New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3265224 = | 32 (0.310) | 6 (0.070) | 3/38 | NT | 9.0% | coding (1028/1434 nt) | dacB | D‑alanyl‑D‑alanine carboxypeptidase |
? | REL606 | = 3603631 | 96 (1.180) | coding (778/1014 nt) | yhjD | conserved inner membrane protein |
Only 100 of 166 total aligned reads displayed.
CTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTAT > REL606/3603597‑3603665 | cttctGGCGGTTGCCGCGCCACCGTCCGCGCaaaa < 1:5897536/35‑1 (MQ=255) cttctGGCGGTTGCCGCGCCACCGTCCGCGCaaaa < 1:20555687/35‑1 (MQ=255) ttcgGGCGTTTGCCGCGCCACCGTCCGCGCaaaaa < 1:12071865/35‑1 (MQ=37) ttCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAa > 1:8684602‑M2/1‑34 (MQ=255) ttCGGGCGGTTGCCGCGCCACCGTCCGCGCAAAAa > 1:13517834‑M2/1‑34 (MQ=255) tCTGGCGGTTGCCGCGCCACCGTGCGCGCAAAAaa > 1:1373533‑M2/1‑33 (MQ=255) ggCGTTTGCCGCGCCACCGTCCGCGCAAAAaagcc > 1:4416670‑M2/1‑30 (MQ=255) cGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCt < 1:774238/35‑1 (MQ=255) cGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCt > 1:11736260/1‑35 (MQ=255) cGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCt > 1:1701708/1‑35 (MQ=255) ggTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTg < 1:18949337/35‑1 (MQ=255) ggTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTg > 1:10619614/1‑35 (MQ=255) ggTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTg > 1:12332523/1‑35 (MQ=255) ggTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTg > 1:4145026/1‑35 (MQ=255) ggTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTg > 1:15332604/1‑35 (MQ=255) ggTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTg < 1:13921828/35‑1 (MQ=255) gTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGa > 1:3807848/1‑35 (MQ=255) gTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGa < 1:6445318/35‑1 (MQ=255) ttGCTGCGCCACCGTCCGCGCAAAAAAGCCCTGAt > 1:14120177/1‑35 (MQ=255) ttGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGAt > 1:20004297/1‑35 (MQ=255) ttGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGAt < 1:17166746/35‑1 (MQ=255) tGCCGCGCCGCCGTCCGCGCAAAAAAGCCCTGAtt < 1:14657826/35‑1 (MQ=255) tGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGAtt > 1:17119173/1‑35 (MQ=255) gCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTc < 1:12882959/35‑1 (MQ=255) gCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTc < 1:13373769/35‑1 (MQ=255) gCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTc < 1:4061324/35‑1 (MQ=255) ccGCGCCACCGTCCGCGCAAAAAAGCCCTGATTcg > 1:2519913/1‑35 (MQ=255) ccGCGCCACCGTCCGCGCAAAAAAGCCCTGATTcg < 1:19650695/35‑1 (MQ=255) ccGCGCCACCGTCCGCGCAAAAAAGCCCTGATTcg > 1:9483156/1‑35 (MQ=255) ccGCGCCACCGTCCGCGCAAAAAAGCACTGATTcg < 1:13639637/35‑1 (MQ=255) cgcgCCACCGTCCGCGCAAAAAAGCCCTGATTcgc < 1:13907597/35‑1 (MQ=255) cgcgCCACCGTCCGCGCAAAAAAGCCCTGATTcgc > 1:16480607/1‑35 (MQ=255) cgcgCCACCGTCCGCGCAAAAAAGCCCTGATTcgc < 1:13239348/35‑1 (MQ=255) cgcgCCACCGTCCGCGCAAAAAAGCCCTGATTcgc < 1:12693555/35‑1 (MQ=255) cgcgCCACCGTCCGCGCAAAAAAGCCCTGATTcgc > 1:8090068/1‑35 (MQ=255) cgcgCCACCGTCCGCGCAAAAAAGCACTGATTcgc < 1:8260398/35‑1 (MQ=255) gcgcCACCGTCCGCGCAAAAAAGCCCTGATTcgcg < 1:13840706/35‑1 (MQ=255) gcgcCACCGTCCGCGCAAAAAAGCCCTGATTcgcg < 1:12381583/35‑1 (MQ=255) cgcCACCGTCCGCGCAAAAAAGCCCTGATTCGCgg > 1:4448549/1‑35 (MQ=255) cgcCACCGTCCGCGCAAAAAAGCCCTGATTCGCgg < 1:17554624/35‑1 (MQ=255) gcCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGa < 1:7279092/35‑1 (MQ=255) gcCACCGTCCGCGCAAAAAACCCCTGATTCGCGGa > 1:2600539/1‑35 (MQ=255) ccACCGTCCGCGCAAAAAAGCCCTGATTCGCGGaa > 1:12545431/1‑35 (MQ=255) ccACCGTCCGCGCAAAAAAGCCCTGATTCGCGGaa < 1:7581746/35‑1 (MQ=255) cACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAAc > 1:10952141/1‑35 (MQ=255) cACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAAc < 1:18784718/35‑1 (MQ=255) aCCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACa > 1:15342904/1‑35 (MQ=255) aCCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACa > 1:6741013/1‑35 (MQ=255) aCCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACa < 1:17371989/35‑1 (MQ=255) aCCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACa > 1:18124261/1‑35 (MQ=255) ccGTCCGCGCAAAAAAGCCCTGATTCGCGGAACAt < 1:18244977/35‑1 (MQ=255) ccGTCCGCGCAAAAAAGCCCTGATTCGCGGAACAt > 1:14750378/1‑35 (MQ=255) cGTCCGCGCAAAAAAGCCCTGATTCGCGGAACAtt > 1:19131542/1‑35 (MQ=255) cGTCCGCGCAAAAAAGCCCTGATTCGCGGAACAtt < 1:17469369/35‑1 (MQ=255) cGTCCGCGCAAAAAAGCCCTGATTCGCGGAACAtt < 1:461002/35‑1 (MQ=255) gTCCGCGCAAAAAAGCCCTGATTCGCGGAACAttt < 1:18428955/35‑1 (MQ=255) gTCCGCGCAAAAAAGCCCTGATTCGCGGAACAttt < 1:8862892/35‑1 (MQ=255) gTCCGCGCAAAAAAGCCCTGATTCGCGGAACAttt < 1:16246272/35‑1 (MQ=255) cgtgcgcaaaAaagccggtgtcgatattggaaaca > 1:10545634‑M2/4‑11 (MQ=255) ccGCGCTAAAAAGCCCTGATTCGCGGAACATTTCt < 1:5057024/35‑1 (MQ=255) ccGCGCAAAAAAGCCCTGATTCGCGGAACATTTCt < 1:10142883/35‑1 (MQ=255) ccGCGCAAAAAAGCCCTGATTCGCGGAACATTTCt < 1:5573247/35‑1 (MQ=255) ccGCGCAAAAAAGCCCTGATTCGCGGAACATTTCt < 1:5426958/35‑1 (MQ=255) ccGCGCAAAAAAGCCCTGATTCGCGGAACATTTCt < 1:14393216/35‑1 (MQ=255) cgcgCAAAAAAGCCCTGATTCGCGGAACATTTCTg < 1:8924635/35‑1 (MQ=255) cgcgCAAAAAAGCCCTGATTCGCGGAACATTTCTg < 1:13021724/35‑1 (MQ=255) cgcgCAAAAAAGCCCTGATTCGCGGAACATTTCTg < 1:19585876/35‑1 (MQ=255) cgcgCAAAAAAGCCCTGATTCGCGGAACATTTCTg < 1:20396840/35‑1 (MQ=255) cgcgCAAAAAAGCCCTGATTAGCGGAACATTTCTg < 1:17106610/35‑1 (MQ=255) gcgcAAAAAAGCCCTGATTCGCGGAACATTTCTgg < 1:2505451/35‑1 (MQ=255) gcgcAAAAAAGCCCTGATTCGCGGAACATTTCTgg > 1:10172354/1‑35 (MQ=255) gcgcAAAAAAGCCCTGATTCGCGGAACATTTCTgg < 1:4762925/35‑1 (MQ=255) gcgcAAAAAAGCCCTGATTCGCGGAACATTTCTgg < 1:5943846/35‑1 (MQ=255) cgcAAAAaagccggtgtcgatattggaaacaccat > 1:16740330‑M2/1‑7 (MQ=255) cgcAAAAAAGCCCTGATTCGCGGAACATTTCTGgc > 1:11758690/1‑35 (MQ=255) gcAAAAAAGCCCTGATTCGCGGAACATTTCTGgct < 1:7812705/35‑1 (MQ=255) gcAAAAAAGCCCTGATTCGCGGAACATTTCTGgct < 1:11482387/35‑1 (MQ=255) acaAAAaagccggtgtcgatattggaaacaccatt > 1:7882598‑M2/2‑6 (MQ=255) cAAAAAAGCCCTGATTCGCGGGACATTTCTGgctg > 1:6744989/1‑35 (MQ=255) cAAAAAAGCCCTGATTCGCGGAACATTTCTGgctg > 1:731666/1‑35 (MQ=255) acaaaaagccggtgtcgatattggaaacaccatta > 1:13024536‑M2/3‑5 (MQ=255) gagaaagccggtgtcgatattggaaacaccattat > 1:14533975‑M2/4‑4 (MQ=255) aaaaaagccggtgtcgatattggaaacaccattat > 1:7095330‑M2/1‑4 (MQ=255) aaaaaagccggtgtcgatattggaaacaccattat > 1:17684407‑M2/1‑4 (MQ=255) aaaaaaGCCCTGATTCGCGGAACATTTCTGgctgc > 1:12345512/1‑35 (MQ=255) aaaaagccggtgtcgatattggaaacaccattatt > 1:4955848‑M2/1‑3 (MQ=255) aaaaaGCCCTGATTCGCGGAACATTTCTGgctgct < 1:1767400/35‑1 (MQ=255) aaaaaGCCCTGATTCGCGGAACATTTCTGgctgct < 1:15562808/35‑1 (MQ=255) aaaaaGCCCTGATTCGCGGAACATTTCTGgctgct > 1:15047836/1‑35 (MQ=255) aaaaGCCCTGATTCGCGGAACATTTCTGGCTGGTa > 1:13126580/1‑35 (MQ=255) aaaaGCCCTGATTCGCGGAACATTTCTGGCTGCTa > 1:527333/1‑35 (MQ=255) aaaaGCCCTGATTCGCGGAACATTTCTGGCTGCTa > 1:7717479/1‑35 (MQ=255) aaaaGCCCTGATTCGCGGAACATTTCTGGCTGCTa < 1:11051436/35‑1 (MQ=255) aaaaGCCCTGATTCGCGGAACATTTCTGGCTGCTa > 1:10523582/1‑35 (MQ=255) aaagccggtgtcgatattggaaacaccattattgc > 1:5477107‑M2/1‑1 (MQ=255) aaagccggtgtcgatattggaaacacaattattgc > 1:4903020‑M2/1‑1 (MQ=255) aaaGCCCTGATTCGCGGAACATTTCTGGCTGCTAt > 1:20243816/1‑35 (MQ=255) aaaGCCCTGATTCGCGGAACATTTCTGGCTGCTAt < 1:7620368/35‑1 (MQ=255) aaaGCCCTGATTCGCGGAACATTTCTGGCTGCTAt < 1:4660365/35‑1 (MQ=255) aaaGCCCTGATTCGCGGAACATTTCTGGCTGCTAt > 1:8436116/1‑35 (MQ=255) | CTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTAT > REL606/3603597‑3603665 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |