Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 643,362 | IS150 (+) +3 bp | 43.3% | coding (598‑600/954 nt) | ybeF ← | predicted DNA‑binding transcriptional regulator |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 643362 = | 62 (0.720) | 44 (0.450) | 24/46 | NT | 38.2% | coding (600/954 nt) | ybeF | predicted DNA‑binding transcriptional regulator |
? | REL606 | = 666130 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | = 643364 | 61 (0.710) | 50 (0.510) | 29/46 | NT | 41.6% | coding (598/954 nt) | ybeF | predicted DNA‑binding transcriptional regulator |
? | REL606 | 664688 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region |
Only 100 of 220 total aligned reads displayed.
CGTTGTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGTAGTGGATTTCCCTCGCGGCAAATTAACACCA > REL606/643328‑643396 | cGTTGTCGATAGTCCCTCTGTCATCTTCTAAagag > 1:15990909/1‑35 (MQ=255) cGTTGTCGATAGTCCCTCTGTCATCTTCTAAagag > 1:7507823/1‑35 (MQ=255) gTTGTCGATAGTCCCTCTGTCATCTTCTAAagagt < 1:5306852/35‑2 (MQ=255) gTTGTCGATAGTCCCTCTGTCATCTTCTAAagaga < 1:13206476/35‑1 (MQ=255) gTTGTCGATAGTCCCTCTGTCATCTTCTAAagaga > 1:11777513/1‑35 (MQ=255) tGTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGt < 1:3285331‑M1/35‑2 (MQ=255) tGTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGt < 1:16934588‑M1/35‑2 (MQ=255) tGTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGt > 1:15831294‑M1/1‑34 (MQ=255) gTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGtg > 1:1350523‑M1/1‑33 (MQ=255) gTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGtg > 1:4315194‑M1/1‑33 (MQ=255) cGATAGTCCCTCTGTCATCTTCTAAAGAGagtagt > 1:11591275/1‑35 (MQ=255) cGATAGTCCCTCTGTCATCTTCTAAAGAGagtagt < 1:7231588/35‑1 (MQ=255) cGATAGTCCCTCTGTCATCTTCTAAAGAGAGtgta < 1:2115902‑M1/35‑5 (MQ=255) cGATAGTCCCTCTGTCATCTTCTAAAGAGAGtgta > 1:19495556‑M1/1‑31 (MQ=255) gATAGTCCCTCTGTCATCTTCTAAAGAGAGtgtac > 1:10472613‑M1/1‑30 (MQ=255) gATAGTCCCTCTGTCATCTTCTAAAGAGAGTAGTg < 1:12029970/35‑1 (MQ=255) aTAGTCCCTCTGTCATCTTCTAAAGAGAGtgtact < 1:17798511‑M1/35‑7 (MQ=255) aTAGTCCCTCTGTCATCTTCTAAAGAGAGtgtact > 1:17952832‑M1/1‑29 (MQ=255) aTAGTCCCTCTGTCATCTTCTAAAGAGAGtgtact > 1:205714‑M1/1‑29 (MQ=255) aTAGTCCCTCTGTCATCTTCTAAAGAGAGtgtact > 1:8862281‑M1/1‑29 (MQ=255) tAGTCCCTCTGTCATCTTCTAAAGAGAGtgtactg < 1:18186133‑M1/35‑8 (MQ=255) tAGTCCCTCTGTCATCTTCTAAAGAGAGTAGTGGa > 1:6443088/1‑35 (MQ=255) tAGTCCCTCTGTCATCTTCTAAAGAGAGTAGTGGa > 1:297577/1‑35 (MQ=255) aGTCCCTCTGTCATCTTCTAAAGAGAGtgtactgc > 1:12117068‑M1/1‑27 (MQ=255) aGTCCCTCTGTCATCTTCTAAAGAGAGtgtactgc < 1:16593739‑M1/35‑9 (MQ=255) aGTCCCTCTGTCATCTTCTAAAGAGAGTAGTGGAt > 1:2228450/1‑35 (MQ=255) tccaactttttggggtcagtacaGAGTAGTGGAtt < 1:15452338‑M1/12‑1 (MQ=255) gTCCCTCTGTCATCTTCTAAAGAGAGtgtactgca > 1:4546397‑M1/1‑26 (MQ=255) tCCCTCTGTCATCTTCTAAAGAGAGtgtactgcac > 1:18659308‑M1/1‑25 (MQ=255) tCCCTCTGTCATCTTCTAAAGAGAGtgtactgcac < 1:16044636‑M1/35‑11 (MQ=255) tCCCTCTGTCATCTTCTAAAGAGAGTAGTGGAttt < 1:1358543/35‑1 (MQ=255) tCCCTCTGTCATCTTCTAAAGAGAGTAGTGGAttt > 1:19860077/1‑35 (MQ=255) tCCCTCTGTCATCTTCTAAAGAGAGTAGTGGAttt < 1:352722/35‑1 (MQ=255) ccaactttttggggtcagtacaGAGTAGTGGAttt > 1:26730‑M1/23‑35 (MQ=255) caactttttggggtcagtacaGAGTAGTGGATTTc < 1:1006387‑M1/14‑1 (MQ=255) ccTCTGTCATCTTCTAAAGAGAGtgtactgcaccc > 1:3818813‑M1/1‑23 (MQ=255) ccTCTGTCATCTTCTAAAGAGAGTAGTGGATTTcc < 1:111495/35‑1 (MQ=255) aactttttggggtcagtacaGAGTAGTGGATTTcc > 1:7205599‑M1/21‑35 (MQ=255) ctctGTCATCTTCTAAAGAGAGTAGTGGATTTccc < 1:17345660/35‑1 (MQ=255) ctctGTCATCTTCTAAAGAGAGTAGTGGATTTccc > 1:17480091/1‑35 (MQ=255) ctctGTCATCTTCTAAAGAGAGTAGTGGATTTacc < 1:11950747/35‑1 (MQ=255) actttttggggtcagtacaGAGTAGTGGATTTccc < 1:12659091‑M1/16‑1 (MQ=255) tctGTCATCTTCTAAAGAGAGtgtactgcacccat < 1:6062652‑M1/35‑15 (MQ=255) tctGTCATCTTCTAAAGAGAGTAGTTGATTTCCCt > 1:10139669/1‑35 (MQ=255) tctGTCATCTTCTAAAGAGAGTAGTGGATTTCCCt > 1:17081136/1‑35 (MQ=255) ctttttggggtcagtacaGAGTAGTGGATTTCCCt < 1:4857888‑M1/17‑1 (MQ=255) ctttttggggtcagtacaGAGTAGTGGATTTCCCt < 1:16872030‑M1/17‑1 (MQ=255) tttttggggtcagtacaGAGTAGTGGATTTCCCTc > 1:11712572‑M1/18‑35 (MQ=255) tttttggggtcagtacaGAGTAGTGGATTTCCCTc < 1:13882523‑M1/18‑1 (MQ=255) tttttggggtcagtacaGAGTAGTGGATTTCCCTc > 1:2779134‑M1/18‑35 (MQ=255) ctGTCATCTTCTAAAGAGAGtgtactgcacccatt > 1:8426651‑M1/1‑20 (MQ=255) ctGTCATCTTCTAAAGAGAGtgtactgcacccatt < 1:8945346‑M1/35‑16 (MQ=255) ctGTCATCTTCTAAAGAGAGTAGTGGATTTCCCTc < 1:15060234/35‑1 (MQ=255) ctGTCATCTTCTAAAGAGAGTAGTGGATTTCCCTc > 1:12783461/1‑35 (MQ=255) ctGTCATCTTCTAAAGAGAGTAGTGGATTTCCCTc > 1:4939588/1‑35 (MQ=255) tatcaTCTTCTAAAGAGAGtgtactgcacccattt > 1:14618321‑M1/3‑19 (MQ=255) tGTCATCTTCTAAAGAGAGtgtactgcacccattt > 1:12318039‑M1/1‑19 (MQ=255) tGTCATCTTCTAAAGAGAGTAGTGGATTTCCCTcg < 1:3941080/35‑1 (MQ=255) tttggggtcagtacaGAGTAGTGGATTTCCCTcgc < 1:2564026‑M1/20‑1 (MQ=255) tttggggtcagtacaGAGTAGTGGATTTCCCTcgc > 1:13398308‑M1/16‑35 (MQ=255) tttggggtcagtacaGAGTAGTGGATTTCCCTcgc > 1:10831412‑M1/16‑35 (MQ=255) gTCATCTTCTAAAGAGAGtgtactgcacccatttt < 1:4780553‑M1/35‑18 (MQ=255) gTCATCTTCTAAAGAGAGTAGTGTATTTCCCTcgc > 1:17593165/1‑35 (MQ=255) tCATCTTCTAAAGAGAGtgtactgcacccattttg > 1:12949379‑M1/1‑17 (MQ=255) tCATCTTCTAAAGAGAGtgtactgcacccattttg > 1:16360168‑M1/1‑17 (MQ=255) tCATCTTCTAAAGAGAGTAGTGGATTTCCCTcgcg > 1:3510341/1‑35 (MQ=255) tCATCTTCTAAAGAGAGTAGTGGATTTCCCTcgcg < 1:4852651/35‑1 (MQ=255) tggggtcagtacaGAGTAGTGGATTTCCCTCGCgg < 1:10455754‑M1/22‑1 (MQ=255) tggggtcagtacaGAGTAGTGGATTTCCCTCGCgg < 1:19132983‑M1/22‑1 (MQ=255) cATCTTCTAAAGAGAGtgtactgcacccattttgt < 1:5140496‑M1/35‑20 (MQ=255) cATCTTCTAAAGAGAGtgtactgcacccattttgt < 1:15644369‑M1/35‑20 (MQ=255) ggggtcagtacaGAGTAGTGGATTTCCCTCGCGGc > 1:16137706‑M1/13‑35 (MQ=255) ggtcagtacaGAGTAGTGGATTTCCCTCGCGGCaa < 1:19706888‑M1/25‑1 (MQ=255) cttctAAAGAGAGtgtactgcacccattttgttgg > 1:6668402‑M1/1‑13 (MQ=255) cttctAAAGAGAGTAGTGGATTTCCCTCGCGGCaa > 1:20236527/1‑35 (MQ=255) cttctAAAGAGAGTAGTGGATTTCCCTCGCGGCaa < 1:14496068/35‑1 (MQ=255) ttctAAAGAGAGtgtactgcacccattttgttgga < 1:20335958‑M1/35‑24 (MQ=255) ttctAAAGAGAGTAGTGGATTTCCCTCGCGGCaaa < 1:6951708/35‑1 (MQ=255) ttctAAAGAGAGTAGTGGATTTCCCTCGCGGCaaa > 1:20165811/1‑35 (MQ=255) ttctAAAGAGAGTAGTGGATTTCCCTCGCGGCaaa < 1:5185035/35‑1 (MQ=255) tctAAAGAGAGtgtactgcacccattttgttggac < 1:7770246‑M1/35‑25 (MQ=255) tctAAAGAGAGtgtactgcacccattttgttggac < 1:66266‑M1/35‑25 (MQ=255) tctAAAGAGAGTAGTGGATTTCCCTCGCGGCAAAt > 1:14662567/1‑35 (MQ=255) tctAAAGAGAGTAGTGGATTTCCCTCGCGGCAAAt < 1:8511478/35‑1 (MQ=255) tctAAAGAGAGTAGTGGATTTCCCTCGCGGCAAAt > 1:9378779/1‑35 (MQ=255) ctAAAGAGAGTAGTGGATTTCCCTCGCGGCAAAtt < 1:5536988/35‑1 (MQ=255) cagtacaGAGTAGTTGATTTCCCTCGCGGCAAAtt < 1:1038461‑M1/28‑1 (MQ=255) cagtacaGAGTAGTGGATTTCCCTCGCGGCAAAtt < 1:16227043‑M1/28‑1 (MQ=255) aaaGAGAGtgtactgcacccattttgttggacgat < 1:18298874‑M1/35‑28 (MQ=255) aaaGAGAGTAGTGGATTTCCCTCGCTGCAAATTaa > 1:19687236/1‑35 (MQ=255) tacaGAGTAGTGGATTTCCCTCGCGGCAAATTAac > 1:15258080‑M1/5‑35 (MQ=255) aaGAGAGTAGTGGATTTCCCTCGCGCCAAATTaaa > 1:19060858/1‑34 (MQ=255) agagagTAGTGGATTTCCCTCGCGGCAAATTAaca < 1:4115302/35‑1 (MQ=255) acaGAGTAGTGGATTTCCCTCGCGGCCAATTAaca < 1:19757912‑M1/32‑1 (MQ=255) acaGAGTAGTGGATTTCCCTCGCGGCAAATTAaca > 1:17851754‑M1/4‑35 (MQ=255) aGAGTAGTGGATTTCCCTCGCGGCAAATTAACAcc < 1:17138412‑M1/34‑1 (MQ=255) aGAGTAGTGGATTTCCCTCGCGGCAAATTAACAcc > 1:1953474‑M1/2‑35 (MQ=255) gagTAGTGGATTTCCCTCTCGGCAAATTAACACCa > 1:4097562/1‑35 (MQ=255) gagTAGTGGATTTCCCTCGCGGCAAATTAACACCa > 1:5944404/1‑35 (MQ=255) gagTAGTGGATTTCCCTCGCGGCAAATTAACACCa < 1:3623576/35‑1 (MQ=255) | CGTTGTCGATAGTCCCTCTGTCATCTTCTAAAGAGAGTAGTGGATTTCCCTCGCGGCAAATTAACACCA > REL606/643328‑643396 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |