Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 1,462,320 | IS150 (–) +3 bp | 90.4% | intergenic (‑82/‑257) | mokB ← / → trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 664688 = | NA (NA) | 66 (0.700) | 36/44 | NT | 89.1% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 1462320 = | 7 (0.090) | intergenic (‑82/‑259) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor | |||||
* | ? | REL606 | = 666130 | NA (NA) | 66 (0.640) | 36/48 | NT | 89.2% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 1462322 | 7 (0.080) | intergenic (‑84/‑257) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
Only 100 of 201 total aligned reads displayed.
ATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGAC > REL606/1462288‑1462356 | atttcatcgtccaacaaaatgggtgcagtacaGGc > 1:16241921‑M2/33‑35 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaGGc > 1:526751‑M2/33‑35 (MQ=255) aTTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGc < 1:9009818/35‑1 (MQ=255) tttcatagtccaacaaaatgggtgcagtacaGGCa < 1:13543637‑M2/4‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaGGCAc > 1:1787087‑M2/31‑35 (MQ=255) tCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtg < 1:14278990‑M2/35‑3 (MQ=255) tCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtg < 1:9499400‑M2/35‑3 (MQ=255) cccGTTTAGCCTGAAAACAGAAAGTCTCAGGCAcc < 1:10241519/35‑1 (MQ=255) cccGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgt < 1:3527717‑M2/35‑4 (MQ=255) cccGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgt < 1:2334417‑M2/35‑4 (MQ=255) cccGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgt > 1:16783535‑M2/1‑32 (MQ=255) ccGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgta > 1:13659137‑M2/1‑31 (MQ=255) catcgtccaacaaaatgggtgcagttcaGGCAccc < 1:6664886‑M2/7‑1 (MQ=255) catcgtccaacaaaatgggtgcagtacaGGCAccc < 1:2525105‑M2/7‑1 (MQ=255) atcgtccaacaaaatgggtgcagtacaGGCACCCg > 1:19097388‑M2/28‑35 (MQ=255) tcgtccaacaaaatgggtgcagtacaGGCACCCGc < 1:19731984‑M2/9‑1 (MQ=255) ggTTAGCCTGAAAACAGAAAGTCTCAGGCtggact < 1:18869807‑M2/35‑7 (MQ=255) gTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactg < 1:9128899‑M2/35‑8 (MQ=255) gTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCa < 1:16657951/35‑1 (MQ=255) cgtccaacaaaatgggtgcagtacaGGCACCCGCa < 1:5047936‑M2/10‑1 (MQ=255) ttAGCCTGAAACCAGAAAGTCTCAGGCtgtactga > 1:17514435‑M2/1‑27 (MQ=255) ttAGCCTGAAAACAGAAAGTCTCAGGCtgtactga > 1:5798230‑M2/1‑27 (MQ=255) ttAGCCTGAAAACAGAAAGTCTCAGGCtgtactga < 1:3111534‑M2/35‑9 (MQ=255) ttAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAg < 1:14570304/35‑1 (MQ=255) gtccaacaaaatgggtgcagtacaGGCACCCGCAg > 1:13022892‑M2/25‑35 (MQ=255) gtccaacaaaatgggtgcagtacaGGCACCCGCAg > 1:176300‑M2/25‑35 (MQ=255) tAGCCTGAAAACAGAAAGTCTCAGGCtgtactgac > 1:4809770‑M2/1‑26 (MQ=255) tAGCCTAAAAACAGAAAGTCTCAGGCtgtactgac > 1:512217‑M2/1‑26 (MQ=255) ccaacaaaatgggtgcagtacaGGCACCCGCAGGc > 1:11395936‑M2/23‑35 (MQ=255) gCCTGAAAACAGAAAGTCTCAGGCtgtactgaccc < 1:12248921‑M2/35‑12 (MQ=255) gCCTGAAAACAGAAAGTCTCAGGCtgtactgaccc > 1:15212178‑M2/1‑24 (MQ=255) caacaaaatgggtgcagtacaGGCACCCGCAGGCa > 1:16083710‑M2/22‑35 (MQ=255) caacaaaatgggtgcagtacaGGCACCCGCAGGCa < 1:1502576‑M2/14‑1 (MQ=255) caacaaaatgggtgcagtacaGGCACCCGCAGGCa > 1:7058757‑M2/22‑35 (MQ=255) ccTGAAAACAGAAAGTCTCAGGCtgtactgacccc < 1:7989826‑M2/35‑13 (MQ=255) aacaaaatgggtgcagtacaGGCACCCGCAGGCAt < 1:3311998‑M2/15‑1 (MQ=255) cTGAAAACAGAAAGTCTCAGGCtggactgacccca < 1:10586241‑M2/35‑14 (MQ=255) cTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATc > 1:1989502/1‑35 (MQ=255) acaaaatgggtgcagtacaGGCACCCGCAGGCATc < 1:3568065‑M2/16‑1 (MQ=255) acaaaatgggtgcagtacaGGCACCCGCAGGCATc > 1:17567007‑M2/20‑35 (MQ=255) acaaaatgggtgcagtacaGGCACCAGCAGGCATc < 1:20131869‑M2/16‑1 (MQ=255) caaaatgggtgcagtacaGGCACCCGCAGGCATcc < 1:6104209‑M2/17‑1 (MQ=255) gAAAACAGAAAGTCTCAGGCtgtactgaccccaaa < 1:10923099‑M2/35‑16 (MQ=255) gAAAACAGAAAGTCTCAGGCtgtactgaccccaaa < 1:4007113‑M2/35‑16 (MQ=255) aaaatgggtgcagtacaGGCACCCGCAGGCATCCt < 1:4229211‑M2/18‑1 (MQ=255) aaaatgggtgcagtacaGGCACCCGCAGGCATCCt < 1:7394245‑M2/18‑1 (MQ=255) aaaatgggtgcagtacaGGCACCCGCAGGCATCCt > 1:11882041‑M2/18‑35 (MQ=255) aaaatgggtgcagtacaGGCACCCGCAGGCATCCt > 1:9805231‑M2/18‑35 (MQ=255) aaaaCAGAAAGTCTCAGGCtgtactgaccccaaaa > 1:582742‑M2/1‑19 (MQ=255) aaaCAGAAAGTCTCAGGCtgtactgaccccaaaaa > 1:15740983‑M2/1‑18 (MQ=255) aaaCAGAAAGTCTCAGGCtgtactgaccccaaaaa > 1:7659166‑M2/1‑18 (MQ=255) atgggtgcagtacaGGCACCCGCATGCATCCTATg > 1:16172177‑M2/15‑35 (MQ=255) atgggtgcagtacaGGCACCCGCAGGCATCCTATg > 1:14679160‑M2/15‑35 (MQ=255) aaCAGAAAGTCTCAGGCtgtactgacccaaaaaag > 1:1900911‑M2/1‑17 (MQ=255) tgggtgcagtacaGGCACCCGCAGGCATCCTATGa > 1:12744485‑M2/14‑35 (MQ=255) tgggtgcagtacaGGCACCCGCAGGCATCCTATGa < 1:11041915‑M2/22‑1 (MQ=255) gggtgcagtacaGGCCCCCGCAGGCATCCTATGAg < 1:815503‑M2/23‑1 (MQ=255) gggtgcagtacaGGCACCCGCAGGCATCCTATGAg > 1:4712252‑M2/13‑35 (MQ=255) cAGAAAGTCTCAGGCtgtactgaccccaaaaagtt > 1:7470145‑M2/1‑15 (MQ=255) ggtgcagtacaGGCACCCGCAGGCATCCTATGAgg > 1:8602682‑M2/12‑35 (MQ=255) ggtgcagtacaGGCACCCGCAGGCATCCTATGAgg < 1:10038697‑M2/24‑1 (MQ=255) aGAAAGTCTCAGGCtgtactgaccccaaaaagttg > 1:2620828‑M2/1‑14 (MQ=255) gtgcagtacaGGCACCCGCAGGCATCCTATGAGGt > 1:12458113‑M2/11‑35 (MQ=255) tgcagtacaGGCACCCGCAGGCATCCTATGAGGtt > 1:9208401‑M2/10‑35 (MQ=255) tgcagtacaGGCACCCGCAGGCATCCTATGAGGtt < 1:18085834‑M2/26‑1 (MQ=255) aaaGTCTCAGGCtgtactgaccccaaaaagttgga > 1:1089536‑M2/1‑12 (MQ=255) gcagtacaGGCACCCGCAGGCATCCTATGAGGttt < 1:2728830‑M2/27‑1 (MQ=255) gcagtacaGGCACCCGCAGGCATCCTATGAGGttt < 1:3010175‑M2/27‑1 (MQ=255) aaGTCTCAGGCtgtactgaccccaaaaagttggac > 1:4429264‑M2/1‑11 (MQ=255) cagtacaGGCACCCGCAGGCATCCTATGAGGTTTc < 1:15847504‑M2/28‑1 (MQ=255) aGTCTCAGGCtgtactgaccccaaaaagttggaca < 1:19517273‑M2/35‑26 (MQ=255) agtacaGGCACCCGCAGGCATCCTATGAGGTTTcc > 1:12093406‑M2/7‑35 (MQ=255) agtacaGGCACCCGCAGGCATCCTATGAGGTTTcc > 1:19685279‑M2/7‑35 (MQ=255) tctcAGGCACCCGCAGGCATCCTATGAGGTTTCCt < 1:10390511/35‑1 (MQ=255) gtacaggCtgtactgaccccaaaaagttggacagt > 1:18323231‑M2/4‑8 (MQ=255) gtacaGGCCCCCGCAGGCATCCTATGAGGTTTCCt < 1:8354529‑M2/30‑1 (MQ=255) gtacaGGCACCCGCAGGCATCCTATGAGGTTTCCt < 1:11663071‑M2/30‑1 (MQ=255) gtacaGGCACCCGCAGGCATCCTATGAGGTTTCCt < 1:13678876‑M2/30‑1 (MQ=255) tacaGGCACCCGCAGGCATCCTATGAGGTTTCCtt < 1:10430288‑M2/31‑1 (MQ=255) tacaGGCACCCGCAGGCATCCTATGAGGTTTCCtt < 1:5612291‑M2/31‑1 (MQ=255) tacaGGCACCCGCAGGCATCCTATGAGGTTTCCtt > 1:1935356‑M2/5‑35 (MQ=255) tacaGGCACCCGCAGGCATCCTATGAGGTTTCCtt < 1:15255429‑M2/31‑1 (MQ=255) tacaGGCACCCGCAGGCATCCTATGAGGTTTCCtt < 1:6308772‑M2/31‑1 (MQ=255) tacaGGCACACGCAGGCATCCTATGAGGTTTCCtt < 1:18596494‑M2/31‑1 (MQ=255) ctcAGGCtgtactgaccccaaaaagttggacagtt > 1:2796319‑M2/1‑7 (MQ=255) tcAGGCtgtactgaccccaaaaagttggacagtta > 1:8012463‑M2/1‑6 (MQ=255) acaGGCACCCGCAGGCATCCTATGAGGTTTGCTTa > 1:2466412‑M2/4‑35 (MQ=255) acaGGCACCCGCAGGCATCCTATGAGGTTTCCTTa > 1:6978422‑M2/4‑35 (MQ=255) acaGGCACCCGCAGGCATCCTATGAGGTTTCCTTa < 1:11935460‑M2/32‑1 (MQ=255) acaGGCACCCGCAGGCATCCTATGAGGTTTCATTa < 1:15796537‑M2/32‑1 (MQ=255) acaGGCACCCGCAGGCATCCTATGAGGTTTCATTa < 1:4731506‑M2/32‑1 (MQ=255) caGGCACCCGCAGGCATCCTATGAGGTTTCCTTAg > 1:11312806‑M2/3‑35 (MQ=255) caGGCACCCGCAGGCATCCTATGAGGTTTCCTTAg < 1:17001939‑M2/33‑1 (MQ=255) cAGGCtgtactgaccccaaaaagttggacagttaa > 1:17364076‑M2/1‑5 (MQ=255) aGGCACCCGCAGGCATCCTATGAGGTTTCCTTAgg < 1:14467506‑M2/34‑1 (MQ=255) ggCACCCGCAGGCATCCTATGAGGTTTCCTTAggg < 1:1296318/35‑1 (MQ=255) gCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGa > 1:8214271/1‑35 (MQ=255) gCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGa < 1:5010907/35‑1 (MQ=255) cACCCGCAGGCATCCTATGAGGTTTCCTTAGGGAc < 1:6827705/35‑1 (MQ=255) cACCCGCAGGCATCCTATGAGGTTTCCTTAGGGAc > 1:20472883/1‑35 (MQ=255) | ATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGAC > REL606/1462288‑1462356 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |