New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 82013 = | 70 (0.680) | 10 (0.160) | 3/30 | NT | 19.5% | coding (245/606 nt) | leuD | isopropylmalate isomerase small subunit |
? | REL606 | 3792209 = | 39 (0.610) | coding (315/414 nt) | ECB_03532 | hypothetical protein |
Only 100 of 116 total aligned reads displayed.
CAATGCCCAGGGCGCGTGCTCACGCGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGC > REL606/81979‑82047 | cAATGCCCAGGGCGCGTGCTCACGCGAAGAGCcac > 1:10674891/1‑35 (MQ=255) cAATGCCCAGGGCGCGTGCTCACGCGAAGAGCcac > 1:4671980/1‑35 (MQ=255) cAATGCCCAGGGCGCGTGCTCACGCGAAGAGCcac > 1:11425367/1‑35 (MQ=255) aaTGCCCAGGGCGCGTGCTCACGCGAAGAGCcaca > 1:7998492/1‑35 (MQ=255) aaTGCCCAGGGCGCGTGCTCACGCGAAGAGCcaca > 1:2685488/1‑35 (MQ=255) aaTGCCCAGGGCGCGTGCTCACGCGAAGAGCcaca > 1:9594698/1‑35 (MQ=255) aTGCCCAGGGCGCGTGCTCACGCGAAGAGCCACAg > 1:11117881/1‑35 (MQ=255) aTGCCCAGGGCGCGTGCTCACGCGAAGAGCCACAg > 1:5073646/1‑35 (MQ=255) aTGCCCAGGGCGCGTGCTCACGCGAAGAGCCACAg > 1:18342078/1‑35 (MQ=255) cccAGGGCGCGTGCTCACGCGAAGAGCCACAGCCg > 1:2048005/1‑35 (MQ=255) ccAGGGCGCGTGCTCACGCGAAGAGCCACAGCCGa > 1:16018777/1‑35 (MQ=255) ccAGGGCGCGTGCTCACGCGAAGAGCCACAGCCGa > 1:230969/1‑35 (MQ=255) cAGGGCGCGTGCTCACGCGAAGAGCCACAGCCGaa > 1:18536769/1‑35 (MQ=255) cAGGGCGCGTGCTCACGCGAAGAGCCACAGCCGaa > 1:188765/1‑35 (MQ=255) aGGGCGCGTGCTCACGCGAAGAGCCACAGCCGAAg > 1:11872333/1‑35 (MQ=255) aGGGCGCGTGCTCACGCGAAGAGCCACAGCCGAAg > 1:1474407/1‑35 (MQ=255) aGGGCGCGTGCTCACGCGAAGAGCCACAGCCGAAg > 1:3256773/1‑35 (MQ=255) gggCGCGTGCTCACGCGAAGAGCCACAGCCGAAgg > 1:1131525/1‑34 (MQ=255) gggCGCGTGCTCACGCGAAGAGCCACAGCCGAAGt > 1:6768608/1‑35 (MQ=255) gggCGCGTGCTCACGCGAAGAGCCACAGCCGAAGt > 1:4705584/1‑35 (MQ=255) ggCGCGTGCTCACGCGAAGAGCCACAGCCGAAggt > 1:7215296/1‑33 (MQ=255) gcgcGTGCTCACGCGAAGAGCCACAGCCGAAGttt > 1:2385334/1‑35 (MQ=255) gcgcGTGCTCACGCGAAGAGCCACAGCCGAAGttt > 1:20480087/1‑35 (MQ=255) gcgcGTGCTCACGCGAAGAGCCACAGCCGAAGttt > 1:19483950/1‑35 (MQ=255) gcgcGTGCTCACGCGAAGAGCCACAGCCGAAGttt > 1:19870400/1‑35 (MQ=255) gcgcGTGCTCACGCGAAGAGCCACAGCCGAAGttt > 1:14746708/1‑35 (MQ=255) gcgcGTGCTCACGCGAAGAGCCACAGCAGAAGttt > 1:12156372/1‑35 (MQ=255) cgcgTGCTCACGCGAAGAGCCACAGCCGAAGtttt > 1:1331353/1‑35 (MQ=255) gcttGCTCACGCGAAGAGCCACAGCCGAAGGTTtc > 1:6838938/4‑35 (MQ=38) gcgTGCTCACGCGAAGAGCCACAGCCGAAGTTTtc > 1:13873136/1‑35 (MQ=255) gcgTGCTCACGCGAAGAGCCACAGCCGAAGTTTtc > 1:13453575/1‑35 (MQ=255) gcgTGCTCACGCGAAGAGCCACAGCCGAAGTTTtc > 1:18447931/1‑35 (MQ=255) gcgTGCTCACGCGAAGAGCCACAGCCGAAGGTTtc > 1:805433/1‑35 (MQ=255) cgTGCTCACGCGAAGAGCCACAGCCGAAGTTTtct > 1:6298877/1‑35 (MQ=255) cgTGCTCACGCGAAGAGCCACAGCCGAAGTTTtct > 1:19967812/1‑35 (MQ=255) gTGCTCACGCGAAGAGCCACAGCCGAAGTTTtctc > 1:19774923/1‑35 (MQ=255) gTGCTCACGCGAAGAGCCACAGCCGAAGTTTtctc > 1:1682935/1‑35 (MQ=255) tGCTCACGCGAAGAGCCACAGCCGAAGTTTTCTCg > 1:9613997/1‑35 (MQ=255) tGCTCACGCGAAGAGCCACAGCCGAAGTTTTCTCg > 1:6987699/1‑35 (MQ=255) gCTCACGCGAAGAGCCACAGCCGAAGTTTTCTCGt > 1:3933698/1‑35 (MQ=255) gCTCACGCGAAGAGCCACAGCCGAAGTTTTCTCGt > 1:14935686/1‑35 (MQ=255) gCTCACGCGAAGAGCCACAGCCGAAGTTTTCTCGt > 1:12013179/1‑35 (MQ=255) gCTCACGCGAAGAGCCACAGCCGAAGTTTTCTCGt > 1:11909498/1‑35 (MQ=255) cTCACGCGAACAGCCACAGCCGAAGTTTTCTCGTg > 1:20423843/1‑35 (MQ=255) tCACGCGAAGAGCCACAGCCGAAGTTTTNNCNtnn > 1:6051291/1‑33 (MQ=38) tCACGCGAAGAGCCACAGCCGAAGTTTTCTCGTGc > 1:8543915/1‑35 (MQ=255) cACGCGAAGAGCCACAGCCGAAGTTTTCTCGTggc > 1:6571865/1‑33 (MQ=255) cACGCGAAGAGCCACAGCCGAAGGTTTCTCGTGcc > 1:19917313/1‑35 (MQ=255) aCGCGAAGAGCCACAGCCGAAGTTTTCTCGTGCCa > 1:3990923/1‑35 (MQ=255) aCGCGAAGAGCCACAGCCGAAGTTTTCTCGTGCCa > 1:3606223/1‑35 (MQ=255) cgcgAAGAGCCACAGCCGAAGTTTTCTCGTGcccg > 1:11091610/1‑33 (MQ=255) cgcgAAGAGCCACAGCCGAAGTTTTCTCGTGCCAg > 1:13527996/1‑35 (MQ=255) gcgAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGc > 1:6481020/1‑35 (MQ=255) gcgAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGc > 1:9804818/1‑35 (MQ=255) gcgAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGc > 1:5968539/1‑35 (MQ=255) gcgAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGc > 1:2846885/1‑35 (MQ=255) gcgAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGc > 1:12701490/1‑35 (MQ=255) cgAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCa > 1:2912064/1‑35 (MQ=255) cgAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCa > 1:11499720/1‑35 (MQ=255) cgAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCa > 1:5343917/1‑35 (MQ=255) gccccccccCAGCCGAAGTTTTCTCGTGCCAGCaa > 1:3193025‑M1/10‑35 (MQ=255) gAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCaa > 1:4067792/1‑35 (MQ=255) gAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCaa > 1:9903366/1‑35 (MQ=255) gAAGAGCCACAGCCGAAGGTTTCTCGTGCCAGCaa > 1:17801850/1‑35 (MQ=255) gcccccccCAGCCGAAGTTTTCTCGTGCCAGCaaa > 1:5673042‑M1/9‑35 (MQ=255) ccccccccCAGCCGAAGTTTTCTCGTGCCAGCaaa > 1:8243624‑M1/9‑35 (MQ=255) aaGAGCCACAGCCGAAGTTTTCTCGTGCCAGCaaa > 1:17833175/1‑35 (MQ=255) aaGAGCCACAGCCGAAGTTTTCTCGTGCCAGCaaa > 1:7565035/1‑35 (MQ=255) aaGAGCCACAGCCGAAGGTTTCTCGTGCCAGCaaa > 1:17160255/1‑35 (MQ=255) gccccccCAGCCGAAGTTTTCTCGTGCCAGCaaaa > 1:835127‑M1/8‑35 (MQ=255) cccccccCAGCCGAAGTTTTCTCGTGCCAGCaaaa > 1:7376667‑M1/8‑35 (MQ=255) agagCCACAGCCGAAGTTTTCTCGTGCCCGCaaaa > 1:2963859/1‑35 (MQ=255) agagCCACAGCCGAAGGTTTCTCGTGCCAGCaaaa > 1:2668962/1‑35 (MQ=255) agagCCACAGCCGAAGGTTTCTCGTGCCAGCaaaa > 1:20147994/1‑35 (MQ=255) gcccccCAGCCGAAGTTTTCTCGTGCCAGCAAAAt > 1:1756571‑M1/7‑35 (MQ=255) gcccccCAGCCGAAGTTTTCTCGTGCCAGCAAAAt > 1:18153296‑M1/7‑35 (MQ=255) gagCCACAGCCGAAGTTTTCTCGTGCCAGCAAAAt > 1:13952021/1‑35 (MQ=255) gagCCACAGCCGAAGTTTTCTCGTGCCAGCAAAAt > 1:8607275/1‑35 (MQ=255) ccccccCAGCCGAAGTTTTCTCGTGCCAGCAAAAt > 1:5622200‑M1/7‑35 (MQ=255) ccccccCAGCCGAAGTTTTCTCGTGCCAGCAAAAt > 1:3322749‑M1/7‑35 (MQ=255) ccccccCAGCCGAAGTTTTCTCGTGCCAGCAAAAt > 1:19010381‑M1/7‑35 (MQ=255) cgcccCAGCCGAAGTTTTCTCGTGCCAGCAAAATg > 1:1234235‑M1/6‑35 (MQ=255) cccccCAGCCGAAGTTTTCTCGTGCCAGCAAAATg > 1:3844906‑M1/6‑35 (MQ=255) agCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATg > 1:9683581/1‑35 (MQ=255) cccCAGCCGAAGTTTTCTCGTGCCAGCAAAATGGa > 1:786004‑M1/4‑35 (MQ=255) cccCAGCCGAAGTTTTCTCGTGCCAGCAAAATGGa > 1:9638748‑M1/4‑35 (MQ=255) ccACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGa > 1:13251158/1‑35 (MQ=255) ccACAGCCGAAGGTTTCTCGTGCCAGCAAAATGGa > 1:16023824/1‑35 (MQ=255) ccCAGCCGAAGTTTTCTCGTGCCAGCAAAATGGaa > 1:2513761‑M1/3‑35 (MQ=255) cacaGCCGAAGTTTTCTCGTGCCAGCAAAATGGaa > 1:3486337/1‑35 (MQ=255) cacaGCCGAAGTTTTCTCGTGCCAGCAAAATGGaa > 1:10581298/1‑35 (MQ=255) cacaGCCGAAGGTTTCTCGTGCCAGCAAAATGGaa > 1:18717879/1‑35 (MQ=255) cCAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAg > 1:918764‑M1/2‑35 (MQ=255) cCAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAg > 1:2336841‑M1/2‑35 (MQ=255) cCAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAg > 1:16785434‑M1/2‑35 (MQ=255) acaGCCGAAGTTTTCTCGTTCCAGCAAAATGGAAg > 1:5317218/1‑35 (MQ=255) acaGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAg > 1:9249825/1‑35 (MQ=255) CAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAgc > 1:7980116‑M1/1‑35 (MQ=255) CAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAgc > 1:2972325‑M1/1‑35 (MQ=255) CAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAgc > 1:13598698‑M1/1‑35 (MQ=255) | CAATGCCCAGGGCGCGTGCTCACGCGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGC > REL606/81979‑82047 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |