New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 657260 | 81 (0.790) | 7 (0.090) | 5/38 | NT | 8.3% | coding (108/2583 nt) | leuS | leucyl‑tRNA synthetase |
? | REL606 | = 1387545 | 90 (1.110) | coding (247/966 nt) | ycjG | L‑Ala‑D/L‑Glu epimerase |
TGTAGTCGACCAGAAGGATAGGGAAGCATAGACAGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/657222‑657260 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCCC < REL606/1387545‑1387512 TGTAGTCGACCAGAAGGATAGGGAAGCATAGACAG > 1:7452043/1‑35 TGTAGTCGACCAGAAGGATAGGGAAGCATAGACAG > 1:13540160/1‑35 TGTAGTCGACCAGAAGGATAGGGAAGCATAGACAG < 1:12843282/35‑1 TGTAGTCGACCAGAAGGATAGGGAAGCATAGACAG > 1:2826203/1‑35 GTAGTCGACCAGAAGGATAGGGAAGCATAGACAGG > 1:7563/1‑35 GTAGTCGACCAGAAGGATAGGGAAGCATAGACAGG < 1:16495889/35‑1 GTAGTCGACCAGAAGGATAGGGAAGCATAGACAGG < 1:5693425/35‑1 GTAGTCGACCAGAAGGATAGGGAAGCATAGACAGG < 1:1526306/35‑1 GTAGTCGACCAGAAGGATAGGGAAGCATAGACAGG < 1:16128630/35‑1 TAGTCGACCAGAAGGATAGGGAAGCATAGACAGGC < 1:9850826/35‑1 TAGTCGACCAGAAGGATAGGGAAGCATAGACAGGC < 1:7844632/35‑1 TAGTCGACCAGAAGGATAGGGAAGCATAGACAGGC > 1:11096126/1‑35 TAGTCGACCAGAAGGATAGGGAAGCATAGACAGGC > 1:1423432/1‑35 TAGTCGACCAGAAGGATAGGGAAGCATAGACAGGC > 1:14274869/1‑35 AGTCGACCAGAAGGATAGGGAAGCATAGACAGGCA < 1:1560725/35‑1 AGTCGACCAGAAGGATAGGGAAGCATAGACAGGCA > 1:9939057/1‑35 AGTCGACCAGAAGGATAGGGAAGCATAGACAGGCA < 1:18671214/35‑1 GTCGACCAGAAGGATAGGGAAGCATAGACAGGCAG < 1:3199242/35‑1 GTCGACCAGAAGGATAGGGAAGCATAGACAGGCAG < 1:14025359/35‑1 GTCGACCAGAAGGATAGGGAAGCATAGACAGGCAG > 1:2088992/1‑35 GTCGACCAGAAGGATAGGGAAGCATAGACAGGCAG < 1:11796454/35‑1 TCGACCAGAAGGATAGGGAAGCATAGACAGGCAGG > 1:6238941/1‑35 TCGACCAGAAGGATAGGGAAGCATAGACAGGCAGG > 1:4296719/1‑35 TCGACCAGAAGGATAGGGAAGCATAGACAGGCAGG > 1:11359118/1‑35 GACCAGAAGGATAGGGAAGCATAGACAGGCAGGGg > 1:11982018/1‑34 GACCAGAAGGATAGGGAAGCATAGACAGGCAGGGA > 1:9210258/1‑35 GACCAGAAGGATAGGGAAGCATAGACAGGCAGGGA > 1:20049549/1‑35 ACCAGAAGGATAGGGAAGCATAGACAGGCAGGGga > 1:15024181/1‑33 ACCAGAAGGATAGGGAAGCATAGACAGGCAGGGAt > 1:15649170/1‑34 ACCAGAAGGATAGGGAAGCATAGACAGGCAGGGAt > 1:12121039/1‑34 CCAGAAGGATAGGGAAGCATAGACAGGCAGGGggg > 1:3095037/1‑32 CCAGAAGGATAGGGAAGCATAGACAGGCAGGGAGA > 1:16067298/1‑35 CCAGAAGGATAGGGAAGCATAGACAGGCAGGGAGA > 1:9671164/1‑35 CAGAAGGATAGGGAAGCATAGACAGGCAGGGAtac > 1:5394807/1‑32 CAGAAGGATAGGGAAGCATAGACAGGCAGGGAAAA > 1:2830553/1‑35 AGAAGGATAGGGAAGCATAGACAGGCAGGGAGAta > 1:17711492/1‑33 AAGGATAGGGAAGCATAGACAGGCAGGGAGAATTT > 1:6709734/1‑35 AGGATAGGGAAGCATAGACAGGCAGGGATAATTTT > 1:9985786/1‑35 AGGATAGGGAAGCATAGACAGGCAGGGATAATTTT > 1:18904275/1‑35 GGATAGGGAAGCATAGACAGGCAGGGAGAATTTTT > 1:15862310/1‑35 GGATAGGGAAGCATAGACAGGCAGGGAAAATTTTc > 1:11350965/1‑34 GATAGGGAAGCATAGACAGGCAGGGAGAATTCTTT > 1:596375/1‑35 GGCAGGGAGAATTTTTTGCAACTCCTCCCGTGTCA < 1:10851392/35‑1 GGCAGGGAGAATTTTTTGCAACTCCTCCCGTGTCA > 1:12315962/1‑35 GGCAGGGAGAATTTTTTGCAACTCCTCCCGTGTCA > 1:13072460/1‑35 GGCAGGGAGAATTTTTTGCAACTCCTCCCGTGTCA > 1:7656110/1‑35 GGCAGGGAGAATTTTTTGCAACCCCTCCCGTGTCA < 1:9346379/35‑1 tCAGGGAGAATTTTTTGCAACTCCTCCCGTGTCAG < 1:18775573/34‑1 GCAGGGAGAATTTTTTGCAACTCCTCCCGTGTCAa > 1:16571801/1‑34 GCAGGGAGAATTTTTTGCAACTCCTCCCGTGTCAG < 1:15005318/35‑1 GCAGGGAGAATTTTTTGCAACTCCTCCCGTGTCAG > 1:3650383/1‑35 GCAGGGAGAATTTTTTGCAACTACTCCCGTGTCAG < 1:6660800/35‑1 CAGGGAGAATTTTTTGCAACTCCTCCCGTGTCAGC > 1:13702393/1‑35 CAGGGAGAATTTTTTGCAACTCCTCCCGTGTCAGC < 1:3088808/35‑1 CAGGGAGAATTTTTTGCAACTCCTCCCGTGTCAGC > 1:12809220/1‑35 CAGGGAGAATTTTTTGCAACTCCTCCCGTGTCAGC > 1:8184974/1‑35 CAGGGAGAATTTTTTGCAACTCCTCCCGTGTCAGC > 1:9091187/1‑35 AGGGGGAATTTTTTGCAACTCCTCCCGTGTCAGCC < 1:1171998/35‑1 AGGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCC < 1:20576913/35‑1 AGGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCC > 1:2492756/1‑35 AGGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCC < 1:1760563/35‑1 AGGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCC > 1:14439455/1‑35 AGGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCC > 1:15269112/1‑35 AGGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCC > 1:15154243/1‑35 GGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCCC > 1:8167881/1‑35 GGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCCC > 1:9281291/1‑35 GGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCCC < 1:15583574/35‑1 GGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCCC < 1:9355773/35‑1 GGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCCC < 1:15175959/35‑1 TGTAGTCGACCAGAAGGATAGGGAAGCATAGACAGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/657222‑657260 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagGGAGAATTTTTTGCAACTCCTCCCGTGTCAGCCC < REL606/1387545‑1387512 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |