New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 462517 = | 55 (0.540) | 11 (0.120) | 4/42 | NT | 17.3% | coding (363/528 nt) | priC | primosomal replication protein N'' |
? | REL606 | 1306336 = | 57 (0.630) | intergenic (‑97/+274) | cls/kch | cardiolipin synthetase/voltage‑gated potassium channel |
Only 100 of 121 total aligned reads displayed.
GACGGGCTCTGCGTTCGGCAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTAC > REL606/462483‑462551 | gACGGGCTCTGCGTTCGGCAACCATCTCATGTAgc > 1:16333251/1‑35 (MQ=255) gACGGGCTCTGCGTTCGGCAACCATCTCATGTAgc > 1:11733163/1‑35 (MQ=255) gACGGGCTCTGCGTTCGGCAACCATCTCACGTAgc > 1:8628879/1‑35 (MQ=255) gACGGGCTCTGCGTTCGGCAACCATCTCACGTAgc > 1:4137314/1‑35 (MQ=255) gACGGGCTCTGCGTTCGGCAACCATCTCACGTAgc > 1:16306664/1‑35 (MQ=255) gACGGGCTCTGCGTTCGGCAACCATCTCACGTAgc < 1:14991206/35‑1 (MQ=255) gACGGGCTCTGCGTTCGGCAACCATCTCACGTAgc > 1:14437187/1‑35 (MQ=255) gACGGGCTCTGCGTTCGGCAACAATCTCACGTAgc < 1:10465032/35‑1 (MQ=255) aCGGGCTCTGCGTTCGGCAACCATCTCACGTAgcc < 1:9190738/35‑1 (MQ=255) aCGGGCTCTGCGTTCGGCAACCATCTCACGTAgcc < 1:14143875/35‑1 (MQ=255) aCGGGCTCTGCGTTCGGCAACCATCTCACGCAgcc > 1:18777672/1‑35 (MQ=255) cGGGCTCTGCGTTCGGCAACCATCTCACGTAgccg > 1:18294283/1‑35 (MQ=255) cGGGCTCTGCGTTCGGCAACCATCTCACGTAgccg > 1:10218932/1‑35 (MQ=255) cGGGCTCTGCGTTCGGCAACCATCTCACGTAgccg > 1:11138795/1‑35 (MQ=255) gggCTCTGCGTTCGGCAACCATCTCACGTAgccgc > 1:2455678/1‑35 (MQ=255) gggCTCTGCGTTCGGCAACCATCTCACGTAgccgc > 1:20289500/1‑35 (MQ=255) gggCTCTGCGTTCGGCAACCATCTCACGTAgccga > 1:19812573/1‑34 (MQ=255) ggCTCTGCGTTCGGCAACCATCTCACGTAgccgcc > 1:12262163/1‑35 (MQ=255) ggCTCTGCGTTCGGCAACCATCTCACGTAgccgcc > 1:10923024/1‑35 (MQ=255) ggCTCTGCGTTCGGCAACCATCTCACGTAgccgcc > 1:2290487/1‑35 (MQ=255) gCTCTGCGTTCGGCAACCATCTCACGTAGccgccg > 1:1392165/1‑35 (MQ=255) ataacagaatggtcattataaccccgcccccgccg < 1:12017805‑M1/6‑1 (MQ=255) ctctGCGTTCGGCAACCATCTCACGTAgccgccac > 1:12088316/1‑33 (MQ=255) tctGCGTTCGGCAACCATCTCACGTAGCCGCCGCt > 1:1589270/1‑35 (MQ=255) tctGCGTTCGGCAACCATCTCACGTAGCCGCCGCt > 1:6723811/1‑35 (MQ=255) tctGCGTTCGGCAACCATCTCACGTAGCCGCCGCt > 1:12663821/1‑35 (MQ=255) ctGCGTTCGGCAACCATCTCACGTAGCCGCCGCTc > 1:19837572/1‑35 (MQ=255) ctGCGTTCGGCAACCATCTCACGTAGCCGCCGCTc > 1:2341782/1‑35 (MQ=255) ctGCGTTCGGCAACCATCTCACGTAGCCGCCGCTc > 1:2747119/1‑35 (MQ=255) gCGTTCGGCAACCATCTCACGTAGCCGCCGCTcca > 1:1165108/1‑33 (MQ=255) gCGTTCGGCAACCATCTCACGTAGCCGCCGCTCaa > 1:17506263/1‑35 (MQ=255) gTTCGGCAACCATCTCACGTAGCCGCCGCTCaaaa > 1:2164518/1‑35 (MQ=255) gTTCGGCAACCATCTCACGTAGCCGCCGCTCaaaa > 1:2149852/1‑35 (MQ=255) gTTCGGCAACCATCTCACGTAGCCGCCGCTCaaaa > 1:2983731/1‑35 (MQ=255) gTTCGGCAACCATCTCACGTAGCCGCCGCTCaaaa > 1:6574620/1‑35 (MQ=255) gTTCGGCAACCATCTCACGTAGCCGCCGCTCaaaa > 1:730911/1‑35 (MQ=255) ttCGGCAACCATCTCACGTAGCCGCCGCTCAAAAt > 1:13600891/1‑35 (MQ=255) ttCGGCAACCATCTCACGTAGCCGCCGCTCAAAAt > 1:10219804/1‑35 (MQ=255) cGGCAACCATCTCACGTAGCCGCCGCTCAAAATcc > 1:2404453/1‑35 (MQ=255) cGGCAACCATCTCACGTAGCCGCCGCTCAAAATcc > 1:16905279/1‑35 (MQ=255) cGGCAACCATCTCACGTAGCCGCCGCTCAAAATcc > 1:10341583/1‑35 (MQ=255) cGGCAACCATCTCACGTAGCCGCCGCTCAAAATcc > 1:14790308/1‑35 (MQ=255) ggCAACCATCTCACGTAGCCGCCGCTCAAAATCCt > 1:10965513/1‑35 (MQ=255) ggCAACCATCTCACGTAGCCGCCGCTCAAAATCCt > 1:15364511/1‑35 (MQ=255) ggCAACCATCTCACGTAGCCGCCGCTCAAAATCCt > 1:15458929/1‑35 (MQ=255) ggCAACCATCTCACGTAGCCGCCGCTCAAAATCCt > 1:15965995/1‑35 (MQ=255) ggCAACCATCTCACGTAGCCGCCGCTCAAAATCCt > 1:12894653/1‑35 (MQ=255) aaCCATCTCACGTAGCCGCCGCTCAAAATCCTGAt > 1:9174463/1‑35 (MQ=255) aaCCATCTCACGTAGCCGCCGCTCAAAATCCTGAt > 1:16665827/1‑35 (MQ=255) aaCCATCTCACGTAGCCGCCGCTCAAAATCCTGAt > 1:12728765/1‑35 (MQ=255) aCCATCTCACGTAGCCGCCGCTCAAAATCCTGATg > 1:113059/1‑35 (MQ=255) ccATCTCACGTAGCCGCCGCTCAAAATCCTGATGc > 1:8982065/1‑35 (MQ=255) cATCTCACGTAGCCGCCGCTCAAAATCCTGATGCt > 1:14065751/1‑35 (MQ=255) cATCTCACGTAGCCGCCGCTCAAAATCCTGATGCt > 1:14213753/1‑35 (MQ=255) cATCTCACGTAGCCGCCGCTCAAAATCCTGATGCt > 1:765364/1‑35 (MQ=255) cATCTCACGTAGCCGCCGCTCAAAATCCTGATGCt > 1:8841636/1‑35 (MQ=255) aTCTCACGTAGCCGCCGCTCAAAATCCTGATGCTg > 1:5534191/1‑35 (MQ=255) tctcACGTAGCCGCCGCTCAAAATCCTGATGCTGa > 1:17611076/1‑35 (MQ=255) tcccccgcccCCGCCGCTCAAAATCCTGATGCTGa > 1:8871800‑M1/11‑35 (MQ=255) tcccccccccCCGCCGCTCAAAATCCTGATGCTGa > 1:3438533‑M1/11‑35 (MQ=255) ctcACGTAGCCGCCGCTCAAAATCCTGATGCTGaa > 1:6195090/1‑35 (MQ=255) ctcACGTAGCCGCCGCTCAAAATCCTGATGCTGaa > 1:7371824/1‑35 (MQ=255) cccccgcccCCGCCGCTCAAAATCCTGATGCTGaa > 1:7863980‑M1/10‑35 (MQ=255) cccccccccCCGCCGCTCAAAATCCTGATGCTGaa > 1:2714542‑M1/10‑35 (MQ=255) tcACGTAGCCGCCGCTCAAAATCCTGATGCTGAAt > 1:19716301/1‑35 (MQ=255) ccccgcccCCGCCGCTCAAAATCCTGATGCTGAAt > 1:2793682‑M1/9‑35 (MQ=255) ccccgcccCCGCCGCTCAAAATCCTGATGCTGAAt > 1:9474490‑M1/9‑35 (MQ=255) cACGTGGCCGCCGCTCAAAATCCTGATGCTGAATa < 1:18900951/35‑1 (MQ=255) cACGTAGCCGCCGCTCAAAATCCTGATGCTGAATa > 1:15301708/1‑35 (MQ=255) cACGTAGCCGCCGCTCAAAATCCTGATGCTGAATa > 1:16010320/1‑35 (MQ=255) cACGTAGCCGCCGCTCAAAATCCTGATGCTGAATa > 1:17980785/1‑35 (MQ=255) ccgtccCCGCCGCTCAAAATCCTGATGCTGAATAc > 1:14868059‑M1/7‑35 (MQ=255) ccccccCCGCCGCTCAAAATCCTGATGCTGAATAc > 1:13033854‑M1/7‑35 (MQ=255) aCGTAGCCGCCGCTCAAAATCCTGATGCTGAATAc > 1:928000/1‑35 (MQ=255) aCGTAGCCGCCGCTCAAAATCCTGATGCTGAATAc > 1:4206999/1‑35 (MQ=255) aCGTAGCCGCCGCTCAAAATCCTGATGCTGAATAc > 1:5601989/1‑35 (MQ=255) gtgccCCGCCGCTCAAAATCCTGATGCTGAATACg > 1:4482473‑M1/6‑35 (MQ=255) cgtccCCGCCGCTCAAAATCCTGATGCTGAATACg > 1:17459896‑M1/6‑35 (MQ=255) gtacCCGCCGCTCAAAATCCTGATGCTGAATACGt > 1:849742‑M1/5‑35 (MQ=255) gcggccgccGCTCAAAATCCTGATGCTGAATACGt < 1:14510747/32‑1 (MQ=255) gcccCCGCCGCTCAAAATCCTGATGCTGAATACGt > 1:4601477‑M1/5‑35 (MQ=255) gTAGCCGCCGCTCAAAATCCTGATGCTGAATACGt > 1:11196298/1‑35 (MQ=255) gTAGCCGCCGCTCAAAATCCTGATGCTGAATACGt > 1:15997735/1‑35 (MQ=255) gTAGCCGCCGCTCAAAATCCTGATGCTGAATACGt > 1:16454661/1‑35 (MQ=255) gTAGCCGCCACTCAAAATCCTGATGCTGAATACGt > 1:3880184/1‑35 (MQ=255) tccCCGCCGCTCAAAATCCTGATGCTGAATACGtt > 1:19625245‑M1/4‑35 (MQ=255) tAGCCGCCGCTCAAAATCCTGATGCTGAATACGtt > 1:7660347/1‑35 (MQ=255) tAGCCGCCGCTCAAAATCCTGATGCTGAATACGtt > 1:2968061/1‑35 (MQ=255) cccCCGCCGCTCAAAATCCTGATGCTGAATACGtt > 1:18008319‑M1/4‑35 (MQ=255) ccCCGCCGCTCAAAATCCTGATGCTGAATACGttt > 1:343702‑M1/3‑35 (MQ=255) aGCCGCCGCTCAAAATCCTGATGCTGAATACGttt > 1:2039523/1‑35 (MQ=255) aGCCGCCGCTCAAAATCCTGATGCTGAATACGttt > 1:161703/1‑35 (MQ=255) gccgccGCTCAAAATCCTGATGCTGAATACGTTTa > 1:16365884/1‑35 (MQ=255) gccgccGCTCAAAATCCTGATGCTGAATACGTTTa > 1:4495807/1‑35 (MQ=255) gccgccGCTCAAAATCCTGATGCTGAATACGTTTa > 1:4404550/1‑35 (MQ=255) gccgccGCTCAAAATCCTGATGCTGAATACGTTTa > 1:1030913/1‑35 (MQ=255) cCCGCCGCTCAAAATCCTGATGCTGAATACGTTTa > 1:19165909‑M1/2‑35 (MQ=255) cCCGCCGCTCAAAATCCTGATGCTGAATACGTTTa > 1:244715‑M1/2‑35 (MQ=255) CCGCCGCTCAAAATCCTGATGCTGAATACGTTTAc > 1:1383098‑M1/1‑35 (MQ=255) CCGCCGCTCAAAATCCTGATGCTGAATACGTTTAc < 1:1153317‑M1/35‑1 (MQ=255) | GACGGGCTCTGCGTTCGGCAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTAC > REL606/462483‑462551 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |