 97 (0.940) | 10 (0.120) | 4/40 | NT | 12.7% | intergenic (+32/‑151) | narI/ECB_01206 | nitrate reductase 1, gamma (cytochrome b(NR)) subunit/hypothetical protein |
? | REL606 | = 4391784 | 57 (0.670) | coding (602/1164 nt) | yjfC | predicted synthetase/amidase |
ATAAAAAAACCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1286722‑1286708 ‑‑‑‑‑‑‑‑‑‑‑ccgcGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTGCA < REL606/4391784‑4391751 gtgAAAAAACCCCGCGACTCCTGCCCTGCCTGCTG < 1:200466/32‑1 aggAAAAAACCCCGCGACTCCTGCCCTGCCTGCTG < 1:7757426/32‑1 agAAAAAAACCCCGCGACTCCTGCCCTGCCTGCTG < 1:5256519/33‑1 ATAAAAAAACCCCGCGACTCCTGCCCTGCCTGCTG < 1:8681870/35‑1 ATAAAAAAACCCCGCGACTCCTGCCCTGCCTGCTG < 1:17151065/35‑1 agAAAAAACCCCGCGACTCCTGCCCTGCCTGCTGG < 1:11033184/33‑1 TAAAAAAACCCCGCGACTCCTGCCCTGCCTGCTGG < 1:4449016/35‑1 gAAAAAACCCCGCGACTCCTGCCCTGCCTGCTGGG < 1:18821379/34‑1 AAAACACCCCGCGACTCCTGCCCTGCCTGCTGGGC < 1:8241798/35‑1 AAAACCCCGCGACTCCTGCCCTGCCTGCTGGGCGC < 1:15266931/35‑1 aacCCCCGCGACTCCTGCCCTGCCTGCTGGGCGCA < 1:7389424/32‑1 acCCCCGCGACTCCTGCCCTGCCTGCTGGGCGCAG < 1:2160901/33‑1 ACCCCGCGACTCCTGCCCTGCCTGCTGGGCGCAGT < 1:6735293/35‑1 ACCCCGCGACTCCTGCCCTGCCTGCTGGGCGCAGT < 1:5059445/35‑1 CCCCGCGACTCCTGCCCTGCCTGCTGGGCGCAGTC < 1:5877983/35‑1 CCGCGACTCCTGCCCTGCCTGCTGGGCGCAGTCCT < 1:1308334/35‑1 CCGCGACTCCTGCCCTGCCTGCTGGGCGCAGTCCT < 1:11202363/35‑1 CCGCGACTCCTGCCCTGCCTGCTGGGCGCAGTCCT < 1:19157392/35‑1 CCGCGACTCCTGCCCTGCCTGCTGGGCGCAGTCCT < 1:5331845/35‑1 CGCGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTG > 1:7317214/1‑35 CGCGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTG < 1:2245711/35‑1 CGCGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTG < 1:12648509/35‑1 CGCGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTG > 1:1664678/1‑35 CGCGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTG > 1:15139332/1‑35 CGCGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTG > 1:12858408/1‑35 GCGCCTCCTGCCCTGCCTGCTGGGCGCAGTCCTGC < 1:1440148/35‑1 GCGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTGC > 1:11765298/1‑35 GCGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTGC > 1:5584004/1‑35 GCGACTCCTGCCCTGCCGGCTGGGCGCAGTCCTGC > 1:6553372/1‑35 GCGACGCCTGCCCTGCCTGCTGGGCGCAGTCCTGC < 1:19440016/35‑1 CGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTGCA > 1:2422661/1‑35 CGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTGCA > 1:4189807/1‑35 CGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTGCA > 1:2090592/1‑35 CGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTGCA > 1:20364645/1‑35 CGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTGCA < 1:12023188/35‑1 CGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTGCA > 1:14597582/1‑35 ATAAAAAAACCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1286722‑1286708 ‑‑‑‑‑‑‑‑‑‑‑ccgcGACTCCTGCCCTGCCTGCTGGGCGCAGTCCTGCA < REL606/4391784‑4391751 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |