New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2197349 | 85 (0.830) | 22 (0.240) | 7/42 | NT | 18.7% | coding (659/1992 nt) | cirA | ferric iron‑catecholate outer membrane transporter |
? | REL606 | 3882314 = | 133 (1.290) | coding (104/816 nt) | atpB | F0F1 ATP synthase subunit A |
CCTTCAATACGCGGCGTTTCTCCGGTATCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2197316‑2197349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGGGTTTTGTGG > REL606/3882314‑3882327 ||| CCTTCAATACGCGGCGTTTCTCCGGTATCGGTGGG > 1:10766906/1‑35 CCTTCAATACGCGGCGTTTCTCCGGTATCGGTGGG > 1:3011730/1‑35 CTTCAATACGCGGCGTTTCTCCGGTATCGGTGGGG > 1:11245169/1‑35 TTCAATACGCGGCGTTTCTCCGGTATCGGTGGGGG > 1:16395578/1‑35 TCAATACGCGGCGTTTCTCCGGTATCGGTGGGGGG > 1:118386/1‑35 TCAATACGCGGCGTTTCTCCGGTATCGGTGGGGGG > 1:13507512/1‑35 TCAATACGCGGCGTTTCTCCGGTATCGGTGGGGGG > 1:2531198/1‑35 AATACGCTGCGTTTCTCCGGTATCGGTGGGGGGGG > 1:17530743/1‑35 AATACGCGGCGTTTCTCCGGTATCGGTGGGGGGGG > 1:9582294/1‑35 ATACGCGGCGTTTCTCCGGTATCGGTGGGGGGGGG > 1:15071939/1‑35 TACGCGGCGTTTCTCCGGTATCGGTGGGGGGTGGG > 1:6029570/1‑35 TACGCGGCGTTTCTCCGGTATCGGTGGGGGGGGGG > 1:5183822/1‑35 TACGCGGCGTTTCTCCGGTATCGGTGGGGGGGGGG > 1:5863021/1‑35 TACGCGGCGTTTCTCCGGTATCGGTGGGGGGGGGG > 1:8014799/1‑35 TACGCGGCGTTTCTCCGGTATCGGTGGGGGGGGGG > 1:18592978/1‑35 ACGCGGCGTTTCTCCGGTATCGGTGGGGGGTGGGG > 1:4975451/1‑35 ACGCGGCGTTTCTCCGGTATCGGTGGGGGGGGGGG > 1:5705668/1‑35 ACGCGGCGTTTCTCCGGTATCGGTGGGCGGGGGGG > 1:15505449/1‑35 CGCGGCGTTTCTCCGGTATCGGTGGGGGGGGGGtg > 1:1680822/1‑33 CGCGGCGTTTCTCCGGTATCGGTGGGGGGGGGGGg > 1:19308993/1‑34 CGCGGCGTTTCTCCGGTATCGGTGGGGGGGGGGGg > 1:15295098/1‑34 CGCGGCGTTTCTCCGGTATCGGTGGGGGGGGGGGT > 1:15205155/1‑35 CGCGGCGTTTCTCCGGTATCGGTGGGGGGGGGGGT > 1:16468133/1‑35 GCGGCGTTTCTCCGGTATCGGTGGGGGGGTGGGTT > 1:1966828/1‑35 GCGGCGTTTCTCCGGTATCGGTGGGGGGGGGGGTT > 1:1832896/1‑35 GCGGCGTTTCTCCGGTATCGGTGGGGGGGGGGGTT > 1:18890271/1‑35 GCGGCGTTTCTCCGGTATCGGTGGGGGGGGGGGTT > 1:5344783/1‑35 CGGCGTTTCTCCGGTATCGGTGGGGGGGGGGGTTT > 1:6302387/1‑35 CGGCGTTTCTCCGGTATCGGTGGGGGGGGGGGTTT > 1:14341634/1‑35 CGGCGTTTCTCCGGTATCGGTGGGGGGGGGGGTTT > 1:16810126/1‑35 CGGCGTTTCTCCGGTATCGGTGGGGGGGGGGGGTT > 1:14752042/1‑35 GGCGTTTCTCCGGTATCGGTGGGGGGGGGGGTTTT > 1:18246582/1‑35 GGCGTTTCTCCGGTATCGGTGGGGGGGGGGGGTTT > 1:5101918/1‑35 GCGTTTCTCCGGTATCGGTGGGGGGGGGGGTTTTc > 1:6402107/1‑34 CGTTTCTCCGGTATCGGTGGGGGGGGGGGTTTTtt > 1:8144090/1‑33 GTTTCTCCGGTATCGGTGGGGGGGGGGGTTTTGgg > 1:19158355/1‑33 GTTTCTCCGGTATCGGTGGGGGGGGGGGTTTTGTG > 1:3213615/1‑35 TTTCTCCGGTATCGGTGGGGGGGGGGGTTTTGTGG > 1:3069534/1‑35 ||| CCTTCAATACGCGGCGTTTCTCCGGTATCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2197316‑2197349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGGGTTTTGTGG > REL606/3882314‑3882327 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |