New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1349559 = | 56 (0.540) | 6 (0.060) | 3/46 | NT | 8.3% | intergenic (‑151/+217) | fabI/ycjD | enoyl‑(acyl carrier protein) reductase/hypothetical protein |
? | REL606 | = 2307173 | 79 (0.800) | coding (767/1218 nt) | yfaW | predicted enolase |
Only 100 of 133 total aligned reads displayed.
TAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTC > REL606/1349525‑1349592 | ttcagttcgcgataactttcatactgctgtggcgg > 1:7971881‑M1/35‑35 (MQ=255) ttcagttcgcgataactttcatactgctgtggcgg > 1:7694183‑M1/35‑35 (MQ=255) ttcagttcgcgataactttcatactgctgtggcgg > 1:19827536‑M1/35‑35 (MQ=255) ttcagttcgcgataactttcatactgctgtggcgg > 1:19508312‑M1/35‑35 (MQ=255) tcccagcaccagttttccataaactgactCGGCAg < 1:20057103‑M1/6‑1 (MQ=255) tcccagcaccagttttccataaactgactCGGCAg < 1:11582145‑M1/6‑1 (MQ=255) taGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAg < 1:11834659/35‑1 (MQ=255) taGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAg > 1:15716331/1‑35 (MQ=255) taGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAg > 1:13632453/1‑35 (MQ=255) aGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAgg < 1:19324640/35‑1 (MQ=255) aGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAgg > 1:17328625/1‑35 (MQ=255) aGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAgg < 1:17043146/35‑1 (MQ=255) gTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAggg > 1:11211509/1‑35 (MQ=255) gTTGCCAGGTCCGACCGGAGAAGGCTGCGGCAggg < 1:18842897/35‑1 (MQ=255) ccagcaccagttttccataaactgactCGGCAggg < 1:10632633‑M1/8‑1 (MQ=255) cagttcgcgataactttcatactgctgtggcgggg < 1:13914300‑M1/3‑1 (MQ=255) cagttcgcgataactttcatactgctgtggcgggg < 1:17416080‑M1/3‑1 (MQ=255) ttGCCAGGTCCGACCGGAGCAGGCTGCGGCAgggg < 1:6725099/35‑1 (MQ=255) ttGCCAGGTCCGACCGGAGCAGGCTGCGGCAgggg > 1:13093582/1‑35 (MQ=255) cagcaccagttttccataaactgactCGGCAgggg < 1:4121101‑M1/9‑1 (MQ=255) agttcgcgataactttcatactgctgtggcggggg < 1:13597784‑M1/4‑1 (MQ=255) agttcgcgataactttcatactgctgtggcggggg < 1:15426573‑M1/4‑1 (MQ=255) tGCCAGGTCCGACCGGAGCAGGCTGCGGCAggggg > 1:16737825/1‑35 (MQ=255) tGCCAGGTCCGACCGGAGCAGGCTGCGGCAggggg < 1:6363807/35‑1 (MQ=255) tGCCAGGTCCGACCGGAGCAGGCTGCGGCAcgggg > 1:4811569/1‑35 (MQ=255) agcaccagttttccataaactgactCGGCAggggg < 1:8467093‑M1/10‑1 (MQ=255) agcaccagttttccataaactgactCGGCAggggg < 1:19629439‑M1/10‑1 (MQ=255) ttcgcgataactttcatactgctgtggcggggggg < 1:14931248‑M1/6‑1 (MQ=255) ttcgcgataactttcatactgctgtggcgggaggg < 1:7637761‑M1/6‑1 (MQ=255) gcaccagttttccataaactgactCGGCAgggggg < 1:754006‑M1/11‑1 (MQ=255) gCCAGGTCCGACCGGAGCAGGCTGCGGCAgggggg < 1:13281633/35‑1 (MQ=255) tcgcgataactttcatactgctgtggcggggggga < 1:4298799‑M1/7‑2 (MQ=255) ccAGGTCCGACCGGAGCAGGCTGCGGCAggggggg > 1:8298771/1‑35 (MQ=255) ccAGGTCCGACCGGAGCAGGCTGCGGCAggggggg > 1:757472/1‑35 (MQ=255) ccAGGTCCGACCGGAGCAGGCTGCGGCAggggggg < 1:16468888/35‑1 (MQ=255) ccAGGTCCGACCGGAGCAGGCTGCGGCAggggggg < 1:15582865/35‑1 (MQ=255) caccagttttccataaactgactCGgcaggggtgg < 1:14999080‑M1/12‑4 (MQ=255) caccagttttccataaactgactCGGCAggggggg < 1:3555004‑M1/12‑1 (MQ=255) caccagttttccataaactgactCGGCAggggggg < 1:11749451‑M1/12‑1 (MQ=255) cgcgataactttcatactgctgtggcgGGGGGGgc < 1:11827569‑M1/8‑1 (MQ=255) cAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgc < 1:9004347/35‑1 (MQ=255) accagttttccataaactgactCGGCagggggggg < 1:15511621‑M1/13‑2 (MQ=255) accagttttccataaactgactCGGCAGGGGGGgc < 1:17329054‑M1/13‑1 (MQ=255) ccagttttccataaactgactCGgcaggggggcgg < 1:13828613‑M1/14‑4 (MQ=255) ccagttttccataaactgactCGGCAGGGGGGgcg < 1:8172754‑M1/14‑1 (MQ=255) aGGTCCGACCGGAGCAGGCTGCGGCCggggggggg > 1:3236639/1‑33 (MQ=37) aGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcg > 1:13964604/1‑35 (MQ=255) aGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcg < 1:16851534/35‑1 (MQ=255) aGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcg > 1:5485782/1‑35 (MQ=255) aGGTCCGACCCGAGCAGGCTGCGGCAGGGGGGgcg > 1:14697133/1‑35 (MQ=255) ggTCCGACCGGAGCAGGCTGCTGCAGGGGGGgcgc > 1:7161058/1‑35 (MQ=255) ggTCCGACCGGAGCAGGCTGCGGCAGGGGGGgggc > 1:14932605/1‑35 (MQ=255) cgataactttcatactgctgtggcgGGGGgggctc < 1:19680195‑M1/10‑3 (MQ=255) cagttttccataaactgactCGGCAGGGGGggcgg < 1:11568642‑M1/15‑2 (MQ=255) cagttttccataaactgactCGGCAGGGGGGgcgc < 1:7817516‑M1/15‑1 (MQ=255) gataactttcatactgctgtggcgGGGggggccct < 1:8476097‑M1/11‑4 (MQ=255) gataactttcatactgctgtggcgGGGGGGGCGCt < 1:3508480‑M1/11‑1 (MQ=255) gTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCt < 1:8089477/35‑1 (MQ=255) gTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCt < 1:9285842/35‑1 (MQ=255) tCCGACCGGAGCAGGCTGCGGCAGGGGGGgggcct > 1:11549064/1‑33 (MQ=37) tCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCtt < 1:14264973/35‑1 (MQ=255) ttttccataaactgactCGGCAGGGggggcgcgtc < 1:1623841‑M1/18‑4 (MQ=255) ttttccataaactgactCGGCAGGGGGGGCgctcc < 1:13773806‑M1/18‑3 (MQ=255) taactttcatactgctgtggcgGGGGGGGCGCttt < 1:8404970‑M1/13‑1 (MQ=255) ccGACCGGAGCAGGCTGCGGCAGGGGGGGGGCttt > 1:16279467/1‑35 (MQ=255) cGACCGGAGCAGGCTGCGGCAGGGGGGGGGCtttt > 1:8598377/1‑35 (MQ=255) cGACCGGAGCAGGCTGCGGCAGGGGGGGGGCcttt > 1:4693626/1‑35 (MQ=37) gACCGGAGCAGGCTGCGGCAGGGGGGGGGCttttt > 1:13302920/1‑34 (MQ=255) gACCGGAGCAGGCTGCGGCAGGGGGGGGGCgtttt > 1:6356249/1‑34 (MQ=37) gACCGGAGCAGGCTGCGGCAGGGGGGGGGCgtttt > 1:9821861/1‑34 (MQ=37) aCCGGAGCAGGCTGCGGCAGGGGGGGGGCcttttt > 1:12804149/1‑33 (MQ=25) aCCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTcc < 1:37706/35‑1 (MQ=255) aCCGGAGCAGGCTGAGGCAGGGGGGGCGCTTTTcc < 1:3621076/35‑1 (MQ=255) ccGGAGCAGGCTGCGGCAGGGGGGGGGCctttttt > 1:1699499/1‑32 (MQ=25) gAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTc < 1:4466059/35‑1 (MQ=255) gAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTc < 1:19368781/35‑1 (MQ=255) gAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTc < 1:442721/35‑1 (MQ=255) aggaGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCa < 1:17838833/32‑1 (MQ=255) aGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCa < 1:4510337/35‑1 (MQ=255) aGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCa < 1:13279778/35‑1 (MQ=255) gCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCAc < 1:2827788/35‑1 (MQ=255) aGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCAccc < 1:4926932/35‑1 (MQ=255) ggCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCt < 1:14436043/35‑1 (MQ=255) ggCTGCGGCAGGGGGGGCGCTTTTCACCTCACCCt < 1:9569212/35‑1 (MQ=255) gCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTa < 1:3315506/35‑1 (MQ=255) gCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTa < 1:2363207/35‑1 (MQ=255) cTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTaa < 1:15810175/35‑1 (MQ=255) gCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAAcc < 1:15801754/35‑1 (MQ=255) gCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAAcc < 1:8836544/35‑1 (MQ=255) CGGCAGGGGGGGCGCTTTTCCCCTCACCCTAAccc > 1:6186598‑M1/1‑35 (MQ=255) CGGCAGGGGGGGCGCTTTTCCCATCACCCTAAccc > 1:4555014‑M1/1‑35 (MQ=255) GGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCct > 1:12689574‑M1/1‑35 (MQ=255) GGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCct > 1:10753721‑M1/1‑35 (MQ=255) GCAGGGGGGGCGCTTTTCCCCTCACCCTAACCctc > 1:16598585‑M1/1‑35 (MQ=255) GCAGGGGGGGCGCTTTTCCCCTCACCCTAACCctc > 1:17577495‑M1/1‑35 (MQ=255) GCAGGGGGGGCGCTTTTCCCCTCACCCTAACCctc > 1:5155066‑M1/1‑35 (MQ=255) CAGGGGGGGCGCTTTTCCCCTCACCCTAACCctct > 1:7322736‑M1/1‑35 (MQ=255) AGGGGGGGCGCTTTTCCCCTCACCCTAACCCtctc > 1:17310176‑M1/1‑35 (MQ=255) AGGGGGGGCGCTTTTCCCCTCACCCTAACCCtctc > 1:16149026‑M1/1‑35 (MQ=255) AGGGGGGGCGCTTTTCCCCTCACCCTAACCCtctc > 1:10857580‑M1/1‑35 (MQ=255) | TAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTC > REL606/1349525‑1349592 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |