New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 594300 = | 32 (0.310) | 8 (0.110) | 5/34 | NT | 13.7% | coding (902/2241 nt) | fepA | iron‑enterobactin outer membrane transporter |
? | REL606 | = 3534924 | 78 (1.070) | coding (8/1497 nt) | ftsY | fused Signal Recognition Particle (SRP) receptor: membrane binding protein/conserved protein |
AATACCAACTCCGATTCCTATACCCGCTCGAAATATGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/594340‑594300 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgaAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGGG < REL606/3534924‑3534891 AATACCAACTCCGATTCCTATACCCGCTCGAAATA > 1:4993016/1‑35 AATACCAACTCCGATTCCTATACCCGCTCGAAATA > 1:2617048/1‑35 AATACCAACTCCGATTCCTATACCCGCTCGAAATA > 1:2410493/1‑35 AATACCAACTCCGATTCCTATACCCGCTCGAAATA < 1:2055068/35‑1 AATACCAACTCCGATTCCTATACCCGCTCGAAATA < 1:11363502/35‑1 AATACCAACTCCAATTCCTATACCCGCTCGAAATA < 1:3152874/35‑1 ATACCAACTCCGATTCCTATACCCGCTCGAAATAT < 1:11701989/35‑1 ATACCAACTCCGATTCCTATACCCGCTCGAAATAT > 1:7632905/1‑35 TACCAACTCCTATTCCTATACCCGCTCGAAATATG > 1:5938234/1‑35 TACCAACTCCGATTCCTATACCCGCTCGAAATATG > 1:4048541/1‑35 TACCAACTCCGATTCCTATACCCGCTCGAAATATG > 1:10875869/1‑35 TACCAACTCCGATTCCTATACCCGCTCGAAATATG < 1:20217610/35‑1 ACCAACTCCGATTCCTATACCCGCTCGAAATATGG > 1:5219821/1‑35 ACCAACTCCGATTCCTATACCCGCTCGAAATATGG > 1:4007786/1‑35 CCAACTCCGATTCCTATACCCGCTCGAAATATGGC < 1:10850951/35‑1 CCAACTCCGATTCCTATACCCGCTCGAAATATGGC < 1:12231739/35‑1 CCAACTCCGATTCCTATACCCGCTCGAAATATGGC > 1:7983204/1‑35 CCAACTCCGATTCCTATACCCGCTCGAAATATGGC > 1:13872665/1‑35 CCAACGCCGATTCCTATACCCGCTCGAAATATGGC < 1:1984026/35‑1 CAACTCCGATTCCTATACCCGCTCGAAATATGGCG > 1:5954762/1‑35 CAACTCCGATTCCTATACCCGCTCGAAATATGGCG > 1:8337960/1‑35 CAACTCCGATTCCTATACCCGCTCGAAATATGGCG > 1:10999437/1‑35 CAACTCCGATTCCTATACCCGCTCGAAATATGGCG < 1:9609494/35‑1 cACTCCGATTCCTATACCCGCTCGAAATATGGCGA > 1:12518768/2‑35 AACTCCGATTCCTATACCCTCTCGAAATATGGCGA > 1:8869761/1‑35 AACTCCGATTCCTATACCCGCTCGAAATATGGCGA < 1:15393489/35‑1 AACTCCGATTCCTATACCCGCTCGAAATATGGCGA < 1:11593321/35‑1 AACTCCGATTCCTATACCCGCTCGAAATATGGCGA > 1:7338924/1‑35 AACTCCGATTCCTATACCCGCTCGAAATATGGCGA < 1:1137864/35‑1 AACTCCGATTCCTATACCCGCTCGAAATATGGCGA > 1:18881853/1‑35 AACTCCGATTCCTATACCCGCTCGAAATATGGCGA < 1:10005560/35‑1 TCCGATTCCTATACCCGCTCGAAATATGGCGAAAa > 1:20128146/1‑34 TCCGATTCCTATACCCGCTCGAAATATGGCGAAAa > 1:12294432/1‑34 TCCGATTCCTATACCCGCTCGAAATATGGCGAAAa > 1:19328951/1‑34 TCCGATTCCTATACCCGCTCGAAATATGGCGAAAa > 1:16758680/1‑34 CCGATTCCTATACCCGCTCGAAATATGGCGAAAaa > 1:1750447/1‑33 CCGATTCCTATACCCGCTCGAAATATGGCGAAAaa > 1:16297001/1‑33 CGATTCCTATACCCGCTCGAAATATGGCGAAAAAA > 1:5445805/1‑35 CGATTCCTATACCCGCTCGAAATATGGCGAAAAAA > 1:2727194/1‑35 GATTCCTATACCCGCTCGAAATATGGCGAAAAAAA > 1:6569074/1‑35 GATTCCTATACCCGCTCGAAATATGGCGAAAAAAA > 1:10483898/1‑35 GATTCCTATACCCGCTCGAAATATGGCGAAAAAAA > 1:14904000/1‑35 GATTCCTATACCCGCTCGAAATATGGCGAAAAAAA > 1:13309026/1‑35 TTCCTATACCCGCTCGAAATATGGCGAAAAAAAAA > 1:11204005/1‑35 TCCTATACCCGCTCGAAATATGGCGAAAAAAAAAA > 1:11228723/1‑35 CCTATACCCGCTCGAAATATGGCGAAAAAAAAAAA > 1:3879818/1‑35 CTATACCCGCTCGAAATATGGCGAAAAAAAAAAAA > 1:9648395/1‑35 ATGGCGAAAGAAAAAAAACGTGGCTTTTTTTTCTG > 1:3796459/1‑35 ATGGCGAAAGAAAAAAAACGTGGCTTTTTTTTCTG > 1:16502806/1‑35 ATGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTG < 1:3206793/35‑1 ATGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTG < 1:15097099/35‑1 ATGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTG < 1:814584/35‑1 ATGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTG < 1:15297502/35‑1 ATGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTG < 1:19270934/35‑1 ATGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTG > 1:1855095/1‑35 TGGCGAAAGAAAAAAAACGTGGCTTTTTTTTCTGG > 1:17912394/1‑35 TGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGa > 1:20203490/1‑34 TGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGG > 1:10293839/1‑35 TGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGG < 1:3468440/35‑1 TGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGG < 1:6389033/35‑1 TGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGG > 1:6090654/1‑35 TGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGG > 1:4613755/1‑35 TGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGG < 1:19379184/35‑1 GGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTcgg > 1:19972854/1‑32 GGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGC < 1:9882835/35‑1 GGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGC > 1:10645185/1‑35 GGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGC < 1:1461539/35‑1 GGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGC > 1:15118720/1‑35 GGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGC < 1:15415941/35‑1 GGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGC > 1:18011728/1‑35 GGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGC > 1:5518081/1‑35 GGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGC > 1:3603600/1‑35 GCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCT < 1:19505578/35‑1 GCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCT > 1:14275192/1‑35 GCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCT > 1:3759764/1‑35 GCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCT < 1:1509726/35‑1 GCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCT < 1:3774837/35‑1 CGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTG > 1:5119356/1‑35 CGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTG < 1:4512341/35‑1 CGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTG > 1:9659227/1‑35 CGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTG < 1:16355989/35‑1 GAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGG < 1:3480114/35‑1 GAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGG < 1:3715045/35‑1 GAAAGAAAAAAAACGTGGCTTTTTTTCCCGGCTGG > 1:16208497/1‑35 AAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGGG < 1:25913/35‑1 AAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGGG < 1:8623773/35‑1 AAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGGG > 1:6715112/1‑35 AAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGGG < 1:20319642/35‑1 AAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGGG < 1:4191817/35‑1 AAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGGG > 1:1799850/1‑35 AAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGGG > 1:4397905/1‑35 AATACCAACTCCGATTCCTATACCCGCTCGAAATATGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/594340‑594300 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgaAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGGG < REL606/3534924‑3534891 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |