New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2998284 =85 (0.830)9 (0.110) 4/40 NT 12.9% intergenic (+49/‑483) ECB_02798/yeeP conserved hypothetical protein/b1999; predicted GTP‑binding protein
?REL606 3832612 = 51 (0.600)coding (748/1149 nt) dgoD galactonate dehydratase

Only 100 of 188 total aligned reads displayed.

TATCTCCGTGAGTCCCCCGCCACCTTTCCGGTGTGCGGGGGTTTTGTCTTTTTTCACCGGGAATACATG  >  REL606/2998250‑2998318
                                  |                                  
tcacgcttcgattttaaacgcgtgctggaggcagg                                    >  1:11770032‑M1/35‑35 (MQ=255)
tcacgcttcgattttaaacgcgtgctggaggcagg                                    >  1:8979146‑M1/35‑35 (MQ=255)
tatCTCCGTGAGTCCCCCGCCACCTTTCCGGtgtg                                    <  1:2167536/35‑1 (MQ=255)
tatCTCCGTGAGTCCCCCGCCACCTTTCCGGtgtg                                    <  1:5443803/35‑1 (MQ=255)
tatCTCCGTGAGTCCCCCGCCACCTTTCCGGtgtg                                    <  1:9566194/35‑1 (MQ=255)
 cacgcttcgattttaaacgcgtgctggaggcaggc                                   >  1:3890898‑M1/34‑35 (MQ=255)
 cacgcttcgattttaaacgcgtgctggaggcaggc                                   <  1:6601392‑M1/2‑1 (MQ=255)
 cacgcttcgattttaaacgcgtgctggaggcaggc                                   <  1:15645860‑M1/2‑1 (MQ=255)
 cacgcttcgattttaaacgcgtgctggaggcaggc                                   <  1:857860‑M1/2‑1 (MQ=255)
 atCTCCGTGAGTCCCCCGCCACCTTTCCGGTGTGc                                   <  1:6734105/35‑1 (MQ=255)
 atCTCCGTGAGTCCCACGCCACCTTTCCGGTGTGc                                   <  1:19427628/35‑1 (MQ=255)
  tctcCGTGAGTCCCCCGCCACCTTTCCGGTGTGCg                                  >  1:11931961/1‑35 (MQ=255)
  tctcCGTGAGTCCCCCGCCACCTTTCCGGTGTGCg                                  >  1:19157229/1‑35 (MQ=255)
  acgcttcgattttaaacgcgtgctggaggcagGCg                                  <  1:12441920‑M1/3‑1 (MQ=255)
  acgcttcgattttaaacgcgtgctggaggcagGCg                                  <  1:12565753‑M1/3‑1 (MQ=255)
  acgcttcgattttaaacgcgtgctggaggcagGCg                                  >  1:14929973‑M1/33‑35 (MQ=255)
   ctcCGTGAGTCCCCCGCCACCTTTCCGGTGTGCgg                                 <  1:16222845/35‑1 (MQ=255)
   cgcttcgattttaaacgcgtgctggaggcaggctg                                 <  1:6871368‑M1/4‑3 (MQ=255)
   cgcttcgattttaaacgcgtgctggaggcagGCgg                                 >  1:14665207‑M1/32‑35 (MQ=255)
    tcCGTGAGTCCCCCGCCACCTTTCCGGTGTGCggg                                <  1:15539830/35‑1 (MQ=255)
    gcttcgattttaaacgcgtgctggaggcagGCggg                                <  1:10462770‑M1/5‑1 (MQ=255)
     cttcgattttaaacgcgtgctggaggcagGCgggg                               <  1:1961231‑M1/6‑1 (MQ=255)
     ccGTGAGTCCCCCGCCACCTTTCCTGTGTGCgggg                               >  1:14564545/1‑35 (MQ=255)
     ccGTGAGTCCCCCGCCACCTTTCCGGTGTGCgggg                               >  1:15119517/1‑35 (MQ=255)
     ccGTGAGTCCCCCGCCACCTTTCCGGTGTGCgggg                               >  1:15440368/1‑35 (MQ=255)
     ccGTGAGTCCCCCGCCACCTTTCCGGTGTGCgggg                               >  1:6621540/1‑35 (MQ=255)
      ttcgattttaaacgcgtgctggaggcagGCggggg                              <  1:13987819‑M1/7‑1 (MQ=255)
      cGTGAGTCCCCCGCCACCTTTCCGGTGTTCggggg                              >  1:4930781/1‑35 (MQ=255)
      cGTGAGTCCCCCGCCACCTTTCCGGTGTGCggggg                              >  1:309307/1‑35 (MQ=255)
       tcgattttaaacgcgtgctggaggcagGcgggggc                             <  1:14204878‑M1/8‑2 (MQ=255)
       tcgattttaaacgcgtgctggaggcagGCGGGGGt                             <  1:20462952‑M1/8‑1 (MQ=255)
       tcgattttaaacgcgtgctggaggcagGCGGGGGt                             <  1:10052074‑M1/8‑1 (MQ=255)
       gTGAGTCCCCCGCCACCTTTCCGGTGTGCGGGGGt                             >  1:2833519/1‑35 (MQ=255)
        tGAGTCCCCCGCCACCTTTCCGGTGTGCGGGGGtt                            >  1:19977711/1‑35 (MQ=255)
        cgattttaaacgcgtgctggaggcaggcggggttt                            <  1:4076652‑M1/9‑4 (MQ=255)
        cgattttaaacgcgtgctggaggcagGGGGGGGtt                            <  1:18282012‑M1/9‑1 (MQ=255)
        cgattttaaacgcgtgctggaggcagGCGGGGGtt                            <  1:6075725‑M1/9‑1 (MQ=255)
        cgattttaaacgcgtgctggaggcagGCGGGGGtt                            <  1:11468886‑M1/9‑1 (MQ=255)
         gattttaaacgcgtgctggaggcagGGGGGGGttt                           <  1:6617621‑M1/10‑1 (MQ=255)
         gattttaaacgcgtgctggaggcagGCGGGGGttt                           <  1:8381131‑M1/10‑1 (MQ=255)
         gAGTCCCCCGCCACCTTTCCGGTGTGCGGGGGttt                           >  1:11194741/1‑35 (MQ=255)
          attttaaacgcgtgctggaggcagGCGGgggtgtg                          <  1:14471366‑M1/11‑4 (MQ=255)
          attttaaacgcgtgctggaggcagGCGGGGgtttc                          <  1:1095693‑M1/11‑2 (MQ=255)
          aGTCCCCCGCCACCTTTCCGGTGTGCGGGGGtttt                          <  1:1278928/35‑1 (MQ=255)
          aGTCCCCCGCCACCTTTCCGGTGTGCGGGGGtttt                          >  1:17480613/1‑35 (MQ=255)
             cccccGCCACCTTTCCGGTGTGCGGGGGTTTTGTc                       >  1:8097220/1‑35 (MQ=255)
             cccccGCCACCTTTCCGGTGTGCGGGGGTTTTGTc                       <  1:7717203/35‑1 (MQ=255)
              ccccTCCACCTTTCCGGTGTGCGGGGGTTTTGTCt                      >  1:1802596/1‑35 (MQ=255)
               cccGCCACCTTTCCGGTGTGCGGGGGTTTTGTCtt                     <  1:13323447/35‑1 (MQ=255)
               cccGCCACCTTTCCGGTGTGCGGGGGTTTTGTCtt                     <  1:9521293/35‑1 (MQ=255)
               aaacgcgtgctggaggcagGCGGGGGTTttgtttt                     <  1:16907034‑M1/16‑4 (MQ=255)
               aaacgcgtgctggaggcagGCGGGGGGTTTGTCtt                     <  1:12761471‑M1/16‑1 (MQ=255)
                ccGCCACCTTTCCGGTGTGCGGGGGTTTTGTCttt                    <  1:15912162/35‑1 (MQ=255)
                ccGCCACCTTTCCGGTGTGCGGGGGTTTTGTCttt                    >  1:3154922/1‑35 (MQ=255)
                ccGCCACCTTTCCGGTGTGCGGGGGTTTTGTCttt                    >  1:19340799/1‑35 (MQ=255)
                ccGCCACCTTTCCGGTGTGCGGGGGTTTTGTCttt                    <  1:15018411/35‑1 (MQ=255)
                 cGCCACCTTTCCGGTGTGCGGGGGTTTTGTCtttt                   <  1:5987594/35‑1 (MQ=255)
                 cGCCACCTTTCCGGTGTGCGGGGGTTTTGTCtttt                   >  1:11354436/1‑35 (MQ=255)
                 cGCCACCTTTCCGGTGTGCGGGGGTTTTGTCtttt                   >  1:1952504/1‑35 (MQ=255)
                 cGCCACCTTTCCGGTGTGCGGGGGTTTTGTCtttt                   >  1:14610291/1‑35 (MQ=255)
                 acgcgtgctggaggcagGCGGGGGTTTTGTTtttt                   <  1:19159772‑M1/18‑1 (MQ=255)
                  gCCACCTTTCCTGTGTGCGGGGGTTTTGTCttttt                  >  1:9695017/1‑35 (MQ=255)
                  gCCACCTTTCCGGTGTGCGGGGGTTTTGTCttttt                  <  1:2601029/35‑1 (MQ=255)
                  gCCACCTTTCCGGTGTGCGGGGGTTTTGTCttttt                  <  1:12472568/35‑1 (MQ=255)
                   ccACCTTTCCGGTGTGCGGGGGTTTTGTCtttttt                 >  1:3447428/1‑35 (MQ=255)
                   ccACCTTTCCGGTGTGCGGGGGTTTTGTCtttttt                 <  1:14001343/35‑1 (MQ=255)
                    cACCTTTCCGGTGTGCGGGGGTTTTGTCTTTTTTc                <  1:5637547/35‑1 (MQ=255)
                    cACCTTTCCGGTGTGCGGGGGTTTTGTCTTTTTTc                <  1:19793353/35‑1 (MQ=255)
                    cACCTTTCCGGTGTGCGGGGGTTTTGTCTTTTTTc                >  1:5463873/1‑35 (MQ=255)
                      ccTTTCCGGTGTGCGGGGGTTTTGTCTTTTTTCAc              <  1:17339393/35‑1 (MQ=255)
                      ccTTTCCGGTGTGCGGGGGTTTTGTCTTTTTTCAc              <  1:848211/35‑1 (MQ=255)
                      ccTTTCCGGTGTGCGGGGGTTTTGTCTTTTTTCAc              <  1:18762655/35‑1 (MQ=255)
                       cTTTCCGGTGTGCGGGGGTTTTGTCTTTTTTCAcc             <  1:20020026/35‑1 (MQ=255)
                       cTTTCCGGTGTGCGGGGGTTTTGTCTTTTTTCAcc             <  1:12324600/35‑1 (MQ=255)
                        tttCCGGTGTGCGGGGGTTTTGTCTTTTTTCACCg            <  1:6394537/35‑1 (MQ=255)
                        tttCCGGTGTGCGGGGGTTTTGTCTTTTTTCACCg            <  1:15588538/35‑1 (MQ=255)
                         ttCCGGTGTGCGGGGGTTTTGTCTTTTTTCACCgg           >  1:14628960/1‑35 (MQ=255)
                         ttCCGGTGTGCGGGGGTTTTGTCTTTTTTCACCgg           <  1:10488928/35‑1 (MQ=255)
                          tCCGGTGTGCGGGGGTTTTGTCTTTTTTCACCggg          >  1:11872366/1‑35 (MQ=255)
                           ccGGTGTGCGGGGGTTTTGTCTTTTTTCACCGGGa         <  1:10006953/35‑1 (MQ=255)
                              gtgtGCGGGGGTTTTGTCTTTTTTCACCGGGAATa      <  1:6122462/35‑1 (MQ=255)
                              gtgtGCGGGGGTTTTGTCTTTTTTCACCGGGAATa      <  1:3363517/35‑1 (MQ=255)
                               tgtgCGGGGGTTTTGTCTTTTTTCACCGGGAATAc     >  1:13408986/1‑35 (MQ=255)
                               tgtgCGGGGGTTTTGTCTTTTTTCACCGGGAATAc     >  1:4516577/1‑35 (MQ=255)
                                gtgCGGGGGTTTTGTCTTTTTTCACCGGGAATACa    >  1:15818285/1‑35 (MQ=255)
                                gtgCGGGGGTTTTGTCTTTTTTCACCGGGAATACa    >  1:3060263/1‑35 (MQ=255)
                                 tgCGGGGGTTTTGTCTTTTTTCACCGGGAATACAt   >  1:17761016/1‑35 (MQ=255)
                                 tgCGGGGGTTTTGTCTTTTTTCACCGGGAATACAt   <  1:677271/35‑1 (MQ=255)
                                 tgCGGGGGTTTTGTCTTTTTTCACCGGGAATACAt   <  1:18515525/35‑1 (MQ=255)
                                 tgCGGGGGTTTTGTCTTTTTTCACCGGGAATACAt   <  1:18788006/35‑1 (MQ=255)
                                 tgCGGGGGTTTTGTCTTTTTTCACCGGGAATACAt   <  1:8544359/35‑1 (MQ=255)
                                 tgCGGGGGTTTTGTCTTTTTTCACCGGGAATACAt   <  1:19276954/35‑1 (MQ=255)
                                 tgCGGGGGTTTTGTCTTTTTTCACCGGGAATACAt   <  1:2382144/35‑1 (MQ=255)
                                 tgCGGGGGTTTTGTCATTTTTCACCGGGAATACAt   >  1:1528370/1‑35 (MQ=255)
                                  GCGGGGGTTTTGTCTTTTTTCACCGGGAATACATg  >  1:16422451‑M1/1‑35 (MQ=255)
                                  GCGGGGGTTTTGTCTTTTTTCACCGGGAATACATg  >  1:6535847‑M1/1‑35 (MQ=255)
                                  GCGGGGGTTTTGTCTTTTTTCACCGGGAATACATg  >  1:819918‑M1/1‑35 (MQ=255)
                                  GCGGGGGTTTTGTCTTTTTTCACCGGGAATACATg  >  1:17273989‑M1/1‑35 (MQ=255)
                                  GCGGGGGTTTTGTCTTTTTTCACCGGGAATACATg  >  1:11796275‑M1/1‑35 (MQ=255)
                                  GCGGGGGTTTTGTCTTTTTTCACCGGGAATACATg  >  1:2920309‑M1/1‑35 (MQ=255)
                                  |                                  
TATCTCCGTGAGTCCCCCGCCACCTTTCCGGTGTGCGGGGGTTTTGTCTTTTTTCACCGGGAATACATG  >  REL606/2998250‑2998318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.